View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5357-Insertion-14 (Length: 257)
Name: NF5357-Insertion-14
Description: NF5357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5357-Insertion-14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 8 - 257
Target Start/End: Complemental strand, 43470003 - 43469762
Alignment:
| Q |
8 |
gtatatgatgtgagaagaagaattcatcatgtgaatgcatgtgcattgagttggagaacatgctcaaagtaacaaacaacacacttaggtacacctgtct |
107 |
Q |
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| T |
43470003 |
gtatatgatgtgagaagaagaattcatcatgtgaatgcatgtgcattgagttggagaacatgctcaaagtaacaaacaacacacttaggtacacctgtct |
43469904 |
T |
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| Q |
108 |
ctctcccattccattggaagcctccttttaaagtgtgtattgtggtccccaccttctaatcttattgatttatccattaatacatattactactatagat |
207 |
Q |
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| T |
43469903 |
ctctcccattccattggaagcctccttttaaagtgtgtattgtggtccccaccttctaatcttattgatttatccattaatacatattacta----ggta |
43469808 |
T |
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| Q |
208 |
acaccttaattatataaatgttctctcttggtctatcattttgcaatacc |
257 |
Q |
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| T |
43469807 |
acacc----ttatataaatgttctctcttggtctatcattttgcaatacc |
43469762 |
T |
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