View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5353_low_2 (Length: 283)
Name: NF5353_low_2
Description: NF5353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5353_low_2 |
 | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0485 (1 HSPs) |
| | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0222 (1 HSPs) |
| | |
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| [»] scaffold0566 (1 HSPs) |
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|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0113 (1 HSPs) |
| | |
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| [»] scaffold1184 (1 HSPs) |
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Alignment Details
Target: scaffold0035 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 51962 - 52216
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51962 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
52061 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
52062 |
attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc |
52161 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52162 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
52216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 16327176 - 16327430
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16327176 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
16327275 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16327276 |
attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc |
16327375 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16327376 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
16327430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 9581707 - 9581453
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
9581707 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaata |
9581608 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||| ||||||| |
|
|
| T |
9581607 |
atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
9581508 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581507 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9581453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 9729559 - 9729305
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
9729559 |
ttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaata |
9729460 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||| ||||||| |
|
|
| T |
9729459 |
atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
9729360 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9729359 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9729305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 4311532 - 4311279
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4311532 |
ttgtacatgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaata |
4311433 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
4311432 |
attctccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
4311333 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||| || ||| |||||| |||||||| |
|
|
| T |
4311332 |
tcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgat |
4311279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 540168 - 540416
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
540168 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaatg |
540267 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| |||||||||||| || ||||||| |
|
|
| T |
540268 |
attctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
540361 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
540362 |
tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
540416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 8783498 - 8783752
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| ||||| ||||| || ||||| |
|
|
| T |
8783498 |
ttgtacatgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaata |
8783597 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
8783598 |
attctcctttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatcc |
8783697 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||| ||||||||||||||||| |||| || |||||||||| |||||||| |
|
|
| T |
8783698 |
ccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatgat |
8783752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 14223144 - 14223313
Alignment:
| Q |
106 |
caattagctctaataattctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataat |
205 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
14223144 |
caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat |
14223243 |
T |
|
| Q |
206 |
agttttcctctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
14223244 |
agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14223313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 23513873 - 23513729
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||| || | | |
|
|
| T |
23513873 |
tgtacctgtgggttagtgccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattga |
23513774 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||| |||||| |
|
|
| T |
23513773 |
ctctccactcatataggtaattgtgagaagggccatggattctaa |
23513729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 4462117 - 4462261
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| || ||||||||||||| ||||||||| ||||||||| | |
|
|
| T |
4462117 |
tgtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatga |
4462216 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|| || | |||||||||| ||||||||| || |||| ||||||| |
|
|
| T |
4462217 |
ttttctaatcatattggtcattgtgagtcggtccatgagttctaa |
4462261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 13741225 - 13741088
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||| ||||| |||||||||| | ||||| |||||||||| | |||||||||||||||||||||||||| |||| |||||| | || | | |
|
|
| T |
13741225 |
tgtacctgtggattagtgccaacataaacatagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattga |
13741126 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgg |
159 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||||| |
|
|
| T |
13741125 |
ctctccactcatattggtaattgtgagaagggccatgg |
13741088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 5395944 - 5395800
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
5395944 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
5395845 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
||||| |||| ||||||||||| || |||||| ||| |||||| |
|
|
| T |
5395844 |
cgctccactcattttggtaattgttagaagggtcgtggattctaa |
5395800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 10439748 - 10439892
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||| | | ||||||| || ||||||||||||||| |||| ||||| | || | | |
|
|
| T |
10439748 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattga |
10439847 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
10439848 |
ctctccactcatattggtaattgtgagaagggctatgggttctaa |
10439892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 12565807 - 12565670
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||| ||||| |||||||||| | ||||||| || ||||||||| |||| |||| ||||||| || | | |
|
|
| T |
12565807 |
tgtaccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattga |
12565708 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgg |
159 |
Q |
| |
|
|||||| |||||||||||||||| || |||| ||||| |
|
|
| T |
12565707 |
ctctccactcatattggtaattgttagaagggccatgg |
12565670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 12777913 - 12778170
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
12777913 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaata |
12778012 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||| |
|
|
| T |
12778013 |
attctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcc |
12778112 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgatgtc |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12778113 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtc |
12778170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 15024508 - 15024254
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||| ||||| | ||||||||||||| | ||||||||||||||| || |
|
|
| T |
15024508 |
ttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctatta |
15024409 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15024408 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcc |
15024309 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |
|
|
| T |
15024308 |
tcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgat |
15024254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 6813667 - 6813419
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6813667 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
6813568 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||| || ||||||| |||||||| |||||| |||| |||||||||||| || ||||||| |
|
|
| T |
6813567 |
attctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
6813474 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| |||||||||||||||||||||| |
|
|
| T |
6813473 |
tcttgatcccttgattcatactcacctcaaacttcttagcaataaaagtgatgat |
6813419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 20562153 - 20561936
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||| ||| | | ||||| |||||||||| | ||||||| || ||||||||||||||| |||| |||||| || | | |
|
|
| T |
20562153 |
tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20562054 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
20562053 |
ctctccactcatattggtaattgtgagaagggccatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20561955 |
T |
|
| Q |
222 |
cttgatcccttgattcaca |
240 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20561954 |
atttatccctttattcaca |
20561936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 20564461 - 20564244
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||| ||| | | ||||| |||||||||| | ||||||| || ||||||||||||||| |||| |||||| || | | |
|
|
| T |
20564461 |
tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20564362 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
20564361 |
ctctccactcatattggtaattgtgagaagggccatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20564263 |
T |
|
| Q |
222 |
cttgatcccttgattcaca |
240 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20564262 |
atttatccctttattcaca |
20564244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 20559845 - 20559628
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
|||| |||||||||||| |||||| ||| | | ||||| |||||||||| | ||||||| || ||||||||||||||| |||| |||||| || | | |
|
|
| T |
20559845 |
tgtatctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20559746 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
20559745 |
ctctccactcatattggtaattgtgagaagggccatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20559647 |
T |
|
| Q |
222 |
cttgatcccttgattcaca |
240 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20559646 |
atttatccctttattcaca |
20559628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 9362367 - 9362573
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| |||| ||||||| | ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
9362367 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattga |
9362463 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| ||||||||| |||||||| |||| ||||| |||||| || ||| |||||||| || | |||||||||||| |||||| |||| ||||| |
|
|
| T |
9362464 |
ctctccactcatattggggattgtgagaagggccatggattctaa-aaaaaacatggtagtgagggtttctaagtatagatagtagtttccctcaatcct |
9362562 |
T |
|
| Q |
222 |
cttgatccctt |
232 |
Q |
| |
|
|| ||||||| |
|
|
| T |
9362563 |
atttatccctt |
9362573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 13090217 - 13090358
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
13090217 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
13090313 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|| ||| ||||||||| ||||||||| |||| ||||| |||||| |
|
|
| T |
13090314 |
ctcaccactcatattgggaattgtgagaagggccatggattctaa |
13090358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 13096514 - 13096373
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| |||||| || | | |
|
|
| T |
13096514 |
tgtacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattga |
13096418 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| |||| |||| ||||||||| |||| ||||| |||||| |
|
|
| T |
13096417 |
ctctccactcatgttgggaattgtgagaagggccatggattctaa |
13096373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 3246922 - 3246968
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacct |
67 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
3246922 |
ttgtacctgtgggttagtacaaaaataaaacaaattttccaccacct |
3246968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 14687181 - 14687435
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
14687181 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaata |
14687280 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
14687281 |
attctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcc |
14687380 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
14687381 |
tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14687435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 42711184 - 42711434
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
42711184 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaata |
42711283 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||| ||||||| |
|
|
| T |
42711284 |
attctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
42711383 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtga |
271 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42711384 |
tcttgatcctttgattcacactcaccctaaacctcttagcaataaaagtga |
42711434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 15349253 - 15349501
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15349253 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
15349352 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| |||||||||||| || ||||||| |
|
|
| T |
15349353 |
attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
15349446 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
15349447 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
15349501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 11498023 - 11498233
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||||| | ||||||||||||||| |||| |||||| | | | | |
|
|
| T |
11498023 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattga |
11498122 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||||| |||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
11498123 |
ctctccactcatattggtaattgttagaagggtcatgaattctaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
11498222 |
T |
|
| Q |
222 |
cttgatccctt |
232 |
Q |
| |
|
|| ||||||| |
|
|
| T |
11498223 |
atttatccctt |
11498233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 158
Target Start/End: Original strand, 45240267 - 45240404
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaa-ttagctctaata |
120 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||||| | |||||| ||||||||| |||| ||| ||||| || | |
|
|
| T |
45240267 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg |
45240366 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatg |
158 |
Q |
| |
|
| |||||| ||||||||||||||||||| |||| |||| |
|
|
| T |
45240367 |
actctccactcatattggtaattgtgagaagggccatg |
45240404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 10629551 - 10629345
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||| ||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
10629551 |
tgtacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
10629455 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||| ||||| |||||| || ||| |||||||| || | |||||||||||| |||||| |||| ||||| |
|
|
| T |
10629454 |
ctctccactcatattgggaattgtgagaagggccatggattctaa-aaaaaacatggtagtgagggtttctaagtatagatagtagtttccctcaatcct |
10629356 |
T |
|
| Q |
222 |
cttgatccctt |
232 |
Q |
| |
|
|| ||||||| |
|
|
| T |
10629355 |
atttatccctt |
10629345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 18290824 - 18290680
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| | |||||||||| ||||||| || ||||||||||||||| |||| |||| || || | | |
|
|
| T |
18290824 |
tgtacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaataaatttgcattattga |
18290725 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
| |||| |||||||||||||||| || |||| | ||| |||||| |
|
|
| T |
18290724 |
atttccactcatattggtaattgttagaagggccgtggattctaa |
18290680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
| Q |
39 |
accaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataattctccattcatattgg |
138 |
Q |
| |
|
||||||||||| ||| ||||||||||||| ||| |||| ||||||| ||||||||||||| ||||| ||||||| ||| | | | |||| ||||||||| |
|
|
| T |
11918125 |
accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg |
11918223 |
T |
|
| Q |
139 |
taattgtgag |
148 |
Q |
| |
|
|||||||||| |
|
|
| T |
11918224 |
taattgtgag |
11918233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 23712116 - 23712370
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
23712116 |
ttgtacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaata |
23712215 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||| ||||||| |
|
|
| T |
23712216 |
atcctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
23712315 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
23712316 |
tcttgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgat |
23712370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 21282320 - 21282465
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaa-ttagctctaata |
120 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||||| | |||||| ||||||||| |||| ||| ||||| || | |
|
|
| T |
21282320 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg |
21282419 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
| |||||| ||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
21282420 |
actctccactcatattggtaattgtgagaagggttatggattctaa |
21282465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 20446255 - 20446399
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
20446255 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
20446354 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
20446355 |
ctctccactcatattggtaattgtgagaagggctatgagttctaa |
20446399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 18487473 - 18487617
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||| || |||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
18487473 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattga |
18487572 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| |||||||||||||||| | |||| ||||| |||||| |
|
|
| T |
18487573 |
ctctccactcatattggtaattgttataagggccatggattctaa |
18487617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 23602050 - 23602256
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
23602050 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
23602146 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|| ||| ||||||||| ||||||||| | || ||||| |||||| || ||| |||||||| || | |||||||||||| |||||| |||| ||||| |
|
|
| T |
23602147 |
ctcgccactcatattgggaattgtgagaaaggccatggattctaa-aaaaaacatggtagtgagggtttctaagtatagatagtagtttccctcaatcct |
23602245 |
T |
|
| Q |
222 |
cttgatccctt |
232 |
Q |
| |
|
|| ||||||| |
|
|
| T |
23602246 |
atttatccctt |
23602256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 24939334 - 24939193
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||| ||||||| || | ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
24939334 |
tgtacctgtgggttagtgccaacataa---aagttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
24939238 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|| ||| ||||||||| ||||||||| |||| ||||| |||||| |
|
|
| T |
24939237 |
ctcgccactcatattgggaattgtgagaagggccatggattctaa |
24939193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 24218633 - 24218516
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||| ||||||||||| ||||||||| | ||||| |||| ||||||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
24218633 |
tgtacatgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
24218537 |
T |
|
| Q |
122 |
ttctccattcatattggtaat |
142 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
24218536 |
ctctccactcatattggtaat |
24218516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 29566 - 29312
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
29566 |
ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatg |
29467 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| || ||||||| |
|
|
| T |
29466 |
attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc |
29367 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
29366 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
29312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 20001103 - 20000852
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
20001103 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
20001004 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||| || ||||||| |
|
|
| T |
20001003 |
attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc |
20000904 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
20000903 |
tcttgatcccttgattcacactcaccccaaa---cttagcaataaaagtgatgat |
20000852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 20040479 - 20040697
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| | | ||||| |||||||| ||| ||||||| || ||||||||||||||| |||| |||||| || | | |
|
|
| T |
20040479 |
tgtacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20040578 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
20040579 |
ctctccactcatattggtaattgtgagaagggccatgaattctaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20040678 |
T |
|
| Q |
222 |
cttgatcccttgattcaca |
240 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20040679 |
atttatccctttattcaca |
20040697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 21855186 - 21855327
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||| ||||||| |||||||||| | ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
21855186 |
tgtacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
21855282 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
21855283 |
ctctccactcatattggtaattgtgagaagggttatgggttctaa |
21855327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 17619545 - 17619412
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
17619545 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
17619449 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatg |
158 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||| |||| |
|
|
| T |
17619448 |
ctctccactcatattggaaattgtgagaagggccatg |
17619412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 11313 - 11568
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaatttt-ccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaat |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| ||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
11313 |
ttgtacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaat |
11412 |
T |
|
| Q |
120 |
aattctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatc |
219 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| |
|
|
| T |
11413 |
aattctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatc |
11512 |
T |
|
| Q |
220 |
ctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | |||||||||| |||||||| |
|
|
| T |
11513 |
ctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgat |
11568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 27045672 - 27045424
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27045672 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
27045573 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| |||||||||||| || ||||||| |
|
|
| T |
27045572 |
attctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
27045479 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
27045478 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
27045424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 232
Target Start/End: Original strand, 22626469 - 22626647
Alignment:
| Q |
55 |
ttttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataattctccattcatattggtaattgtgagtagggt |
154 |
Q |
| |
|
||||| |||||| ||||| ||||||| |||||||||||||||||| |||| |||||||| || | | |||||| ||||||||||||||||||| |||| |
|
|
| T |
22626469 |
ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaaggg- |
22626567 |
T |
|
| Q |
155 |
catgggttctaag--gaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcctcttgatccctt |
232 |
Q |
| |
|
||||| ||||||| || ||| |||||||| |||| ||||| |||||| |||||| |||| ||||| || ||||||| |
|
|
| T |
22626568 |
catggattctaagaaaaaaaacatggtagtgagggtatctaagtctagatagtagtttccctcaatcctatttatccctt |
22626647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 158
Target Start/End: Original strand, 21785853 - 21785986
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||| ||||||| |||| ||||||| || ||||||||||||| | |||| ||||||| || | | |
|
|
| T |
21785853 |
tgtacctgtgggttagtgccaacataa---aagttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagcattattga |
21785949 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatg |
158 |
Q |
| |
|
|||||| |||| |||||| |||| || |||| |||| |
|
|
| T |
21785950 |
ctctccactcatgttggtacttgttagaagggccatg |
21785986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 22062920 - 22063168
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22062920 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
22063019 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| ||||||| || ||||||| |||||||| |||||| |||| |||||||||||| || ||||||| |
|
|
| T |
22063020 |
attctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
22063113 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
22063114 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
22063168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 275
Target Start/End: Original strand, 19586983 - 19587222
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
19586983 |
ttgtacctgtgggttaataccaacataaatcaaattttccaccacctccaga---------------ttaggtagaataatcaaacaattagctctaata |
19587067 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcc |
220 |
Q |
| |
|
||||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
19587068 |
attctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcctctctatcc |
19587167 |
T |
|
| Q |
221 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| || |||||||||| |||||||| |
|
|
| T |
19587168 |
tcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgat |
19587222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 23519161 - 23519414
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||| |||||| ||| |||||||||| ||||||||||||| ||| | | |
|
|
| T |
23519161 |
tgtacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctattta |
23519260 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
| ||| |||||||||| ||||||| ||||||||||||| ||||||| |||| ||| |||| |||| ||||| |||||||||||| |||| ||||| |
|
|
| T |
23519261 |
ctttccgcacatattggtagttgtgagaagggtcatgggttataaggaaagacatggtattgagggtatctaagtctagataatagttcccctcaatcct |
23519360 |
T |
|
| Q |
222 |
cttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||| ||| | ||| | |||| |||||| || ||||||| || |||||||| |
|
|
| T |
23519361 |
attgacccccttgctcatattcactctaaacttcctagcaatgaaggtgatgat |
23519414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 18188979 - 18189123
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||| | |||||||||||||||||| |||| |||||||| || | | |
|
|
| T |
18188979 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattga |
18189078 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
18189079 |
ctctccactcatattggtaattgtgagaagggtcatggattctaa |
18189123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 17818320 - 17818194
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||| |||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
17818320 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
17818221 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgag |
148 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
17818220 |
ctctccactcatattggtaattgtgag |
17818194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 18852822 - 18852683
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
120 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||| |||| ||||||| ||||||| || ||||||||||||||| || || || || | || | |
|
|
| T |
18852822 |
ttgtacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatc-aagaaataacattattt |
18852727 |
T |
|
| Q |
121 |
attctccattcatattggtaattgtgagtagggtcatgggttct |
164 |
Q |
| |
|
| |||||| ||||||||||||||||||| |||| ||||| |||| |
|
|
| T |
18852726 |
actctccactcatattggtaattgtgagaagggccatggattct |
18852683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 29685338 - 29685293
Alignment:
| Q |
21 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacc |
66 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29685338 |
ttgtacctgtgggttagtactaacataaagcaaattttccaccacc |
29685293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 24390285 - 24390326
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccacc |
63 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
24390285 |
tgtacctgtttgttagtaccagcataaagcaaattttccacc |
24390326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 24501134 - 24500924
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||| |||| |||||||| || | | |
|
|
| T |
24501134 |
tgtacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattga |
24501035 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| | ||||||||||||||||| |||| ||||| ||||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
24501034 |
ctctccactaatattggtaattgtgagaagggccatggattctaagaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
24500935 |
T |
|
| Q |
222 |
cttgatccctt |
232 |
Q |
| |
|
|||||||||| |
|
|
| T |
24500934 |
attgatccctt |
24500924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 25339516 - 25339769
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||| |||| |||||| ||||||||||| |||||||||||||||||| || |||| ||||||| ||||||||||||| ||||||||||||| ||| | | |
|
|
| T |
25339516 |
tgtacatgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattga |
25339615 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||| |||||||||||||||||||| ||| |||| |||||||| ||||||| ||| ||||| |||| ||||| || | || ||| |||||||||| |
|
|
| T |
25339616 |
ccttccactcatattggtaattgtgagttgggccatgagttctaagaaaggacatagtggtgagggtatctaagtctaaactattgttcccctctatcct |
25339715 |
T |
|
| Q |
222 |
cttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
275 |
Q |
| |
|
|||||||||| | ||||||| || | |||| || ||||||| || |||||||| |
|
|
| T |
25339716 |
attgatccctttactcacacttactccaaacttcctagcaatgaaggtgatgat |
25339769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 11741 - 11867
Alignment:
| Q |
40 |
ccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataattctccattcatattggt |
139 |
Q |
| |
|
|||||||||| ||| ||||| ||||||||| || ||||||| |||||||||||||||||| |||| |||||||| || | | |||||| |||||||||| |
|
|
| T |
11741 |
ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt |
11840 |
T |
|
| Q |
140 |
aattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
||||||||| |||||||||| |||||| |
|
|
| T |
11841 |
aattgtgagaagggtcatggattctaa |
11867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 18632 - 18488
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||||||| ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
18632 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
18533 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|||||| |||||||||||||||| | |||| ||| |||||||| |
|
|
| T |
18532 |
ctctccactcatattggtaattgttataagggccatcggttctaa |
18488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0566 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0566
Description:
Target: scaffold0566; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 1411 - 1202
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||||| || ||||||| || ||||||||||||||| |||| ||||||| | | | |
|
|
| T |
1411 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattga |
1312 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagttttcctctatcct |
221 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||||| |||||| || ||| |||||||| || | ||||| |||||| |||||| |||| ||||| |
|
|
| T |
1311 |
ctctccactcatattggtaattgttagaagggtcatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
1213 |
T |
|
| Q |
222 |
cttgatccctt |
232 |
Q |
| |
|
|| ||||||| |
|
|
| T |
1212 |
atttatccctt |
1202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 17138 - 17029
Alignment:
| Q |
55 |
ttttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataattctccattcatattggtaattgtgagtagggt |
154 |
Q |
| |
|
||||| |||||||| | | ||||||| |||||||||||||||||| |||| |||||||| || | | |||||| ||||||||||||||||||| ||||| |
|
|
| T |
17138 |
ttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggt |
17039 |
T |
|
| Q |
155 |
catgggttct |
164 |
Q |
| |
|
||||| |||| |
|
|
| T |
17038 |
catggattct |
17029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 38043 - 38184
Alignment:
| Q |
22 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataa |
121 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||| ||||||| | | ||||||| || ||||||||||||||| |||| ||||||| || | | |
|
|
| T |
38043 |
tgtacctgtgggttagtgccaacataa---aagttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
38139 |
T |
|
| Q |
122 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
166 |
Q |
| |
|
|| ||| ||||||||| ||||||||| |||| ||||| |||||| |
|
|
| T |
38140 |
ctcgccactcatattggaaattgtgagaagggccatggattctaa |
38184 |
T |
|
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Target: scaffold1184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1184
Description:
Target: scaffold1184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 537 - 571
Alignment:
| Q |
29 |
gtgggttagtaccaacataaagcaaattttccacc |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
537 |
gtgggttagtaccaacataaagcaaattttccacc |
571 |
T |
|
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