View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5352_high_7 (Length: 276)
Name: NF5352_high_7
Description: NF5352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5352_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 22271971 - 22272206
Alignment:
| Q |
21 |
ttgttttccctattaagaatatttatacctgaaaataatttcttaaatttataataagtataagtatccatcttaataacttcaaaccaaaagagagtta |
120 |
Q |
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| T |
22271971 |
ttgtttttcctattaaaaatatttatacctgaaaataatttcttaaatttataataaacataagtatccatcttaatcacttcaaaccaaaagagagttg |
22272070 |
T |
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| Q |
121 |
gtacaaacaatccattgatcagtcagagtcaaaccagaacaaacccaacaattgcatgagttcacttttgctattttgatctataaaacaatatatcttt |
220 |
Q |
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| T |
22272071 |
gtacaaataatccattgatcagtcagagtcgaaccaaaacaaacccaacaattgcatgagttcacttttgctattttgatctataaaacaatatatcttt |
22272170 |
T |
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| Q |
221 |
ttactagaagtgtcctttttaccatttatttactcc |
256 |
Q |
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||||||| |||||||||||||||||| || |||||| |
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| T |
22272171 |
ttactagtagtgtcctttttaccattaatctactcc |
22272206 |
T |
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