View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5353_low_3 (Length: 238)
Name: NF5353_low_3
Description: NF5353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5353_low_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 33751424 - 33751197
Alignment:
| Q |
11 |
atcatcataaaaaacacctagaaattagagtgtacaaatgactctaacaaaacgaagaggatcatgaccaaatcctatggttcacatcaatccaagaatt |
110 |
Q |
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| T |
33751424 |
atcatcataaaaaacacctagaaattagagtgtacaaatgactctaacaaaacgaagaggatcatgaccaaatcctttggttcacatcaatccaagaatt |
33751325 |
T |
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| Q |
111 |
acaaaaatcaatttgatgaaatcagtctaaattaagnnnnnnnatctttagatataacatccatcttccaccacaataaaacataaaagagagatgctac |
210 |
Q |
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| T |
33751324 |
acaaaaatcaatttgatgaaatcagtctaaattaagtttttttatctttagatataacatccatcttccaccacaataaaacataaaagagagatgctac |
33751225 |
T |
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| Q |
211 |
aattaaaaaatgaaacaaattcatcaat |
238 |
Q |
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| T |
33751224 |
aattaaaaaatgaaacaaattcatcaat |
33751197 |
T |
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