View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5358_high_8 (Length: 300)

Name: NF5358_high_8
Description: NF5358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5358_high_8
NF5358_high_8
[»] chr4 (27 HSPs)
chr4 (144-263)||(19241877-19242000)
chr4 (144-270)||(17994091-17994222)
chr4 (144-270)||(18007359-18007490)
chr4 (144-236)||(36210446-36210540)
chr4 (150-236)||(14711116-14711202)
chr4 (144-263)||(18774962-18775084)
chr4 (150-270)||(14778741-14778866)
chr4 (144-270)||(16819651-16819780)
chr4 (144-236)||(1672013-1672107)
chr4 (144-236)||(1674488-1674582)
chr4 (144-270)||(55651177-55651305)
chr4 (144-261)||(23508970-23509090)
chr4 (144-236)||(11535699-11535789)
chr4 (144-232)||(8997598-8997685)
chr4 (144-236)||(33378038-33378133)
chr4 (144-236)||(49002295-49002386)
chr4 (144-236)||(31267107-31267197)
chr4 (144-236)||(11514889-11514979)
chr4 (144-202)||(5873225-5873281)
chr4 (144-192)||(15207746-15207792)
chr4 (144-202)||(3370570-3370626)
chr4 (144-202)||(3390310-3390366)
chr4 (144-202)||(10695495-10695551)
chr4 (144-202)||(10909262-10909318)
chr4 (144-202)||(24713285-24713341)
chr4 (144-193)||(19581095-19581142)
chr4 (144-193)||(27815303-27815350)
[»] chr3 (54 HSPs)
chr3 (144-270)||(31114259-31114389)
chr3 (150-270)||(51989417-51989542)
chr3 (144-270)||(10528978-10529112)
chr3 (144-236)||(45862023-45862115)
chr3 (144-270)||(17006827-17006960)
chr3 (144-270)||(22150879-22151013)
chr3 (153-236)||(41045385-41045470)
chr3 (144-270)||(13147898-13148033)
chr3 (144-270)||(21735944-21736073)
chr3 (144-231)||(15848835-15848924)
chr3 (144-236)||(11909473-11909567)
chr3 (144-236)||(49989894-49989988)
chr3 (152-270)||(2246209-2246329)
chr3 (144-270)||(13199517-13199645)
chr3 (144-270)||(15662978-15663106)
chr3 (152-270)||(17017641-17017766)
chr3 (144-236)||(1053544-1053634)
chr3 (144-236)||(15651381-15651471)
chr3 (144-236)||(12753054-12753148)
chr3 (150-236)||(17281744-17281828)
chr3 (144-202)||(29906525-29906581)
chr3 (144-202)||(29947690-29947746)
chr3 (144-202)||(29996844-29996900)
chr3 (144-223)||(15833041-15833122)
chr3 (152-236)||(1063981-1064063)
chr3 (144-236)||(16076764-16076854)
chr3 (144-202)||(16671506-16671562)
chr3 (144-202)||(29933904-29933960)
chr3 (144-202)||(29983058-29983114)
chr3 (144-236)||(51340644-51340738)
chr3 (144-188)||(13953896-13953940)
chr3 (144-270)||(27172671-27172795)
chr3 (144-202)||(8740469-8740525)
chr3 (144-202)||(9381001-9381057)
chr3 (144-202)||(9391547-9391603)
chr3 (144-202)||(27883218-27883274)
chr3 (144-231)||(37412239-37412327)
chr3 (144-262)||(14580977-14581093)
chr3 (144-202)||(1784414-1784470)
chr3 (144-202)||(9006852-9006908)
chr3 (144-202)||(11206417-11206473)
chr3 (144-202)||(11217068-11217124)
chr3 (144-233)||(13261984-13262072)
chr3 (144-187)||(17961181-17961223)
chr3 (144-202)||(29461556-29461612)
chr3 (144-202)||(29472408-29472464)
chr3 (144-193)||(4175109-4175156)
chr3 (144-193)||(4404108-4404155)
chr3 (144-193)||(14258416-14258463)
chr3 (144-193)||(37866281-37866328)
chr3 (144-193)||(37885414-37885461)
chr3 (144-193)||(39673235-39673282)
chr3 (144-202)||(14322034-14322091)
chr3 (144-176)||(18006126-18006158)
[»] chr1 (38 HSPs)
chr1 (144-270)||(28473863-28473993)
chr1 (144-270)||(52350998-52351129)
chr1 (144-270)||(5929341-5929471)
chr1 (30-98)||(8450790-8450858)
chr1 (144-270)||(20251408-20251541)
chr1 (144-270)||(24029000-24029132)
chr1 (144-270)||(22642527-22642661)
chr1 (144-270)||(44200649-44200778)
chr1 (144-270)||(46181194-46181323)
chr1 (144-270)||(22655109-22655243)
chr1 (144-236)||(26548611-26548705)
chr1 (144-236)||(17370674-17370768)
chr1 (152-270)||(19037647-19037772)
chr1 (144-270)||(20798702-20798830)
chr1 (144-270)||(22610290-22610418)
chr1 (144-236)||(14388480-14388570)
chr1 (144-270)||(20884197-20884326)
chr1 (144-236)||(41132970-41133060)
chr1 (144-270)||(45070943-45071072)
chr1 (144-261)||(20867177-20867297)
chr1 (144-236)||(34255871-34255965)
chr1 (144-270)||(18311288-18311416)
chr1 (144-232)||(23926696-23926783)
chr1 (144-202)||(675209-675265)
chr1 (144-202)||(20196079-20196135)
chr1 (144-270)||(22018964-22019102)
chr1 (144-202)||(28379627-28379687)
chr1 (144-187)||(19170731-19170774)
chr1 (144-193)||(12944973-12945020)
chr1 (144-185)||(21543671-21543712)
chr1 (150-201)||(11195456-11195505)
chr1 (144-202)||(148600-148656)
chr1 (144-202)||(154675-154731)
chr1 (144-202)||(5973522-5973578)
chr1 (144-193)||(19178723-19178770)
chr1 (144-193)||(19187602-19187649)
chr1 (144-193)||(23580722-23580769)
chr1 (144-232)||(47195026-47195112)
[»] chr2 (33 HSPs)
chr2 (144-270)||(20646898-20647029)
chr2 (150-236)||(22755105-22755191)
chr2 (144-270)||(19313308-19313437)
chr2 (144-264)||(19498287-19498410)
chr2 (144-270)||(19300301-19300430)
chr2 (144-236)||(24814893-24814987)
chr2 (144-236)||(23393046-23393140)
chr2 (144-236)||(38033163-38033251)
chr2 (144-236)||(24801927-24802020)
chr2 (144-236)||(967832-967922)
chr2 (144-236)||(1041959-1042049)
chr2 (144-236)||(17969538-17969628)
chr2 (144-232)||(22763464-22763550)
chr2 (144-232)||(22774168-22774254)
chr2 (144-236)||(24274835-24274925)
chr2 (144-236)||(1083642-1083736)
chr2 (144-236)||(1088993-1089087)
chr2 (144-202)||(17970632-17970688)
chr2 (144-202)||(28065273-28065329)
chr2 (151-202)||(36785161-36785210)
chr2 (144-219)||(19356129-19356203)
chr2 (144-202)||(27978744-27978800)
chr2 (144-202)||(2561298-2561354)
chr2 (144-202)||(18769267-18769323)
chr2 (144-202)||(24415383-24415439)
chr2 (144-202)||(24427948-24428004)
chr2 (144-202)||(26866882-26866938)
chr2 (144-202)||(26879471-26879527)
chr2 (144-193)||(16768753-16768800)
chr2 (144-193)||(29244032-29244079)
chr2 (144-193)||(29254611-29254658)
chr2 (144-193)||(43082464-43082511)
chr2 (144-193)||(43093073-43093120)
[»] chr7 (29 HSPs)
chr7 (144-236)||(8999327-8999419)
chr7 (144-270)||(11087396-11087529)
chr7 (144-270)||(24882772-24882901)
chr7 (144-236)||(4432972-4433066)
chr7 (144-270)||(13174957-13175090)
chr7 (144-270)||(15216136-15216264)
chr7 (144-236)||(3476731-3476821)
chr7 (144-236)||(18418934-18419024)
chr7 (144-236)||(18441015-18441105)
chr7 (144-236)||(26209939-26210029)
chr7 (144-236)||(4412399-4412493)
chr7 (152-270)||(29589820-29589940)
chr7 (144-236)||(8933383-8933473)
chr7 (144-236)||(13682139-13682229)
chr7 (144-236)||(48382007-48382097)
chr7 (144-202)||(12734589-12734645)
chr7 (144-236)||(38403601-38403691)
chr7 (144-202)||(602394-602452)
chr7 (144-233)||(38594104-38594191)
chr7 (144-202)||(1367450-1367506)
chr7 (144-202)||(3165555-3165611)
chr7 (144-202)||(15888752-15888808)
chr7 (144-202)||(30049340-30049396)
chr7 (144-202)||(44280315-44280371)
chr7 (144-193)||(540905-540952)
chr7 (144-193)||(5685339-5685386)
chr7 (150-193)||(9433090-9433131)
chr7 (150-193)||(9443686-9443727)
chr7 (144-202)||(40055176-40055233)
[»] chr6 (36 HSPs)
chr6 (144-270)||(21127864-21127993)
chr6 (150-236)||(7586580-7586666)
chr6 (144-270)||(11205730-11205859)
chr6 (144-270)||(11235283-11235412)
chr6 (144-270)||(31931207-31931336)
chr6 (144-236)||(22386438-22386532)
chr6 (144-263)||(19289670-19289792)
chr6 (144-270)||(18555054-18555183)
chr6 (144-270)||(19452903-19453037)
chr6 (152-231)||(14070501-14070580)
chr6 (144-236)||(20635355-20635449)
chr6 (144-270)||(12953414-12953542)
chr6 (152-202)||(14051849-14051899)
chr6 (144-270)||(25518473-25518601)
chr6 (144-270)||(22308574-22308702)
chr6 (144-232)||(25735882-25735968)
chr6 (145-232)||(25679024-25679109)
chr6 (144-270)||(17741986-17742114)
chr6 (144-232)||(25687074-25687160)
chr6 (144-202)||(9934027-9934083)
chr6 (144-236)||(17608728-17608822)
chr6 (144-202)||(18826593-18826649)
chr6 (144-202)||(18834988-18835044)
chr6 (144-202)||(29765321-29765377)
chr6 (150-202)||(27166797-27166847)
chr6 (144-262)||(17063984-17064100)
chr6 (144-202)||(4292511-4292567)
chr6 (144-202)||(31572200-31572256)
chr6 (150-202)||(17746138-17746188)
chr6 (144-202)||(5844872-5844928)
chr6 (144-202)||(12353341-12353397)
chr6 (144-202)||(12827478-12827534)
chr6 (144-202)||(25787487-25787543)
chr6 (144-193)||(9112858-9112905)
chr6 (144-193)||(9123495-9123542)
chr6 (207-262)||(17047401-17047461)
[»] scaffold0185 (1 HSPs)
scaffold0185 (144-264)||(32625-32748)
[»] scaffold0443 (1 HSPs)
scaffold0443 (144-236)||(1388-1480)
[»] scaffold0017 (3 HSPs)
scaffold0017 (150-236)||(40697-40783)
scaffold0017 (144-236)||(59243-59335)
scaffold0017 (150-202)||(175147-175197)
[»] chr8 (32 HSPs)
chr8 (150-236)||(8031659-8031745)
chr8 (150-264)||(19460820-19460937)
chr8 (150-264)||(19558498-19558615)
chr8 (143-270)||(23271512-23271643)
chr8 (144-236)||(29379204-29379298)
chr8 (144-236)||(17519490-17519584)
chr8 (144-236)||(21288029-21288123)
chr8 (144-236)||(45568348-45568442)
chr8 (144-270)||(40002853-40002987)
chr8 (144-236)||(21540579-21540673)
chr8 (144-270)||(3843368-3843496)
chr8 (144-236)||(20259962-20260052)
chr8 (144-236)||(21046592-21046682)
chr8 (144-236)||(21298639-21298733)
chr8 (144-270)||(22136164-22136292)
chr8 (144-236)||(23370399-23370489)
chr8 (144-232)||(22167370-22167457)
chr8 (144-202)||(22211767-22211824)
chr8 (144-202)||(7018759-7018815)
chr8 (144-202)||(30315073-30315129)
chr8 (144-193)||(18769523-18769570)
chr8 (144-188)||(28903093-28903137)
chr8 (144-202)||(16746847-16746903)
chr8 (144-202)||(18153584-18153640)
chr8 (144-202)||(18158103-18158159)
chr8 (144-202)||(19224781-19224837)
chr8 (144-202)||(20161608-20161664)
chr8 (144-202)||(20195803-20195859)
chr8 (144-202)||(23469838-23469894)
chr8 (144-193)||(3220479-3220526)
chr8 (144-193)||(19128595-19128642)
chr8 (144-193)||(19139127-19139174)
[»] scaffold0012 (4 HSPs)
scaffold0012 (144-236)||(8002-8094)
scaffold0012 (144-202)||(127463-127519)
scaffold0012 (144-202)||(140621-140677)
scaffold0012 (144-232)||(16422-16508)
[»] chr5 (33 HSPs)
chr5 (150-270)||(13404754-13404881)
chr5 (144-270)||(20168456-20168585)
chr5 (144-236)||(1915047-1915141)
chr5 (144-270)||(20215490-20215623)
chr5 (144-263)||(36096048-36096170)
chr5 (144-263)||(36097505-36097627)
chr5 (144-236)||(11208422-11208516)
chr5 (144-236)||(32160379-32160473)
chr5 (144-236)||(40228289-40228383)
chr5 (156-270)||(13533563-13533680)
chr5 (144-236)||(25112290-25112384)
chr5 (144-236)||(25171381-25171475)
chr5 (144-236)||(106549-106639)
chr5 (144-236)||(32753686-32753776)
chr5 (144-270)||(35543518-35543647)
chr5 (152-236)||(40033180-40033266)
chr5 (144-270)||(20417295-20417423)
chr5 (144-270)||(13522824-13522953)
chr5 (144-270)||(20625157-20625285)
chr5 (144-187)||(23488151-23488194)
chr5 (144-202)||(1108885-1108941)
chr5 (144-202)||(1121643-1121699)
chr5 (144-202)||(8522304-8522360)
chr5 (144-202)||(20798159-20798215)
chr5 (144-187)||(23478005-23478048)
chr5 (144-193)||(5290317-5290364)
chr5 (144-193)||(5300888-5300935)
chr5 (144-193)||(17446437-17446484)
chr5 (144-193)||(22559909-22559956)
chr5 (144-193)||(27603159-27603206)
chr5 (144-193)||(27622508-27622555)
chr5 (144-193)||(34772382-34772429)
chr5 (144-193)||(34783327-34783374)
[»] scaffold0010 (1 HSPs)
scaffold0010 (152-270)||(61374-61499)
[»] scaffold0005 (1 HSPs)
scaffold0005 (150-236)||(60864-60950)
[»] scaffold0002 (3 HSPs)
scaffold0002 (144-270)||(475596-475729)
scaffold0002 (144-270)||(482116-482249)
scaffold0002 (144-270)||(156969-157104)
[»] scaffold0090 (2 HSPs)
scaffold0090 (144-270)||(462-591)
scaffold0090 (144-270)||(4842-4971)
[»] scaffold0007 (1 HSPs)
scaffold0007 (144-270)||(59602-59731)
[»] scaffold0570 (1 HSPs)
scaffold0570 (144-270)||(2017-2151)
[»] scaffold0655 (1 HSPs)
scaffold0655 (144-236)||(4751-4845)
[»] scaffold0752 (2 HSPs)
scaffold0752 (144-270)||(1021-1150)
scaffold0752 (144-270)||(1636-1765)
[»] scaffold0547 (1 HSPs)
scaffold0547 (144-270)||(534-663)
[»] scaffold0908 (1 HSPs)
scaffold0908 (144-270)||(4242-4376)
[»] scaffold0771 (1 HSPs)
scaffold0771 (144-236)||(5976-6070)
[»] scaffold0269 (1 HSPs)
scaffold0269 (144-236)||(6915-7009)
[»] scaffold0220 (1 HSPs)
scaffold0220 (144-236)||(2197-2291)
[»] scaffold0084 (2 HSPs)
scaffold0084 (144-236)||(771-865)
scaffold0084 (144-193)||(57175-57222)
[»] scaffold0177 (1 HSPs)
scaffold0177 (144-231)||(20762-20851)
[»] scaffold0544 (1 HSPs)
scaffold0544 (144-270)||(10103-10231)
[»] scaffold0154 (1 HSPs)
scaffold0154 (144-236)||(35354-35444)
[»] scaffold0001 (1 HSPs)
scaffold0001 (144-270)||(29109-29238)
[»] scaffold0163 (1 HSPs)
scaffold0163 (156-261)||(29301-29409)
[»] scaffold0018 (1 HSPs)
scaffold0018 (144-236)||(6837-6931)
[»] scaffold1321 (1 HSPs)
scaffold1321 (144-231)||(1324-1413)
[»] scaffold1263 (1 HSPs)
scaffold1263 (144-231)||(1517-1606)
[»] scaffold0042 (1 HSPs)
scaffold0042 (144-270)||(5112-5240)
[»] scaffold0422 (1 HSPs)
scaffold0422 (150-236)||(11400-11488)
[»] scaffold0149 (1 HSPs)
scaffold0149 (144-270)||(38309-38438)
[»] scaffold0410 (1 HSPs)
scaffold0410 (144-261)||(15544-15664)
[»] scaffold0739 (1 HSPs)
scaffold0739 (144-236)||(1810-1900)
[»] scaffold0407 (1 HSPs)
scaffold0407 (150-202)||(12500-12550)
[»] scaffold0142 (1 HSPs)
scaffold0142 (144-236)||(40318-40408)
[»] scaffold0207 (2 HSPs)
scaffold0207 (144-231)||(10355-10444)
scaffold0207 (153-231)||(20265-20345)
[»] scaffold0080 (1 HSPs)
scaffold0080 (166-270)||(16349-16455)
[»] scaffold0664 (1 HSPs)
scaffold0664 (153-270)||(1005-1121)
[»] scaffold0050 (1 HSPs)
scaffold0050 (144-187)||(35280-35323)
[»] scaffold0497 (1 HSPs)
scaffold0497 (144-236)||(10637-10727)
[»] scaffold0072 (1 HSPs)
scaffold0072 (144-232)||(37087-37173)
[»] scaffold2071 (1 HSPs)
scaffold2071 (144-236)||(820-911)
[»] scaffold0132 (1 HSPs)
scaffold0132 (152-236)||(38468-38554)
[»] scaffold0028 (2 HSPs)
scaffold0028 (144-202)||(14400-14456)
scaffold0028 (144-202)||(54506-54562)
[»] scaffold0747 (1 HSPs)
scaffold0747 (144-193)||(2507-2554)


Alignment Details
Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 144 - 263
Target Start/End: Original strand, 19241877 - 19242000
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||    ||||    
T  19241877 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgcttttg 19241976  T
Q  240 agaaacaattttggcagagtttgg 263  Q
    ||||||||||||||||||||||||    
T  19241977 agaaacaattttggcagagtttgg 19242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 17994222 - 17994091
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----ttt 238  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||     |||    
T  17994222 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgcttttt 17994123  T
Q  239 gagaaacaattttggcagagtttgggtgcttt 270  Q
    ||||||||| |||||||||||||||| |||||    
T  17994122 gagaaacaaatttggcagagtttgggcgcttt 17994091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 18007490 - 18007359
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----ttt 238  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||     |||    
T  18007490 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgtttttt 18007391  T
Q  239 gagaaacaattttggcagagtttgggtgcttt 270  Q
    | ||||||| |||||||||||||||| |||||    
T  18007390 gtgaaacaaatttggcagagtttgggcgcttt 18007359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 36210540 - 36210446
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | |||||| |||| ||||||||||||||||||    
T  36210540 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttcaaagatatatcaaatgaacacagaaattcaaagt 36210446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 14711202 - 14711116
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | || ||| |||| ||||||||||||||||||    
T  14711202 tcagtggtgttcacaaaacaatgcaattgaaagactctagacttaagaatttctaagatttatcaaatgaacacagaaattcaaagt 14711116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 263
Target Start/End: Complemental strand, 18775084 - 18774962
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  18775084 atacaatcaatggtgttcacaatacaatgcaatt-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 18774986  T
Q  240 agaaacaattttggcagagtttgg 263  Q
    |||||||| |||||||||||||||    
T  18774985 agaaacaaatttggcagagtttgg 18774962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 14778866 - 14778741
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttg--agaaa 244  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||  | || ||| |||| |||||||||||||||||   ||||   ||||    
T  14778866 tcagtggtgttcacaaaacaatgcaattgaaagactctagtcttaagaatttctaagatttatcaaatgaacacagaaattcaaagtgctttgcatgaaa 14778767  T
Q  245 caattttggcagagtttgggtgcttt 270  Q
    ||| |||||||||||||||| |||||    
T  14778766 caaatttggcagagtttgggcgcttt 14778741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 16819780 - 16819651
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||  | |||||| ||||||  ||||||||||||||    ||||    
T  16819780 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaggaatttctaagatatatcaaatcagtacagaaattcaaagtgcttttg 16819682  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||| ||||| || |||||    
T  16819681 agaaacaaatttggcaaagttttggcgcttt 16819651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1672013 - 1672107
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| || |||||||||| ||||    
T  1672013 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaatacagaaattctaagt 1672107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1674488 - 1674582
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| || |||||||||| ||||    
T  1674488 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaatacagaaattctaagt 1674582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 55651177 - 55651305
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||      
T  55651177 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgctttaa 55651274  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||||||||| || |||||    
T  55651275 agaaacaaatttggcagagttttggcgcttt 55651305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 23508970 - 23509090
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||||| ||||||   |||||||||| ||    ||||    
T  23508970 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcagagtgcttttg 23509068  T
Q  240 agaaacaattttggcagagttt 261  Q
    |||| ||| |||||||||||||    
T  23509069 agaatcaaatttggcagagttt 23509090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 11535699 - 11535789
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  11535699 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 11535789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 8997685 - 8997598
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  8997685 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 8997598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 33378038 - 33378133
Alignment:
Q  144 atacagtcagtggtgttcacaatac-aatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  33378038 atacaatcagtggtgttcacaataccaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 33378133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 49002386 - 49002295
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagac-ttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||| |||||||||||  | |||||| ||||||   ||||||||||||||    
T  49002386 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagactttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 49002295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 31267197 - 31267107
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||  | || ||| ||||||   ||||||||||||||    
T  31267197 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttctaagatgtatcaaatcagtccagaaattcaaagt 31267107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 11514889 - 11514979
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| || ||||||||||||||||||||||||  ||||||||||||||| ||||||||  | || ||| ||||||   ||||||||||||||    
T  11514889 atacaatcggtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 11514979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 5873225 - 5873281
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  5873225 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 5873281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 15207792 - 15207746
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagact 192  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  15207792 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagact 15207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 3370570 - 3370626
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||  |||||||    
T  3370570 atacaatcagtggtgttctcaatacaatgcaat--aaagactctagacttgtgaatttc 3370626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 3390310 - 3390366
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||  |||||||    
T  3390310 atacaatcagtggtgttctcaatacaatgcaat--aaagactctagacttgtgaatttc 3390366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 10695495 - 10695551
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  10695495 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttgtgaatttc 10695551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 10909262 - 10909318
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  10909262 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 10909318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 24713285 - 24713341
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||| ||||||||  |||||||||||||||  |||||||    
T  24713285 atacaatcagtggtgttcacaatataatgcaat--aaagactctagacttgtgaatttc 24713341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 19581095 - 19581142
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  19581095 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 19581142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 27815350 - 27815303
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  27815350 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 27815303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 4e-41; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 31114389 - 31114259
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||| |||||||||||||||||    ||||    
T  31114389 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaattaacacagaaattcaaagtgcttttg 31114290  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    ||||||||||||||||||||||||| |||||    
T  31114289 agaaacaattttggcagagtttgggcgcttt 31114259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 51989542 - 51989417
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----tttgagaaa 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||     |||||||||    
T  51989542 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgctttttgagaaa 51989443  T
Q  245 caattttggcagagtttgggtgcttt 270  Q
    ||| |||||||||||||||| |||||    
T  51989442 caaatttggcagagtttgggcgcttt 51989417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 10528978 - 10529112
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tt 237  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||||||||||||||    ||    
T  10528978 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaattaacacagaaattcaaagtgcttt 10529077  T
Q  238 tga--gaaacaattttggcagagtttgggtgcttt 270  Q
    |||  ||||||| |||||||||||||||| |||||    
T  10529078 tgagtgaaacaaatttggcagagtttgggcgcttt 10529112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 45862115 - 45862023
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  45862115 atacaatcagtggtgttcacaatacaatgcaattgaaagactctatacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 45862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 17006827 - 17006960
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----t 236  Q
    ||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||  | |||||| |||| |||||||||||||||||     |    
T  17006827 atacaatcagtggtgttcacaatacaatgaaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgcttt 17006926  T
Q  237 ttgagaaacaattttggcagagtttgggtgcttt 270  Q
     || ||||||| |||||||||||||||| |||||    
T  17006927 gtgtgaaacaaatttggcagagtttgggcgcttt 17006960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 22150879 - 22151013
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||||||||||||||          
T  22150879 atacaatcagtggtgttcacaaaacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgcttt 22150978  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| |||||||||||||||| |||||    
T  22150979 tgtgtgaaacaaatttggcagagtttgggcgcttt 22151013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 41045385 - 41045470
Alignment:
Q  153 gtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| ||||||||| |||||||||||||    
T  41045385 gtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatcaacatagaaattcaaagt 41045470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 13147898 - 13148033
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacag-aaattcaaag----- 235  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||| ||||||||||         
T  13147898 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaaattcaaagtgctt 13147997  T
Q  236 -tttgagaaacaattttggcagagtttgggtgcttt 270  Q
     | || ||||||| |||||||||||||||| |||||    
T  13147998 ttgtgtgaaacaaatttggcagagtttgggcgcttt 13148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 21735944 - 21736073
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  21735944 atacaatcggtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 21736042  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| |||||||||||||||| |||||    
T  21736043 agaatcaaatttggcagagtttgggcgcttt 21736073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 15848835 - 15848924
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| |||||||||||||    
T  15848835 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattc 15848924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 11909567 - 11909473
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||| |||||||||||||||||  ||||| |||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  11909567 atacaatcagtggtgttcacaacacaatgcaattgaaagactctctaaacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 11909473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 49989894 - 49989988
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| | |||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  49989894 atacaatcagtggtgttcacaatacaatgcaaataaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 49989988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 2246209 - 2246329
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaacaa 247  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||| |||| |||    
T  2246209 agtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgctttttagaatcaa 2246306  T
Q  248 ttttggcagagtttgggtgcttt 270  Q
     ||||||||||||| || |||||    
T  2246307 atttggcagagttttggcgcttt 2246329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 13199645 - 13199517
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| |||||    |||||||||||||    |||     
T  13199645 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcggtgcagaaattcaaagtgcttttt 13199548  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  13199547 agaatcaaatttggcagagttttggcgcttt 13199517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 15663106 - 15662978
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt----ttg 239  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    ||     
T  15663106 atacaatcagtggtgttcacaatacaatgcaat--acagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgctgttt 15663009  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  15663008 agaatcaaatttggcagagttttggcgcttt 15662978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 17017641 - 17017766
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----tttgagaaa 244  Q
    ||||||||||||||||||||| |||| |||||||||  |||||||||||||||  | |||||| |||| | |||||||||||||||     | || ||||    
T  17017641 agtggtgttcacaatacaatgaaattaaaagactctctagacttaagaatttctaagatatatcaaatgagcacagaaattcaaagtgctttgtgtgaaa 17017740  T
Q  245 caattttggcagagtttgggtgcttt 270  Q
    ||| |||||||||||||||| |||||    
T  17017741 caaatttggcagagtttgggcgcttt 17017766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1053544 - 1053634
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  1053544 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 1053634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 15651471 - 15651381
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  15651471 atacaatcagtggtgttcacaatacaatgcaat--acagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 15651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 12753148 - 12753054
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactc--tagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||| ||| ||||||  ||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  12753148 atacaatcattggtgttcacaatacaatgcaaatgatagactctttagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 12753054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 17281828 - 17281744
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||  | |||||| ||||||   ||||||||||||||    
T  17281828 tcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttctaagatatatcaaatcagtgcagaaattcaaagt 17281744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29906581 - 29906525
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  29906581 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 29906525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29947746 - 29947690
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  29947746 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 29947690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29996900 - 29996844
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  29996900 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 29996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 15833041 - 15833122
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacac 223  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| |||||    
T  15833041 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacac 15833122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 1063981 - 1064063
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  1063981 agtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 1064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 16076764 - 16076854
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||  | || ||| ||||||   ||||||||||||||    
T  16076764 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 16076854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 16671562 - 16671506
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  16671562 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 16671506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29933960 - 29933904
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  29933960 atacaatcagtggtgtttacaatacaatgcaat--aaagactctagacttaagaatttc 29933904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29983114 - 29983058
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  29983114 atacaatcagtggtgtttacaatacaatgcaat--aaagactctagacttaagaatttc 29983058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 51340644 - 51340738
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| ||| |||  |||||||||| ||||||||  | |||||| |||| |||||| |||||| ||||    
T  51340644 atacaatcagtggtgttcacaatacaatgcaaatgagagactctctagactttagaatttctaagatatatcaaatgaacacaaaaattctaagt 51340738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 13953896 - 13953940
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactcta 188  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||    
T  13953896 atacaatcagtggtgttcacaatacaatgcaaatgaaagactcta 13953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 27172671 - 27172795
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt----ttg 239  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||   ||  ||||||||  | |||||| |||||||  ||||||||||||||    |||    
T  27172671 atacaatcagtggtgttctcaatacaatgcaata-aaagactct---ct--agaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttg 27172764  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||||||||||||||| |||||    
T  27172765 agaaacaaatttggcagagtttgggcgcttt 27172795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 8740525 - 8740469
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  8740525 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgggaatttc 8740469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 9381057 - 9381001
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  9381057 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttttgaatttc 9381001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 9391603 - 9391547
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  9391603 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttttgaatttc 9391547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 27883218 - 27883274
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  27883218 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 27883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 37412239 - 37412327
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||| |||| |||||||||||||||||||| | ||| ||||||  |||||||||||||||  | |||||| |||| |||||||||||||    
T  37412239 atacaatcagcggtgttcacaatacaatgcagt-gaaggactctctagacttaagaatttctaagatatatcaaatgaacacagaaattc 37412327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 14580977 - 14581093
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | |||||||||   ||  ||||||||  | |||||| ||||||    ||||||||||||    ||||    
T  14580977 atacaatcagtggtgttcacaatacaatgcaa-taaaagactct---ct--agaatttctaagatatatcaaatcagtgaagaaattcaaagtgcttttg 14581070  T
Q  240 agaaacaattttggcagagtttg 262  Q
    |||||||||||||||||||||||    
T  14581071 agaaacaattttggcagagtttg 14581093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 1784470 - 1784414
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  1784470 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 1784414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 9006908 - 9006852
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||  |||||||    
T  9006908 atacaatcagtggtgttctcaatacaatgcaat--aaagactctagacttgtgaatttc 9006852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 11206473 - 11206417
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  11206473 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 11206417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 11217124 - 11217068
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  11217124 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 11217068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 13262072 - 13261984
Alignment:
Q  144 atacagtcagtggtgttcacaa-tacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaa 233  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||||||||  |||||||  | || ||| ||||||  ||||||||||||    
T  13262072 atacaatcagtggtgttcacaaatacaatgcaat--aaagactctagacttgtgaatttctaagatgtatcaaatcagtacagaaattcaa 13261984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 17961181 - 17961223
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct 187  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  17961181 atacaatcagtggtgttcacaatacaatgcaa-tgaaagactct 17961223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29461612 - 29461556
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  29461612 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 29461556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29472464 - 29472408
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  29472464 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 29472408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 4175156 - 4175109
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  4175156 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 4175109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 4404108 - 4404155
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  4404108 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 4404155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 14258463 - 14258416
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  14258463 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 14258416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 37866281 - 37866328
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  37866281 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 37866328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 37885414 - 37885461
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  37885414 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 37885461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 39673282 - 39673235
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  39673282 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 39673235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 14322091 - 14322034
Alignment:
Q  144 atacagtcagtggtgttcac-aatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||||||||  |||||||    
T  14322091 atacaatcagtggtgttcacaaatacaatgcaat--aaagactctagacttgtgaatttc 14322034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 18006126 - 18006158
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  18006126 atacaatcagtggtgttcacaatacaatgcaat 18006158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 28473863 - 28473993
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||||| |    ||||    
T  28473863 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaacgtgcttttg 28473962  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    ||||||||||||||||||||||||| |||||    
T  28473963 agaaacaattttggcagagtttgggcgcttt 28473993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 52351129 - 52350998
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----ttt 238  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||     |||    
T  52351129 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgcttttt 52351030  T
Q  239 gagaaacaattttggcagagtttgggtgcttt 270  Q
    ||||||||| |||||||||||||||| |||||    
T  52351029 gagaaacaaatttggcagagtttgggcgcttt 52350998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 5929341 - 5929471
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||| ||    ||||    
T  5929341 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcacagtgcttttg 5929440  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||||||||||||||| |||||    
T  5929441 agaaacaaatttggcagagtttgggcgcttt 5929471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 8450790 - 8450858
Alignment:
Q  30 caacatgtattgattcaaaacaataccaaatagattacatgttacttaatactcacaaatcactgactg 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8450790 caacatgtattgattcaaaacaataccaaatagattacatgttacttaatactcacaaatcactgactg 8450858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 20251408 - 20251541
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactc--tagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagtt---- 237  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||  | |||||| |||| |||||||||||||||||||        
T  20251408 atacaatcagtggtgttcacaatacaatgcaattgaaagactctatagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagttcttt 20251507  T
Q  238 -tgagaaacaattttggcagagtttgggtgcttt 270  Q
     || ||||||| ||||| |||||||||| |||||    
T  20251508 gtgtgaaacaaatttggtagagtttgggcgcttt 20251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 24029132 - 24029000
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------tt 237  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||  | |||||| |||| |||||||||||||||||      |     
T  24029132 atacaatcagtggtgttcacaatacaatgcagtttaaagactctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgctttta 24029033  T
Q  238 tgagaaacaattttggcagagtttgggtgcttt 270  Q
    || ||||||||||| |||||||||||| |||||    
T  24029032 tgtgaaacaattttagcagagtttgggcgcttt 24029000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 22642527 - 22642661
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||||||||||||||          
T  22642527 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgcttt 22642626  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| |||||||||||||||| |||||    
T  22642627 tgtgtgaaacaaatttggcagagtttgggcgcttt 22642661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 44200649 - 44200778
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    | ||    
T  44200649 atacaatcagtggtgttcacaatacaatgcaag-gaaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttatg 44200747  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
     |||||||||||||||||||||||| |||||    
T  44200748 tgaaacaattttggcagagtttgggcgcttt 44200778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 46181323 - 46181194
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  46181323 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 46181225  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| |||||||||||||||| |||||    
T  46181224 agaatcaaatttggcagagtttgggcgcttt 46181194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 22655109 - 22655243
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||| | |||| |||||||||||||||||          
T  22655109 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatctcaaataaacacagaaattcaaagtgcttt 22655208  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| |||||||||||||||| |||||    
T  22655209 tgtgtgaaacaaatttggcagagtttgggcgcttt 22655243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 26548705 - 26548611
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||| ||||||||||||    
T  26548705 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacactgaaattcaaagt 26548611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 17370674 - 17370768
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactc--tagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  17370674 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctatagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 17370768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 19037647 - 19037772
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactctag--acttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----tttgagaaa 244  Q
    |||||||||||||||| |||||||||||||||||||||  |   |||||||||  | |||||| ||||||||| ||||||||||||     |||||||||    
T  19037647 agtggtgttcacaataaaatgcaattgaaagactctagaaaaaaaagaatttctaagatatatcaaatcaacaaagaaattcaaagtgctttttgagaaa 19037746  T
Q  245 caattttggcagagtttgggtgcttt 270  Q
    ||| |||||||||||||||| |||||    
T  19037747 caaatttggcagagtttgggcgcttt 19037772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 20798702 - 20798830
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    |||     
T  20798702 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttt 20798799  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  20798800 agaatcaaatttggcagagttttggcgcttt 20798830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 22610418 - 22610290
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    |||     
T  22610418 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttt 22610321  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  22610320 agaatcaaatttggcagagttttggcgcttt 22610290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 14388570 - 14388480
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  14388570 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 14388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20884326 - 20884197
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||||| ||||||   |||||||||| ||    ||||    
T  20884326 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcagagtgcttttg 20884228  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  20884227 agaatcaaatttggcagagttttggcgcttt 20884197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 41133060 - 41132970
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  41133060 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 41132970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 45071072 - 45070943
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||  | |||||| ||||||   |||||||||||||    ||||    
T  45071072 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaggaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 45070974  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  45070973 agaatcaaatttggcagagttttggcgcttt 45070943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 20867297 - 20867177
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||| ||||||||||||||||||| |  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  20867297 atacaatcagtagtgttcacaatacaatgcagta-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 20867199  T
Q  240 agaaacaattttggcagagttt 261  Q
    |||| ||| |||||||||||||    
T  20867198 agaatcaaatttggcagagttt 20867177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 34255965 - 34255871
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||| || ||||| ||||||  |||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  34255965 atacaatcagtggtgttcacaatacaatacagttgaaggactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 34255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 18311416 - 18311288
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttg- 239  Q
    ||||| |||||||||||||||||||||||||||  || ||||||| ||||||||||||   | |||||| ||||||   |||||||||||||   ||||     
T  18311416 atacaatcagtggtgttcacaatacaatgcaat--aaggactctaaacttaagaatttttaagatatatcaaatcagtgcagaaattcaaagtgctttgt 18311319  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| ||||||||    
T  18311318 agaatcaaatttggcagagttttggtgcttt 18311288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 23926696 - 23926783
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  23926696 atacaatcagtggtgttcacagtacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 23926783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 675209 - 675265
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  675209 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttc 675265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 20196135 - 20196079
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  20196135 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 20196079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 22018964 - 22019102
Alignment:
Q  144 atacagtcagtggtgttcacaata----caatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-- 235  Q
    ||||| ||||||||||||||||||    ||||||||||||||||||||  |||||||||||||||  | |||||| |||| | |||| ||||||||||      
T  22018964 atacaatcagtggtgttcacaatatatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgatcacaaaaattcaaagtg 22019063  T
Q  236 ----tttgagaaacaattttggcagagtttgggtgcttt 270  Q
        | || ||||||| |||||||||||||||| |||||    
T  22019064 cttttgtgtgaaacaaatttggcagagtttgggcgcttt 22019102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 28379627 - 28379687
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||| |||| ||  |||||||||||||||||||    
T  28379627 atacaatcagtggtgttcacaatacaatgcaaatgaatgactctctagacttaagaatttc 28379687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 19170774 - 19170731
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct 187  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  19170774 atacaatcagtggtgttcacaatacaatgcaaatgaaagactct 19170731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 12944973 - 12945020
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  12944973 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagactt 12945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 21543671 - 21543712
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagact 185  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  21543671 atacaatcagtggtgttcacaatacaatgcaaatgaaagact 21543712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 11195505 - 11195456
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaattt 201  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  11195505 tcagtggtgttatcaatacaatgcaat--aaagactctagacttaagaattt 11195456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 148656 - 148600
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  148656 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 148600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 154731 - 154675
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  154731 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 154675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 5973522 - 5973578
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  5973522 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 5973578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 19178723 - 19178770
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  19178723 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 19178770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 19187602 - 19187649
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  19187602 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 19187649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 23580769 - 23580722
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  23580769 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 23580722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 47195026 - 47195112
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||| | ||  |||||||||||||||  |||||||  | |||||| ||||||   ||||||||||    
T  47195026 atacaatcagtggtgttcacaatacaatacgat--aaagactctagacttttgaatttctaagatatatcaaatcagtgcagaaattca 47195112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20647029 - 20646898
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----ttt 238  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||     |||    
T  20647029 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgtttttt 20646930  T
Q  239 gagaaacaattttggcagagtttgggtgcttt 270  Q
    | ||||||| |||||||||||||||| |||||    
T  20646929 gtgaaacaaatttggcagagtttgggcgcttt 20646898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 22755105 - 22755191
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  22755105 tcagcggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagt 22755191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 19313437 - 19313308
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| |||||||  |||||||||||||    ||||    
T  19313437 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttg 19313339  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||||||||||||||| |||||    
T  19313338 agaaacaaatttggcagagtttgggcgcttt 19313308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 19498410 - 19498287
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||| ||||||  ||||||||||| ||    ||||    
T  19498410 atacaatcagtggtgttcacaatacaatgcaat-gaaagactctagacttaagaatttctaagatatatcaaatcagtacagaaattcacagtgcttttg 19498312  T
Q  240 agaaacaattttggcagagtttggg 264  Q
    |||| ||| ||||||||||||||||    
T  19498311 agaatcaaatttggcagagtttggg 19498287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 19300430 - 19300301
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| |||||||   ||||||||||||    ||||    
T  19300430 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcaatgtagaaattcaaagtgcttttg 19300332  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||| |||||||| |||||    
T  19300331 agaaacaaatttggcaaagtttgggcgcttt 19300301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 24814987 - 24814893
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  24814987 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 24814893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 23393140 - 23393046
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  23393140 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 23393046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 38033251 - 38033163
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||    || ||||||  |||||||| |||||||||||||||||||||||    
T  38033251 atacaatcagtggtgttcacaatataatgcaattgaaagactctag----aaaaatttctaaaatatatcaaatcaacacagaaattcaaagt 38033163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 24802020 - 24801927
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| ||||  |||||||||||| ||||    
T  24802020 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaat-gacacagaaattctaagt 24801927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 967922 - 967832
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| | ||||   ||||||||||||||    
T  967922 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcatatcagtgcagaaattcaaagt 967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1041959 - 1042049
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  1041959 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 1042049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 17969628 - 17969538
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  17969628 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 17969538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 22763464 - 22763550
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  22763464 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 22763550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 22774168 - 22774254
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  22774168 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 22774254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 24274835 - 24274925
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||| |||||    
T  24274835 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattaaaagt 24274925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1083642 - 1083736
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||| ||| |||||||  |||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  1083642 atacaatcaatggtgttcacaatacaatgcaaatgagagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 1083736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1088993 - 1089087
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||| ||| |||||||  |||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  1088993 atacaatcaatggtgttcacaatacaatgcaaatgagagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 1089087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 17970688 - 17970632
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17970688 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 17970632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 28065329 - 28065273
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28065329 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 28065273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 36785210 - 36785161
Alignment:
Q  151 cagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36785210 cagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 36785161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 19356129 - 19356203
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatca 219  Q
    ||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||  | |||||| ||||||    
T  19356129 atacaatcagtggtgttcacaatacaatgc-agtaaaagactctagacttaagaatttctaagatatatcaaatca 19356203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 27978800 - 27978744
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  27978800 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 27978744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 2561298 - 2561354
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  2561298 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 2561354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 18769323 - 18769267
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  18769323 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 18769267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 24415439 - 24415383
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  24415439 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 24415383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 24428004 - 24427948
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  24428004 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 24427948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 26866882 - 26866938
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||  |||||||    
T  26866882 atacaatcagtggtgttctcaatacaatgcaat--aaagactctagacttgtgaatttc 26866938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 26879471 - 26879527
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||  |||||||    
T  26879471 atacaatcagtggtgttctcaatacaatgcaat--aaagactctagacttgtgaatttc 26879527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 16768753 - 16768800
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  16768753 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 16768800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 29244032 - 29244079
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  29244032 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 29244079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 29254611 - 29254658
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  29254611 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 29254658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 43082464 - 43082511
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  43082464 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 43082511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 43093073 - 43093120
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  43093073 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 43093120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 8999419 - 8999327
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  8999419 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagt 8999327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 11087529 - 11087396
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactc--tagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---ttt 238  Q
    ||||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||  | |||||| |||| |||||||||||||||||   |||    
T  11087529 atacaatcagtggtgttcacaatgcaatgcaattgaaagactctatagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgcttt 11087430  T
Q  239 g--agaaacaattttggcagagtttgggtgcttt 270  Q
    |   ||||||| |||||||||||||||| |||||    
T  11087429 gtatgaaacaaatttggcagagtttgggcgcttt 11087396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 24882901 - 24882772
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt----ttg 239  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| |||| |   ||||||||||||||    |||    
T  24882901 atacaatcagcggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaattagtgcagaaattcaaagtgcttttg 24882803  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||||||||||||    
T  24882802 agaatcaaatttggcagagtttgggtgcttt 24882772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 4433066 - 4432972
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||  | |||||| |||| || |||||||||||||||    
T  4433066 atacaatcagtggtgttcacaatacaatgccattgaaagactctctagacttaagaatttctaagatatatcaaattaaaacagaaattcaaagt 4432972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 13175090 - 13174957
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaa-----gt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||  | |||||| |||| |||||| |||||||||      |    
T  13175090 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaacaatttctaagatatatcaaatgaacacaaaaattcaaaatgcttt 13174991  T
Q  237 ttgagaaacaattttggcagagtttgggtgcttt 270  Q
     || ||||||| |||||||||||||||| |||||    
T  13174990 gtgtgaaacaaatttggcagagtttgggcgcttt 13174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 15216136 - 15216264
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    |||     
T  15216136 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttt 15216233  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  15216234 agaatcaaatttggcagagttttggcgcttt 15216264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 3476821 - 3476731
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  3476821 atacaatcagcggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 3476731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 18418934 - 18419024
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  18418934 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 18419024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 18441015 - 18441105
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  18441015 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 18441105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 26210029 - 26209939
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||   | |||||| ||||||   ||||||||||||||    
T  26210029 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttataagatatatcaaatcagtgcagaaattcaaagt 26209939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 4412493 - 4412399
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||| ||| |||||||||||  |||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  4412493 atacaatcaatggtgttcacaatacaatacaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 4412399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 29589820 - 29589940
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaacaa 247  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||| |||| |||    
T  29589820 agtggtgttcacattacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgctttttagaatcaa 29589917  T
Q  248 ttttggcagagtttgggtgcttt 270  Q
     ||||||||||||| || |||||    
T  29589918 atttggcagagttttggcgcttt 29589940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 8933383 - 8933473
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||  | || ||| ||||||   ||||||||||||||    
T  8933383 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 8933473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 13682139 - 13682229
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||||  |||||||||||||||| |||||||  | |||||| ||||||   ||||||||||||||    
T  13682139 atacaatcaatggtgttcacaatacaatgcaat--aaagactctagacttatgaatttctaagatatatcaaatcagtgcagaaattcaaagt 13682229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 48382007 - 48382097
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  48382007 atacaatcaatggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 48382097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 12734645 - 12734589
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  12734645 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttc 12734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 38403691 - 38403601
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||  | || ||| ||||||   ||||||||||||||    
T  38403691 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttctaagatgtatcaaatcagtgcagaaattcaaagt 38403601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 602394 - 602452
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||| | | ||||||| ||||| ||||||||    
T  602394 atacaatcagtggtgttcacaatacaatgcaaataacagactcttgactttagaatttc 602452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 38594191 - 38594104
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaa 233  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||  |||||||  | || ||| ||||||  ||||||||||||    
T  38594191 atacaatcagtggtgttctcaatacaatgcaat--aaagactctagacttgtgaatttctaagatgtatcaaatcagtacagaaattcaa 38594104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 1367450 - 1367506
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  1367450 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 1367506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 3165555 - 3165611
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  3165555 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 3165611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 15888808 - 15888752
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  15888808 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 15888752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 30049340 - 30049396
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  30049340 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 30049396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 44280315 - 44280371
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  44280315 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 44280371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 540905 - 540952
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  540905 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 540952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 5685339 - 5685386
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  5685339 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 5685386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 9433090 - 9433131
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    |||||||||||||||||||||| ||||  |||||||||||||||    
T  9433090 tcagtggtgttcacaatacaatacaat--aaagactctagactt 9433131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 9443686 - 9443727
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    |||||||||||||||||||||| ||||  |||||||||||||||    
T  9443686 tcagtggtgttcacaatacaatacaat--aaagactctagactt 9443727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 40055233 - 40055176
Alignment:
Q  144 atacagtcagtggtgttcac-aatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||||||||  |||||||    
T  40055233 atacaatcagtggtgttcacaaatacaatgcaat--aaagactctagacttgtgaatttc 40055176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 21127864 - 21127993
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttga 240  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||| ||||||||||||   || |     
T  21127864 atacaatcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacatagaaattcaaagtgcttggt 21127963  T
Q  241 gaaacaattttggcagagtttgggtgcttt 270  Q
    ||||||| ||||||||||||| || |||||    
T  21127964 gaaacaaatttggcagagtttaggcgcttt 21127993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 7586666 - 7586580
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  7586666 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagt 7586580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 11205730 - 11205859
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||| ||||||||||||||    ||||    
T  11205730 atacaatcagtggtgttcacaatacaatgcaatc-aaagactctagacttaagaatttctaagatgtatcaaatcaatacagaaattcaaagtgcttttg 11205828  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||||||||||||||| |||||    
T  11205829 agaaacaaatttggcagagtttgggcgcttt 11205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 11235283 - 11235412
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||  | || ||| ||||||  ||||||||||||||    ||||    
T  11235283 atacaatcagtggtgttcacaatacaatgcaat-gaaagactctagacttaagaatttctaagatgtatcaaatcagtacagaaattcaaagtgcttttg 11235381  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||||||||||||||| |||||    
T  11235382 agaaacaaatttggcagagtttgggcgcttt 11235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 31931207 - 31931336
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  31931207 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 31931305  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||||||||| || |||||    
T  31931306 agaaacaaatttggcagagttttggcgcttt 31931336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 22386438 - 22386532
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  22386438 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 22386532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 263
Target Start/End: Complemental strand, 19289792 - 19289670
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  19289792 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctggacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 19289694  T
Q  240 agaaacaattttggcagagtttgg 263  Q
    |||||||| |||||||||||||||    
T  19289693 agaaacaaatttggcagagtttgg 19289670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 18555054 - 18555183
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  18555054 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 18555152  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||| |||||||||| |||||    
T  18555153 agaatcaaatttggtagagtttgggcgcttt 18555183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 19453037 - 19452903
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||| ||||||||||          
T  19453037 atacaatcagtggtgttcataatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacaaaaattcaaagtacttt 19452938  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| |||||||||||||||| |||||    
T  19452937 tgtgtgaaacaaatttggcagagtttgggcgcttt 19452903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 14070580 - 14070501
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||| |  ||||||||||    
T  14070580 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatgagtacagaaattc 14070501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 20635355 - 20635449
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  20635355 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 20635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 12953542 - 12953414
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    |||     
T  12953542 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttt 12953445  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  12953444 agaatcaaatttggcagagttttggcgcttt 12953414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 14051899 - 14051849
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14051899 agtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 14051849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 25518473 - 25518601
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||   | |||||| ||||||   |||||||||| ||    ||||    
T  25518473 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttataagatatatcaaatcagtgcagaaattcagagtgcttttg 25518570  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||||||||| || |||||    
T  25518571 agaaacaaatttggcagagttttggcgcttt 25518601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 22308574 - 22308702
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttg- 239  Q
    ||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||  | || ||| ||||||   |||||||||||||   ||||     
T  22308574 atacaatcagtggtgttcacaatgcaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagtgctttgt 22308671  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| ||||||||    
T  22308672 agaatcaaatttggcagagttttggtgcttt 22308702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 25735968 - 25735882
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  25735968 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 25735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 25679024 - 25679109
Alignment:
Q  145 tacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  25679024 tacaatcagtggtgttcacaatacaatgcaatt--aagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 25679109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 17742114 - 17741986
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||||||| |||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   |||||||||||||    |||     
T  17742114 atacaatcagtggtgctcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagtgcttttt 17742017  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  17742016 agaatcaaatttggcagagttttggcgcttt 17741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 25687160 - 25687074
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||| ||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  25687160 atacaatcagtggtgttcacaatataatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 25687074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 9934083 - 9934027
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  9934083 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttacgaatttc 9934027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 17608822 - 17608728
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||| |||||||  |||||||| ||||||||||  | |||||| |||| |||||| |||||| ||||    
T  17608822 atacaatcaatggtgttcacaatacaatgcaaatgaaagactctctagacataagaatttctaagatatatcaaatgaacacataaattctaagt 17608728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 18826649 - 18826593
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  18826649 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 18826593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 18835044 - 18834988
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  18835044 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 18834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 29765321 - 29765377
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  29765321 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 29765377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 27166847 - 27166797
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  27166847 tcagtggtgttcacaatacaatgcaat--aaagactctagacttatgaatttc 27166797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 17063984 - 17064100
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt----ttg 239  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||   ||  ||||||||  | |||||| |||||||  ||||||||||||||    |||    
T  17063984 atacaatcagtggtgttctcaatacaatgcaata-aaagactct---ct--agaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttg 17064077  T
Q  240 agaaacaattttggcagagtttg 262  Q
    |||||||||||||||||||||||    
T  17064078 agaaacaattttggcagagtttg 17064100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 4292511 - 4292567
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  4292511 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 4292567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 31572200 - 31572256
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  31572200 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 31572256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 17746188 - 17746138
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    |||||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  17746188 tcagtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 17746138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 5844872 - 5844928
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| || ||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  5844872 atacaatcggtggtgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 5844928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 12353341 - 12353397
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  12353341 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 12353397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 12827478 - 12827534
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  12827478 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 12827534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 25787487 - 25787543
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  25787487 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 25787543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 9112905 - 9112858
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  9112905 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 9112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 9123542 - 9123495
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  9123542 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 9123495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 17047401 - 17047461
Alignment:
Q  207 atatataaaatcaacacagaaattcaaagt-----ttgagaaacaattttggcagagtttg 262  Q
    |||||| ||||||| |||||||||||||||     || |||||||||||||||||||||||    
T  17047401 atatatcaaatcaaaacagaaattcaaagtgctttttcagaaacaattttggcagagtttg 17047461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 32625 - 32748
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttga 240  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||| ||||||||||||   || |     
T  32625 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctagacttaagaatttctaagatatatcaaatcaacaaagaaattcaaagtgcttggt 32724  T
Q  241 gaaacaattttggcagagtttggg 264  Q
    ||||||| ||||||||||||||||    
T  32725 gaaacaaatttggcagagtttggg 32748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 1480 - 1388
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  1480 atacaatcagtggtgttcacaatacaatgcaattgagagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagt 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 40783 - 40697
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||||||||    
T  40783 tcagtggttttcacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagt 40697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 59335 - 59243
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||| |||||||||||    
T  59335 atacaatcagtgatgtttacaatacaatgcaattgaaagactctagacttaagaatttctaagatatatcaaatcaacacaaaaattcaaagt 59243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 175147 - 175197
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    |||||| ||||||||||||||||||||  |||||||||||||||  |||||||    
T  175147 tcagtgatgttcacaatacaatgcaat--aaagactctagacttgtgaatttc 175197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 9e-30; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 8031659 - 8031745
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||| |||||||||||||||||||||||    
T  8031659 tcagtggtgttcacaatacaatgcaattgaaagactctaaacttaagaatttctaagatatatcaaatcaacacagaaattcaaagt 8031745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 19460820 - 19460937
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaac 245  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||| |||||||  |||||||||||||    ||||||||||    
T  19460820 tcagtggtgttcacaatacaatgcaat-gaaagactctagacttaagaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttgagaaac 19460918  T
Q  246 aattttggcagagtttggg 264  Q
    || ||||||||||||||||    
T  19460919 aagtttggcagagtttggg 19460937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 19558498 - 19558615
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaac 245  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||| |||||||  |||||||||||||    ||||||||||    
T  19558498 tcagtggtgttcacaatacaatgcaat-gaaagactctagacttaagaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttgagaaac 19558596  T
Q  246 aattttggcagagtttggg 264  Q
    || ||||||||||||||||    
T  19558597 aagtttggcagagtttggg 19558615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 270
Target Start/End: Complemental strand, 23271643 - 23271512
Alignment:
Q  143 catacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----tt 237  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||  | |||||| ||||||||||||||||||||||     ||    
T  23271643 catacaatcagtggtgttcacaatacaatgcaat-gaaagactctagacttaaaaatttctaagatatatcaaatcaacacagaaattcaaagtgctttt 23271545  T
Q  238 tgagaaacaattttggcagagtttgggtgcttt 270  Q
    || ||||||| |||| ||||||||||| |||||    
T  23271544 tgtgaaacaaatttgacagagtttgggcgcttt 23271512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 29379204 - 29379298
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||||||||    
T  29379204 atacaatcagtggtgttcacaatacaatgcaattgaaagattctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagt 29379298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 17519584 - 17519490
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||  | |||||| |||| ||||||||||||||||||    
T  17519584 atacaatcagtggtgttcacaatacaatgcaattcaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagt 17519490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 21288029 - 21288123
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| ||||    
T  21288029 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaaaatatatcaaatgaacacagaaattctaagt 21288123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 45568442 - 45568348
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  45568442 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 45568348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 40002853 - 40002987
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||  |||||||||||||||  | |||||| |||| |||||||||||||||||          
T  40002853 atacaatcagtgatgttcacagtacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgcttt 40002952  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| |||||||||||||||| |||||    
T  40002953 tgtgtgaaacaaatttggcagagtttgggcgcttt 40002987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 21540579 - 21540673
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactc--tagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  21540579 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctttagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 21540673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 3843368 - 3843496
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    |||     
T  3843368 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttt 3843465  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  3843466 agaatcaaatttggcagagttttggcgcttt 3843496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 20260052 - 20259962
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  20260052 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 20259962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 21046682 - 21046592
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  21046682 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 21046592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 21298639 - 21298733
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  ||||||| |||||||||||  ||| |||| |||| ||||||||||||| ||||    
T  21298639 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagaattaagaatttctaaaacatatcaaatgaacacagaaattctaagt 21298733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 22136292 - 22136164
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttga 240  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||||| ||||||   |||||||||| ||   ||| |    
T  22136292 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcagagtgctttta 22136194  T
Q  241 gaaacaattttggcagagtttgggtgcttt 270  Q
    ||| ||| ||||||||||||| || |||||    
T  22136193 gaatcaaatttggcagagttttggcgcttt 22136164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 23370399 - 23370489
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  23370399 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 23370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 22167457 - 22167370
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||    
T  22167457 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattca 22167370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22211824 - 22211767
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  22211824 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttc 22211767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 7018815 - 7018759
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| ||||||||||| |||||||||||||||  ||| ||||||||||||||||||||    
T  7018815 atacaatcagtggtgtttacaatacaatgcaat--aaaaactctagacttaagaatttc 7018759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 30315129 - 30315073
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  30315129 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttatgaatttc 30315073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 18769570 - 18769523
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  18769570 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagactt 18769523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 28903093 - 28903137
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactcta 188  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||    
T  28903093 atacaatcagtggtgttcacaatacaaggcaaatgaaagactcta 28903137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 16746847 - 16746903
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  16746847 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 16746903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 18153584 - 18153640
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  18153584 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttgtgaatttc 18153640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 18158103 - 18158159
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  18158103 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttgtgaatttc 18158159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 19224781 - 19224837
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  19224781 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 19224837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 20161664 - 20161608
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  20161664 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 20161608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 20195803 - 20195859
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  20195803 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 20195859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 23469894 - 23469838
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  23469894 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 23469838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 3220479 - 3220526
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  3220479 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 3220526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 19128595 - 19128642
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  19128595 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 19128642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 19139127 - 19139174
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  19139127 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 19139174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 8094 - 8002
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||| |||||||||||    
T  8094 atacaatcagtggtgttcacaatacaatgcaagtgaaagactctagacttaagaatttctaagatatatcaaatcaacacataaattcaaagt 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 127463 - 127519
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  127463 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 127519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 140621 - 140677
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  140621 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 16422 - 16508
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| ||||||||||||||  | |||||| ||||||   ||||||||||    
T  16422 atacaatcagtggtgttcacaatacaatgcaat--aaagactctcgacttaagaatttctaagatatatcaaatcagtgcagaaattca 16508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 270
Target Start/End: Original strand, 13404754 - 13404881
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag---tttg--aga 242  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| ||||||||||||||||||||||   ||||   ||    
T  13404754 tcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatcaacacagaaattcaaagtgctttgtatga 13404853  T
Q  243 aacaattttggcagagtttgggtgcttt 270  Q
    ||||| |||||||||||||||| |||||    
T  13404854 aacaaatttggcagagtttgggcgcttt 13404881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20168585 - 20168456
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||  ||||||||||||||    ||||    
T  20168585 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtacagaaattcaaagtgcttttg 20168487  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||||||||| || |||||    
T  20168486 agaaacaaatttggcagagttttggagcttt 20168456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1915047 - 1915141
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||||||||    
T  1915047 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagt 1915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20215623 - 20215490
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----t 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||  | |||||| |||| |||||||||||||||||     |    
T  20215623 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctatacttaagaatttctaagatatatcaaatgaacacagaaattcaaagtgcttt 20215524  T
Q  237 ttgagaaacaattttggcagagtttgggtgcttt 270  Q
     || ||||||| |||||||||||||||| |||||    
T  20215523 gtgtgaaacaaatttggcagagtttgggcgcttt 20215490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 263
Target Start/End: Complemental strand, 36096170 - 36096048
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  36096170 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgattttg 36096072  T
Q  240 agaaacaattttggcagagtttgg 263  Q
    |||||||| |||||||||||||||    
T  36096071 agaaacaaatttggcagagtttgg 36096048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 263
Target Start/End: Complemental strand, 36097627 - 36097505
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  36097627 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgattttg 36097529  T
Q  240 agaaacaattttggcagagtttgg 263  Q
    |||||||| |||||||||||||||    
T  36097528 agaaacaaatttggcagagtttgg 36097505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 11208516 - 11208422
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  11208516 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 11208422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 32160379 - 32160473
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||| |||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  32160379 atacaatcagtggtgttcacaatacagtgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 32160473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 40228289 - 40228383
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||  |||||||||||||||  | |||||| |||| ||||||||||||||||||    
T  40228289 atacaatcagtggtgttcacaatataatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattcaaagt 40228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 13533563 - 13533680
Alignment:
Q  156 gtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaacaatttt 251  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    |||||||| ||| |||    
T  13533563 gtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttgagaatcaaattt 13533661  T
Q  252 ggcagagtttgggtgcttt 270  Q
    ||||||||||||| |||||    
T  13533662 ggcagagtttgggcgcttt 13533680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 25112384 - 25112290
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||| ||||||||||  | |||||| |||| ||||||||||||| ||||    
T  25112384 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacgtaagaatttctaagatatatcaaatgaacacagaaattctaagt 25112290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 25171475 - 25171381
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||| ||||||||||  | |||||| |||| ||||||||||||| ||||    
T  25171475 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacgtaagaatttctaagatatatcaaatgaacacagaaattctaagt 25171381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 106639 - 106549
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  106639 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 106549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 32753686 - 32753776
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  32753686 atacaatcagtgatgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 32753776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 35543647 - 35543518
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  35543647 atacaatcagtggtgttcacaatacaatgcaa-taaaagactatagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 35543549  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||| ||| || |||||    
T  35543548 agaatcaaatttggcagatttttggcgcttt 35543518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 40033266 - 40033180
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaagactct--agacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||||||||  | || ||| |||| ||||||||||||||||||    
T  40033266 agtggtgttcacaatacaatgcaaatgaatgactctctagacttaagaatttctaagatttatcaaatgaacacagaaattcaaagt 40033180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20417423 - 20417295
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt----ttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||  | || ||| ||||||   ||||||||||||||    ||     
T  20417423 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttgagaatttctaatatgtatcaaatcagtgcagaaattcaaagtgctattt 20417326  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  20417325 agaatcaaatttggcagagttttggcgcttt 20417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 13522824 - 13522953
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||||||  | |||||| ||||||   |||||||||| ||    ||||    
T  13522824 atacaatcagtggtgttcacaatacaatgcaa-taaaagactccagacttgagaatttctaagatatatcaaatcagtgcagaaattcagagtgcttttg 13522922  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  13522923 agaatcaaatttggcagagtttaggcgcttt 13522953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20625285 - 20625157
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||| ||||||| ||||||||  | || ||| ||||||   |||||||||||||    |||     
T  20625285 atacaatcagtggtgttcacaatacaatgcaat--aaagactatagacttgagaatttctaagatgtatcaaatcagtgcagaaattcaaagtgcttttt 20625188  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  20625187 agaatcaaatttggcagagttttggcgcttt 20625157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 23488151 - 23488194
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct 187  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  23488151 atacaatcagtggtgttcacaatacaatgcaaatgaaagactct 23488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 1108885 - 1108941
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  1108885 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 1108941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 1121643 - 1121699
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  1121643 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 1121699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 8522360 - 8522304
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  8522360 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 8522304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 20798215 - 20798159
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  20798215 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttc 20798159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 23478005 - 23478048
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct 187  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||    
T  23478005 atacaatcagtggtgttcagaatacaatgcaaatgaaagactct 23478048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 5290317 - 5290364
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  5290317 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 5290364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 5300888 - 5300935
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  5300888 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 5300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 17446437 - 17446484
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  17446437 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 17446484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 22559956 - 22559909
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  22559956 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 22559909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 27603159 - 27603206
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  27603159 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 27603206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 27622508 - 27622555
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  27622508 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 27622555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 34772429 - 34772382
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  34772429 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 34772382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 34783374 - 34783327
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  34783374 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 34783327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 61374 - 61499
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----tttgagaaa 244  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||||||| ||||||     | || ||||    
T  61374 agtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaagtcaaagtgctttgtgtgaaa 61473  T
Q  245 caattttggcagagtttgggtgcttt 270  Q
    ||| ||||||||||||||||||||||    
T  61474 caaatttggcagagtttgggtgcttt 61499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 60864 - 60950
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | || ||| |||| ||||||||||||||||||    
T  60864 tcagtggtgttcacaaaacaatgcaattgaaagactctagacttaagaatttctaagatttatcaaatgaacacagaaattcaaagt 60950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 475729 - 475596
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----t 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||| ||||||||||     |    
T  475729 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacataaattcaaagtgcttt 475630  T
Q  237 ttgagaaacaattttggcagagtttgggtgcttt 270  Q
     || ||||||| |||||||||||||||| |||||    
T  475629 gtgtgaaacaaatttggcagagtttgggcgcttt 475596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 482249 - 482116
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----t 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||| ||||||||||     |    
T  482249 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacataaattcaaagtgcttt 482150  T
Q  237 ttgagaaacaattttggcagagtttgggtgcttt 270  Q
     || ||||||| |||||||||||||||| |||||    
T  482149 gtgtgaaacaaatttggcagagtttgggcgcttt 482116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 157104 - 156969
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacag-aaattcaaag----- 235  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||| ||||||||||         
T  157104 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaaattcaaagtgctt 157005  T
Q  236 -tttgagaaacaattttggcagagtttgggtgcttt 270  Q
     | || ||||||| |||||||||||||||| |||||    
T  157004 ttgtgtgaaacaaatttggcagagtttgggcgcttt 156969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 462 - 591
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||||  | |||||| |||||||  |||||||||||||    ||||    
T  462 atacaatcagtggtgttcacaatacaatgcaata-aaagactctaaacttaagaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttg 560  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||| |||||||||||| |||||    
T  561 agaaacaaattttgcagagtttgggcgcttt 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 4842 - 4971
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||||  | |||||| |||||||  |||||||||||||    ||||    
T  4842 atacaatcagtggtgttcacaatacaatgcaata-aaagactctaaacttaagaatttctaagatatatcaaatcaatgcagaaattcaaagtgcttttg 4940  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||| |||||||||||| |||||    
T  4941 agaaacaaattttgcagagtttgggcgcttt 4971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 59731 - 59602
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  59731 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 59633  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| |||||||||||||||| |||||    
T  59632 agaatcaaatttggcagagtttgggcgcttt 59602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 2151 - 2017
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||||| ||||||||||          
T  2151 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacaaaaattcaaagtacttt 2052  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| |||||||||||||||| |||||    
T  2051 tgtgtgaaacaaatttggcagagtttgggcgcttt 2017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 4751 - 4845
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |  ||||| |||| ||||||||||||||||||    
T  4751 atacaatcagtggtgttcacaatacaatgcaattgaaagactctctagacttaagaatttctaagctatatcaaatgaacacagaaattcaaagt 4845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 1021 - 1150
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  1021 atacaatcagtggtgttcacaatacaatgcaaca-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 1119  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||| ||||||||||| |||||    
T  1120 agaaacaaatttgacagagtttgggcgcttt 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 1636 - 1765
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||||    
T  1636 atacaatcagtggtgttcacaatacaatgcaaca-aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 1734  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| |||| ||||||||||| |||||    
T  1735 agaaacaaatttgacagagtttgggcgcttt 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 534 - 663
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||  | |||||| ||||||  ||||||||||||||    ||||    
T  534 atacaatcagtggtgttcacaatacaatgcaata-aaagactctagacttaggaatttctaagatatatcaaatcagtacagaaattcaaagtgcttttg 632  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||||||| ||||||| ||||| || |||||    
T  633 agaaacaaatttggcaaagttttggcgcttt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 4376 - 4242
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag------ 235  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| |||          
T  4376 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagtgcttt 4277  T
Q  236 tttgagaaacaattttggcagagtttgggtgcttt 270  Q
    | || ||||||| ||| ||||||||||||||||||    
T  4276 tatgtgaaacaaattttgcagagtttgggtgcttt 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 5976 - 6070
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactc--tagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  5976 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctatagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 6070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 6915 - 7009
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  6915 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 7009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 2291 - 2197
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  2291 atacaatcagtggtgttcacaacacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 865 - 771
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  | |||||| |||| |||| |||||||| ||||    
T  865 atacaatcagtggtgttcacaatacaatgcaattgaaagaatctctagacttaagaatttctaagatatatgaaatgaacatagaaattctaagt 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 57222 - 57175
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  57222 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagactt 57175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 20851 - 20762
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||  | |||||| |||| |||||||||||||    
T  20851 atacaatcagtggtgttcacaatacaatgcaaatgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattc 20762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 10231 - 10103
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||  | |||||| ||||||   |||||||||||||    ||||    
T  10231 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaggaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 10133  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    || ||||| ||||||||||||||||| ||||    
T  10132 ag-aacaaatttggcagagtttgggtacttt 10103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 35354 - 35444
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  35354 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 35444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 29238 - 29109
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  | |||||| |||| |   |||||||||| ||    ||||    
T  29238 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaagaatttctaagatatatcaaattagtgcagaaattcagagtgcttttg 29140  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| |||||||||||||||| |||||    
T  29139 agaatcaaatttggcagagtttgggcgcttt 29109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 29301 - 29409
Alignment:
Q  156 gtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaacaatttt 251  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  | |||||| |||||| | |||||||||| ||    |||||||| ||| |||    
T  29301 gtgttcacaatacaatgcaat-gaaagactctagacttaagaatttctaagatatatcaaatcagcgcagaaattcagagtgcttttgagaatcaaattt 29399  T
Q  252 ggcagagttt 261  Q
    ||||||||||    
T  29400 ggcagagttt 29409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 6931 - 6837
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||| |||||||| ||||||||||||||||||  |||||||||||||||||||  | |||||| |||| ||||||||||||| ||||    
T  6931 atacaatcagtgttgttcacattacaatgcaattgaaagactctctagacttaagaatttctaagatatatcaaatgaacacagaaattctaagt 6837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 1413 - 1324
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||  | ||| || |||| |||| ||||||||    
T  1413 atacagtcagtggtgttcagaatacaatgcaattgaaagactctctagacttaagaatttctaagatacatcaaatgaacatagaaattc 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 1606 - 1517
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||  | ||| || |||| |||| ||||||||    
T  1606 atacagtcagtggtgttcagaatacaatgcaattgaaagactctctagacttaagaatttctaagatacatcaaatgaacatagaaattc 1517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 5112 - 5240
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   |||||||||||||    |||     
T  5112 atacaatcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatgtatcaaatcagtgcagaaattcaaagtgcttttt 5209  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  5210 agaatcaaatttggcagagttttggcgcttt 5240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 11400 - 11488
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||||||||||||||||| |||||||  |||||||| ||||||||||  | |||||| |||| ||||||||||||| ||||    
T  11400 tcagtggtgttcacaatacaatgcaaatgaaagactctctagacataagaatttctaagatatatcaaatgaacacagaaattctaagt 11488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 38438 - 38309
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttg 239  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||| ||| ||  | |||||| ||||||   |||||||||||||    ||||    
T  38438 atacaatcagtggtgttcacaatacaatgcaa-taaaagactctagacttaaaaatgtctaagatatatcaaatcagtgcagaaattcaaagtgcttttg 38340  T
Q  240 agaaacaattttggcagagtttgggtgcttt 270  Q
    |||| ||| ||||||||||||| || |||||    
T  38339 agaatcaaatttggcagagttttggcgcttt 38309  T

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Target: scaffold0410 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 15544 - 15664
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----ttt 238  Q
    ||||| |||||||||||||||||| |||||||   ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||     |||    
T  15544 atacaatcagtggtgttcacaatataatgcaac--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtgcttttt 15641  T
Q  239 gagaaacaattttggcagagttt 261  Q
    ||||||||| ||| |||||||||    
T  15642 gagaaacaaatttagcagagttt 15664  T

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Target: scaffold0739 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1810 - 1900
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||  | |||||| |||||    ||||||||||||||    
T  1810 atacaatcaatggtgttcacaatacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatccgtgcagaaattcaaagt 1900  T

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Target: scaffold0407 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 12550 - 12500
Alignment:
Q  150 tcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  12550 tcagtggtgttcacaatacaatgcaat--aaagactctagacttaagaatttc 12500  T

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Target: scaffold0142 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 40318 - 40408
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||||  | || ||| ||||||   ||||||||||||||    
T  40318 atacaatcagtggtgtttacaatacaatgcaat--aaagactctagacttaagaatttctaatatgtatcaaatcagtgcagaaattcaaagt 40408  T

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Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 10355 - 10444
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||| |||||||||||||||||||||| ||| |||||||  |||| ||||||||||||||  | |||||| |||| |||||| ||||||    
T  10355 atacaatcagtggtgttcacaatacaattcaaatgaaagactctcttgacttaagaatttctaagatatatcaaatgaacacataaattc 10444  T

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Target: scaffold0207; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 20265 - 20345
Alignment:
Q  153 gtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattc 231  Q
    ||||||||||||||||||||||| ||||| |  |||| ||||||||||||||  | |||||| |||| |||| ||||||||    
T  20265 gtggtgttcacaatacaatgcaaatgaaaaactctcttgacttaagaatttctaagatatatcaaatgaacatagaaattc 20345  T

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Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 16349 - 16455
Alignment:
Q  166 tacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag----tttgagaaacaattttggcagagttt 261  Q
    |||||||||||  ||||||||||||||||||||||||  | |||||| ||||||   |||||||||||||    ||| |||| ||| |||||||||||||    
T  16349 tacaatgcaat--aaagactctagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagtactttttagaatcaaatttggcagagttt 16446  T
Q  262 gggtgcttt 270  Q
     ||||||||    
T  16447 tggtgcttt 16455  T

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Target: scaffold0664 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 1005 - 1121
Alignment:
Q  153 gtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaag-----tttgagaaacaa 247  Q
    ||||||||||||||||||||||| ||||||||||      ||||||||||  | |||||| |||| ||||||||||||| |||     |||| |||||||    
T  1005 gtggtgttcacaatacaatgcaaatgaaagactc------taagaatttctaagatatatcaaatgaacacagaaattctaagtgctttttgtgaaacaa 1098  T
Q  248 ttttggcagagtttgggtgcttt 270  Q
      ||||||||||||||| |||||    
T  1099 aattggcagagtttgggcgcttt 1121  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 35280 - 35323
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactct 187  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  35280 atacaatcagtggtgttcacaatacaatgcaaatgaaagactct 35323  T

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Target: scaffold0497 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 10727 - 10637
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||||||||||||||||||||||  |||  |||||||||| ||||||||  | || ||| ||||||   ||||||||||||||    
T  10727 atacaatcagtggtgttcacaatacaatgcaat--aaattctctagacttgagaatttctaagatgtatcaaatcagtgcagaaattcaaagt 10637  T

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Target: scaffold0072 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 37173 - 37087
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattca 232  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||  |||||||  | |||||| ||||||   ||||||||||    
T  37173 atacaatcagtggtgttcacaatacaatacaat--aaagactctagacttttgaatttctaagatatatcaaatcagtgcagaaattca 37087  T

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Target: scaffold2071 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 911 - 820
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    ||||| |||||||| ||||||||||||||||| | | | ||| ||||||||||||||||  | |||||| ||||||   ||||||||||||||    
T  911 atacaatcagtggttttcacaatacaatgcaa-taatatactttagacttaagaatttctaagatatatcaaatcagtgcagaaattcaaagt 820  T

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Target: scaffold0132 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 38554 - 38468
Alignment:
Q  152 agtggtgttcacaatacaatgcaattgaaaga--ctctagacttaagaatttcacaaatatataaaatcaacacagaaattcaaagt 236  Q
    |||||||||||| ||||||||||| |||||||  |||||| ||||||||||||  | |||||| |||  |||||| |||||| ||||    
T  38554 agtggtgttcactatacaatgcaaatgaaagactctctagccttaagaatttctaagatatatcaaaggaacacataaattctaagt 38468  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 14400 - 14456
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  14400 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 14456  T

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Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 54562 - 54506
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagacttaagaatttc 202  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||||||  |||||||    
T  54562 atacaatcagtggtgttcacaatacaatacaatt--aagactctagacttttgaatttc 54506  T

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Target: scaffold0747 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 2507 - 2554
Alignment:
Q  144 atacagtcagtggtgttcacaatacaatgcaattgaaagactctagactt 193  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  2507 atacaatcagtggtgttcacaatacaatacaat--aaagactctagactt 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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