View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5356_high_2 (Length: 250)
Name: NF5356_high_2
Description: NF5356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5356_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 32486337 - 32486130
Alignment:
| Q |
1 |
tgtcaaaatcaaattttattttggcaatatcctaactgagagataaaaaatattggaaaatctataatggcaaagggtaacgagaaaaacggagaaaaca |
100 |
Q |
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| T |
32486337 |
tgtcaaaatcaaattttattttggcaatatcctaactgagagataaaaaatattggaaaatctataatgacaaagggtaacgagaaaaacggagaaaaca |
32486238 |
T |
|
| Q |
101 |
aaggttagagaagtaaagcaacaaatgattgggtgtcgttagagtacagtgtgatgggaacgaaaaaatgacagcaaaagccttatttgcatgttttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32486237 |
aaggttagagaagtaaagcaacaaatgattgggtgtcgttagagtacagtgtgatgggaacgaaaaaatgacagcaaaagccttatttgcatgttttgtt |
32486138 |
T |
|
| Q |
201 |
attttcac |
208 |
Q |
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|||||||| |
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| T |
32486137 |
attttcac |
32486130 |
T |
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