View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5359_high_3 (Length: 605)

Name: NF5359_high_3
Description: NF5359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5359_high_3
NF5359_high_3
[»] chr5 (30 HSPs)
chr5 (237-596)||(22618873-22619232)
chr5 (96-221)||(13203957-13204083)
chr5 (96-221)||(21018223-21018349)
chr5 (97-221)||(4824941-4825066)
chr5 (96-221)||(2970984-2971110)
chr5 (96-221)||(35317699-35317825)
chr5 (96-220)||(1191543-1191668)
chr5 (96-220)||(40177624-40177749)
chr5 (19-97)||(22618811-22618889)
chr5 (127-221)||(31909387-31909481)
chr5 (95-221)||(12257355-12257482)
chr5 (100-221)||(8734000-8734123)
chr5 (96-214)||(27721431-27721550)
chr5 (95-221)||(29265874-29266001)
chr5 (99-220)||(6020995-6021117)
chr5 (96-221)||(21112049-21112175)
chr5 (97-220)||(17984745-17984869)
chr5 (96-198)||(9576986-9577089)
chr5 (96-221)||(3386895-3387028)
chr5 (96-221)||(11124652-11124778)
chr5 (95-221)||(32143416-32143531)
chr5 (99-218)||(28591355-28591475)
chr5 (126-221)||(23262579-23262670)
chr5 (96-221)||(35545933-35546059)
chr5 (96-221)||(2786271-2786396)
chr5 (107-221)||(14270535-14270650)
chr5 (105-183)||(3049094-3049173)
chr5 (96-161)||(30127894-30127960)
chr5 (156-220)||(41580078-41580142)
chr5 (168-221)||(19181784-19181836)
[»] chr4 (54 HSPs)
chr4 (88-221)||(34739272-34739406)
chr4 (96-221)||(28798390-28798516)
chr4 (96-221)||(45874055-45874181)
chr4 (96-221)||(1173951-1174077)
chr4 (96-221)||(43139908-43140034)
chr4 (93-221)||(26424860-26424988)
chr4 (94-221)||(19849505-19849633)
chr4 (96-221)||(53457824-53457950)
chr4 (96-221)||(18257329-18257455)
chr4 (96-221)||(54768434-54768560)
chr4 (95-221)||(55214651-55214778)
chr4 (96-217)||(238464-238586)
chr4 (96-221)||(12735431-12735557)
chr4 (94-218)||(22607983-22608108)
chr4 (96-221)||(12867841-12867967)
chr4 (104-221)||(23417485-23417603)
chr4 (96-219)||(23710337-23710461)
chr4 (95-221)||(55400227-55400354)
chr4 (98-221)||(19225261-19225385)
chr4 (82-221)||(29581046-29581185)
chr4 (96-221)||(11277982-11278104)
chr4 (96-213)||(37134048-37134166)
chr4 (96-220)||(2864751-2864876)
chr4 (99-219)||(19814108-19814229)
chr4 (126-214)||(39807875-39807963)
chr4 (94-188)||(32441119-32441214)
chr4 (96-221)||(19673931-19674057)
chr4 (96-221)||(12767087-12767213)
chr4 (126-208)||(49030754-49030835)
chr4 (95-211)||(22910269-22910386)
chr4 (95-211)||(22968136-22968253)
chr4 (96-210)||(32778125-32778238)
chr4 (127-214)||(24417887-24417974)
chr4 (128-221)||(516458-516551)
chr4 (128-213)||(52172000-52172085)
chr4 (95-221)||(51287600-51287728)
chr4 (127-221)||(31015014-31015108)
chr4 (156-221)||(1966611-1966676)
chr4 (99-198)||(2075509-2075608)
chr4 (99-185)||(3465755-3465842)
chr4 (116-218)||(24517988-24518091)
chr4 (155-221)||(33770628-33770694)
chr4 (97-213)||(41679375-41679492)
chr4 (99-193)||(16887581-16887676)
chr4 (112-221)||(50033397-50033508)
chr4 (99-221)||(52768303-52768425)
chr4 (113-221)||(2804539-2804646)
chr4 (155-217)||(37620677-37620739)
chr4 (173-221)||(52016080-52016128)
chr4 (173-220)||(23532125-23532172)
chr4 (163-221)||(48822881-48822939)
chr4 (175-221)||(50347331-50347377)
chr4 (102-166)||(46343333-46343400)
chr4 (169-221)||(16555381-16555433)
[»] chr2 (44 HSPs)
chr2 (96-221)||(34460369-34460495)
chr2 (96-221)||(10639608-10639734)
chr2 (96-221)||(33083556-33083682)
chr2 (96-221)||(19537307-19537433)
chr2 (96-221)||(26605624-26605750)
chr2 (96-221)||(11459715-11459841)
chr2 (112-221)||(37197612-37197722)
chr2 (96-221)||(45125167-45125293)
chr2 (96-220)||(11708678-11708803)
chr2 (95-221)||(23839858-23839985)
chr2 (100-221)||(11816552-11816675)
chr2 (95-221)||(19048753-19048880)
chr2 (96-221)||(19816220-19816346)
chr2 (96-221)||(29659220-29659346)
chr2 (96-221)||(39535536-39535662)
chr2 (99-220)||(16654366-16654488)
chr2 (96-221)||(27137920-27138045)
chr2 (95-221)||(39831446-39831572)
chr2 (96-217)||(4851320-4851442)
chr2 (96-221)||(7275888-7276015)
chr2 (100-221)||(42025674-42025797)
chr2 (100-220)||(43684073-43684194)
chr2 (99-220)||(4800879-4801001)
chr2 (96-221)||(15782590-15782715)
chr2 (99-221)||(38440199-38440322)
chr2 (95-220)||(40786212-40786338)
chr2 (112-221)||(43778470-43778580)
chr2 (96-221)||(42578180-42578294)
chr2 (100-174)||(25501832-25501907)
chr2 (95-220)||(7349097-7349223)
chr2 (95-192)||(45201903-45202001)
chr2 (96-221)||(34234530-34234654)
chr2 (143-223)||(20497590-20497670)
chr2 (114-221)||(44181889-44181997)
chr2 (96-221)||(8742600-8742726)
chr2 (97-221)||(34239822-34239947)
chr2 (113-193)||(38400486-38400567)
chr2 (141-220)||(40825161-40825240)
chr2 (128-221)||(21312238-21312329)
chr2 (155-221)||(33001762-33001828)
chr2 (98-221)||(6055006-6055131)
chr2 (148-193)||(12366781-12366826)
chr2 (126-207)||(15072124-15072204)
chr2 (152-192)||(29726072-29726112)
[»] chr1 (44 HSPs)
chr1 (96-221)||(41808202-41808328)
chr1 (94-221)||(32007072-32007200)
chr1 (95-221)||(28455873-28456000)
chr1 (96-221)||(45813013-45813139)
chr1 (95-221)||(5055790-5055917)
chr1 (96-217)||(41761417-41761539)
chr1 (96-221)||(48660022-48660148)
chr1 (94-221)||(20746-20874)
chr1 (95-221)||(192414-192541)
chr1 (103-221)||(39276357-39276476)
chr1 (97-221)||(35945798-35945923)
chr1 (97-221)||(5943682-5943807)
chr1 (95-221)||(29994385-29994512)
chr1 (96-221)||(26032798-26032927)
chr1 (87-217)||(11688254-11688385)
chr1 (95-221)||(13109769-13109896)
chr1 (96-221)||(46447375-46447505)
chr1 (151-221)||(41039305-41039375)
chr1 (99-187)||(29587255-29587344)
chr1 (130-219)||(50106200-50106289)
chr1 (96-221)||(49783707-49783833)
chr1 (96-220)||(2088908-2089033)
chr1 (128-221)||(7059500-7059593)
chr1 (112-220)||(7275697-7275806)
chr1 (98-221)||(21938944-21939068)
chr1 (130-221)||(13097339-13097430)
chr1 (142-221)||(35110101-35110180)
chr1 (99-221)||(778578-778700)
chr1 (96-221)||(4065961-4066087)
chr1 (112-185)||(35224356-35224430)
chr1 (96-220)||(39284290-39284415)
chr1 (96-218)||(25931162-25931277)
chr1 (112-212)||(39111950-39112050)
chr1 (128-220)||(13183179-13183271)
chr1 (95-220)||(3688239-3688365)
chr1 (112-181)||(47111473-47111543)
chr1 (97-193)||(38817229-38817326)
chr1 (141-221)||(26264538-26264618)
chr1 (96-163)||(45294658-45294726)
chr1 (126-193)||(3716642-3716709)
chr1 (157-218)||(3716424-3716485)
chr1 (102-198)||(16770181-16770278)
chr1 (96-221)||(32982352-32982478)
chr1 (97-182)||(9385742-9385826)
[»] chr3 (43 HSPs)
chr3 (95-221)||(4601424-4601551)
chr3 (96-221)||(7824456-7824582)
chr3 (96-221)||(29689484-29689610)
chr3 (96-221)||(54151683-54151809)
chr3 (96-221)||(54158266-54158392)
chr3 (96-221)||(28844504-28844631)
chr3 (95-221)||(43247652-43247779)
chr3 (96-221)||(51665927-51666053)
chr3 (96-217)||(55018040-55018162)
chr3 (96-221)||(1778851-1778977)
chr3 (95-221)||(52500837-52500964)
chr3 (112-220)||(9349679-9349788)
chr3 (93-221)||(35461481-35461610)
chr3 (112-221)||(3112997-3113107)
chr3 (112-221)||(36228996-36229106)
chr3 (95-221)||(42392807-42392934)
chr3 (126-221)||(38257305-38257400)
chr3 (102-221)||(475283-475402)
chr3 (96-221)||(33334608-33334734)
chr3 (96-220)||(7958569-7958694)
chr3 (96-221)||(41377584-41377705)
chr3 (96-221)||(28458663-28458788)
chr3 (96-221)||(29750621-29750746)
chr3 (112-221)||(43775239-43775349)
chr3 (112-214)||(448884-448987)
chr3 (95-221)||(32001426-32001553)
chr3 (96-221)||(40756729-40756856)
chr3 (96-182)||(31255406-31255493)
chr3 (95-221)||(50729523-50729650)
chr3 (95-221)||(50783199-50783326)
chr3 (170-221)||(55320402-55320453)
chr3 (97-221)||(51054702-51054827)
chr3 (129-221)||(47635007-47635099)
chr3 (112-218)||(27230683-27230789)
chr3 (100-166)||(51112521-51112588)
chr3 (107-221)||(8137635-8137748)
chr3 (127-218)||(8151380-8151471)
chr3 (100-221)||(47770329-47770449)
chr3 (97-221)||(2590812-2590928)
chr3 (100-187)||(27396857-27396945)
chr3 (155-207)||(43023695-43023747)
chr3 (99-154)||(45686096-45686152)
chr3 (113-220)||(53182750-53182858)
[»] scaffold1348 (1 HSPs)
scaffold1348 (96-221)||(864-990)
[»] chr8 (43 HSPs)
chr8 (96-221)||(6602520-6602646)
chr8 (96-221)||(6677973-6678099)
chr8 (96-221)||(32333114-32333240)
chr8 (95-221)||(35779499-35779626)
chr8 (96-221)||(28817256-28817382)
chr8 (96-221)||(70525-70651)
chr8 (96-221)||(42192641-42192767)
chr8 (96-221)||(1342-1468)
chr8 (96-221)||(1078650-1078776)
chr8 (96-220)||(7813322-7813447)
chr8 (96-221)||(7792661-7792787)
chr8 (114-221)||(42885192-42885300)
chr8 (96-221)||(4530984-4531110)
chr8 (95-221)||(9292017-9292144)
chr8 (95-221)||(40911220-40911346)
chr8 (95-221)||(12534722-12534847)
chr8 (96-221)||(10963244-10963368)
chr8 (100-221)||(39303313-39303436)
chr8 (96-221)||(6099572-6099698)
chr8 (126-220)||(31532128-31532222)
chr8 (96-221)||(45264642-45264767)
chr8 (96-195)||(18386708-18386808)
chr8 (100-221)||(18752345-18752467)
chr8 (96-221)||(3822396-3822522)
chr8 (126-216)||(5385369-5385459)
chr8 (96-221)||(39435282-39435408)
chr8 (112-221)||(41849234-41849343)
chr8 (95-221)||(31969722-31969849)
chr8 (95-198)||(41753005-41753109)
chr8 (126-221)||(13891121-13891216)
chr8 (96-221)||(29425357-29425477)
chr8 (131-221)||(9775044-9775134)
chr8 (136-221)||(33731466-33731551)
chr8 (97-220)||(40932710-40932834)
chr8 (96-221)||(31695271-31695397)
chr8 (107-221)||(14400726-14400841)
chr8 (112-221)||(7403697-7403806)
chr8 (172-221)||(20269607-20269656)
chr8 (172-221)||(21056236-21056285)
chr8 (96-181)||(22979604-22979690)
chr8 (96-221)||(42364704-42364829)
chr8 (134-221)||(2907054-2907140)
chr8 (112-163)||(22203716-22203768)
[»] scaffold0032 (1 HSPs)
scaffold0032 (95-221)||(56480-56607)
[»] scaffold0044 (1 HSPs)
scaffold0044 (96-221)||(9975-10101)
[»] chr7 (52 HSPs)
chr7 (96-221)||(4106738-4106864)
chr7 (96-221)||(23358185-23358311)
chr7 (96-221)||(31770534-31770660)
chr7 (96-220)||(44083940-44084065)
chr7 (95-221)||(40058237-40058364)
chr7 (100-221)||(43753755-43753878)
chr7 (96-221)||(2146636-2146762)
chr7 (112-221)||(4107325-4107435)
chr7 (96-221)||(25112249-25112375)
chr7 (96-221)||(25546277-25546403)
chr7 (97-221)||(47250253-47250378)
chr7 (126-221)||(47570720-47570815)
chr7 (102-216)||(27229484-27229600)
chr7 (99-221)||(8439081-8439204)
chr7 (127-221)||(38781210-38781304)
chr7 (97-221)||(48146754-48146879)
chr7 (126-218)||(39513988-39514080)
chr7 (96-221)||(7162792-7162916)
chr7 (95-221)||(43203305-43203432)
chr7 (95-220)||(15634882-15635008)
chr7 (96-221)||(47557781-47557907)
chr7 (95-221)||(11355822-11355949)
chr7 (114-221)||(41183833-41183941)
chr7 (96-221)||(5772821-5772947)
chr7 (96-221)||(48444154-48444280)
chr7 (96-219)||(38033729-38033853)
chr7 (107-221)||(5587291-5587406)
chr7 (107-221)||(5592252-5592367)
chr7 (103-221)||(29484757-29484876)
chr7 (96-221)||(32606332-32606458)
chr7 (112-221)||(28603027-28603137)
chr7 (99-208)||(13887174-13887282)
chr7 (96-221)||(43170941-43171067)
chr7 (126-221)||(4001846-4001939)
chr7 (96-198)||(46427360-46427463)
chr7 (96-221)||(10220475-10220600)
chr7 (97-221)||(42081621-42081743)
chr7 (96-213)||(34763454-34763560)
chr7 (173-221)||(19630670-19630718)
chr7 (94-221)||(25872761-25872889)
chr7 (96-221)||(27915582-27915709)
chr7 (111-221)||(35309869-35309980)
chr7 (155-221)||(31288226-31288292)
chr7 (97-220)||(23036208-23036330)
chr7 (95-166)||(29255716-29255788)
chr7 (96-218)||(28110936-28111059)
chr7 (96-198)||(47960980-47961083)
chr7 (140-221)||(35577878-35577959)
chr7 (96-218)||(5462955-5463078)
chr7 (96-218)||(18506281-18506403)
chr7 (96-206)||(25503950-25504059)
chr7 (96-167)||(40642974-40643046)
[»] chr6 (27 HSPs)
chr6 (96-221)||(33704216-33704342)
chr6 (96-221)||(33621494-33621620)
chr6 (95-221)||(4464126-4464253)
chr6 (87-197)||(11571999-11572110)
chr6 (95-221)||(21037290-21037416)
chr6 (95-221)||(28322931-28323058)
chr6 (95-218)||(21000691-21000815)
chr6 (96-221)||(361011-361137)
chr6 (100-221)||(29009652-29009774)
chr6 (94-221)||(24619081-24619209)
chr6 (85-221)||(35218642-35218767)
chr6 (96-218)||(2959149-2959272)
chr6 (127-221)||(19145503-19145596)
chr6 (96-221)||(12252023-12252149)
chr6 (128-221)||(16518456-16518547)
chr6 (96-215)||(10999416-10999536)
chr6 (95-217)||(32289347-32289467)
chr6 (142-193)||(17590392-17590443)
chr6 (146-221)||(22576232-22576307)
chr6 (95-213)||(7487278-7487393)
chr6 (96-175)||(10226540-10226620)
chr6 (126-221)||(584786-584880)
chr6 (170-221)||(28592130-28592181)
chr6 (95-185)||(4610863-4610953)
chr6 (153-220)||(7014313-7014380)
chr6 (135-221)||(32353943-32354028)
chr6 (100-180)||(7197849-7197930)
[»] scaffold0119 (2 HSPs)
scaffold0119 (96-221)||(13953-14079)
scaffold0119 (96-221)||(19633-19759)
[»] scaffold0053 (1 HSPs)
scaffold0053 (107-221)||(22174-22289)
[»] scaffold0038 (1 HSPs)
scaffold0038 (95-221)||(114251-114378)
[»] scaffold0067 (1 HSPs)
scaffold0067 (94-221)||(34816-34945)
[»] scaffold0360 (2 HSPs)
scaffold0360 (95-221)||(14494-14631)
scaffold0360 (154-210)||(14726-14784)
[»] scaffold0352 (1 HSPs)
scaffold0352 (93-221)||(8945-9074)
[»] scaffold0495 (1 HSPs)
scaffold0495 (96-175)||(3259-3339)


Alignment Details
Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 237 - 596
Target Start/End: Original strand, 22618873 - 22619232
Alignment:
Q  237 gaacaaaaagaaagagtacctacaggagcataaggaagcaagaagagccacaaaatatagacagcctcagcaccccacaacccaatttgaagaactctat 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22618873 gaacaaaaagaaagagtacctacaggagcataaggaagcaagaagagccacaaaatatagacagcctcagcaccccacaacccaatttgaagaactctct 22618972  T
Q  337 ttagattctcatctccctctttctcgggcgaggatgtggctaattctgtggatttgcgtcgacctgcggagcacaagtgggttcttctggaattggaaag 436  Q
    |||||||||||||||||||||| || | |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22618973 ttagattctcatctccctctttatccgacgaggatgtggccaactctgtgggtttgcgtcgacctgcggagcacaagtgggttcttctggaattggaaag 22619072  T
Q  437 aacgagtggttttgcagaagagagtgaattgatggagctgaaagggtagtgattgtgaacctgttttggtatgtgccattggagatgatagagtgatgat 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22619073 aacgagtggttttgcagaagagagtgaattgatggagctgaaagggtagtgattgtgaacctgttttggtatgtgccattggagatgatagagtgatgat 22619172  T
Q  537 tttgaggcaaaaggtgaatggaacgaacatagcaatgttggagacaaagctgatgatgtc 596  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  22619173 tttgaggccaaaggtgaatggaatgaacatagcaatgttggagacaaagctgttgatgtc 22619232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 13203957 - 13204083
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttat 13204056  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  13204057 tttcagtggattaccacttcatctaag 13204083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 21018223 - 21018349
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 21018322  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  21018323 tttcagtggattaccacttcatctaag 21018349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 4825066 - 4824941
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagtttatt 4824967  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    |||  |||||||||||||||||||||    
T  4824966 ttcaatggattaccacttcatctaag 4824941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 2970984 - 2971110
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||| ||||| |||||||| |||| | ||||| |||||||||||||||||| |  |||||||||||||||||||||||||    
T  2970984 gtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacagttgtgtgtgagtttat 2971083  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||||||||    
T  2971084 tttcggtggattaccacttcatctaag 2971110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 35317825 - 35317699
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||  ||||| ||| |||||||||| |||||||||||||||||||||||||    
T  35317825 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagtttat 35317726  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  35317725 tttcagtggattaccacttcatctaag 35317699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 1191668 - 1191543
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||     
T  1191668 gtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtttaa 1191569  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||| |||| |||| |||||||||||    
T  1191568 tttcagtggcttacaacttcatctaa 1191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 40177624 - 40177749
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||||| |||||| || ||| |||||||||| |||| |||||||||||||||||    
T  40177624 gtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtttat 40177723  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||| |||||||||||||||||||||    
T  40177724 tttcagtggattaccacttcatctaa 40177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 22618811 - 22618889
Alignment:
Q  19 aaccacatgagcagttattaattcaagaaagcacatccaattccaacacaaactacagataagaacaaaaagaaagagt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22618811 aaccacatgagcagttattaattcaagaaagcacatccaattccaacacaaactacagataagaacaaaaagaaagagt 22618889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 31909481 - 31909387
Alignment:
Q  127 gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31909481 gaaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 31909387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 12257355 - 12257482
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||| |||||| ||||| |||||| |||||||||||| | |||||| | |||||||||||||||    
T  12257355 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagttta 12257454  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  12257455 ttttcagtggattaccacttcatctaag 12257482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 8734000 - 8734123
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-tttatttt 197  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||| ||||  ||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagttttaactt 8734099  T
Q  198 cggtggattaccacttcatctaag 221  Q
    | ||||||||||||||||||||||    
T  8734100 cagtggattaccacttcatctaag 8734123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 27721431 - 27721550
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||  |||||| |||||||||| | |||||||||||||||||||| |||||||| ||||||||||||| ||||| ||||     
T  27721431 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtgaatttaa 27721530  T
Q  195 tttcggtggattaccacttc 214  Q
    |||| |||||||||||||||    
T  27721531 tttcagtggattaccacttc 27721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 29265874 - 29266001
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||  ||||||   ||||| ||||||| ||||| || | || ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  29265874 agtctagaagtcctaactcaactagaaaatgtcgaaattacaaggtcgaatgttgtgacccggattcgaacccgggacctcacagttgtgtgtgagttta 29265973  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  29265974 ttttcagtggattaccacttcatctaag 29266001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 6020995 - 6021117
Alignment:
Q  99 tagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    |||||||||||  |||| || |||||| | ||||||||||||| ||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  6020995 tagaagtcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtttatttt 6021094  T
Q  198 cggtggattaccacttcatctaa 220  Q
    | |||||||||||||| ||||||    
T  6021095 cagtggattaccactttatctaa 6021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 21112049 - 21112175
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||| |  |||||||||||  |||||||||| || |||||| |||||||| |||||||||    
T  21112049 gtctagaagtcctagctcagctgacaaatgtcgaaattgcaaggacatacgtcgtgacctaggttcgaacctgggacctcaaagttgtgtttgagtttat 21112148  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||||||||||| |||||||||    
T  21112149 tttcagtggattaccacatcatctaag 21112175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 17984869 - 17984745
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||| |||||||| ||| | ||||||||||||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |    
T  17984869 tctagaagtcctagctcaactgaaaaaggtcgaaattgcaagattggacgtcctgactcgggttcgaacccggaacctcacagttgtgtgtgagtttaat 17984770  T
Q  196 ttcggtggattaccacttcatctaa 220  Q
    ||  |||| ||| ||||||||||||    
T  17984769 tttagtggcttatcacttcatctaa 17984745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 9577089 - 9576986
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||| ||||||||||     
T  9577089 gtctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagtttaa 9576990  T
Q  195 tttc 198  Q
    ||||    
T  9576989 tttc 9576986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 3387028 - 3386895
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaaccc-------ggaacctcacagttgtgtgtg 187  Q
    ||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||| | ||||||||||||||       ||||||||| |||||||||||    
T  3387028 gtctaaaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgttatccgggttcgaacccggaagtcggaacctcaaagttgtgtgtg 3386929  T
Q  188 agtttattttcggtggattaccacttcatctaag 221  Q
    | |||| |||| ||||||||||||||| ||||||    
T  3386928 aatttaatttcagtggattaccacttcttctaag 3386895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 11124652 - 11124778
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||  | ||||||||| |||||||| | || | |||| |||||     
T  11124652 gtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaacccagaacctcataattttatgtgggtttaa 11124751  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||  ||||||||||||||||||||||    
T  11124752 tttgagtggattaccacttcatctaag 11124778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 32143531 - 32143416
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||            ||||||||||||||||||||||||    
T  32143531 agtctagaagtcatagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccggg------------acctcacagttgtgtgtgagttta 32143444  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  32143443 ttttcagtggattaccacttcatctaag 32143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 99 - 218
Target Start/End: Complemental strand, 28591475 - 28591355
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    |||||||||||  | ||||| ||||| | |||||||||||||||||||| ||||| ||||||| |||| | |||||||||||||||| |||||||| | |    
T  28591475 tagaagtcctaactaaactggcaaatactgaaattgcaaggccggacgtagtgactcgggttcaaacctgaaacctcacagttgtgtatgagtttaatgt 28591376  T
Q  198 cggtggattaccacttcatct 218  Q
    | |||| ||||||||||||||    
T  28591375 cagtggtttaccacttcatct 28591355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 23262579 - 23262670
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||| ||| || |||||    |||||||||  |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23262579 cgaaattgcaaggctggatgttgtgac----gttcgaacctagaaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 23262670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 35545933 - 35546059
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||  ||||||||||||||| ||||||||||  ||| ||||||||| |||  |||||||| || ||||||||||||| |||| |||||     
T  35545933 gtctagaagttctaactcaactgacaaatgccgaaattgcaaaaccgaacgtcgtgatccgaattcgaacctgggacctcacagttgtatgtgggtttaa 35546032  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||  |||||||| |||||||||||||    
T  35546033 tttaagtggattatcacttcatctaag 35546059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 2786271 - 2786396
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  |||| || ||||||| ||||||| |||| |||||| ||||| |||  ||| |||| || ||||||||||||||| ||||||||     
T  2786271 gtctagaagtcctaattcaattggcaaatgccgaaattgtaaggtcggacgccgtgatccgaattcaaacctgggacctcacagttgtgtatgagttta- 2786369  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
     ||| ||||||||||||||||||||||    
T  2786370 attcagtggattaccacttcatctaag 2786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 14270535 - 14270650
Alignment:
Q  107 ctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggat 205  Q
    |||| ||||||||||||||| ||||||| ||   ||||||||||||||||  ||| ||||||  | |||| |||||||| | ||||||||||| ||||||    
T  14270535 ctagctcaactgacaaatgccgaaattgaaaaatcggacgtcgtgacccgtattccaacccgagatctcatagttgtgtttaagtttattttcagtggat 14270634  T
Q  206 taccacttcatctaag 221  Q
    || |||||||||||||    
T  14270635 tatcacttcatctaag 14270650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 3049173 - 3049094
Alignment:
Q  105 tcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtg 183  Q
    |||||| |||||| |||||||| ||| ||||||||||||||| |||||||||  ||| ||||||| ||||||||||||||    
T  3049173 tcctagttcaactcacaaatgccaaaattgcaaggccggacgccgtgacccgatttcaaacccgggacctcacagttgtg 3049094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 30127894 - 30127960
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcg 161  Q
    ||||||||||||||| ||||||   |||||| |||||||||||||||||| ||||||||||||||||    
T  30127894 gtctagaagtcctagctcaacttgtaaatgccgaaattgcaaggccggacatcgtgacccgggttcg 30127960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 41580142 - 41580078
Alignment:
Q  156 ggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaa 220  Q
    |||||||| ||| ||||||||||||||||||  ||||| |||   ||||||||||||||||||||    
T  41580142 ggttcgaatccgaaacctcacagttgtgtgtaggtttaattttaatggattaccacttcatctaa 41580078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 19181784 - 19181836
Alignment:
Q  168 gaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||| |||| |||||||| |||||||| ||||    
T  19181784 gaacatcacagttgtgtgtgagtttaatttcagtggatta-cacttcatttaag 19181836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 6e-51; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 34739272 - 34739406
Alignment:
Q  88 aagaaagagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgt 186  Q
    |||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  34739272 aagaaaaagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgt 34739371  T
Q  187 gagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||| ||||||||||||||||||||||    
T  34739372 gagtttattttcagtggattaccacttcatctaag 34739406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 28798516 - 28798390
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28798516 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttat 28798417  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  28798416 tttcagtggattaccacttcatctaag 28798390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 45874055 - 45874181
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 45874154  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  45874155 tttcagtggattaccacttcatctaag 45874181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 1173951 - 1174077
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  1173951 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 1174050  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  1174051 tttcagtggattaccacttcatctaag 1174077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 43140034 - 43139908
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 43139935  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  43139934 tttcagtggattaccacttcatctaag 43139908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 26424988 - 26424860
Alignment:
Q  93 agagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtt 191  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26424988 agagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggc-ggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 26424890  T
Q  192 tattttcggtggattaccacttcatctaag 221  Q
    ||||||| ||||||||||||||||||||||    
T  26424889 tattttcagtggattaccacttcatctaag 26424860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 19849633 - 19849505
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  19849633 gagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagttt 19849534  T
Q  193 attttcggtggattaccacttcatctaag 221  Q
    ||||||  ||| |||||||||||||||||    
T  19849533 attttcaatggtttaccacttcatctaag 19849505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 53457824 - 53457950
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  53457824 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttat 53457923  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  53457924 tttcagtggattaccacttcatctaag 53457950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 18257329 - 18257455
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||| ||||||||||    
T  18257329 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtttat 18257428  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  18257429 tttcagtggattaccacttcatctaag 18257455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 54768560 - 54768434
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||| |    
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagttttt 54768461  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  54768460 tttcagtggattaccacttcatctaag 54768434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 55214651 - 55214778
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||| ||  ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  55214651 agtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagttta 55214750  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| |||||||||||||| |||||||    
T  55214751 ttttcagtggattaccactttatctaag 55214778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 238586 - 238464
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||| | ||||| |||||||||||||| |||||||||||||||||||||||||    
T  238586 gtctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 238487  T
Q  195 tttcggtggattaccacttcatc 217  Q
    |||| ||||||||||||||||||    
T  238486 tttcagtggattaccacttcatc 238464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 12735431 - 12735557
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||||||||||| ||| ||| |||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  12735431 gtctagaagtactagctcaactgacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttat 12735530  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  12735531 tttcagtggattaccacttcatctaag 12735557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 22607983 - 22608108
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    |||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  22607983 gagtttagaagtcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagttt 22608082  T
Q  193 attttcggtggattaccacttcatct 218  Q
    | ||||  |||||||| |||||||||    
T  22608083 aatttcaatggattactacttcatct 22608108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 12867841 - 12867967
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||| || | |||||||||||| ||||||||||    
T  12867841 gtctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtttat 12867940  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  12867941 tttcagtggattaccacttcatctaag 12867967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 23417603 - 23417485
Alignment:
Q  104 gtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtg 202  Q
    ||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||| |||    
T  23417603 gtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtg 23417504  T
Q  203 gattaccacttcatctaag 221  Q
    |||||||||||||||||||    
T  23417503 gattaccacttcatctaag 23417485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 23710461 - 23710337
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| |||||||  ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||     
T  23710461 gtctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtttaa 23710362  T
Q  195 tttcggtggattaccacttcatcta 219  Q
    |||| ||||||||||||||||||||    
T  23710361 tttcagtggattaccacttcatcta 23710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 55400227 - 55400354
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||| |||||  |||||||  |||||| ||||||||||||||||||||| ||| |||| ||||||| |||||||||| |||||| ||||||||||    
T  55400227 agtctagaaatcctaactcaactggtaaatgccgaaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgagttta 55400326  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  55400327 ttttcagtggattaccacttcatctaag 55400354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 19225261 - 19225385
Alignment:
Q  98 ctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattt 196  Q
    ||||||||||||| ||||||| ||||||| ||||||| || |||||||||| ||| |||||||||||||||| |||||||| ||||| ||||||||| ||    
T  19225261 ctagaagtcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtttagtt 19225360  T
Q  197 tcggtggattaccacttcatctaag 221  Q
    || |||| |||||||||||||||||    
T  19225361 tcagtggtttaccacttcatctaag 19225385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 29581185 - 29581046
Alignment:
Q  82 aacaaaaagaaagagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagtt 180  Q
    ||||||||| ||  ||| ||||||||||| |||| || || |||| |||||||||||||||||||||||||||  ||||||||||||  |||||||||||    
T  29581185 aacaaaaagtaattgtcaagaagtcctagctcaattgtcagatgccgaaattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagtt 29581086  T
Q  181 gtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  29581085 gtgtgtgagtttaattt-agtggattaccacttcatctaag 29581046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 11277982 - 11278104
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||| || |||||||||||| ||||||| ||||||||||    ||||||||||     
T  11277982 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagt----tgtgagtttaa 11278077  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  11278078 tttcagtggtttaccacttcatctaag 11278104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 37134048 - 37134166
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||| |||| ||| ||| ||||||||||||||| ||| |||||||||||||||||||||     
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagtttaa 37134147  T
Q  195 tttcggtggattaccactt 213  Q
    |||| |||| |||||||||    
T  37134148 tttcagtggtttaccactt 37134166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 2864876 - 2864751
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcg-aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||| |||||||  |||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||| |||     
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgagcttaa 2864777  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    ||||   || ||||||||||||||||    
T  2864776 tttcaaaggtttaccacttcatctaa 2864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 19814108 - 19814229
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    |||||||| ||| ||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||| || |||||||| || |||||||||||| |||    
T  19814108 tagaagtcttagctcaactggcaaatgcagaaattgtaaggccggacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgagtttaattt 19814207  T
Q  198 cggtggattaccacttcatcta 219  Q
    | || |||||||||||||||||    
T  19814208 cagttgattaccacttcatcta 19814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 39807875 - 39807963
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttc 214  Q
    ||||||||||||||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  39807875 cgaaattgcaaggccagacatcgtgacccgagttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttc 39807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 32441214 - 32441119
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtga 188  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||| || |||||||||||||||||||| |||||||||||||| ||||    
T  32441214 gagtctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgtgcgtga 32441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 19674057 - 19673931
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| |||||||  |||||  ||||||||||||||| |||| |||||| |||||||||||||| |||||||| || |||| |||||||     
T  19674057 gtctagaagtcttagctcaactggtaaatgtagaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgagtttaa 19673958  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||| ||||    
T  19673957 tttcagtggattaccacttcatttaag 19673931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 12767087 - 12767213
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||  |||||| ||||||| |||  |||||||| ||| | ||||||||| ||| |||||||||||||||||||||||||     
T  12767087 gtctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagtttaa 12767186  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    ||||  ||| ||||  |||||||||||    
T  12767187 tttcactggtttactgcttcatctaag 12767213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 49030835 - 49030754
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattac 208  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||  ||| |||||||||    
T  49030835 cgaaattgcaaggccggacgtcgtgatccgagttcgaa-ccggaacctcatagttgtgtgtgagtttaacttcagtggattac 49030754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 22910386 - 22910269
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||||   | |||||||||||| | ||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||| | ||||||    
T  22910386 agtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagttta 22910287  T
Q  194 ttttcggtggattaccac 211  Q
     ||||  | |||||||||    
T  22910286 atttcaatagattaccac 22910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 22968136 - 22968253
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||||   | |||||||||||| | ||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||| | ||||||    
T  22968136 agtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagttta 22968235  T
Q  194 ttttcggtggattaccac 211  Q
     ||||  | |||||||||    
T  22968236 atttcaatagattaccac 22968253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 32778125 - 32778238
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||| || ||||||||||||||||| | ||| |||||||| |||||||||||| |||||||||||| ||  |||||||| |  |||||||||||||    
T  32778125 gtctagaaatcatagatcaactgacaaataccaaaattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaat--tgtgtgagtttat 32778222  T
Q  195 tttcggtggattacca 210  Q
    |||  |||||||||||    
T  32778223 ttttagtggattacca 32778238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 24417974 - 24417887
Alignment:
Q  127 gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttc 214  Q
    |||||||||||||  |||||||||||||||||||||| |||  ||||||||||||||  |||||||| |||  |||||||||||||||    
T  24417974 gaaattgcaaggcacgacgtcgtgacccgggttcgaatccgagacctcacagttgtggatgagtttaattttagtggattaccacttc 24417887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 516551 - 516458
Alignment:
Q  128 aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||  |||||| ||||| || ||| |||||| | | |||||| ||||||||||||||||||||||||||||||  |||||||||||    
T  516551 aaattgcaaggttggacgttgtgactcgagtttgaacccaggatctcacaattgtgtgtgagtttattttcggtggattacagcttcatctaag 516458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 52172085 - 52172000
Alignment:
Q  128 aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccactt 213  Q
    |||||| |||||| ||||||||||  |||||| |||||  |||||||||| ||||||||||||||| |||| ||||||||||||||    
T  52172085 aaattgtaaggccagacgtcgtgattcgggtttgaacctagaacctcacaattgtgtgtgagtttaatttcagtggattaccactt 52172000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 51287600 - 51287728
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-ttt 192  Q
    ||||||||||||  || ||| ||||||||||| ||| ||| |||| | |||||||||| | |||||  |||||| ||||||||||||||||||||| |||    
T  51287600 agtctagaagtcacagctcagctgacaaatgccaaaattgtaaggtcagacgtcgtgatctgggtttaaacccgaaacctcacagttgtgtgtgagtttt 51287699  T
Q  193 attttcggtggattaccacttcatctaag 221  Q
    | |||| ||| ||||||| ||||||||||    
T  51287700 aatttcagtgaattaccatttcatctaag 51287728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 31015014 - 31015108
Alignment:
Q  127 gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||| |||| ||||| || |||  ||||||||||  | |||||||||||||||||||||||||| |||| |||  |||||||||||||||||    
T  31015014 gaaattgtaaggtcggacatcatgattcgggttcgaattcagaacctcacagttgtgtgtgagtttaatttcagtgctttaccacttcatctaag 31015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 1966611 - 1966676
Alignment:
Q  156 ggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||  ||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaag 1966676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 2075509 - 2075608
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgcgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||| |||||  ||||||| |||||   ||||||||||| |||||||| |||   |||||||||||||| ||||||||||| |||||||||||| ||||    
T  2075509 tagaaatcctacctcaactgccaaatatcaaattgcaagggcggacgtcatgatttgggttcgaacccgggacctcacagttatgtgtgagtttaatttc 2075608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 3465755 - 3465842
Alignment:
Q  99 tagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtg 185  Q
    |||||||||||| ||||||  |||||  ||||||||||||||||||||| |||| || ||||||||| ||| |||||| |||||||||    
T  3465755 tagaagtcctagctcaactagcaaatatcgaaattgcaaggccggacgttgtgatccaggttcgaactcgggacctcatagttgtgtg 3465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 24518091 - 24517988
Alignment:
Q  116 ctgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttc 214  Q
    ||||||||||| ||||||| ||| |||||||| |||||||| ||||||||||| || |||||| || |||||||||||| |||   || ||||||||||     
T  24518091 ctgacaaatgctgaaattgtaagaccggacgttgtgacccgtgttcgaacccgaaatctcacaattatgtgtgagtttaattttaatgaattaccactta 24517992  T
Q  215 atct 218  Q
    ||||    
T  24517991 atct 24517988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 33770628 - 33770694
Alignment:
Q  155 gggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||| || ||| ||||||||||||||||| |||| |||| ||||| |||||||||||    
T  33770628 gggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatctaag 33770694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 41679375 - 41679492
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||| |||| |||| ||||||||||||||| |||||| ||||| ||||||||||||| || |||| || |   ||| |||||||||||||||||| || |    
T  41679375 tctaaaagttctagctcaactgacaaatgctgaaattacaaggtcggacgtcgtgactcgagttcaaatctacaacttcacagttgtgtgtgagtgtaat 41679474  T
Q  196 ttcggtggattaccactt 213  Q
    ||| |||  |||||||||    
T  41679475 ttcagtgacttaccactt 41679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 16887676 - 16887581
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||| ||  ||||||||||||||| |||||| ||| |||||||||||||| | |||||| ||| ||  || |||||||| ||||||||||||    
T  16887676 tagaagtcttaactcaactgacaaatgcagaaattacaaagccggacgtcgtgatctgggttcaaactcgagacttcacagttatgtgtgagttta 16887581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 50033397 - 50033508
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggcc-ggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacc 209  Q
    ||||||| ||||||| |||||||||| | | |||||| |||||||||||||||||  |  || |||||||||||||| |||||| ||||  || ||||||    
T  50033397 tcaactgtcaaatgccgaaattgcaaagactggacgttgtgacccgggttcgaacatgagacatcacagttgtgtgtaagtttaatttcaatgaattacc 50033496  T
Q  210 acttcatctaag 221  Q
    ||||||| ||||    
T  50033497 acttcatataag 50033508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 52768425 - 52768303
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    ||||||| |||| | | ||| ||||||| |||| ||||||| ||||||||||||  ||  ||||||||  | | |||||||||||||||||||||| |||    
T  52768425 tagaagtgctagcttatctggcaaatgctgaaactgcaaggtcggacgtcgtgattcgaattcgaaccaaggatctcacagttgtgtgtgagtttaattt 52768326  T
Q  198 cggtggattaccacttcatctaag 221  Q
    |  |||||||||| ||||||||||    
T  52768325 caatggattacca-ttcatctaag 52768303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 2804539 - 2804646
Alignment:
Q  113 caactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccac 211  Q
    |||||||||||||| ||| ||| |||| ||||||| ||||||||||||||||||  | ||||   |||| | |||||||||| |||  ||||||||||||    
T  2804539 caactgacaaatgctaaaattgtaaggtcggacgttgtgacccgggttcgaacctaggacct--tagttttatgtgagtttaatttaagtggattaccac 2804636  T
Q  212 ttcatctaag 221  Q
    ||||| ||||    
T  2804637 ttcatttaag 2804646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 37620677 - 37620739
Alignment:
Q  155 gggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatc 217  Q
    |||||||||||||| |  |||||| | |||||||||||| |||| ||||||||||||||||||    
T  37620677 gggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatc 37620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 52016080 - 52016128
Alignment:
Q  173 tcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||| || |||||||||||||| |||||||||||||||| ||||    
T  52016080 tcacagttgggtatgagtttattttcgatggattaccacttcatttaag 52016128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 23532125 - 23532172
Alignment:
Q  173 tcacagttgtgtgtgagtttattttcggtggattaccacttcatctaa 220  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| |||||    
T  23532125 tcacagttgtgtgtgagtttaatttcagtgaattaccacttcttctaa 23532172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 48822881 - 48822939
Alignment:
Q  163 acccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||| ||| |||||||||||||||||||||| ||||  | |||||||||||||| ||||    
T  48822881 acccagaatctcacagttgtgtgtgagtttaatttcaatagattaccacttcatttaag 48822939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 50347377 - 50347331
Alignment:
Q  175 acagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||| |||||||||||||| |||| |||||||||||| |||||||||    
T  50347377 acagatgtgtgtgagtttaatttcagtggattaccacctcatctaag 50347331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 46343333 - 46343400
Alignment:
Q  102 aagtcctagatcaactgacaaatg---cgaaattgcaaggccggacgtcgtgacccgggttcgaaccc 166  Q
    ||||||||| |||||||||||| |   ||||||||  |||||||||||| ||||| ||||||||||||    
T  46343333 aagtcctagctcaactgacaaaagtgccgaaattgttaggccggacgtcatgaccggggttcgaaccc 46343400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 16555381 - 16555433
Alignment:
Q  169 aacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||| |||| |||   || ||||||||||||||||||    
T  16555381 aacctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaag 16555433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 6e-51; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 34460369 - 34460495
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34460369 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtttat 34460468  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  34460469 tttcagtggattaccacttcatctaag 34460495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 10639734 - 10639608
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  10639734 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 10639635  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  10639634 tttcagtggattaccacttcatctaag 10639608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 33083682 - 33083556
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33083583  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  33083582 tttcagtggattaccacttcatctaag 33083556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 19537307 - 19537433
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  19537307 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgtttat 19537406  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  19537407 tttcagtggattaccacttcatctaag 19537433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 26605624 - 26605750
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgaatttat 26605723  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  26605724 tttcagtggattaccacttcatctaag 26605750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 11459715 - 11459841
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  11459715 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgtgtttat 11459814  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    ||||  |||||||||||||||||||||    
T  11459815 tttcaatggattaccacttcatctaag 11459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 37197722 - 37197612
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  37197722 tcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacca 37197623  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  37197622 cttcatctaag 37197612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 45125293 - 45125167
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||    
T  45125293 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagtttat 45125194  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  45125193 tttcagtggattaccacttcatctaag 45125167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 11708678 - 11708803
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  11708678 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgggtttat 11708777  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||| |||||||||||||||||||||    
T  11708778 tttcagtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 23839858 - 23839985
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||  ||||||| ||||||| ||| |||||||||||||||| |||||| ||||||||||| || ||||||||||||||||||||||||    
T  23839858 agtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagttta 23839957  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  23839958 ttttcagtggattaccacttcatctaag 23839985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 11816675 - 11816552
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-tttatttt 197  Q
    ||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |||| |||    
T  11816675 agaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 11816576  T
Q  198 cggtggattaccacttcatctaag 221  Q
    | ||||||||||||||||||||||    
T  11816575 cagtggattaccacttcatctaag 11816552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 19048753 - 19048880
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  19048753 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagttta 19048852  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  19048853 gtttcagtggtttaccacttcatctaag 19048880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 19816220 - 19816346
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||| | |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||| |||||||||    
T  19816220 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagtttat 19816319  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| || |||||| ||||||||||||    
T  19816320 tttcagtagattacaacttcatctaag 19816346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 29659346 - 29659220
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||| ||| ||||||| || | |||||||||||||||||||   |||||||||||||||||||||||||    
T  29659346 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccgaacattgtgacccgggttcgaacccatgacctcacagttgtgtgtgagtttat 29659247  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  29659246 tttcagtggattaccacttcatctaag 29659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 39535662 - 39535536
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||     
T  39535662 gtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagtttaa 39535563  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||  | ||||||||||||||||||||    
T  39535562 tttgagcggattaccacttcatctaag 39535536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 16654366 - 16654488
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    |||||||||||  |||||||| |||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  16654366 tagaagtcctaactcaactgataaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagtttatttt 16654465  T
Q  198 cggtggattaccacttcatctaa 220  Q
      ||| ||| || ||||||||||    
T  16654466 tagtgaattgccccttcatctaa 16654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 27138045 - 27137920
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||| || |||||||| |||||||||||||| |||| |||||| | ||||||||||     
T  27138045 gtctagaagtcctagctcaactgacaaatgctgaaattg-aaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagtttaa 27137947  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  27137946 tttcagtggattaccacttcatctaag 27137920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 39831572 - 39831446
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||| ||||||||| ||||||| ||||| | ||||||||||||||||||||| ||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  39831572 agtctataagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaaccggga-cctcacaattgtgtgtgagttta 39831474  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  39831473 atttcagtggtttaccacttcatctaag 39831446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 4851320 - 4851442
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||| |||||||||| ||||||| ||| ||| ||||||| || |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||     
T  4851320 gtcttgaagtcctagctcaactgtcaattgccgaaattgtaaagccggacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtttaa 4851419  T
Q  195 tttcggtggattaccacttcatc 217  Q
    |||  ||||||||||||||||||    
T  4851420 ttttagtggattaccacttcatc 4851442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 7276015 - 7275888
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaa-tgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||||||  |||||||||||| ||| |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||| | ||||    
T  7276015 gtctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtggcccgggttcgaacccgggacctcacagttgtgtgtaaattta 7275916  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||   |||||||||||||||||||||    
T  7275915 attttaatggattaccacttcatctaag 7275888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 42025674 - 42025797
Alignment:
Q  100 agaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagt-ttatttt 197  Q
    ||||||||||| |||||||||||||| |||||||  ||||||||| ||||||||| | |||||||||| |||||||||| |||||||||||| ||| |||    
T  42025674 agaagtcctagctcaactgacaaatgtcgaaattttaaggccggatgtcgtgacctgagttcgaacccagaacctcacaattgtgtgtgagtcttaattt 42025773  T
Q  198 cggtggattaccacttcatctaag 221  Q
    | ||||| ||||||||||||||||    
T  42025774 cagtggactaccacttcatctaag 42025797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 43684073 - 43684194
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||| ||| |||| || |||||||||||||||||    
T  43684073 agaagtcctatctcaactgacaaatgccgaaattgcaaggccggacaccatgacatgggttcgaacccgggaccccacaattatgtgtgagtttattttc 43684172  T
Q  199 ggtggattaccacttcatctaa 220  Q
      ||||||||||||||||||||    
T  43684173 actggattaccacttcatctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 4800879 - 4801001
Alignment:
Q  99 tagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    ||||||| |||| ||||| | |||||| |||||||||||||| ||||||||||||| | |||||||||||||||||| | ||| |||||||||||| ||     
T  4800879 tagaagttctagctcaaccggcaaatgtcgaaattgcaaggctggacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattc 4800978  T
Q  198 cggtggattaccacttcatctaa 220  Q
    | ||| |||||||||||||||||    
T  4800979 cagtgaattaccacttcatctaa 4801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 15782590 - 15782715
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||| ||||||||| |||| |||||||||| ||||||| |||| |||||||| |||||||||||||||||||  |||| |||| |||||| |||||||     
T  15782590 gtctaaaagtcctagctcaattgacaaatgccgaaattgtaaggtcggacgtcatgacccgggttcgaacccgagaccttacag-tgtgtgggagtttaa 15782688  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  15782689 tttcagtggtttaccacttcatctaag 15782715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 38440322 - 38440199
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    ||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |  |||||  || | |||||||||||| |||    
T  38440322 tagaagttccagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccggatccgaacctgagacctcctagctatgtgtgagtttaattt 38440223  T
Q  198 cggtggattaccacttcatctaag 221  Q
      ||||||||||||||||||||||    
T  38440222 tagtggattaccacttcatctaag 38440199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 40786338 - 40786212
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    ||||| |||||| |||||||||||    
T  40786338 agtctagaagtcataactcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctcgcagttgagtgtgagttta 40786239  T
Q  194 ttttcggtggattaccacttcatctaa 220  Q
     |||  ||| |||| |||||| |||||    
T  40786238 attttagtgaattatcacttcttctaa 40786212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 43778580 - 43778470
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||||||||| | |||||||||| |||| | ||||||||| |||||||||||    || ||||||||||||||||||||||||||  ||||||||||    
T  43778580 tcaactgacaaataccgaaattgcaaagccgaatgtcgtgacctgggttcgaacctaagacttcacagttgtgtgtgagtttattttcattggattacca 43778481  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  43778480 cttcatctaag 43778470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 42578180 - 42578294
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| ||||||||             |||||||||||||||||||||||||    
T  42578180 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccggt------------acctcacagttgtgtgtgagtttat 42578267  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  42578268 tttcagtggattaccacttcatctaag 42578294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 25501907 - 25501832
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctc 174  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  25501907 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctc 25501832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 7349097 - 7349223
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||||| |  ||||||| ||||||| || |||||||||||||||||||||| ||| ||||||| |||  ||||||||  | ||||||||||||    
T  7349097 agtctagaagtccaatctcaactggcaaatgctgatattgcaaggccggacgtcgtgatccgagttcgaatccgagacctcacaactatgtgtgagttta 7349196  T
Q  194 ttttcggtggattaccacttcatctaa 220  Q
     |||  |||||| ||||||||||||||    
T  7349197 attttagtggatcaccacttcatctaa 7349223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 45202001 - 45201903
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    |||||||||||||||  |||| || |||||| |||||||| |||| ||| |||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  45202001 agtctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtgatccgagttcgaactcggaacctcacagttgtgtgtgagttt 45201903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 34234530 - 34234654
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| |||| || |||| | | ||| |||||||  |||||| |||||||  ||||||||     
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggatgttgtgatctgagtttgaacccgagacctcatagttgtg--tgagtttaa 34234627  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| || ||| |||||||||||||||    
T  34234628 tttcagtagatcaccacttcatctaag 34234654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 20497670 - 20497590
Alignment:
Q  143 acgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaaggc 223  Q
    |||||||||  | ||||| |||||||||||||||| |||| |||||||||  |||| |||| |||||||||||||||||||    
T  20497670 acgtcgtgattcaggttcaaacccggaacctcacaattgtatgtgagttttatttcagtggtttaccacttcatctaaggc 20497590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 44181997 - 44181889
Alignment:
Q  114 aactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccact 212  Q
    ||||||||||||| ||||||| |||| || | || ||||   || |||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||    
T  44181997 aactgacaaatgctgaaattgtaaggtcgaatgttgtgatttggattcgaatccgggatctcacagttgtgtgtgagtttattttcagtggattatcact 44181898  T
Q  213 tcatctaag 221  Q
    | |||||||    
T  44181897 taatctaag 44181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 8742726 - 8742600
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||||||| || |||||||  |||| | |||||||||   || ||| ||  || ||||| ||| |||| |||||| ||||    
T  8742726 gtctagaagtcctagctcaactgacaaaggccgaaattgttaggctgaacgtcgtgatttggattcaaattcgaaaccttacaattgtatgtgagattat 8742627  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    ||| ||||||||||||| |||||||||    
T  8742626 ttttggtggattaccacatcatctaag 8742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 34239947 - 34239822
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||  || |||  ||||||| ||||||| |||| | ||||||||||| || |||||||| | |||||| |||||||||| |||||||| |    
T  34239947 tctagaagtcctaactctactagcaaatgccgaaattgtaaggtcagacgtcgtgactcgagttcgaactcagaaccttacagttgtgtatgagtttaat 34239848  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    |||  |  ||||||||||||| ||||    
T  34239847 ttcaataaattaccacttcatttaag 34239822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 38400486 - 38400567
Alignment:
Q  113 caactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||| |||||| |||||||||||  |||||||||||||| ||||||||| || | |||||| ||||||||| |||||||    
T  38400486 caactgataaatgccgaaattgcaagatcggacgtcgtgaccagggttcgaatccaggacctcatagttgtgtgcgagttta 38400567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 40825240 - 40825161
Alignment:
Q  141 ggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaa 220  Q
    ||||||| ||||||||||||||| |||  | ||  ||| |||||||||||||||||||  ||||||| ||||||||||||    
T  40825240 ggacgtcatgacccgggttcgaatccgagatcttccaggtgtgtgtgagtttattttcaatggattatcacttcatctaa 40825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 21312238 - 21312329
Alignment:
Q  128 aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||| ||| |||||||| |||| | ||| ||||||| || |||||||| |||||  ||||||||||||  ||| ||||||||||||||||||    
T  21312238 aaattgtaagaccggacgttgtgatctgggatcgaacctgggacctcacaattgtg--tgagtttatttttagtgaattaccacttcatctaag 21312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 33001762 - 33001828
Alignment:
Q  155 gggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||| | | ||||||||||| | |||||||||| |||| ||||||||||| ||||||||||    
T  33001762 gggttcgaacacaggacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaag 33001828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 6055131 - 6055006
Alignment:
Q  98 ctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattt 196  Q
    ||||| ||||||| |||| |||||||||| ||| |||||||| || ||||||| |  ||| ||||||| | | |||||| || |||||||||||||| ||    
T  6055131 ctagatgtcctagctcaattgacaaatgccaaaattgcaaggtcgaacgtcgtaattcggattcgaactcaggacctcatagctgtgtgtgagtttaatt 6055032  T
Q  197 tcggtggattacc-acttcatctaag 221  Q
    |  |||||||||| |||| |||||||    
T  6055031 ttagtggattacctactttatctaag 6055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 12366781 - 12366826
Alignment:
Q  148 gtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||    
T  12366781 gtgatccggattcaaacccggaacctcacagttgtgtgtgagttta 12366826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 15072124 - 15072204
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggatta 207  Q
    ||||||||||| || ||| ||||||| |||| ||||||||||| |||||| | ||||||||| ||||| |||| ||||||||    
T  15072124 cgaaattgcaaagctggatgtcgtgatccggattcgaacccgggacctcata-ttgtgtgtgtgtttaatttcagtggatta 15072204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 29726072 - 29726112
Alignment:
Q  152 cccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  29726072 cccgggttcgaacccgggacctcgcagttgtgtctgagttt 29726112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 6e-51; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 41808202 - 41808328
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 41808301  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  41808302 tttcagtggattaccacttcatctaag 41808328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 32007072 - 32007200
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  32007072 gagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 32007171  T
Q  193 attttcggtggattaccacttcatctaag 221  Q
    |||||| ||||||||||||||||||||||    
T  32007172 attttcagtggattaccacttcatctaag 32007200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 28455873 - 28456000
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  28455873 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 28455972  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  28455973 ttttcagtggattaccacttcatctaag 28456000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 45813139 - 45813013
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45813139 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 45813040  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  45813039 tttcagtggattaccacttcatctaag 45813013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 5055917 - 5055790
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  5055917 agtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 5055818  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  5055817 ttttcagtggattaccacttcatctaag 5055790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 41761539 - 41761417
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  41761539 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttat 41761440  T
Q  195 tttcggtggattaccacttcatc 217  Q
    |||| ||||||||||||||||||    
T  41761439 tttcagtggattaccacttcatc 41761417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 48660022 - 48660148
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| | |||||||||||||||||||||||    
T  48660022 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttat 48660121  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  48660122 tttcagtggattaccacttcatctaag 48660148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 20746 - 20874
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    ||||||||||||||||  ||||||| ||||||| ||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  20746 gagtctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagttt 20845  T
Q  193 attttcggtggattaccacttcatctaag 221  Q
    |||||  ||||||||||||||||||||||    
T  20846 atttttagtggattaccacttcatctaag 20874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 192414 - 192541
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||| ||| |||||||||| | ||||||||||||||||||||||||    
T  192414 agtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagttta 192513  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| | ||||||||||||||||||||    
T  192514 ttttcagcggattaccacttcatctaag 192541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 39276357 - 39276476
Alignment:
Q  103 agtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggt 201  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||    
T  39276357 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagt 39276456  T
Q  202 ggattaccacttcatctaag 221  Q
    ||||||||||||||| ||||    
T  39276457 ggattaccacttcatttaag 39276476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 35945798 - 35945923
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||| |||||||  |||||| ||||||| ||||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  35945798 tctagaagtcctagctcaactggtaaatgccgaaattgtaaggctggacgttgtgacctgggttcgaacccggaacctcacagttgtgtgtgaatttatt 35945897  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    ||| ||||||||||||||||||||||    
T  35945898 ttcagtggattaccacttcatctaag 35945923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 5943682 - 5943807
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| |||||||||| |    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtttaat 5943781  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    |||  ||||||| |||||||||||||    
T  5943782 ttcaatggattatcacttcatctaag 5943807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 29994512 - 29994385
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||| |||||| ||| |||||||||||||||  |||||||| |||||||||||||||    
T  29994512 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagttta 29994413  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  29994412 atttcagtggtttaccacttcatctaag 29994385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 26032798 - 26032927
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccgg---acgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtt 191  Q
    ||||||||||||||  ||||||||||||||| ||||||| |||| |||   ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26032798 gtctagaagtcctaattcaactgacaaatgccgaaattgtaaggtcggcggacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgagtt 26032897  T
Q  192 tattttcggtggattaccacttcatctaag 221  Q
    || |||| |||||||||| |||||||||||    
T  26032898 taatttcagtggattaccgcttcatctaag 26032927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 11688254 - 11688385
Alignment:
Q  87 aaagaaagagtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtg 185  Q
    ||||||| |||||||||||||||| |||||||||||||  |||||||||||| ||| |||| ||||||| ||||||||  | | || ||| |||||||||    
T  11688254 aaagaaaaagtctagaagtcctagctcaactgacaaatatcgaaattgcaagcccgaacgttgtgaccctggttcgaattcaggacttcagagttgtgtg 11688353  T
Q  186 tgagtttattttcggtggattaccacttcatc 217  Q
    ||||||||||||| ||||||||||||||||||    
T  11688354 tgagtttattttcagtggattaccacttcatc 11688385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 13109769 - 13109896
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcg-aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| | ||||||||||||   ||||||||||| |||||||||| |||||  ||||||||  ||||||||||||||||||||||||||    
T  13109769 agtctagaagttctagcttaactgacaaatgattaaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagttta 13109868  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| ||||||||||||||||||||||    
T  13109869 atttcagtggattaccacttcatctaag 13109896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 46447505 - 46447375
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagt---- 190  Q
    |||||||||| |||| ||||||| ||||||| |||||||||||||  |||||||| |||||||||||||||||| ||||||||||| |||||||||        
T  46447505 gtctagaagttctagttcaactggcaaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacagttatgtgtgagtttaa 46447406  T
Q  191 ttattttcggtggattaccacttcatctaag 221  Q
    |||||||| |||||||||||| |||||||||    
T  46447405 ttattttcagtggattaccacatcatctaag 46447375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 41039375 - 41039305
Alignment:
Q  151 acccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41039375 acccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 41039305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 29587255 - 29587344
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtg 187  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 50106289 - 50106200
Alignment:
Q  130 attgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatcta 219  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||||    
T  50106289 attgcaaggccgaacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattgccatttcatcta 50106200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 49783707 - 49783833
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||| ||||||||  |||| || |||||| ||||||||||||| || ||||| |||  ||||||||||||||||||||||||||||| ||||| ||||     
T  49783707 gtctataagtcctaactcaattggcaaatgtcgaaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtgaatttaa 49783806  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  49783807 tttcagtggtttaccacttcatctaag 49783833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 2089033 - 2088908
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| |||||  |||||||| |||| | ||| ||||||| ||||||||||| | |||||||||| |||| |||||||| |     
T  2089033 gtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgactcgggttcgaactcagaacctcacaattgtatgtgagttcaa 2088934  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||| |||||||||||||||||||||    
T  2088933 tttcagtggattaccacttcatctaa 2088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 7059500 - 7059593
Alignment:
Q  128 aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||| | |||||||||||||||||||||| | |  |||||||||||||||||||||||| |||  |||||||||||||| |||||||    
T  7059500 aaattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtttaatttaagtggattaccactttatctaag 7059593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 7275697 - 7275806
Alignment:
Q  112 tcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| |||||| |||||||| |||| |||||||  |||| ||| |||||||||||||| |||||||||||| |||||||| |||| |||| ||||||    
T  7275697 tcaactggcaaatgtcgaaattgtaaggtcggacgttatgactcggattcgaacccggaacttcacagttgtgtatgagtttaatttcagtggtttacca 7275796  T
Q  211 cttcatctaa 220  Q
    ||||||||||    
T  7275797 cttcatctaa 7275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 21938944 - 21939068
Alignment:
Q  98 ctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattt 196  Q
    ||||||||||||| |||||||  |||||| ||||||| ||||||||| ||| ||| |||| |||||| || | |||||||||||||||| ||||||| ||    
T  21938944 ctagaagtcctagctcaactggtaaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacagttgtgtgcgagtttaatt 21939043  T
Q  197 tcggtggattaccacttcatctaag 221  Q
    || | || |||||||||||||||||    
T  21939044 tcagcggtttaccacttcatctaag 21939068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 13097339 - 13097430
Alignment:
Q  130 attgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||| ||||||||||||||||| ||| ||||  ||||||||||||||| |||||||||| |||   |||||||||||||||||||||    
T  13097339 attgcaaggtcggacgtcgtgacccggattcaaacctagaacctcacagttgtatgtgagtttaattttattggattaccacttcatctaag 13097430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 35110180 - 35110101
Alignment:
Q  142 gacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||| |||||||||||||||||| | |||| ||||||||||||||||||| |||  | ||||||||||||||||||||    
T  35110180 gacgtcatgacccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaag 35110101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 778578 - 778700
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgcgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||||| |||| |||||||  ||||||  |||| ||||| || |||||||||| | ||||||||||  | |||| ||||||||||||||||||| ||||    
T  778578 tagaagttctagctcaactggaaaatgccgaattacaaggtcgaacgtcgtgactcaggttcgaacctaggacctgacagttgtgtgtgagtttaatttc 778677  T
Q  199 ggtggattaccacttcatctaag 221  Q
     ||| ||||||| ||||||||||    
T  778678 agtgaattaccaattcatctaag 778700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 4065961 - 4066087
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||| ||||| ||||||||||||| | ||||||||||| | | |||| |||| ||||||||||| | |  |||| ||| |||| ||||||||||     
T  4065961 gtctagaagacctagctcaactgacaaataccgaaattgcaagactgaacgttgtgatccgggttcgaatctgagaccttacaattgtatgtgagtttaa 4066060  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||| ||||||||||||||||||    
T  4066061 tttcagtgaattaccacttcatctaag 4066087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 35224356 - 35224430
Alignment:
Q  112 tcaactgacaaatgcgaaat-tgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtg 185  Q
    ||||||| |||||||||||  |||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  35224356 tcaactggcaaatgcgaaaaatgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtg 35224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 39284290 - 39284415
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| ||||||||| ||||  ||||||| |||| ||||||||||||  ||||||||||||    ||||||||||||| ||||||||||     
T  39284290 gtctagaagtcatagctcaactgacgaatgttgaaattgtaaggtcggacgtcgtgattcgggttcgaacctaagacctcacagttgtatgtgagtttaa 39284389  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||  ||||||||| | |||||||||    
T  39284390 tttttgtggattactatttcatctaa 39284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 25931277 - 25931162
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||  |||||||||||||||||        ||||| ||||| |||||||||||||||     
T  25931277 gtctagaaatcctaactcaactgacaaatgccgaaattgcaaggctagacgtcgtgacccgggt--------ggaacttcacaattgtgtgtgagtttaa 25931186  T
Q  195 tttcggtggattaccacttcatct 218  Q
    ||||  | ||||||||||||||||    
T  25931185 tttcaatagattaccacttcatct 25931162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 39111950 - 39112050
Alignment:
Q  112 tcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||  ||  ||| | ||| |||||| ||||||||||||||| |||| |||||||||||    
T  39111950 tcaactgacaaatgtcgaaattgcaaggccggatgtcgtgatccgtatttaaactcagaatctcacaattgtgtgtgagttta-tttcagtggattacca 39112048  T
Q  211 ct 212  Q
    ||    
T  39112049 ct 39112050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 13183271 - 13183179
Alignment:
Q  128 aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaa 220  Q
    ||||||||||| ||||| |||| | ||| ||| |||||  |||||| |||||||| |||||||||| |||| ||| |||||||||||||||||    
T  13183271 aaattgcaaggtcggacatcgtaatccgagtttgaacctagaaccttacagttgtatgtgagtttaatttcagtgaattaccacttcatctaa 13183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 3688365 - 3688239
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||| || |||||| ||||||||||||| | ||| ||||||||  |||||| |||||  || ||||||||||||||||  || ||| |||| ||||||    
T  3688365 agtctaaaaatcctagttcaactgacaaattccaaaattgcaaggaaggacgttgtgacttggattcgaacccggaaccttgcaattgcgtgtaagttta 3688266  T
Q  194 ttttcggtggattaccacttcatctaa 220  Q
    ||| | || | ||||||||||||||||    
T  3688265 tttccagtagtttaccacttcatctaa 3688239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 47111473 - 47111543
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttg 181  Q
    ||||||||||||||| |||||||||||| |||||||||||||| ||||| |||||| | ||||| ||||||    
T  47111473 tcaactgacaaatgccgaaattgcaaggtcggacgtcgtgacctgggtttgaacccaggacctcgcagttg 47111543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 38817326 - 38817229
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||| | ||| ||| |||||||||| ||| |||| ||| ||||||||||||| ||| |||||||||||  |||||||| |||||||||| ||||    
T  38817326 tctagaagacatagttcatctgacaaatgtcgatattgaaagaccggacgtcgtgatccgagttcgaacccgagacctcacaattgtgtgtgaattta 38817229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 26264618 - 26264538
Alignment:
Q  141 ggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||| || ||| | |||||||| | ||||||||||||||||||||||||| ||||  || |||| |||||||||||||    
T  26264618 ggacgtcatgtcccagattcgaacctgaaacctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaag 26264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 45294658 - 45294726
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaa 163  Q
    ||||||||||||||| ||||||  ||||||| ||||||||||| |||||| || |||||||||||||||    
T  45294658 gtctagaagtcctagctcaactagcaaatgccgaaattgcaagaccggacatcatgacccgggttcgaa 45294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 3716642 - 3716709
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||| ||| |||| ||  ||| | ||||||||||||||||||||||||||    
T  3716642 cgaaattgcaaggccgaacgtcatgatccggatttaaactcagaacctcacagttgtgtgtgagttta 3716709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 3716424 - 3716485
Alignment:
Q  157 gttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatct 218  Q
    ||||||||| |  ||||||||||||||||||||||||||||  |||||||  ||||||||||    
T  3716424 gttcgaacctgagacctcacagttgtgtgtgagtttatttttagtggattgtcacttcatct 3716485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 16770278 - 16770181
Alignment:
Q  102 aagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||| ||| ||||||| ||||||| ||||||| |||| |||||||| ||   || |||| || | || |||||||||||||||||||||||||||||    
T  16770278 aagtcttagctcaactggcaaatgccgaaattgtaaggtcggacgtcatggttcgagttcaaatctgggacctcacagttgtgtgtgagtttattttc 16770181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 32982478 - 32982352
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||| |||||| |||| || ||||||  || |  |||||||  ||| |||| |  |  ||||||||||||||||||||      
T  32982478 gtctagaagtcctagctcaactgataaatgccgaaactgtaaggccaaactttatgacccgaattcaaacctgagaaatcacagttgtgtgtgagtttga 32982379  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||| ||||||||||||    
T  32982378 tttcagtggtttactacttcatctaag 32982352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 9385742 - 9385826
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgcgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgt 182  Q
    |||| ||||||||  | ||||| |||||||  |||| ||||| |||||||||||| |||||||| ||| ||| |||||||||||||    
T  9385742 tctaaaagtcctaacttaactggcaaatgccgaattacaaggtcggacgtcgtga-ccgggttcaaacgcgggacctcacagttgt 9385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 4601424 - 4601551
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4601424 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 4601523  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||| ||||||||||    
T  4601524 ttttcagtggattaccagttcatctaag 4601551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 7824582 - 7824456
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  7824582 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 7824483  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  7824482 tttcagtggattaccacttcatctaag 7824456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 29689610 - 29689484
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  29689610 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 29689511  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  29689510 tttcagtggattaccacttcatctaag 29689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 54151809 - 54151683
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagtttat 54151710  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  54151709 tttcagtggattaccacttcatctaag 54151683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 54158266 - 54158392
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 54158365  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  54158366 tttcagtggattaccacttcatctaag 54158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 28844504 - 28844631
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta- 193  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||     
T  28844504 gtctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtttat 28844603  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  28844604 ttttcagtggattaccacttcatctaag 28844631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 43247779 - 43247652
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  43247779 agtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttta 43247680  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  43247679 ttttcagtggattaccacttcatctaag 43247652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 51666053 - 51665927
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||    
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtttat 51665954  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  51665953 tttcagtggattaccacttcatctaag 51665927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 55018162 - 55018040
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55018162 gtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 55018063  T
Q  195 tttcggtggattaccacttcatc 217  Q
    |||| ||||||||||||||||||    
T  55018062 tttcagtggattaccacttcatc 55018040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 1778851 - 1778977
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| ||| |||||    
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgtttgaatttat 1778950  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    ||||  |||||||||||||||||||||    
T  1778951 tttcaatggattaccacttcatctaag 1778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 52500837 - 52500964
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| |||||| |||||||| ||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||    
T  52500837 agtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagttta 52500936  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| || |||||||||||||||||||    
T  52500937 ttttcagtagattaccacttcatctaag 52500964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 9349788 - 9349679
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  9349788 tcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacca 9349689  T
Q  211 cttcatctaa 220  Q
    ||||||||||    
T  9349688 cttcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 35461610 - 35461481
Alignment:
Q  93 agagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtt 191  Q
    ||||||||||||| |||| ||||||| ||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  35461610 agagtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagtt 35461511  T
Q  192 tattttcggtggattaccacttcatctaag 221  Q
    ||||||| || ||||| || ||||||||||    
T  35461510 tattttctgtagattatcatttcatctaag 35461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 3113107 - 3112997
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  3113107 tcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattacca 3113008  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  3113007 cttcatctaag 3112997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 36229106 - 36228996
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  36229106 tcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggattacca 36229007  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  36229006 cttcatctaag 36228996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 42392934 - 42392807
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| ||| ||||| |||||||||| |||||||| |||||||||||||||    
T  42392934 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagttta 42392835  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  42392834 atttcagtggtttaccacttcatctaag 42392807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 38257400 - 38257305
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||||||| |||| | ||||||||||||||||||||    
T  38257400 cgaaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagcggattaccacttcatctaag 38257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 475402 - 475283
Alignment:
Q  102 aagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcgg 200  Q
    ||||| |||||||||||  |||||| |||||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||  ||| |    
T  475402 aagtcttagatcaactgggaaatgctgaaattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagttta-attcag 475304  T
Q  201 tggattaccacttcatctaag 221  Q
    || ||||||||||||||||||    
T  475303 tgaattaccacttcatctaag 475283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 33334608 - 33334734
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||  ||||||| |||||||||| ||||||||| |||||| | ||||||| |||| ||||||||||||||||||||||||     
T  33334608 gtctagaagtcctagctcaacttgcaaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagtttaa 33334707  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| || ||||| |||||||| ||||    
T  33334708 tttcagtagattatcacttcatataag 33334734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 7958569 - 7958694
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  |||||||||||||| | |||||| || || ||| | ||||| |||||||||||||||| ||||||||||| ||||| |||||||    
T  7958569 gtctagaagtcctacctcaactgacaaatgtcaaaattgtaaagcaggatgccgtgatccgggttcgaacccgggacctcacagttatgtgtaagtttat 7958668  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||  |||||||||||||||||||||    
T  7958669 ttttagtggattaccacttcatctaa 7958694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 41377584 - 41377705
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||| ||| || ||||||||||||| |||||||     |||||||||||||    
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac-----tgtgtgagtttat 41377678  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| | ||||||||||||||||||||    
T  41377679 tttcagcggattaccacttcatctaag 41377705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 28458663 - 28458788
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| || ||||||| || |||| |||||| |||||||||||||| |||| ||||||     
T  28458663 gtctagaagtcctaactcaactgacaaatgtcgaaattgcaaggccagatgtcgtgatcc-ggtttgaacccagaacctcacagttgcgtgtaagtttaa 28458761  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
     |||  |  ||||||||||||||||||    
T  28458762 cttcaataaattaccacttcatctaag 28458788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 29750621 - 29750746
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||  ||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||  |  |||||||| ||||| ||||| |||     
T  29750621 gtctagaagtactaactcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccggattcgaactagagacctcacatttgtgcgtgag-ttaa 29750719  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
     ||| ||||||||||||||||||||||    
T  29750720 attcagtggattaccacttcatctaag 29750746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 43775239 - 43775349
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| ||||||| |||| ||||||| |||||  | ||||||| |||||| ||||||||||| | |||||||| |||| |||||||||||    
T  43775239 tcaactggcaaatgccgaaattgtaaggtcggacgttgtgacttgcgttcgaatccggaatctcacagttgtatttgagtttaatttcagtggattacca 43775338  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  43775339 cttcatctaag 43775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 448987 - 448884
Alignment:
Q  112 tcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    |||||||||||||| | |||||| ||||||||||||||||| |||  ||||||||  | ||||||||||||| |||||||||| |||  |||||||||||    
T  448987 tcaactgacaaatgtcaaaattgtaaggccggacgtcgtgatccgaattcgaacctaggacctcacagttgtttgtgagtttaattttagtggattacca 448888  T
Q  211 cttc 214  Q
    ||||    
T  448887 cttc 448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 32001553 - 32001426
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||  |||||||  |||||| ||||||| ||||||| || || ||| || ||||||||| ||  | ||||||||||||||||||||||    
T  32001553 agtctagaagtcctacctcaactggtaaatgccgaaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagttta 32001454  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| |||  |||||||||||| ||||    
T  32001453 ttttcagtgatttaccacttcatataag 32001426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 40756856 - 40756729
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacg-tcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||||||  |||||||| |||||| ||| |||||||| | |||| || ||| |||| ||||||||||  |||||||||||| |||||||||||    
T  40756856 gtctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacgatcatgatccggattcgaacccgagacctcacagttgcgtgtgagttta 40756757  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| || | |||||||||||||||||    
T  40756756 atttcagtagtttaccacttcatctaag 40756729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 31255406 - 31255493
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgt 182  Q
    ||||||||||||||  |||||||||||||| |||||||  || || ||||||||||||||||||||||||||||  ||||||| ||||    
T  31255406 gtctagaagtcctaactcaactgacaaatgtcgaaattataaagctggacgtcgtgacccgggttcgaacccgggtcctcacaattgt 31255493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 50729523 - 50729650
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| ||||||||||||||| ||||||| |||| | |||||||||| | || |||||||  |  ||||| ||||| | ||||||||||    
T  50729523 agtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagttta 50729622  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     ||||  | |||||||||||||||||||    
T  50729623 atttcaatagattaccacttcatctaag 50729650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 50783326 - 50783199
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| ||||||||||||||| ||||||| |||| | |||||||||| | || |||||||  |  ||||| ||||| | ||||||||||    
T  50783326 agtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagttta 50783227  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     ||||  | |||||||||||||||||||    
T  50783226 atttcaatagattaccacttcatctaag 50783199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 55320453 - 55320402
Alignment:
Q  170 acctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  55320453 acctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaag 55320402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 51054702 - 51054827
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||  |||||||||||||| ||||||| ||||| || ||||  |||  ||||||||||| |  ||||||| | |||| ||| |||||| |    
T  51054702 tctagaagtcctaactcaactgacaaatgtcgaaattacaaggtcgaacgttatgattcgggttcgaactcaaaacctcataattgtttgtaagtttaat 51054801  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    ||  ||||||||||||||||||||||    
T  51054802 ttaagtggattaccacttcatctaag 51054827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 47635099 - 47635007
Alignment:
Q  129 aattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||| ||||| | |||||| ||||||||| || | ||||| ||||| ||||| |||||| |||| || |||||||||||||||||||    
T  47635099 aattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatgtgtaagtttaatttcagttgattaccacttcatctaag 47635007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 27230683 - 27230789
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    |||||||| |||||| |||||||||||||| ||| |||||||| || ||| ||| ||| |  |||||||||||||||| |||| |||| ||| |||||||    
T  27230683 tcaactgataaatgctgaaattgcaaggccagacatcgtgacctggattcaaactcgggat-tcacagttgtgtgtgaatttaatttcagtgaattacca 27230781  T
Q  211 cttcatct 218  Q
    ||||||||    
T  27230782 cttcatct 27230789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 51112588 - 51112521
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaaccc 166  Q
    ||||||||||| ||||||| ||||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  51112588 agaagtcctagctcaactggcaaatgccgaaattgctaggccggacgtcatgaccggggttcgaaccc 51112521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 8137748 - 8137635
Alignment:
Q  107 ctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggat 205  Q
    |||| |||||| |||||||| ||| |||||||| |||||||| ||||||| ||| ||| | | |||||||||||||  |||||||||| ||||  ||| |    
T  8137748 ctagctcaactaacaaatgcaaaaattgcaaggtcggacgtcatgacccgagtttgaatctgaaacctcacagttg--tgtgagtttaatttcaatggct 8137651  T
Q  206 taccacttcatctaag 221  Q
    |||||||| |||||||    
T  8137650 taccactttatctaag 8137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 8151380 - 8151471
Alignment:
Q  127 gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatct 218  Q
    |||||||||| | || ||||||||| |||||||||||||||  | ||||||||| ||||| |||||| ||||  |||||||||  |||||||    
T  8151380 gaaattgcaaagacgaacgtcgtgatccgggttcgaacccgagatctcacagttatgtgtcagtttaatttcaatggattaccggttcatct 8151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 47770329 - 47770449
Alignment:
Q  100 agaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||||||||| |||||||| ||||| ||||||||||||  |||||||||||||| || |||||| ||| || |||  | |  |||||||||||| ||||    
T  47770329 agaagtcctagctcaactgataaatgtcgaaattgcaagctcggacgtcgtgacctggattcgaatccgaaatctcgtaat--tgtgtgagtttaatttc 47770426  T
Q  199 ggtggattaccacttcatctaag 221  Q
      ||| ||| |||||||||||||    
T  47770427 aatggtttatcacttcatctaag 47770449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 2590928 - 2590812
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||| ||||||||  |||||||  ||||| |||||||||||||||| || |||||| | |||||||||||| | |||||||         |||||||| |    
T  2590928 tctataagtcctaactcaactggaaaatgtcgaaattgcaaggccgaacatcgtgatctgggttcgaaccctggacctcac---------tgagtttaat 2590838  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    ||| ||||||||||||||||||||||    
T  2590837 ttcagtggattaccacttcatctaag 2590812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 27396857 - 27396945
Alignment:
Q  100 agaagtcctagatcaactgacaaa-tgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtg 187  Q
    ||||||||||| |||||||||||| ||| |||||||  |||||||| | | ||||| |||||||||||||| ||||| || |||||||||    
T  27396857 agaagtcctagctcaactgacaaaatgccgaaattgttaggccggatgccatgaccggggttcgaacccggtacctc-cacttgtgtgtg 27396945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 43023695 - 43023747
Alignment:
Q  155 gggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggatta 207  Q
    ||||||||| ||||||||||||| || |||||||||||| |||  ||||||||    
T  43023695 gggttcgaatccggaacctcacatttatgtgtgagtttaatttaagtggatta 43023747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 45686152 - 45686096
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgaccc 154  Q
    |||||||| ||| ||||||  ||||||| ||||||| ||||||||||||||||||||    
T  45686152 tagaagtcttagctcaactagcaaatgccgaaattgaaaggccggacgtcgtgaccc 45686096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 53182750 - 53182858
Alignment:
Q  113 caactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccac 211  Q
    |||||| ||||||| |||||||||||| | ||||| |||| |||| || ||||  |  |||||||| || |||||||||||| |||  | || |||||||    
T  53182750 caactggcaaatgctgaaattgcaaggtcagacgttgtgatccggatttgaacatgatacctcacaattatgtgtgagtttaattttaggggtttaccac 53182849  T
Q  212 ttcatctaa 220  Q
    |||||||||    
T  53182850 ttcatctaa 53182858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 990 - 864
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 891  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  890 tttcagtggattaccacttcatctaag 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 6602646 - 6602520
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 6602547  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  6602546 tttcagtggattaccacttcatctaag 6602520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 6678099 - 6677973
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 6678000  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  6677999 tttcagtggattaccacttcatctaag 6677973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 32333114 - 32333240
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  32333114 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 32333213  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  32333214 tttcagtggattaccacttcatctaag 32333240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 35779626 - 35779499
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  35779626 agtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 35779527  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  35779526 ttttcagtggattaccacttcatctaag 35779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 28817256 - 28817382
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  28817256 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagtttat 28817355  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  28817356 tttcagtggattaccacttcatctaag 28817382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 70651 - 70525
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtttat 70552  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  70551 tttcagtggattaccacttcatctaag 70525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 42192767 - 42192641
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||||    
T  42192767 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagtttat 42192668  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  42192667 tttcagtggattaccacttcatctaag 42192641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 1468 - 1342
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||| ||||||| ||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  1468 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagtttat 1369  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  1368 tttcagtggattaccacttcatctaag 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 1078776 - 1078650
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| |||||||  |||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  1078776 gtctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagtttat 1078677  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  1078676 tttcagtggattaccacttcatctaag 1078650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 7813322 - 7813447
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||| | ||||||| ||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  7813322 gtctagaagtcctagctcaaccggcaaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtttat 7813421  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||| |||||||||||||||||||||    
T  7813422 tttcagtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 7792661 - 7792787
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||| |||||| ||||| ||||||||||||||| | |||||||||||||||||||||||    
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtttat 7792760  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||| ||||||||||||    
T  7792761 tttcagtggattactacttcatctaag 7792787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 42885192 - 42885300
Alignment:
Q  114 aactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccact 212  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  42885192 aactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccact 42885291  T
Q  213 tcatctaag 221  Q
    |||||||||    
T  42885292 tcatctaag 42885300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 4531110 - 4530984
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||| || ||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||     
T  4531110 gtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagtttaa 4531011  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  4531010 tttcagtggtttaccacttcatctaag 4530984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 9292017 - 9292144
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| |||||| |||||||| || ||||||||| ||||||||  ||||||| ||| || |||||||||||||||||||||    
T  9292017 agtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgacccgaattcgaactcgggacttcacagttgtgtgtgagttta 9292116  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  9292117 ttttcagtggattaccacttcatctaag 9292144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 40911220 - 40911346
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  40911220 agtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaa-ccgggacctcacaactgtgtgtgagttta 40911318  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  40911319 atttcagtggcttaccacttcatctaag 40911346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 12534847 - 12534722
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| | | ||||||||  || |||||||||    
T  12534847 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagt--tgcgtgagttta 12534750  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| || |||||||||||||||||||    
T  12534749 ttttcagtagattaccacttcatctaag 12534722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 10963368 - 10963244
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| |||||| |||||||| |||| |||| || ||||||||||||| ||||||||||||||||  |||||||    
T  10963368 gtctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttgtgtg--agtttat 10963271  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  10963270 tttcagtggattaccacttcatctaag 10963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 39303313 - 39303436
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-tttatttt 197  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||  ||||| |||||||  |||||||||||||||||||| |||| |||    
T  39303313 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagttttaattt 39303412  T
Q  198 cggtggattaccacttcatctaag 221  Q
    | ||||||||||||||||||||||    
T  39303413 cagtggattaccacttcatctaag 39303436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 6099572 - 6099698
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||| | |||||||||     
T  6099572 gtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacccgaaacctcacaattgcgcgtgagtttag 6099671  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||  |||| |||||||||||||||||    
T  6099672 ttttagtggtttaccacttcatctaag 6099698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 31532222 - 31532128
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaa 220  Q
    ||||||||||||||||||||| ||||||||| || ||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  31532222 cgaaattgcaaggccggacgttgtgacccggatttgaaccggggacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa 31532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 45264767 - 45264642
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||| ||||||| ||||||||| || || |||||||||| ||||||||||||||| ||||||||||| ||||||||||||     
T  45264767 gtctagaagtcctaactcaactggcaaatgccgaaattgca-ggtcgaacgtcgtgactcgggttcgaacccgggacctcacagttttgtgtgagtttaa 45264669  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||| ||||||    
T  45264668 tttcagtggattaccacttcctctaag 45264642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 18386708 - 18386808
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||||||||||| |||||||||||| |||| ||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  18386708 gtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagtttat 18386807  T
Q  195 t 195  Q
    |    
T  18386808 t 18386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 18752345 - 18752467
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||||||||| ||||||||||||| | ||||||| |||| |||||||||||| | ||||||||||||||||||| ||||||||||||| ||||| ||||    
T  18752345 agaagtcctagttcaactgacaaataccgaaattgtaaggtcggacgtcgtgatcggggttcgaacccggaaccttacagttgtgtgtgggtttaatttc 18752444  T
Q  199 ggtggattaccacttcatctaag 221  Q
     |||||||  |||||||| ||||    
T  18752445 agtggattgacacttcatntaag 18752467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 3822396 - 3822522
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||| ||||||| ||||||| |||| ||||||| ||||||||||||||||||| | | ||||||||||||||||||||||     
T  3822396 gtctagaagttctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgacccgggttcgaacccaggatctcacagttgtgtgtgagtttaa 3822495  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||  ||| ||||||||||| ||||||    
T  3822496 ttttagtgaattaccacttcttctaag 3822522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 5385369 - 5385459
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcat 216  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  5385369 cgaaattgcaaggctggacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcat 5385459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 39435282 - 39435408
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||| |||||||| ||| | |||||||||||||  ||||||||||||||||||||||||     
T  39435282 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacagttgtgtgtgagtttaa 39435381  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||  ||||||||| ||||||||||||    
T  39435382 tttatgtggattacgacttcatctaag 39435408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 41849343 - 41849234
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| |||||||||||| |||||||||||| | ||||||||| |||||||||||| |||||||||||||||| |||| || ||||||||    
T  41849343 tcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaatttcagt-gattacca 41849245  T
Q  211 cttcatctaag 221  Q
     ||||||||||    
T  41849244 tttcatctaag 41849234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 31969849 - 31969722
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||| ||| | || || ||||||| |||||| ||||||| |||||| ||| |||||||||||| ||| |||||| |||||||||||| ||||    
T  31969849 agtctagaagtcatagcttaattggcaaatgccgaaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtgaattta 31969750  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  31969749 atttcagtggtttaccacttcatctaag 31969722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 41753109 - 41753005
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||| |||  |||||||||  || ||||||||||||||| ||||||    
T  41753109 agtctagaagtcctagctcaactgacaaatgtcgaaattgcaagaccggatgtcgtgatccgaattcgaacccaaaatctcacagttgtgtgtaagttta 41753010  T
Q  194 ttttc 198  Q
     ||||    
T  41753009 atttc 41753005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 13891121 - 13891216
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||| |||||||||  ||  |||||| ||||||||||||  | ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  13891121 cgaaagtgcaaggccaaacaccgtgactcgggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaag 13891216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 29425357 - 29425477
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||| || ||||||| ||| ||||||||||||||||| |||||||||      ||||| | ||| || |||||||||||||||     
T  29425357 gtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgacccggg------cccgggatctcgcaattgtgtgtgagtttaa 29425450  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  29425451 tttcagtggattaccacttcatctaag 29425477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 9775134 - 9775044
Alignment:
Q  131 ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||| |  |||||| | |||||||||||||||||||||||||| |||||||||||| |||   |||||||| ||||||||||||    
T  9775134 ttgcaaggccgaaaatcgtgatctgggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaag 9775044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 33731551 - 33731466
Alignment:
Q  136 aggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||| ||| ||| ||||| |||||||||||||||||| |||  |||| |||||||||| ||||||    
T  33731551 aggccagacgtcgtgacccgggttcaaactcgggacctcccagttgtgtgtgagtttaattttagtggtttaccacttcttctaag 33731466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 40932710 - 40932834
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||| ||  | |||||||||||| |||||||| |||   ||||||||||| |||| |||||| ||| || ||||||||||||||||| |||| |    
T  40932710 tctagaagtcataatttaactgacaaatgtcgaaattgtaagattggacgtcgtgatccggattcgaatccgaaatctcacagttgtgtgtgactttaat 40932809  T
Q  196 ttcggtggattaccacttcatctaa 220  Q
    ||  || ||||||||||||||||||    
T  40932810 tttagtagattaccacttcatctaa 40932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 31695397 - 31695271
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||| ||||||| || ||| | |||||||||||  ||| ||| |||  ||| |||||||| || |||||||| |||||||||||||||     
T  31695397 gtctagaagttctagctcaactggcacatgtcaaaattgcaaggttggatgtcatgattcggattcgaacctgggacctcacaattgtgtgtgagtttaa 31695298  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    ||||  ||| |||||||||||||||||    
T  31695297 tttcaatggtttaccacttcatctaag 31695271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 14400726 - 14400841
Alignment:
Q  107 ctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggat 205  Q
    |||| ||||||||||||| | ||||||||| || |||||||||| | | || || |||||||| |||||||| ||||| ||||||||| ||   |||| |    
T  14400726 ctagctcaactgacaaattctgaaattgcacggtcggacgtcgtaaactggatttgaacccgggacctcacaattgtgagtgagtttaattcaagtggtt 14400825  T
Q  206 taccacttcatctaag 221  Q
    ||||||||||||||||    
T  14400826 taccacttcatctaag 14400841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 7403806 - 7403697
Alignment:
Q  112 tcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| |||||| | |||||| |||| ||||||||||||| || ||||||| |||  || |||||||||| |||||| ||| |||| || ||||||||    
T  7403806 tcaactgccaaatgtcaaaattgtaaggtcggacgtcgtgactcgagttcgaatccgagacatcacagttgtttgtgagcttaatttcagt-gattacca 7403708  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  7403707 cttcatctaag 7403697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 20269607 - 20269656
Alignment:
Q  172 ctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  20269607 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaag 20269656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 21056236 - 21056285
Alignment:
Q  172 ctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  21056236 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaag 21056285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 22979604 - 22979690
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttg 181  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||  || ||||||||| ||  |||| || |||| ||||||||||||    
T  22979604 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaagctcgaacgtcgtgatccaagttcaaagccgggacctcacagttg 22979690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 42364829 - 42364704
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||| ||||||| |||||||||| ||| |||||  |||   ||||| ||| ||| ||  |||||||||||||||||||||     
T  42364829 gtctagaagtcctatctcaactgccaaatgccgaaattgcaaagccagacgttatgatt-gggtttgaatccgaaatttcacagttgtgtgtgagtttaa 42364731  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| || | ||||||||| |||||||    
T  42364730 tttcagtagtttaccactttatctaag 42364704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 2907054 - 2907140
Alignment:
Q  134 caaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc-ggtggattaccacttcatctaag 221  Q
    ||||| |||||||||||| ||||||| |||||||| ||||||||||  | || ||||||| ||||  ||||||||||||||| ||||||    
T  2907054 caaggtcggacgtcgtgatccgggtttgaacccgggacctcacagt--tatgggagtttaatttcaagtggattaccacttcgtctaag 2907140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 22203716 - 22203768
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaa 163  Q
    ||||||||||||| | |||||||||||| | ||||||||||||||||||||||    
T  22203716 tcaactgacaaataccgaaattgcaaggtcagacgtcgtgacccgggttcgaa 22203768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 56480 - 56607
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  56480 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 56579  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  56580 ttttcagtggattaccacttcatctaag 56607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 10101 - 9975
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtttat 10002  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  10001 tttcagtggattaccacttcatctaag 9975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 4106738 - 4106864
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 4106837  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  4106838 tttcagtggattaccacttcatctaag 4106864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 23358185 - 23358311
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  23358185 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 23358284  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  23358285 tttcagtggattaccacttcatctaag 23358311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 31770660 - 31770534
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  31770660 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 31770561  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  31770560 tttcagtggattaccacttcatctaag 31770534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 44083940 - 44084065
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  44083940 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 44084039  T
Q  195 tttcggtggattaccacttcatctaa 220  Q
    |||| |||||||||||||||||||||    
T  44084040 tttcagtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 40058237 - 40058364
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||  ||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  40058237 agtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagttta 40058336  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||||||||||||||||||||||    
T  40058337 ttttcagtggattaccacttcatctaag 40058364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 43753878 - 43753755
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-tttatttt 197  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||| |||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 43753779  T
Q  198 cggtggattaccacttcatctaag 221  Q
    | ||||||||||||||||||||||    
T  43753778 cagtggattaccacttcatctaag 43753755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 2146636 - 2146762
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||| ||||||    
T  2146636 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtgggtttat 2146735  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  2146736 tttcagtggattaccacttcatctaag 2146762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 4107325 - 4107435
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4107325 tcaactggcaaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacca 4107424  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  4107425 cttcatctaag 4107435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 25112375 - 25112249
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||| | |||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  25112375 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgggtttat 25112276  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  25112275 tttcagtggattaccacttcatctaag 25112249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 25546403 - 25546277
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||  |||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||     
T  25546403 gtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttaa 25546304  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  25546303 tttcagtggtttaccacttcatctaag 25546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 47250378 - 47250253
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| || | |||  |||||||||||||||||||    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagtttatt 47250279  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    ||| ||||||||||||||||||||||    
T  47250278 ttcagtggattaccacttcatctaag 47250253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 47570815 - 47570720
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47570815 cgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 47570720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 27229600 - 27229484
Alignment:
Q  102 aagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-tttattttcg 199  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||     
T  27229600 aagtcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttca 27229501  T
Q  200 gtggattaccacttcat 216  Q
    |||||||||||||||||    
T  27229500 gtggattaccacttcat 27229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 8439081 - 8439204
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    |||||||||||| ||||||| ||||||| ||| |||||||| ||||||| ||||||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtgaatttatttt 8439180  T
Q  198 cggtggattaccacttcatctaag 221  Q
    | ||||||||||||||||||||||    
T  8439181 cagtggattaccacttcatctaag 8439204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 38781304 - 38781210
Alignment:
Q  127 gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38781304 gaaattgcaaggccgaatgtcgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 38781210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 48146754 - 48146879
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||| || |||| |||||||| |||||| |||||||||||| | || |||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  48146754 tctagaggttctagctcaactgaaaaatgcagaaattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttaatt 48146853  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    |||  |||||||||||||||||||||    
T  48146854 ttcattggattaccacttcatctaag 48146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 39514080 - 39513988
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatct 218  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  39514080 cgaaattgcaaggccggacgtcgtgacccgagttcgaacccgggaccttacagttatgtgtgagtttaatttcggtggattaccacttcatct 39513988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 7162916 - 7162792
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||| ||||||||| ||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||| |  |||||||||||||    
T  7162916 gtctaaaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaat--tgtgtgagtttat 7162819  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  7162818 tttcagtggattaccacttcatctaag 7162792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 43203305 - 43203432
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  43203305 agtctagaagtcctagatgaactggcaaatgccgaaattgtaaggcgggacgccgtgacccgggttcgaacccgggaccttacagttgtgtgtgagttta 43203404  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||| | |||||||  |||||||| ||||    
T  43203405 tttacagtggattttcacttcatataag 43203432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 15635008 - 15634882
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||| ||| ||||||  ||||||| ||||||| || | ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  15635008 agtctagaagtcatagctcaactagcaaatgccgaaattgtaaagtcggacgtcgtgacccggattcgaaaccggaacttcacagttgtgtgtgagttta 15634909  T
Q  194 ttttcggtggattaccacttcatctaa 220  Q
    ||||| || ||||||||||||||||||    
T  15634908 ttttcagtagattaccacttcatctaa 15634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 47557781 - 47557907
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  |||||||  |||||| |||||| ||||| || ||||| |||||||||||||||||||||||||||||||||| ||||||||||     
T  47557781 gtctagaagtcctaactcaactggtaaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacagttgtatgtgagtttaa 47557880  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  47557881 tttcagtggtttaccacttcatctaag 47557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 11355822 - 11355949
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| |||||| |||||||| |||||||||||| |||||||  ||| | || ||||||||||| | ||||||||||||||||||||||    
T  11355822 agtctagaagttctagttcaactaacaaatgccgaaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagttta 11355921  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| ||||||||||||||||||||||    
T  11355922 atttcagtggattaccacttcatctaag 11355949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 41183833 - 41183941
Alignment:
Q  114 aactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccact 212  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||   ||||||||||| ||||||||||||||||| |||||||| ||||    
T  41183833 aactggcaaatgccgaaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatcact 41183932  T
Q  213 tcatctaag 221  Q
    |||||||||    
T  41183933 tcatctaag 41183941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 5772947 - 5772821
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| ||||| | ||||||| |||||||||||| |||||   ||||||||||||||||| || |||||||||||||||||||||||||     
T  5772947 gtctagaagtcttagctcaacgggcaaatgccgaaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaa 5772848  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||| ||||    
T  5772847 tttcagtggtttaccacttcatttaag 5772821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 48444280 - 48444154
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||| |||||| ||||||| ||| | ||||||||||| | |||||||||||| | || |||||||||||||| ||||||     
T  48444280 gtctagaagtcctagctcaactgaaaaatgccgaaattgtaagactggacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagtttaa 48444181  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||| ||||||||||||||||||    
T  48444180 tttcagtgaattaccacttcatctaag 48444154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 38033729 - 38033853
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||  ||||||| ||||||| ||||||| |||| ||||| | |||| |||||||| || |||| |||||||||||||||||||||||||    
T  38033729 gtctagaagttctaactcaactggcaaatgccgaaattgtaaggtcggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtttat 38033828  T
Q  195 tttcggtggattaccacttcatcta 219  Q
    |||| ||||| ||||||||||||||    
T  38033829 tttcagtggagtaccacttcatcta 38033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 5587291 - 5587406
Alignment:
Q  107 ctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggat 205  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||| | |||||||| ||  ||||||||||| |||  ||||||    
T  5587291 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggat 5587390  T
Q  206 taccacttcatctaag 221  Q
    ||||||||||||||||    
T  5587391 taccacttcatctaag 5587406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 5592252 - 5592367
Alignment:
Q  107 ctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggat 205  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||| | |||||||| ||  ||||||||||| |||  ||||||    
T  5592252 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggat 5592351  T
Q  206 taccacttcatctaag 221  Q
    ||||||||||||||||    
T  5592352 taccacttcatctaag 5592367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 29484876 - 29484757
Alignment:
Q  103 agtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggt 201  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||| ||| | ||||| |||||||| |||||||| |||| |||||||||| |||| ||    
T  29484876 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagt 29484777  T
Q  202 ggattaccacttcatctaag 221  Q
    |||||| |||||||| ||||    
T  29484776 ggattatcacttcatataag 29484757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 32606458 - 32606332
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||| |||  ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||  |||| |||||| | ||||| ||||     
T  32606458 gtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagttttatgtgaatttaa 32606359  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||| ||||||| ||||||||||    
T  32606358 tttcagtgaattaccaattcatctaag 32606332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 28603027 - 28603137
Alignment:
Q  112 tcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacca 210  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||| | |||||||||||  || ||||| |||| |||||||||| | || |||||||||||    
T  28603027 tcaactggcaaatgccgaaatcgcaaggccggacgtcgtgacctgagttcgaacccgagacttcacaattgtatgtgagtttaatctcagtggattacca 28603126  T
Q  211 cttcatctaag 221  Q
    |||||||||||    
T  28603127 cttcatctaag 28603137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 13887174 - 13887282
Alignment:
Q  99 tagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatttt 197  Q
    |||||||| ||  ||||||| ||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| |||||||| |||    
T  13887174 tagaagtcttaactcaactggcaaatgccgaacttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagt--tgtatgagtttaattt 13887271  T
Q  198 cggtggattac 208  Q
    | |||||||||    
T  13887272 cagtggattac 13887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 43171067 - 43170941
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||||||||||||||| |||| ||||| || | |  || || ||||||| ||||||||||     
T  43171067 gtctataagtcctaactcaactgacaaatgccgaaattgcaaggccggacgtcgtaacccaggttcaaatcggagacttcccagttgtatgtgagtttaa 43170968  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    ||||  ||||||||||| |||||||||    
T  43170967 tttcaatggattaccacgtcatctaag 43170941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 4001939 - 4001846
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||| |||   |||||||||||| ||||  ||| |||||||||||||||||    
T  4001939 cgaaattgcaaggccggatgtcgtgacccgggttcgaactcgggacctctcag--ctgtgtgagtttaatttcaatggtttaccacttcatctaag 4001846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 46427360 - 46427463
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||| |||| |||| |||||||||||||  | |||||||||||  ||||||| |||| ||| |||||| |||||||||||||||||||||||||||||     
T  46427360 gtctaaaagttctagctcaactgacaaatatcaaaattgcaaggttggacgtcatgactcggattcgaatccggaacctcacagttgtgtgtgagtttaa 46427459  T
Q  195 tttc 198  Q
    ||||    
T  46427460 tttc 46427463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 10220600 - 10220475
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||| |||| || ||| ||| ||||| ||||||| ||| | ||||||||| ||| |||||||||||| ||||||||||||     
T  10220600 gtctagaagtcctaactcaactggcaaaagccaaaattgtaaggcaggacgtcatgatctgggttcgaatccgaaacctcacagttttgtgtgagtttaa 10220501  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||| ||||||||||    
T  10220500 tttcagtggtttacca-ttcatctaag 10220475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 42081743 - 42081621
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||||||||||||| ||| ||| |||||| | ||||||||||  || |||| |||| ||||||||||||| ||| |||||||||||||||  ||||||||    
T  42081743 tctagaagtcctagctcagctggcaaatgtcaaaattgcaagatcgaacgttgtgatccgggttcgaacctgga-cctcacagttgtgtg--agtttatt 42081647  T
Q  196 ttcggtggattaccacttcatctaag 221  Q
    ||| ||| |||||||||| |||||||    
T  42081646 ttcagtgaattaccactttatctaag 42081621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 34763454 - 34763560
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||| ||||||||||||||||||            ||||||||||||||||||||||||     
T  34763454 gtctagaagtcctagctcaactggaaaatgtcgaaattgcaagggcggacgtcgtgacccggg------------acctcacagttgtgtgtgagtttaa 34763541  T
Q  195 tttcggtggattaccactt 213  Q
    |||| ||||||||||||||    
T  34763542 tttcagtggattaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 19630718 - 19630670
Alignment:
Q  173 tcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19630718 tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 19630670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 25872761 - 25872889
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    ||||||||||||||||  |||| || ||||||| || ||| ||||| |||||||||||| || ||||||||||    |||| ||| |||||| |||||||    
T  25872761 gagtctagaagtcctaactcaattggcaaatgccgatattacaaggtcggacgtcgtgatccaggttcgaacctatgaccttacaattgtgtatgagttt 25872860  T
Q  193 attttcggtggattaccacttcatctaag 221  Q
    |||||| |||  |||||||||||||||||    
T  25872861 attttctgtgatttaccacttcatctaag 25872889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 27915709 - 27915582
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacc-cgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||||||  |||||||  |||||| |||||||||||| ||||||||||||||  | |||||||||    | ||||||||||||| ||||||||    
T  27915709 gtctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgaccttgagttcgaacctaagatctcacagttgtgtatgagttta 27915610  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     ||||  || ||||||||||||||||||    
T  27915609 atttcaatgaattaccacttcatctaag 27915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 35309869 - 35309980
Alignment:
Q  111 atcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattacc 209  Q
    ||||||||||||| |  ||||||| ||||||||||||| ||||| || |||||| |||| | |||||| ||||||| ||||||| |||| |||| ||| |    
T  35309869 atcaactgacaaaagttgaaattgtaaggccggacgtcttgacctggtttcgaatccgggatctcacaattgtgtgcgagtttaatttcagtggtttatc 35309968  T
Q  210 acttcatctaag 221  Q
    ||||||||||||    
T  35309969 acttcatctaag 35309980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 31288292 - 31288226
Alignment:
Q  155 gggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||| | |||| ||||||||||||||| |||||| |||| |||| |||||||||||||||||    
T  31288292 gggttcgaatctggaatctcacagttgtgtgtaagtttaatttcagtggtttaccacttcatctaag 31288226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 23036330 - 23036208
Alignment:
Q  97 tctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 195  Q
    |||| ||||||||| |||||||||||||| | |||||  |||| |||||||  |||| | | ||||||| | ||||||||||||| ||||  |||||| |    
T  23036330 tctaaaagtcctagttcaactgacaaatgtcaaaattataaggtcggacgttatgactcagattcgaactcagaacctcacagttatgtg--agtttaat 23036233  T
Q  196 ttcggtggattaccacttcatctaa 220  Q
    |||  ||||||||||||||||||||    
T  23036232 ttcaatggattaccacttcatctaa 23036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 29255716 - 29255788
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaaccc 166  Q
    ||||||||||| |||| ||||||| ||||||| ||| ||||||||  ||||||||||| ||||||||||||||    
T  29255716 agtctagaagttctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtgatccgggttcgaaccc 29255788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 28111059 - 28110936
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||  |||||||||||||| ||||||||||||  ||||||||||||||  | || ||||||| ||| ||| | |||| |||||| |||     
T  28111059 gtctagaagtcttaactcaactgacaaatgtcgaaattgcaagatcggacgtcgtgacctagatttgaacccgaaacttcatatttgtttgtgagattaa 28110960  T
Q  195 tttcggtggattaccacttcatct 218  Q
    ||||  |||||||| |||| ||||    
T  28110959 tttcaatggattactactttatct 28110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 47961083 - 47960980
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||  ||||||  ||||||| ||| || ||||| | |||||| ||| |||||||||||||||| |||||  |||||||||||||||||     
T  47961083 gtctagaagtcttaactcaacttgcaaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagtttaa 47960984  T
Q  195 tttc 198  Q
    ||||    
T  47960983 tttc 47960980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 35577959 - 35577878
Alignment:
Q  140 cggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||| |||||||||||  || ||||| |||||||| |||||| ||||  |||||||| | ||||||||||    
T  35577959 cggatgtcgtgacccgagttcgaacccgagacttcacaattgtgtgtaagtttaatttcaatggattacaatttcatctaag 35577878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 5463078 - 5462955
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||  ||||||||||||| | ||| |||||| |  ||| || |||| |||| |||||||| |  | ||||||||||||||||||||||     
T  5463078 gtctagaagtcttaactcaactgacaaatactaaaattgcaatgttggatgttgtgatccggattcgaacctgagatctcacagttgtgtgtgagtttaa 5462979  T
Q  195 tttcggtggattaccacttcatct 218  Q
    ||||  ||||  ||||||||||||    
T  5462978 tttcaatggagaaccacttcatct 5462955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 18506403 - 18506281
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    |||||||||||||||  ||||| | |||||  ||| |||||||| ||||  || ||| ||| |||||||||||  || ||||||| |||||||||||||     
T  18506403 gtctagaagtcctagcacaactaaaaaatgttaaaattgcaaggtcggatatcatgatccgagttcgaacccgagacttcacagt-gtgtgtgagtttaa 18506305  T
Q  195 tttcggtggattaccacttcatct 218  Q
    |||| |||| ||||| ||||||||    
T  18506304 tttcagtggtttaccgcttcatct 18506281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 25504059 - 25503950
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||  ||| |||||||||||||| | ||||||||| |||||||||||| ||||   || ||||||   |||||| |||   ||||||||||||    
T  25504059 gtctagaagttttagttcaactgacaaatgtcaaaattgcaaagccggacgtcgtaacccaaatttgaacccaagacctcatagt--cgtgtgagtttat 25503962  T
Q  195 tttcggtggatt 206  Q
    |||| |||||||    
T  25503961 tttcagtggatt 25503950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 40642974 - 40643046
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccg 167  Q
    |||||||| || ||| |||||||||||||| |||||||| |||||| ||| | |||| |||||||| ||||||    
T  40642974 gtctagaaatcttagctcaactgacaaatgtcgaaattgtaaggccagacattgtgatccgggttcaaacccg 40643046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 33704216 - 33704342
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33704315  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||| ||||    
T  33704316 tttcagtggattaccacttcatttaag 33704342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 33621494 - 33621620
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  33621494 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 33621593  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||| |||||||||||||||||    
T  33621594 tttcagtggtttaccacttcatctaag 33621620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 4464126 - 4464253
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  4464126 agtctagaagttctagttcaactgacaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagttta 4464225  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  4464226 atttcagtggtttaccacttcatctaag 4464253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 11571999 - 11572110
Alignment:
Q  87 aaagaaagagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtg 185  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  11571999 aaagtaagagtctagaagtcctagctcaactaacaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtg 11572098  T
Q  186 tgagtttatttt 197  Q
    ||||||||||||    
T  11572099 tgagtttatttt 11572110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 21037290 - 21037416
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| |||| ||||||| ||||||| |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||||    
T  21037290 agtctagaagttctagctcaactggcaaatgctgaaattgcaaggccggacgttgtgactcgggttcgaatccgga-cctcacagttgtgtgtgagttta 21037388  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
    ||||| ||| ||||||||||||||||||    
T  21037389 ttttcagtgaattaccacttcatctaag 21037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 28322931 - 28323058
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  28322931 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagttta 28323030  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  28323031 gtttcagtggtttaccacttcatctaag 28323058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 21000691 - 21000815
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||||| ||||||||| |||||    
T  21000691 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtgggttta 21000790  T
Q  194 ttttcggtggattaccacttcatct 218  Q
     |||| |||| ||||||||||||||    
T  21000791 atttcagtggtttaccacttcatct 21000815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 361011 - 361137
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| ||| ||| ||||||| ||| ||||||||||| || ||||||| ||||||||||||||||||||||||||| | ||||||||||     
T  361011 gtctagaagtcttagctcatctggcaaatgccaaaattgcaaggccgaacatcgtgacacgggttcgaacccggaacctcacagttatatgtgagtttaa 361110  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| |||||||| |||||||||||||    
T  361111 tttcagtggattaacacttcatctaag 361137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 29009774 - 29009652
Alignment:
Q  100 agaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttc 198  Q
    ||||||||||| ||||| ||||||||| ||| ||| ||||||||||||| |||||||  |||||||| || ||||||||||||||||||||||||||||     
T  29009774 agaagtcctagttcaacggacaaatgctgaagttgtaaggccggacgtcatgacccgaattcgaacctgggacctcacagttgtgtgtgagtttattttt 29009675  T
Q  199 ggtggattaccacttcatctaag 221  Q
     ||| ||||||||||||||||||    
T  29009674 agtgaattaccacttcatctaag 29009652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 24619209 - 24619081
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 192  Q
    ||||||||||||||||  |||||||||||||| | |||||| ||||||| ||||||||||||| |||||| ||||  |||||| | ||||||||||||||    
T  24619209 gagtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagttt 24619110  T
Q  193 attttcggtggattaccacttcatctaag 221  Q
    | |||| || |||||||||||||||||||    
T  24619109 aatttcagtcgattaccacttcatctaag 24619081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 35218767 - 35218642
Alignment:
Q  85 aaaaagaaagagtctagaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtg 183  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||            ||||||||||||||    
T  35218767 aaaaaaaaaaagtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccggg------------acctcacagttgtg 35218680  T
Q  184 tgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  35218679 tgtgagtttattttcagtggattaccacttcatctaag 35218642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 2959149 - 2959272
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||  ||||||  ||||||| |||||||||||||||||  |||||||   ||||||||||||  ||||||||||||||||||||||||     
T  2959149 gtctagaagtcctaactcaactagcaaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagtttaa 2959248  T
Q  195 tttcggtggattaccacttcatct 218  Q
    |||| ||||| |||||||||||||    
T  2959249 tttccgtggaataccacttcatct 2959272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 19145503 - 19145596
Alignment:
Q  127 gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||||||||||  || |||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||||||||    
T  19145503 gaaattgcaaggccggacgtcgtgacccgtttt-gaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatctaag 19145596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 12252023 - 12252149
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||||||||| | || |||||||| ||||| ||||||||| ||||| |||||||  |||||| |||||||||||||||||     
T  12252023 gtctagaagtcctagctcaactgacaaataccgagattgcaagaccggatgtcgtgaccagggtttgaacccgagacctcatagttgtgtgtgagtttaa 12252122  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||   ||| |||||||||||| ||||    
T  12252123 ttttaatggcttaccacttcatttaag 12252149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 16518456 - 16518547
Alignment:
Q  128 aaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||||| ||||||| |||||| |||||||||||| | | ||||||||  ||||||||||||||||| ||||||||||| ||||||||||    
T  16518456 aaattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagt--tgtgtgagtttattttcagtggattaccatttcatctaag 16518547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 10999536 - 10999416
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||| ||| |||| |||||||||| |||| ||||||| ||||||  |||| || ||| |||| ||  || ||||||||||| ||||||||||     
T  10999536 gtctagaagtcatagctcaattgacaaatgccgaaactgcaaggtcggacgaagtgatccaggtacgaatccaaaatctcacagttgtatgtgagtttaa 10999437  T
Q  195 tttcggtggattaccacttca 215  Q
    |||| ||||||||||||||||    
T  10999436 tttcagtggattaccacttca 10999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 32289347 - 32289467
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||||||||| ||||  |||||| ||||||| ||||||||||| ||||| || |||| |||  ||||||| ||  ||||||||||||||||| ||||||    
T  32289347 agtctagaagttctag--caactggcaaatgccgaaattgcaag-ccggatgttgtgatccgaattcgaactcgagacctcacagttgtgtgtaagttta 32289443  T
Q  194 ttttcggtggattaccacttcatc 217  Q
    || || ||| ||||||||||||||    
T  32289444 ttatcagtgaattaccacttcatc 32289467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 17590443 - 17590392
Alignment:
Q  142 gacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||||||||||    
T  17590443 gacgttgtgactcgggttcgaacccggagcctcacagttgtgtgtgagttta 17590392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 22576232 - 22576307
Alignment:
Q  146 tcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||  ||||  || ||||||||||| ||||||    
T  22576232 tcgtgacccagattcgaacccggaacctcacagttatgtgtgagtttgatttcattgtattaccacttcttctaag 22576307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 7487393 - 7487278
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||  ||| |||||||| || ||||| ||||| |||||||||| |    ||||||||||    
T  7487393 agtctagaagtcctagatcaaccggcaaatgtcgaaattacaagatcgggcgtcgtgagccaggttcaaacccagaacctcacaat----tgtgagttta 7487298  T
Q  194 ttttcggtggattaccactt 213  Q
     |||| |||| |||||||||    
T  7487297 atttcagtggcttaccactt 7487278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 10226620 - 10226540
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctca 175  Q
    ||||||||||||||| ||||||| ||||| | |||||| ||| || |||| ||||||| ||||||||||||||| ||||||    
T  10226620 gtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 10226540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 584880 - 584786
Alignment:
Q  126 cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||| |||||||||||||||| ||||||  ||| |||||||| || | |||||||||  |||| | ||||| ||||||||| ||||    
T  584880 cgaaattgcaaggc-ggacgtcgtgacccggattcgaattcgggacctcacaattttatgtgagtttgatttcagaggattgccacttcatataag 584786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 28592181 - 28592130
Alignment:
Q  170 acctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||||||||||||||||||||||  |||||||||| || |||||||    
T  28592181 acctcacagttgtgtgtgagtttattttcaatggattaccaatttatctaag 28592130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 4610953 - 4610863
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtg 185  Q
    ||||||||||| |||| | ||||   |||||| ||||||||| |||| ||| || ||||||||||||||||| || ||||||||||||||||    
T  4610953 agtctagaagttctagcttaactagaaaatgctgaaattgca-ggccagacatcatgacccgggttcgaacctgggacctcacagttgtgtg 4610863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 7014380 - 7014313
Alignment:
Q  153 ccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaa 220  Q
    |||| |||||||||| ||||||| | || | |||||||||| |||| ||| |||||||||||||||||    
T  7014380 ccggattcgaacccgaaacctcataattttatgtgagtttaatttcagtgtattaccacttcatctaa 7014313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 32354028 - 32353943
Alignment:
Q  135 aaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||| ||||||| ||||| ||| |||||||  ||| | ||||||||||||||||||||||||||  | |||||||| || |||||||    
T  32354028 aaggtcggacgttgtgactcggattcgaactggga-cttcacagttgtgtgtgagtttattttcaattgattaccattttatctaag 32353943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 7197930 - 7197849
Alignment:
Q  100 agaagtcctagatcaactgacaaatgcgaaa-ttgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagtt 180  Q
    ||||||||||| |||| |||||||||| ||| ||| || |  ||||||| ||||||| |||||||||||| |||| ||||||    
T  7197930 agaagtcctagctcaattgacaaatgccaaaattgtaaagttggacgtcttgacccgagttcgaacccgggaccttacagtt 7197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 91; Significance: 9e-44; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 14079 - 13953
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||    
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 13980  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  13979 tttcagtggattaccacttcatctaag 13953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 19759 - 19633
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 194  Q
    ||||||||||||||| ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||    
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 19660  T
Q  195 tttcggtggattaccacttcatctaag 221  Q
    |||| ||||||||||||||||||||||    
T  19659 tttcagtggattaccacttcatctaag 19633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 22174 - 22289
Alignment:
Q  107 ctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcggtggat 205  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||| ||||||    
T  22174 ctagctcaactgacaaatgccgaaattgtaaggccggacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggat 22273  T
Q  206 taccacttcatctaag 221  Q
    ||||||||||||||||    
T  22274 taccacttcatctaag 22289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 114251 - 114378
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 193  Q
    |||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  114251 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagttta 114350  T
Q  194 ttttcggtggattaccacttcatctaag 221  Q
     |||| |||| |||||||||||||||||    
T  114351 gtttcagtggtttaccacttcatctaag 114378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 34816 - 34945
Alignment:
Q  94 gagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgag-tt 191  Q
    ||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||  ||||||||| || | ||||| ||||||| |||||| ||    
T  34816 gagtccagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagttt 34915  T
Q  192 tattttcggtggattaccacttcatctaag 221  Q
    || |||| ||||||||||||||||||||||    
T  34916 taatttcagtggattaccacttcatctaag 34945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 14494 - 14631
Alignment:
Q  95 agtctagaagtcctagatcaactgacaaatg-cgaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacag----------ttgtg 183  Q
    |||||| |||||||||  || |||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||           ||||    
T  14494 agtctataagtcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagagtcacagatgtgtg 14593  T
Q  184 tgtgagtttattttcggtggattaccacttcatctaag 221  Q
    |||||||||| |||| |||||||||||||| |||||||    
T  14594 tgtgagtttaatttcagtggattaccacttaatctaag 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 14726 - 14784
Alignment:
Q  154 cgggttcgaacccggaacctcacagttgtgtg--tgagtttattttcggtggattacca 210  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||| ||| |||||||    
T  14726 cgggttcgaacccggaacctcacaattgtgtgtctgagtttaatttcagtgaattacca 14784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 9074 - 8945
Alignment:
Q  93 agagtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctcacagttgtgtgtgagtt 191  Q
    ||||||||||||| |||| |||||||  |||||| ||||||| ||||| ||||||  |||  ||||||||||||  | ||||||||||||||||||||||    
T  9074 agagtctagaagttctagctcaactggtaaatgccgaaattgtaaggcgggacgttatgattcgggttcgaacctaggacctcacagttgtgtgtgagtt 8975  T
Q  192 tattttcggtggattaccacttcatctaag 221  Q
    || |||| |||  |||||||||||||||||    
T  8974 taatttcagtgatttaccacttcatctaag 8945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 3339 - 3259
Alignment:
Q  96 gtctagaagtcctagatcaactgacaaatgc-gaaattgcaaggccggacgtcgtgacccgggttcgaacccggaacctca 175  Q
    ||||||||||||||| ||||||| ||||| | |||||| ||| || |||| ||||||| ||||||||||||||| ||||||    
T  3339 gtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University