View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5360-Insertion-5 (Length: 800)

Name: NF5360-Insertion-5
Description: NF5360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5360-Insertion-5
NF5360-Insertion-5
[»] chr5 (77 HSPs)
chr5 (325-688)||(43362519-43362883)
chr5 (60-325)||(16407641-16407906)
chr5 (8-325)||(24136151-24136484)
chr5 (60-325)||(16409077-16409342)
chr5 (66-326)||(29719964-29720225)
chr5 (106-325)||(26177466-26177685)
chr5 (106-326)||(26170356-26170576)
chr5 (106-325)||(18442014-18442233)
chr5 (144-325)||(9789628-9789809)
chr5 (146-325)||(29722152-29722332)
chr5 (202-325)||(15465002-15465125)
chr5 (160-326)||(9352806-9352972)
chr5 (130-316)||(27450216-27450401)
chr5 (139-316)||(30631763-30631940)
chr5 (8-244)||(38219700-38219949)
chr5 (130-316)||(27445373-27445558)
chr5 (8-195)||(35387964-35388169)
chr5 (202-325)||(36931843-36931966)
chr5 (130-316)||(1456646-1456831)
chr5 (65-325)||(22536596-22536852)
chr5 (130-316)||(43599124-43599310)
chr5 (130-316)||(43604616-43604802)
chr5 (130-316)||(43610108-43610294)
chr5 (146-316)||(29402558-29402728)
chr5 (139-316)||(15045095-15045271)
chr5 (103-325)||(40379678-40379897)
chr5 (202-325)||(29752267-29752390)
chr5 (103-325)||(16546216-16546435)
chr5 (103-325)||(40381889-40382108)
chr5 (202-325)||(29751601-29751724)
chr5 (144-325)||(10592844-10593023)
chr5 (103-325)||(16543994-16544213)
chr5 (103-317)||(25077713-25077925)
chr5 (103-317)||(25135682-25135894)
chr5 (130-241)||(43592679-43592789)
chr5 (139-316)||(28807084-28807261)
chr5 (144-318)||(37556131-37556305)
chr5 (104-195)||(29751526-29751615)
chr5 (130-262)||(31180656-31180787)
chr5 (144-318)||(37560953-37561127)
chr5 (139-325)||(2785777-2785963)
chr5 (170-317)||(11916452-11916599)
chr5 (139-325)||(33768586-33768772)
chr5 (139-325)||(33791718-33791904)
chr5 (754-800)||(43360414-43360460)
chr5 (274-325)||(35388195-35388246)
chr5 (8-119)||(31180518-31180626)
chr5 (48-119)||(9789515-9789584)
chr5 (48-119)||(18441939-18442008)
chr5 (60-117)||(26170584-26170641)
chr5 (275-316)||(31180781-31180822)
chr5 (275-316)||(43592805-43592846)
chr5 (48-119)||(29722332-29722401)
chr5 (177-229)||(42426678-42426730)
chr5 (60-119)||(26177691-26177750)
chr5 (275-325)||(14520804-14520854)
chr5 (213-246)||(35388166-35388199)
chr5 (179-255)||(28751027-28751103)
chr5 (139-325)||(31396489-31396675)
chr5 (68-119)||(43599043-43599095)
chr5 (68-119)||(43604535-43604587)
chr5 (68-119)||(43610027-43610079)
chr5 (60-119)||(15464875-15464934)
chr5 (7-38)||(28832554-28832585)
chr5 (60-119)||(36932046-36932105)
chr5 (178-229)||(42428862-42428913)
chr5 (281-316)||(43625605-43625640)
chr5 (178-232)||(213014-213068)
chr5 (65-119)||(10593066-10593120)
chr5 (202-260)||(19806069-19806127)
chr5 (177-230)||(5057503-5057556)
chr5 (7-36)||(9353103-9353132)
chr5 (67-119)||(27445291-27445344)
chr5 (67-119)||(27450134-27450187)
chr5 (48-119)||(29751451-29751521)
chr5 (139-216)||(31401455-31401532)
chr5 (67-119)||(43592597-43592650)
[»] scaffold0188 (2 HSPs)
scaffold0188 (8-325)||(17431-17747)
scaffold0188 (8-62)||(23786-23840)
[»] chr1 (42 HSPs)
chr1 (8-325)||(19360912-19361228)
chr1 (60-325)||(51764990-51765255)
chr1 (8-326)||(19365767-19366103)
chr1 (8-325)||(24202251-24202564)
chr1 (130-325)||(20622626-20622821)
chr1 (105-325)||(9986785-9987005)
chr1 (105-325)||(40281958-40282179)
chr1 (105-325)||(21053540-21053760)
chr1 (160-325)||(13604095-13604260)
chr1 (139-317)||(41391001-41391178)
chr1 (139-316)||(39445897-39446074)
chr1 (144-325)||(9036003-9036183)
chr1 (8-242)||(24786907-24787156)
chr1 (130-262)||(24793709-24793841)
chr1 (103-325)||(44203218-44203437)
chr1 (8-118)||(19358530-19358639)
chr1 (170-316)||(26644382-26644528)
chr1 (139-316)||(44023385-44023562)
chr1 (139-316)||(1054522-1054699)
chr1 (139-316)||(25439407-25439584)
chr1 (139-262)||(41398656-41398778)
chr1 (139-316)||(25444600-25444777)
chr1 (178-260)||(31658880-31658962)
chr1 (178-262)||(20762310-20762395)
chr1 (275-316)||(24793674-24793715)
chr1 (139-216)||(43988057-43988134)
chr1 (177-229)||(28220670-28220722)
chr1 (177-229)||(28223865-28223917)
chr1 (275-318)||(21536119-21536162)
chr1 (275-325)||(3282281-3282331)
chr1 (275-317)||(41398772-41398814)
chr1 (275-316)||(13598975-13599016)
chr1 (193-229)||(3156540-3156576)
chr1 (7-38)||(9476559-9476590)
chr1 (177-260)||(11348143-11348226)
chr1 (7-38)||(27104171-27104202)
chr1 (275-326)||(37070342-37070393)
chr1 (7-38)||(47098594-47098625)
chr1 (7-38)||(47102608-47102639)
chr1 (178-236)||(49918015-49918073)
chr1 (7-36)||(37070064-37070093)
chr1 (170-215)||(37070237-37070282)
[»] chr7 (61 HSPs)
chr7 (8-326)||(21646308-21646644)
chr7 (60-325)||(48408398-48408663)
chr7 (65-326)||(43504461-43504722)
chr7 (105-326)||(39730932-39731153)
chr7 (8-316)||(21640110-21640415)
chr7 (8-325)||(18413940-18414275)
chr7 (8-325)||(18409064-18409399)
chr7 (130-328)||(24789423-24789621)
chr7 (8-316)||(20357036-20357339)
chr7 (106-325)||(25767327-25767540)
chr7 (8-316)||(2058273-2058596)
chr7 (8-281)||(1532947-1533236)
chr7 (65-325)||(32060631-32060888)
chr7 (160-327)||(2479795-2479962)
chr7 (130-316)||(12406664-12406849)
chr7 (144-333)||(4873541-4873729)
chr7 (160-325)||(47264102-47264267)
chr7 (65-325)||(20343500-20343756)
chr7 (103-325)||(6592702-6592921)
chr7 (103-325)||(6594918-6595137)
chr7 (103-325)||(18392561-18392780)
chr7 (139-313)||(24023830-24024004)
chr7 (139-318)||(21811745-21811924)
chr7 (170-325)||(21983712-21983867)
chr7 (209-330)||(44847614-44847735)
chr7 (144-316)||(31109078-31109251)
chr7 (103-325)||(1562368-1562587)
chr7 (170-325)||(21989377-21989531)
chr7 (251-325)||(1532884-1532958)
chr7 (103-226)||(18389125-18389246)
chr7 (130-316)||(12397312-12397484)
chr7 (139-216)||(24260929-24261006)
chr7 (65-119)||(1562310-1562364)
chr7 (178-267)||(2361602-2361691)
chr7 (178-262)||(4178413-4178498)
chr7 (139-216)||(24265785-24265862)
chr7 (60-119)||(39731177-39731236)
chr7 (177-288)||(23554653-23554764)
chr7 (40-119)||(24789649-24789727)
chr7 (50-119)||(25767253-25767321)
chr7 (7-42)||(46516070-46516105)
chr7 (65-119)||(6592644-6592698)
chr7 (65-119)||(6594860-6594914)
chr7 (139-312)||(16880475-16880648)
chr7 (139-312)||(16885330-16885503)
chr7 (65-119)||(18389067-18389121)
chr7 (65-119)||(18392503-18392557)
chr7 (177-229)||(4538994-4539046)
chr7 (177-229)||(47674386-47674438)
chr7 (177-229)||(47676579-47676631)
chr7 (168-232)||(49092159-49092223)
chr7 (177-236)||(6360573-6360632)
chr7 (176-262)||(32358496-32358582)
chr7 (177-260)||(48599939-48600022)
chr7 (175-229)||(4796238-4796292)
chr7 (8-54)||(4873379-4873424)
chr7 (7-36)||(79685-79714)
chr7 (275-316)||(79963-80004)
chr7 (202-255)||(2761749-2761802)
chr7 (7-36)||(23402784-23402813)
chr7 (7-36)||(49091986-49092015)
[»] chr8 (52 HSPs)
chr8 (8-325)||(1261414-1261749)
chr8 (8-316)||(33037295-33037600)
chr8 (11-325)||(26288195-26288517)
chr8 (11-325)||(26301452-26301774)
chr8 (11-325)||(26313446-26313768)
chr8 (146-327)||(2627316-2627497)
chr8 (7-316)||(4759542-4759867)
chr8 (8-316)||(18852635-18852959)
chr8 (12-316)||(36979685-36980006)
chr8 (8-316)||(18870029-18870353)
chr8 (130-316)||(30656088-30656274)
chr8 (139-316)||(10683747-10683924)
chr8 (102-316)||(6311716-6311927)
chr8 (144-325)||(3439088-3439267)
chr8 (160-325)||(7412787-7412952)
chr8 (202-325)||(31042908-31043031)
chr8 (65-326)||(15290142-15290401)
chr8 (65-326)||(15470511-15470770)
chr8 (131-312)||(7289439-7289620)
chr8 (130-316)||(25327672-25327857)
chr8 (103-325)||(42575689-42575909)
chr8 (139-316)||(39784333-39784510)
chr8 (102-262)||(10688661-10688818)
chr8 (131-262)||(25689604-25689734)
chr8 (8-119)||(30655951-30656060)
chr8 (8-100)||(10688841-10688932)
chr8 (8-119)||(7289651-7289760)
chr8 (40-119)||(25689764-25689841)
chr8 (139-325)||(35745793-35745979)
chr8 (178-288)||(1746663-1746773)
chr8 (60-119)||(31043131-31043190)
chr8 (177-262)||(43036062-43036148)
chr8 (275-316)||(10688626-10688667)
chr8 (178-262)||(19945784-19945869)
chr8 (178-262)||(31217895-31217980)
chr8 (177-260)||(42435652-42435736)
chr8 (65-120)||(42575631-42575686)
chr8 (168-316)||(5701960-5702109)
chr8 (8-100)||(6311603-6311693)
chr8 (176-268)||(22975950-22976042)
chr8 (178-262)||(34256949-34257033)
chr8 (48-119)||(2627543-2627612)
chr8 (177-229)||(15212459-15212511)
chr8 (106-178)||(31043034-31043106)
chr8 (275-317)||(4456583-4456625)
chr8 (177-239)||(4733488-4733550)
chr8 (179-217)||(7289629-7289667)
chr8 (7-36)||(4456325-4456354)
chr8 (7-36)||(5702251-5702280)
chr8 (7-36)||(7412637-7412666)
chr8 (168-225)||(19175305-19175362)
chr8 (7-36)||(23799347-23799376)
[»] scaffold0491 (3 HSPs)
scaffold0491 (60-325)||(9044-9308)
scaffold0491 (105-325)||(11534-11753)
scaffold0491 (60-119)||(11470-11529)
[»] chr6 (56 HSPs)
chr6 (8-325)||(5674229-5674562)
chr6 (65-325)||(2171844-2172104)
chr6 (106-326)||(22709426-22709646)
chr6 (129-325)||(3073147-3073343)
chr6 (108-325)||(411685-411903)
chr6 (65-325)||(6097747-6097986)
chr6 (130-316)||(11857374-11857559)
chr6 (157-316)||(30125026-30125185)
chr6 (69-262)||(5266418-5266610)
chr6 (130-316)||(14741934-14742119)
chr6 (130-316)||(22010197-22010382)
chr6 (144-325)||(16578921-16579101)
chr6 (144-325)||(16616279-16616459)
chr6 (65-325)||(27647467-27647724)
chr6 (103-327)||(25420795-25421016)
chr6 (202-325)||(26253589-26253712)
chr6 (160-325)||(23896792-23896957)
chr6 (103-317)||(34166673-34166886)
chr6 (144-325)||(16554454-16554634)
chr6 (144-325)||(16631010-16631190)
chr6 (103-317)||(13150856-13151069)
chr6 (103-325)||(6136328-6136547)
chr6 (160-325)||(5756951-5757116)
chr6 (103-325)||(33342468-33342688)
chr6 (103-317)||(34164451-34164664)
chr6 (139-316)||(6438898-6439075)
chr6 (130-262)||(14737128-14737259)
chr6 (144-262)||(16652759-16652877)
chr6 (103-325)||(6026834-6027053)
chr6 (128-325)||(16839135-16839331)
chr6 (139-262)||(28155133-28155256)
chr6 (139-325)||(33329932-33330118)
chr6 (139-216)||(5343879-5343956)
chr6 (139-325)||(33335429-33335615)
chr6 (103-217)||(25420999-25421110)
chr6 (8-95)||(22709308-22709396)
chr6 (139-216)||(6005821-6005898)
chr6 (171-316)||(5016977-5017121)
chr6 (65-119)||(3073064-3073118)
chr6 (168-316)||(31085954-31086101)
chr6 (177-262)||(3809367-3809452)
chr6 (275-316)||(5266604-5266645)
chr6 (275-316)||(14737093-14737134)
chr6 (65-120)||(33342410-33342465)
chr6 (65-119)||(411911-411965)
chr6 (65-119)||(6027057-6027111)
chr6 (65-119)||(25421114-25421168)
chr6 (275-316)||(28155098-28155139)
chr6 (250-316)||(5343990-5344056)
chr6 (65-119)||(6136271-6136324)
chr6 (178-260)||(10076729-10076811)
chr6 (178-262)||(5407353-5407437)
chr6 (178-262)||(5411678-5411762)
chr6 (7-36)||(5757249-5757278)
chr6 (7-36)||(10076962-10076991)
chr6 (7-36)||(23896649-23896678)
[»] chr2 (40 HSPs)
chr2 (8-325)||(25409931-25410266)
chr2 (106-325)||(32289148-32289367)
chr2 (106-325)||(30832921-30833140)
chr2 (106-325)||(3492158-3492377)
chr2 (104-325)||(40739236-40739457)
chr2 (105-325)||(4484703-4484923)
chr2 (8-316)||(9295870-9296194)
chr2 (146-325)||(6266274-6266453)
chr2 (8-316)||(14291793-14292117)
chr2 (105-316)||(11098395-11098604)
chr2 (103-325)||(12647748-12647967)
chr2 (144-316)||(39811485-39811657)
chr2 (160-262)||(28258713-28258815)
chr2 (248-316)||(44310479-44310547)
chr2 (233-316)||(32247262-32247344)
chr2 (168-316)||(33528106-33528253)
chr2 (8-100)||(11098628-11098719)
chr2 (139-325)||(19349682-19349868)
chr2 (65-119)||(4484644-4484698)
chr2 (139-325)||(19344824-19345010)
chr2 (49-119)||(6266499-6266567)
chr2 (48-119)||(40739161-40739232)
chr2 (168-230)||(34389318-34389380)
chr2 (65-119)||(12647690-12647744)
chr2 (176-229)||(2837286-2837339)
chr2 (8-41)||(3492052-3492085)
chr2 (275-316)||(8389632-8389673)
chr2 (275-316)||(20522796-20522837)
chr2 (168-316)||(10706734-10706882)
chr2 (7-38)||(14698778-14698809)
chr2 (177-290)||(29867491-29867604)
chr2 (7-38)||(33118432-33118463)
chr2 (170-225)||(39483346-39483401)
chr2 (168-213)||(8389732-8389777)
chr2 (275-316)||(21630519-21630560)
chr2 (7-36)||(28258948-28258977)
chr2 (7-36)||(33528395-33528424)
chr2 (275-316)||(36757426-36757467)
chr2 (177-214)||(39284585-39284622)
chr2 (275-316)||(39483451-39483492)
[»] chr4 (57 HSPs)
chr4 (106-328)||(28467974-28468196)
chr4 (105-325)||(13992659-13992879)
chr4 (127-325)||(31495704-31495902)
chr4 (8-316)||(24742245-24742569)
chr4 (8-262)||(29760946-29761196)
chr4 (130-316)||(9223907-9224092)
chr4 (130-316)||(9228694-9228879)
chr4 (105-316)||(56141519-56141728)
chr4 (144-316)||(51520870-51521042)
chr4 (202-325)||(31985127-31985250)
chr4 (139-316)||(5733061-5733239)
chr4 (103-317)||(7122274-7122486)
chr4 (144-317)||(7124496-7124669)
chr4 (139-316)||(45347325-45347502)
chr4 (130-285)||(18712294-18712448)
chr4 (144-325)||(8392982-8393162)
chr4 (144-325)||(8395191-8395371)
chr4 (139-316)||(18856124-18856301)
chr4 (139-316)||(3814421-3814597)
chr4 (103-325)||(5135649-5135869)
chr4 (103-325)||(5137875-5138095)
chr4 (8-119)||(28468220-28468333)
chr4 (171-325)||(5148148-5148302)
chr4 (163-316)||(16628354-16628506)
chr4 (249-316)||(18860446-18860513)
chr4 (139-261)||(45356861-45356983)
chr4 (166-316)||(3778014-3778164)
chr4 (178-316)||(6742897-6743035)
chr4 (170-262)||(5143730-5143823)
chr4 (177-260)||(46570187-46570270)
chr4 (65-119)||(13992600-13992654)
chr4 (168-216)||(8689078-8689126)
chr4 (48-119)||(31495608-31495677)
chr4 (177-260)||(2209144-2209227)
chr4 (177-260)||(26176067-26176150)
chr4 (168-231)||(38152003-38152066)
chr4 (177-232)||(54882492-54882547)
chr4 (275-325)||(5143817-5143867)
chr4 (275-313)||(29761190-29761228)
chr4 (275-316)||(5268700-5268741)
chr4 (178-262)||(5370520-5370605)
chr4 (275-316)||(8689045-8689086)
chr4 (275-316)||(38151919-38151960)
chr4 (177-260)||(6655379-6655463)
chr4 (170-225)||(5268772-5268827)
chr4 (60-119)||(31985331-31985390)
chr4 (168-316)||(16622775-16622922)
chr4 (179-217)||(56141713-56141751)
chr4 (7-36)||(3777846-3777875)
chr4 (7-36)||(5268971-5269000)
chr4 (7-36)||(5396442-5396471)
chr4 (176-229)||(5429353-5429406)
chr4 (7-36)||(6743186-6743215)
chr4 (7-36)||(10047678-10047707)
chr4 (275-316)||(10047940-10047981)
chr4 (7-36)||(16623064-16623093)
chr4 (7-36)||(54867476-54867505)
[»] chr3 (99 HSPs)
chr3 (60-325)||(26928080-26928345)
chr3 (104-325)||(23198309-23198530)
chr3 (104-325)||(23200508-23200729)
chr3 (106-325)||(1306385-1306604)
chr3 (8-268)||(2671121-2671378)
chr3 (8-316)||(8477669-8477994)
chr3 (160-326)||(33386136-33386302)
chr3 (8-316)||(40372264-40372588)
chr3 (146-325)||(800685-800864)
chr3 (160-325)||(37726134-37726299)
chr3 (160-326)||(27453416-27453582)
chr3 (130-316)||(7167688-7167874)
chr3 (130-316)||(28503327-28503512)
chr3 (139-316)||(22172670-22172847)
chr3 (8-242)||(9090843-9091093)
chr3 (202-325)||(7782589-7782712)
chr3 (104-262)||(32143726-32143884)
chr3 (8-242)||(8738605-8738855)
chr3 (144-328)||(54634707-54634890)
chr3 (139-316)||(18656843-18657021)
chr3 (104-313)||(27352092-27352299)
chr3 (130-316)||(28501160-28501345)
chr3 (144-325)||(6716085-6716265)
chr3 (160-325)||(37408036-37408200)
chr3 (65-326)||(10208777-10209036)
chr3 (103-317)||(10058034-10058247)
chr3 (103-317)||(10060256-10060469)
chr3 (103-317)||(10062478-10062691)
chr3 (103-317)||(10064700-10064913)
chr3 (103-325)||(3617034-3617253)
chr3 (103-326)||(4601108-4601329)
chr3 (160-262)||(27986001-27986103)
chr3 (103-325)||(4598887-4599107)
chr3 (103-317)||(10055812-10056025)
chr3 (103-317)||(10066922-10067135)
chr3 (103-325)||(25637013-25637232)
chr3 (8-119)||(1306250-1306360)
chr3 (144-262)||(6718331-6718449)
chr3 (103-325)||(10210978-10211198)
chr3 (144-262)||(45282628-45282746)
chr3 (139-318)||(2672425-2672604)
chr3 (162-262)||(27974477-27974577)
chr3 (8-119)||(28503542-28503655)
chr3 (168-316)||(21711669-21711817)
chr3 (8-119)||(28501375-28501488)
chr3 (139-318)||(2676581-2676760)
chr3 (105-195)||(7782513-7782603)
chr3 (138-216)||(32475885-32475963)
chr3 (138-216)||(32480743-32480821)
chr3 (168-316)||(36029561-36029708)
chr3 (8-100)||(7167550-7167641)
chr3 (168-316)||(30709267-30709414)
chr3 (275-325)||(32143878-32143928)
chr3 (139-216)||(8512642-8512719)
chr3 (139-216)||(8517522-8517599)
chr3 (168-312)||(27027174-27027318)
chr3 (170-312)||(40734087-40734228)
chr3 (168-232)||(40735097-40735161)
chr3 (60-119)||(23198246-23198305)
chr3 (275-326)||(27974432-27974483)
chr3 (65-119)||(7782454-7782508)
chr3 (178-262)||(5258589-5258674)
chr3 (275-316)||(8738550-8738591)
chr3 (275-316)||(9090788-9090829)
chr3 (139-216)||(24968519-24968596)
chr3 (168-232)||(8370044-8370108)
chr3 (172-232)||(16264820-16264880)
chr3 (170-325)||(27038511-27038666)
chr3 (177-260)||(49200112-49200196)
chr3 (65-119)||(4598829-4598883)
chr3 (65-119)||(4601050-4601104)
chr3 (275-316)||(1730917-1730958)
chr3 (210-316)||(24694656-24694764)
chr3 (168-325)||(39032017-39032174)
chr3 (168-232)||(47923457-47923521)
chr3 (177-229)||(51398499-51398551)
chr3 (177-232)||(6096261-6096316)
chr3 (7-38)||(6794473-6794504)
chr3 (60-119)||(23200445-23200504)
chr3 (60-119)||(27453298-27453357)
chr3 (178-229)||(29812736-29812787)
chr3 (60-119)||(32143663-32143722)
chr3 (170-316)||(35925960-35926105)
chr3 (7-38)||(37466592-37466623)
chr3 (50-119)||(800910-800977)
chr3 (177-215)||(36018331-36018369)
chr3 (275-329)||(40845229-40845283)
chr3 (65-119)||(54634933-54634986)
chr3 (7-36)||(1736064-1736093)
chr3 (178-215)||(3393293-3393330)
chr3 (7-36)||(8370249-8370278)
chr3 (275-316)||(16264904-16264945)
chr3 (7-36)||(27974712-27974741)
chr3 (188-217)||(28503520-28503549)
chr3 (7-36)||(39032315-39032344)
chr3 (275-316)||(40592253-40592294)
chr3 (7-36)||(40592542-40592571)
chr3 (178-262)||(45094803-45094887)
chr3 (7-36)||(47923664-47923693)
[»] scaffold0286 (2 HSPs)
scaffold0286 (65-325)||(21939-22199)
scaffold0286 (177-260)||(10981-11065)
[»] scaffold1519 (2 HSPs)
scaffold1519 (104-288)||(519-703)
scaffold1519 (21-102)||(724-806)
[»] scaffold0140 (1 HSPs)
scaffold0140 (202-326)||(7910-8034)
[»] scaffold0006 (3 HSPs)
scaffold0006 (160-325)||(132752-132917)
scaffold0006 (275-316)||(6260-6301)
scaffold0006 (279-316)||(3072-3109)
[»] scaffold0355 (1 HSPs)
scaffold0355 (139-316)||(3345-3522)
[»] scaffold0565 (2 HSPs)
scaffold0565 (103-327)||(2966-3187)
scaffold0565 (65-119)||(2908-2962)
[»] scaffold0135 (1 HSPs)
scaffold0135 (130-316)||(34562-34747)
[»] scaffold0087 (5 HSPs)
scaffold0087 (160-318)||(43441-43599)
scaffold0087 (168-254)||(36376-36462)
scaffold0087 (272-325)||(36324-36377)
scaffold0087 (7-36)||(36603-36632)
scaffold0087 (7-36)||(43732-43761)
[»] scaffold0510 (1 HSPs)
scaffold0510 (160-325)||(1083-1248)
[»] scaffold0674 (2 HSPs)
scaffold0674 (103-325)||(4091-4310)
scaffold0674 (65-119)||(4033-4087)
[»] scaffold0464 (1 HSPs)
scaffold0464 (139-316)||(760-937)
[»] scaffold0137 (1 HSPs)
scaffold0137 (103-325)||(5859-6079)
[»] scaffold0665 (2 HSPs)
scaffold0665 (130-262)||(8099-8230)
scaffold0665 (275-316)||(8224-8265)
[»] scaffold0098 (3 HSPs)
scaffold0098 (168-262)||(45666-45760)
scaffold0098 (275-325)||(45754-45804)
scaffold0098 (7-36)||(45496-45525)
[»] scaffold1455 (1 HSPs)
scaffold1455 (249-316)||(1717-1784)
[»] scaffold0197 (2 HSPs)
scaffold0197 (139-216)||(13892-13969)
scaffold0197 (138-216)||(18772-18850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (139-216)||(176558-176635)
[»] scaffold0259 (1 HSPs)
scaffold0259 (128-216)||(1847-1934)
[»] scaffold0028 (1 HSPs)
scaffold0028 (128-216)||(148552-148639)
[»] scaffold0066 (1 HSPs)
scaffold0066 (177-260)||(20858-20942)
[»] scaffold0466 (1 HSPs)
scaffold0466 (202-282)||(6750-6830)
[»] scaffold0002 (1 HSPs)
scaffold0002 (178-215)||(434218-434255)


Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-165; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 325 - 688
Target Start/End: Complemental strand, 43362883 - 43362519
Alignment:
Q  325 acttttgaagttaggaacattagttttcttggccccaaacccaaacaatgaaagtgcaatccttagcaccagatattgtttccactttttctatgcttct 424  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43362883 acttttgaagttaggaacattagttttctaggccccaaacccaaacaatgaaagtgtaatccttagcaccagatattgtttccactttttctatgcttct 43362784  T
Q  425 ctcattgctcannnnnnnagttgacactgctgtacaaagcgttacatgctgtatcataaatcaaaaagtggcaactgacttgtannnnnnnattcttctc 524  Q
    |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||    
T  43362783 ctcattgctcatttttttagttgacactgctgtacaaagcgttacatgctgtatcataaatcaaaaagtggcaactgacttctatttttttattcttctc 43362684  T
Q  525 ctgatcccctatttggaatcaagattaagtttgataaatataaaaggaatcaagactaa-gaagttaaaaatggtatatctgaatacactttgctaaatg 623  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43362683 ctgatcccctatttgtaatcaagattaagtttgataaatataaaaggaatcaagactaaggaagttaaaaatggtatatctgaatacactttgctaaatg 43362584  T
Q  624 agatgttttataatatgcttttagaggaagttactaaaagaattaacaatattttaatacagttg 688  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43362583 agatgttttataatatgcttttagaggaagttactaaaagaattaacaatattttagtacagttg 43362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 60 - 325
Target Start/End: Complemental strand, 16407906 - 16407641
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 159  Q
    |||| ||||||||||| || |||||||||||| ||| |||||| ||||||||||||||| || | |||||||||||||| |||  |||||||||| |||     
T  16407906 aaaatctgcacaagaatacttaaatactagccctccactgataaaatcgtgtcacgattggagcgtacgtcccaaggtacgaccggtccttatcatggaa 16407807  T
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16407806 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 16407707  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16407706 gatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 24136151 - 24136484
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataa-atactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||  ||||||||||||| | | |||||||| |||||||||||||||    
T  24136151 cctcctttgtaatccaagtttctctctcttagctcttccaagctctactccaaaaa--tgcacaagaacactttatatactagctttcctctgatacaat 24136248  T
Q  107 cgtgtcacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||                 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24136249 cgtgccacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtca 24136348  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| || ||||||||||| |||    
T  24136349 cgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgt 24136448  T
Q  290 tcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||| ||||||||||||||| |||||| ||||||    
T  24136449 tcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 60 - 325
Target Start/End: Complemental strand, 16409342 - 16409077
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 159  Q
    |||| |||||||||||||| |||||||||||  ||| || ||| ||||||||||||||| || | |||||||||| ||| ||| ||||||||||| |||     
T  16409342 aaaatctgcacaagaacacttaaatactagctctccactaataaaatcgtgtcacgattggagcgtacgtcccaatgtacgaccagtccttatcatggaa 16409243  T
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    |||||||||||||||||| |||| ||||||||||| | |||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||    
T  16409242 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacatcacaaaatcgtgtcac 16409143  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  16409142 gatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 66 - 326
Target Start/End: Complemental strand, 29720225 - 29719964
Alignment:
Q  66 tgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaa 165  Q
    ||||||||||||| |||||||  ||||||| |||||| ||||||||||||||| |  ||| |||||||||||||||| ||||||||||| ||| ||||||    
T  29720225 tgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaa 29720126  T
Q  166 cgagcaagtttgaa-aattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    |||||||||||| | ||| ||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||| ||| |||||||||||||||||    
T  29720125 cgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgc 29720026  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    |||||| || |||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  29720025 caaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacac 29719964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 106 - 325
Target Start/End: Complemental strand, 26177685 - 26177466
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| |  | | |||||||||||| ||| ||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||| |||||    
T  26177685 tcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcg 26177586  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||    
T  26177585 tgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 26177486  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||    
T  26177485 tttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 106 - 326
Target Start/End: Complemental strand, 26170576 - 26170356
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| |  | | |||||||||||| ||| ||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||| |||||    
T  26170576 tcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcg 26170477  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||  |||| |||    
T  26170476 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaa 26170377  T
Q  306 tttgaagccaaatctcaacac 326  Q
    |||||||||||| ||||||||    
T  26170376 tttgaagccaaaactcaacac 26170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 106 - 325
Target Start/End: Original strand, 18442014 - 18442233
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| |  | | |||||||||  | ||| ||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||  ||||    
T  18442014 tcgtgtcacgattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcg 18442113  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||    
T  18442114 tgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 18442213  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||| ||||||||||||    
T  18442214 tttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 144 - 325
Target Start/End: Original strand, 9789628 - 9789809
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||| ||| |||||||||||||||||  |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9789628 agtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 9789727  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  9789728 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 146 - 325
Target Start/End: Complemental strand, 29722332 - 29722152
Alignment:
Q  146 tccttatcaaggatacttaacgagcaagtttgaa-aattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 244  Q
    ||||||||| ||| |||||||||||||||||| | ||| ||||||||||||||||  ||||||||||||||||||||| |||| || ||||||| ||| |    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  245 acaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    || ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 15465002 - 15465125
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||| | |||||    
T  15465002 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagacca 15465101  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||||||    
T  15465102 caaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 9352972 - 9352806
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 9352873  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    ||||||| | | |  ||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  9352872 gatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaacac 9352806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 27450216 - 27450401
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  27450216 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 27450314  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  27450315 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 27450401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 30631763 - 30631940
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  ||||||||||||||||||||   ||| ||||||||||||||||| ||||||||||||||||||  |||||||||  ||||||    
T  30631763 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcac 30631862  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||| | | ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  30631863 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30631940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 38219700 - 38219949
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaat- 106  Q
    |||||||||||||||||||||||||||||||||||||| || |||| ||||||||  ||||||||||||||     ||||||||||||||||||| |||     
T  38219700 cctcctttgtaatccaagtttctctctctaagctcttcaaagctcttcttcaaaat-ctgcacaagaacac-----tactagccttcctctgataaaatt 38219793  T
Q  107 ------------------cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
                      |||||||||||| |||| |||||| ||||||| ||| ||||||||||| ||| ||||||| ||||||||||||||| |||||    
T  38219794 gtgtcacgatttccaaatcgtgtcacgattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtc 38219893  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 244  Q
    || ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38219894 acaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggcatc 38219949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 27445373 - 27445558
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  27445373 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 27445471  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||  ||||||||||||||||||||    
T  27445472 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaa 27445558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 35387964 - 35388169
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgataca--- 104  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| |||||||||||||| ||||||||||||||||||||||| |       
T  35387964 cctcctttgtaatccaagtttttctctctaagctcttccaagctctc-ttccaaaatctgcacaagaacacttaaatactagccttcctctgataaaatc 35388062  T
Q  105 ----------------atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
                    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  35388063 gtgtcacgatttccagatcgtgtcacgatttgaacgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtc 35388162  T
Q  189 acgattt 195  Q
    || ||||    
T  35388163 acaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 36931966 - 36931843
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||  ||||    
T  36931966 atcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaacca 36931867  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    |||||||||||| |||||||||||    
T  36931866 caaatttgaagcgaaatctcaaca 36931843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 1456831 - 1456646
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| ||||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||| |||    
T  1456831 cccaaggta-gacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaa 1456733  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  1456732 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 65 - 325
Target Start/End: Original strand, 22536596 - 22536852
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| | | |||||||||||||||| |  |||||||||||||| ||    |||  ||||||  | ||| |||||||||||||||||||||    
T  22536596 ctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgatctgtg--taccacccaagaaacgaccagtccttatcaaggatactta 22536692  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    |||||||||||| |  || ||||||||||||||||  || ||| |||||||| ||||||||||| | ||||||||||| | | |||||||||||||||||    
T  22536693 acgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgc 22536792  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    || | | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  22536793 cacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 43599124 - 43599310
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  43599124 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43599222  T
Q  230 ccagctcacgg-catcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||| |  |   |||||||||||||| |||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  43599223 ctagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43599310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 43604616 - 43604802
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  43604616 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43604714  T
Q  230 ccagctcacgg-catcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||| |  |   |||||||||||||| |||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  43604715 ctagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43604802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 43610108 - 43610294
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  43610108 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43610206  T
Q  230 ccagctcacgg-catcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||| |  |   |||||||||||||| |||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  43610207 ctagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 29402728 - 29402558
Alignment:
Q  146 tccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 245  Q
    |||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||| |||||| |||  |     
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  246 caaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
      |||||||| |||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 29402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 15045095 - 15045271
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  ||||||||| ||||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||||||||  ||||||    
T  15045095 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 15045194  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||| | ||||||||||||||| ||||| | || |||||||||||||||||||||  || ||||||||||||||||    
T  15045195 ggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 15045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 40379897 - 40379678
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  40379897 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 40379800  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||| || ||||||||||| || ||||||||||| | |  |||||||||||||| ||||| | ||  ||||||||| |||||||||| |||||    
T  40379799 tcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagacca 40379701  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  40379700 caaatttgaagac-aatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 29752267 - 29752390
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    |||||| |||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacca 29752366  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| ||||||||||||    
T  29752367 caaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 16546435 - 16546216
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  16546435 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 16546338  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||| || ||||||||||| || ||||||||||| | |  |||||||||||||| ||||| | ||  ||||||||| ||||||||||  ||||    
T  16546337 tcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaacca 16546239  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  16546238 caaatttgaagac-aatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 40382108 - 40381889
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  40382108 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 40382011  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||| || ||||||||||| || ||||||||||| | |  |||||||||||||| ||||| | ||  ||||||||| |||||||| | |||||    
T  40382010 tcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagacca 40381912  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  40381911 caaatttgaagac-aatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 29751601 - 29751724
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||||  |||||||||||  | |||||||||| |||||||||| |||||    
T  29751601 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagacca 29751700  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| ||||||||||||    
T  29751701 caaatttgaagacaaatctcaaca 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 10593023 - 10592844
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||| ||||||||||||||||||||| |  || |||||||||||| || | |||||| |||||||| ||||||||||| | | |||||||||     
T  10593023 agtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacggca- 10592925  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | |  |||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  10592924 cccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 16544213 - 16543994
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  16544213 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 16544116  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||| || |||||||| || || ||||||| ||| | |  |||||||||||||| ||||| | ||  ||||||||| ||||||||||  ||||    
T  16544115 tcgtgtcacgaatttgcaccctgtaaccctagctcacagcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaacca 16544017  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  16544016 caaatttgaagac-aatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 25077925 - 25077713
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |    
T  25077925 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaa 25077828  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||| ||| || ||||||||||| | |  ||||| |||||||| ||||| | || |||||||||| |||||||||| |||||    
T  25077827 tcgtgacacgatttgcacccctacaaccctagctcacggcacctc-caatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagacca 25077729  T
Q  302 caaatttgaagccaaa 317  Q
    ||||||||||| ||||    
T  25077728 caaatttgaagacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 25135894 - 25135682
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |    
T  25135894 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaa 25135797  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||| ||| || ||||||||||| | |  ||||| |||||||| ||||| | || |||||||||| |||||||||| |||||    
T  25135796 tcgtgacacgatttgcacccctacaaccctagctcacggcacctc-caatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagacca 25135698  T
Q  302 caaatttgaagccaaa 317  Q
    ||||||||||| ||||    
T  25135697 caaatttgaagacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 43592679 - 43592789
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  43592679 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43592777  T
Q  230 ccagctcacggc 241  Q
    | ||||||||||    
T  43592778 ctagctcacggc 43592789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 28807261 - 28807084
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| | |||||||    || |||||||||||||||||||||||| |||||||| |||||||||||||   |||||    
T  28807261 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctca 28807162  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||| | | |||||||||||||  |||| | ||  ||||||| |||||||||||| ||||| ||||||||||||||    
T  28807161 cggcatctc-agatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaa 28807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 144 - 318
Target Start/End: Complemental strand, 37556305 - 37556131
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggca 242  Q
    |||||||||||  |||||||||| |||||||||  | || ||||||| |||||||||||||||| ||||||||| | || |  ||||  | |||||||||    
T  37556305 agtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggca 37556206  T
Q  243 tcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    || || | ||||||||||||  | || | || |||||||| |||||||||||| ||||||||||||||||||||||    
T  37556205 tctcaga-tcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37556131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 29751526 - 29751615
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgattt 195  Q
    |||||||||||||||||  | |||  ||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  29751526 aatcgtgtcacgatttg--cgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 130 - 262
Target Start/End: Original strand, 31180656 - 31180787
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  ||||||||||||| |||| |   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  31180656 cccaaggt-tgaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 31180754  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    | |||||||| || |   |||||||||||||||    
T  31180755 ctagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 144 - 318
Target Start/End: Complemental strand, 37561127 - 37560953
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggca 242  Q
    |||||||||||  |||||||||| |||||||||    || |||||||||||||||||||||||| ||||||||| | || |  ||||   ||||||||||    
T  37561127 agtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggca 37561028  T
Q  243 tcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    || | | |||||||||||||    || | || |||||||| |||||||||||| ||||||||||||||||||||||    
T  37561027 tctc-agatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 2785777 - 2785963
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   |||||    
T  2785777 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 2785876  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  2785877 cggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 11916599 - 11916452
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaa 268  Q
    ||||||||||||| |||||||| |||||||| |||||| |||||||  |||||||||||||||  ||||| || |   ||||||||| |||| ||   ||    
T  11916599 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccacactcactgcct-ggaaaatcgtgacacgttgatgaa 11916501  T
Q  269 tttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaa 317  Q
     |||| ||||||||||||||||||| |  ||||||||||||||||||||    
T  11916500 attgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 33768586 - 33768772
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   |||||    
T  33768586 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33768685  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  33768686 cggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 33791718 - 33791904
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   |||||    
T  33791718 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33791817  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  33791818 cggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 754 - 800
Target Start/End: Complemental strand, 43360460 - 43360414
Alignment:
Q  754 agagaaatgtgggtttgtttcacgagttgttgtcatcgactctatgt 800  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43360460 agagaaatgtgggtttgtttcacgagttgttgtcatcgactctatgt 43360414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 35388195 - 35388246
Alignment:
Q  274 atcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  35388195 atcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 31180518 - 31180626
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatacaat 106  Q
    |||||||||| ||||||||| |||||||||||||||||||| | |  |||||||||   |||||||||||| ||| ||||||| ||||||||||  ||||    
T  31180518 cctcctttgttatccaagtt-ctctctctaagctcttccaagccccgcttcaaaaa---gcacaagaacacaatatatactagtcttcctctgaagcaat 31180613  T
Q  107 cgtgtcacgattt 119  Q
    |||| ||||||||    
T  31180614 cgtgccacgattt 31180626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 9789515 - 9789584
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||   |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  9789515 aactctccttcaaat--ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 9789584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 18441939 - 18442008
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||   |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  18441939 aactctccttcaaat--ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 18442008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 26170641 - 26170584
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgat 117  Q
    |||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  26170641 aaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgat 26170584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 31180781 - 31180822
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  31180781 tcacgatttctctgttcttccagaccacaaatttgaagccaa 31180822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 43592805 - 43592846
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  43592805 tcacgatttctctgttcttccagaccacaaatttgaagccaa 43592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 29722401 - 29722332
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||   |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  29722401 aactctccttcaaat--ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 42426678 - 42426730
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||||||||| |||||||| |||||||||||||| | |||||||||||    
T  42426678 gaaaattgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 42426730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 26177750 - 26177691
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||| ||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  26177750 aaaatctgcgcaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 26177691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 14520804 - 14520854
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  14520804 tcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 14520854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 35388166 - 35388199
Alignment:
Q  213 atttggcaccctgcaaaccagctcacggcatcac 246  Q
    ||||||||||||||||||||||||||||||||||    
T  35388166 atttggcaccctgcaaaccagctcacggcatcac 35388199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 28751027 - 28751103
Alignment:
Q  179 aaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtg 255  Q
    ||||||||||||| |||||||| ||||||||||||||   ||||||||||| || ||| || ||| || ||||||||    
T  28751027 aaattgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgcaaaacaactctcgacattacgaaatcgtg 28751103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 325
Target Start/End: Complemental strand, 31396675 - 31396489
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  || ||||||| | ||||| |   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||  ||||||    
T  31396675 tgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctca 31396576  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | || || |   |||||||||||| ||||||| | ||  ||||||| ||||||||| ||  ||||||||||||||||||| | ||||||    
T  31396575 ctgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 31396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 43599043 - 43599095
Alignment:
Q  68 cacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  43599043 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgattt 43599095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 43604535 - 43604587
Alignment:
Q  68 cacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  43604535 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgattt 43604587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 43610027 - 43610079
Alignment:
Q  68 cacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  43610027 cacaagaacacaatatatactagccttcctctgaagcaatcgtgtcacgattt 43610079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 15464875 - 15464934
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| |||||||||| ||||  |||||| ||||||| ||||||||    
T  15464875 aaaatctgcacaagaacacttaaatactagtcttctactgataaaatcgtgccacgattt 15464934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 28832554 - 28832585
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  28832554 acctcctttgtaatccaagtttctctctctaa 28832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 36932105 - 36932046
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||||||| ||||||| || ||||  |||||| ||||||| ||||||||    
T  36932105 aaaaactgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgattt 36932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 42428862 - 42428913
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  42428862 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 42428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 316
Target Start/End: Original strand, 43625605 - 43625640
Alignment:
Q  281 tttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaa 43625640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 213068 - 213014
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    ||||| |||||||| |||||||| |||||||||||||| | | ||||||||||||    
T  213068 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaaacca 213014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 10593120 - 10593066
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| || ||||||| ||||||||| |  ||||||||||||||||    
T  10593120 ctgcacaagaacacttacatactagtcttcctctgttgaaatcgtgtcacgattt 10593066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 19806127 - 19806069
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||||||||||| ||||||||||||| |||||| || |||  |||||||||| ||||    
T  19806127 atcgtgtcacgattgggcaccctgcaaaacagctctcgacattgcaaaatcgtgacacg 19806069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 5057556 - 5057503
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 230  Q
    ||||||||||||||| ||| |||| |||||||||||||| | ||||||| ||||    
T  5057556 gaaaattgtgtcacgttttaccaaaatcgtgtcacgattggacaccctgaaaac 5057503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 9353132 - 9353103
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  9353132 acctcctttgtaatccaagtttctctctct 9353103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 27445291 - 27445344
Alignment:
Q  67 gcacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||| || ||||||||||||||||||  |||||||| ||||||||    
T  27445291 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt 27445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 27450134 - 27450187
Alignment:
Q  67 gcacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||| || ||||||||||||||||||  |||||||| ||||||||    
T  27450134 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt 27450187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 29751451 - 29751521
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataa-atactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| |  ||||||||||||| | | |||||||||||||||| |  |||||||||||||||||    
T  29751451 aactctccttcaaaga--tgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattt 29751521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 31401532 - 31401455
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  || ||||||  |||||||||   |||  ||||||||||||||||||||||| ||||||||    
T  31401532 tgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattt 31401455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 43592597 - 43592650
Alignment:
Q  67 gcacaagaacaca-taaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||| || ||||||||||||||| ||  |||||||||||||||||    
T  43592597 gcacaagaacacaatatatactagccttcctccgaagcaatcgtgtcacgattt 43592650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 17747 - 17431
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||| |||||| ||||    
T  17747 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaat-ctgcacaagaacacttaaatactagccttccactgataaaatc 17649  T
Q  108 gtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtg 207  Q
    ||||||||||| |||| |||||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17648 gtgtcacgattggaacgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtg 17549  T
Q  208 tcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatt 307  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  17548 tcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatt 17449  T
Q  308 tgaagccaaatctcaaca 325  Q
    ||||||||||||||||||    
T  17448 tgaagccaaatctcaaca 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 23840 - 23786
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23840 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaa 23786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 19361228 - 19360912
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| |||||||||| ||||| |||||| ||||    
T  19361228 cctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaat-ctgcacaagaacacttaaatactagtcttccactgataaaatc 19361130  T
Q  108 gtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtg 207  Q
    ||||||||||| | || |||||| ||||||| |||  |||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19361129 gtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtg 19361030  T
Q  208 tcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||| | |||||||||||    
T  19361029 tcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatt 19360930  T
Q  308 tgaagccaaatctcaaca 325  Q
    ||||||||||||||||||    
T  19360929 tgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 60 - 325
Target Start/End: Complemental strand, 51765255 - 51764990
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 159  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| | || |||||| ||||||||||| ||||||||||| |||     
T  51765255 aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtatgaccagtccttatcatggaa 51765156  T
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51765155 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 51765056  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||| |||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  51765055 gatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaaca 51764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 8 - 326
Target Start/End: Complemental strand, 19366103 - 19365767
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| |||||||||| ||||| |||||| ||||    
T  19366103 cctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaat-ctgcacaagaacacttaaatactagtcttccactgataaaatc 19366005  T
Q  108 gtgtcacgattt-------------------gaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
    ||||||||||||                   | || |||||| ||| ||| |||  |||||||||  ||| | ||||||||||||||||||||| |||||    
T  19366004 gtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaatgtacgacctgtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtc 19365905  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  19365904 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 19365805  T
Q  289 ttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    ||||| | |||||||||||||||| |||||||||||||    
T  19365804 ttctttcagaccacaaatttgaagtcaaatctcaacac 19365767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 24202564 - 24202251
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  || ||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  24202564 cctcctttgtaatccaagtttctctctctaagctcttccaagctctc--tccaaaatatgcacaagaacacttaaatactagccttcctctgatacaatc 24202467  T
Q  108 gtgtcacgattt-------------------gaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
    ||||||||||||                   |||| | ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||          
T  24202466 gtgtcacgatttccagatcgtgtcacgatttgaacgtgcgtcccaagatatgaccagtccttatcaaggatacttaacgagcaagtttgaaaat------ 24202373  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
                   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  24202372 ---------------cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 24202288  T
Q  289 ttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |||||||||||||||||||||||||||||    
T  24202287 ttcttccagaccacaaatttgaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 20622626 - 20622821
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||  |||||||||||||||||||||||||| |    
T  20622626 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaga 20622725  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | ||||||||||| ||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  20622726 ctagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 9987005 - 9986785
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    |||||||||||||| |  ||| |||||||||||||||| ||||||||| | ||| |||||||||||||||||| |||| ||||||||||||||||| |||    
T  9987005 atcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatc 9986906  T
Q  205 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaa 304  Q
    ||||||||||||||||| ||||| |||||||||||||| ||| ||||||||| |||||| |||||| || |||||||||| |||||||||| ||||||||    
T  9986905 gtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaa 9986806  T
Q  305 atttgaagccaaatctcaaca 325  Q
    |||||||| ||||||||||||    
T  9986805 atttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 40282179 - 40281958
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaa-aattgtgtcacgatttcccaagat 203  Q
    |||||||||||||| |  ||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||| | ||| |||||||||||| |||  ||    
T  40282179 atcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaat 40282080  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    ||||||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||| || |||||||||| || ||||||| |||||||    
T  40282079 cgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccaca 40281980  T
Q  304 aatttgaagccaaatctcaaca 325  Q
    ||||||||| ||||||||||||    
T  40281979 aatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 21053760 - 21053540
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaa-aattgtgtcacgatttcccaagat 203  Q
    |||||||||||||| |  ||| |||| ||||||||||| ||||||||||| ||| |||||||||||||||||| | ||| ||||||||||||||||  ||    
T  21053760 atcgtgtcacgattggtgcatccgtctcaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaat 21053661  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    ||||||||||||||||||| ||||  | ||||||| ||| ||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||    
T  21053660 cgtgtcacgatttggcaccttgcattctagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 21053561  T
Q  304 aatttgaagccaaatctcaaca 325  Q
    ||||||||| | ||||||||||    
T  21053560 aatttgaagac-aatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 13604260 - 13604095
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| |||||||||||||||  |||||||||| | ||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||    
T  13604260 acttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccac 13604161  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||| ||| | | || |||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  13604160 gataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 139 - 317
Target Start/End: Original strand, 41391001 - 41391178
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  ||||||||| ||||||||||   |||  ||||||||||||||||||||||| |||||||||||  |||||||||  ||||||    
T  41391001 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 41391100  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaa 317  Q
    |||||| |||| |||||||||||| ||||| | || ||||||||||||||||||||| |||||||||||||||||||||    
T  41391101 ggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 39445897 - 39446074
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctca 237  Q
    |||| |||||||||||  ||||||||||||||||||||    || |||||| ||||||||||||||||| |||||||||||  |||||||||  | ||||    
T  39445897 tgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 39445996  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||| |||| |||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  39445997 cggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39446074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 9036183 - 9036003
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||  ||| || ||| ||||| || ||||||||||| | |||||||||||     
T  9036183 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcac 9036084  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  9036083 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 24787156 - 24786907
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||| ||||||||||  ||||    
T  24787156 cctcctttgttatccaagtt-ctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagtcttcctctgaagcaat 24787060  T
Q  107 cgtgtcacgatttgaacata-------------cgtc----ccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||              ||||    ||||||| |||| |||||||||||||||||||||||||||||||||   ||| ||||||    
T  24787059 cgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtca 24786960  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggca 242  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||||||||    
T  24786959 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggca 24786907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 24793841 - 24793709
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  24793841 cccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 24793742  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    | ||||||||||| | | |||||||||||||||    
T  24793741 ctagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 44203437 - 44203218
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||||||||| || | |    
T  44203437 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaa 44203340  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||| | | || |||||||||||| ||||| | || |||||||||| |||||||||| |||||    
T  44203339 tcgtgccacgatttgcacccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagacca 44203241  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  44203240 caaatttgaagac-aatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 19358639 - 19358530
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||| |||||||||| ||||| |||||| ||||    
T  19358639 cctcctttgtaatccaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcacaagaacacttaaatactagtcttccactgataaaatc 19358541  T
Q  108 gtgtcacgatt 118  Q
    |||||||||||    
T  19358540 gtgtcacgatt 19358530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 170 - 316
Target Start/End: Complemental strand, 26644528 - 26644382
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaat 269  Q
    ||||||||||||| |||||||| |||| ||| |||||| ||||||||| |||| |||||||||||||| | ||| |||||||||||| |||||| ||||     
T  26644528 caagtttgaaaatcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaa 26644429  T
Q  270 ttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||| ||||||||||||  ||||||||||| |||||||    
T  26644428 tcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaa 26644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 44023562 - 44023385
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||| || ||||||   |||||    
T  44023562 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 44023463  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| | |  |||||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  44023462 cggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 1054699 - 1054522
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||||||||   |||||    
T  1054699 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 1054600  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| | |  |||||| ||||||| ||||| | ||  |||||||||||||||||||| ||||||||||||||||||||    
T  1054599 cggcacctc-caatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaa 1054522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 25439584 - 25439407
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||    || |||||||||||||||||||||||| |||||||| ||| |||||||||   |||||    
T  25439584 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctca 25439485  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||| | |||||||||||||||  | || | || |||||||| |||||||||||| ||||||||||||||||||||    
T  25439484 cggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 139 - 262
Target Start/End: Original strand, 41398656 - 41398778
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||| ||||||||| ||||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||||||||  ||||||    
T  41398656 tgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 41398755  T
Q  239 ggcatcacaaaatcgtgtcacgat 262  Q
    |||||| | |||||||||||||||    
T  41398756 ggcatctc-aaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 25444777 - 25444600
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctca 237  Q
    |||| |||||||||||  |||||||||| | |||||||    || |||||||||||||||||||||||| |||||||| ||| ||| |||||  | ||||    
T  25444777 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctca 25444678  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||| |||| ||||||||||||  | || | || |||||||| |||||||||||| ||||||||||||||||||||    
T  25444677 cggcatctcaaa-tcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 31658962 - 31658880
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||| || |||  |||||||||| ||||    
T  31658962 aaaattgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaaacagctctcgacattgcaaaatcgtgacacg 31658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 20762395 - 20762310
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| |||||||||||||| | | ||||| |||||||||| || ||| | |||||||||||||||||    
T  20762395 aaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 20762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 24793715 - 24793674
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  24793715 tcacgatttctctgttcttccagaccacaaatttgaagccaa 24793674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 43988134 - 43988057
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||| ||||||||||| ||||||||    
T  43988134 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattt 43988057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 28220670 - 28220722
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||| |||||||| |||||||| |||||||||||||| |||||||||||||    
T  28220670 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 28223865 - 28223917
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||| |||||||| |||||||| |||||||||||||| |||||||||||||    
T  28223865 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28223917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 21536162 - 21536119
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  21536162 tcacgatttctctgttcttccaaaccacaaatttgaagccaaat 21536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 3282281 - 3282331
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  3282281 tcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 41398772 - 41398814
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaa 317  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  41398772 tcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 13598975 - 13599016
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  13598975 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 13599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 3156576 - 3156540
Alignment:
Q  193 tttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| ||||||||||||||||||||||||||||    
T  3156576 tttcccaaaatcgtgtcacgatttggcaccctgcaaa 3156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 9476559 - 9476590
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  9476559 acctcctttgtaatccaagtttctctctctaa 9476590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 11348226 - 11348143
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| ||  |||| |||||||||||||| | ||||||||||| |||||| || |||  |||||||||| ||||    
T  11348226 gaaaatcgtgtcacgtttctccaaaatcgtgtcacgattagacaccctgcaaaacagctctcgacattgcaaaatcgtgacacg 11348143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 27104202 - 27104171
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  27104202 acctcctttgtaatccaagtttctctctctaa 27104171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 37070342 - 37070393
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    |||||||||||||||||||||  |||||||||||||| |||| | |||||||    
T  37070342 tcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaacac 37070393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 47098625 - 47098594
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  47098625 acctcctttgtaatccaagtttctctctctaa 47098594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 47102639 - 47102608
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  47102639 acctcctttgtaatccaagtttctctctctaa 47102608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 49918073 - 49918015
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctc 236  Q
    ||||| |||||||| ||| | || |||||||||||||| ||||||||||||| ||||||    
T  49918073 aaaatcgtgtcacgtttttcgaaaatcgtgtcacgattgggcaccctgcaaaacagctc 49918015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 37070064 - 37070093
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  37070064 acctcctttgtaatccaagtttctctctct 37070093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 37070237 - 37070282
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatt 215  Q
    ||||||||||||| |||||||| |||||||| |||||| |||||||    
T  37070237 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgatt 37070282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 8 - 326
Target Start/End: Original strand, 21646308 - 21646644
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |  |||||  |||||||||||||| ||||||||||||||||||||||| ||||    
T  21646308 cctcctttgtaatctaagtttctctctctaagctcttccaagctcttccccaaaat-ctgcacaagaacacttaaatactagccttcctctgataaaatc 21646406  T
Q  108 gtgtcacg-------------------atttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
    ||||||||                   |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  21646407 gtgtcacgatttccagatcgtggcacgatttgaacgtacgtcccaaggtatgaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtc 21646506  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  21646507 acgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctg 21646606  T
Q  289 ttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    |||||||  ||||||||||||||||||||| |||||||    
T  21646607 ttcttccaaaccacaaatttgaagccaaatgtcaacac 21646644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 60 - 325
Target Start/End: Complemental strand, 48408663 - 48408398
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 159  Q
    |||| |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||| | || |||||  ||||||| ||| ||||||||||   ||     
T  48408663 aaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattggtacgtacgttacaaggtacgaccagtccttatcctagaa 48408564  T
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48408563 acttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 48408464  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  48408463 gatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 48408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 65 - 326
Target Start/End: Original strand, 43504461 - 43504722
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    ||||||| |||||| |||||||||||| ||| |||||| ||||||||||||||| |  |||  ||||||||||| ||| ||||||||||| ||| |||||    
T  43504461 ctgcacaggaacacttaaatactagccctccactgataaaatcgtgtcacgattggtgcatctgtcccaaggtacgaccagtccttatcatggaaactta 43504560  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43504561 acgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgc 43504660  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    |||||| || |||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  43504661 caaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagctaaatctcaacac 43504722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 105 - 326
Target Start/End: Complemental strand, 39731153 - 39730932
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    |||||||||||||| | || |||||||||||||| ||| ||||||||||| ||| |||||||||||||||||| |||| ||||||||||| | |||||||    
T  39731153 atcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatc 39731054  T
Q  205 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaa 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  39731053 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaa 39730954  T
Q  305 atttgaagccaaatctcaacac 326  Q
    ||||||||||||||||||||||    
T  39730953 atttgaagccaaatctcaacac 39730932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 21640110 - 21640415
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||| || ||||||| || | |||||  ||||    
T  21640110 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaata--gcacaagaacacaatatatactagtctccttctgaagcaat 21640207  T
Q  107 cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgt 206  Q
    ||||||||||||||  | | ||| |||||| ||||| |||||||||||  ||||||||| ||||||||||   ||| |||||||||||||||||||||||    
T  21640208 cgtgtcacgatttg--cgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 21640305  T
Q  207 gtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaat 306  Q
    |||||||||||||  ||||||||| ||||||||||| | | ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||    
T  21640306 gtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 21640405  T
Q  307 ttgaagccaa 316  Q
    ||||||||||    
T  21640406 ttgaagccaa 21640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 18413940 - 18414275
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaat- 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| |||||||||| |||||  ||||| |||     
T  18413940 cctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaat-ctgcacaagaacacttaaatactagtcttccaatgataaaatt 18414038  T
Q  107 ------------------cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
                      |||||||||||| | || |||||| ||||||| ||| ||||||||||| ||| ||||||| ||||||||||| ||| ||||     
T  18414039 gtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtt 18414138  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||    
T  18414139 acgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctg 18414238  T
Q  289 ttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  18414239 ttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 18409064 - 18409399
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||  |||||| ||||||| |||||||||| ||||| |||||| ||||    
T  18409064 cctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaat-ctgcacgagaacacttaaatactagtcttccactgataaaatc 18409162  T
Q  108 gt-------------------gtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
    ||                   ||||||||| | || |||||| ||||||| ||| ||||||||||| ||| ||||||| ||||||||||| ||| |||||    
T  18409163 gtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtc 18409262  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | ||||||||||||    
T  18409263 acgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctg 18409362  T
Q  289 ttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| || ||||||||||||||||||||||||||    
T  18409363 ttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 130 - 328
Target Start/End: Complemental strand, 24789621 - 24789423
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  24789621 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaa 24789522  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacactt 328  Q
    | ||||||||||| ||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  24789521 ctagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacactt 24789423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 20357339 - 20357036
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    |||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||   ||||||||||||| || ||||||| ||||||||||  ||||    
T  20357339 cctcctttgttatccaagtt-ctctcactaagctctaccaagctctccttcaaaaa---gcacaagaacacaatatatactagtcttcctctgaagcaat 20357244  T
Q  107 cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgt 206  Q
    |||| |||||||||  | |  | |||||||| ||||  ||||||||||||||||||||||||||||||||   |||  ||||||||||||||||||||||    
T  20357243 cgtgccacgatttg--cgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgt 20357146  T
Q  207 gtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaat 306  Q
    | |||||||||||  ||||||||| ||||||||||| |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||    
T  20357145 gccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 20357046  T
Q  307 ttgaagccaa 316  Q
    ||||||||||    
T  20357045 ttgaagccaa 20357036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 106 - 325
Target Start/End: Original strand, 25767327 - 25767540
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| | || |||||| ||||| | |||  |||||||||   || ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  25767327 tcgtgtcacgattggtacgtacgtcacaaggcacgacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcg 25767426  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||      |||| |||||||||    
T  25767427 tgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttct------ttccagaccacaaa 25767520  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||||||||| ||||||    
T  25767521 tttgaagccaaatatcaaca 25767540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 2058273 - 2058596
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||  |||  ||||||||||||||| || ||||||||||||||||||  ||||    
T  2058273 cctcctttgtaatccaagtt-ctctctctaagctcttccaagctctcttttcaaat-ctgcacaagaacacaatatatactagccttcctctgaagcaat 2058370  T
Q  107 cgtgtcacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||                 ||  ||||||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||    
T  2058371 cgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtca 2058470  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | | ||||||||||||||||||||| | || |||||||||||||||    
T  2058471 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctc-aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgt 2058569  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  2058570 tcttccagaccacaaatttgaagccaa 2058596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 8 - 281
Target Start/End: Complemental strand, 1533236 - 1532947
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||   ||| |||||||||| ||| ||||||||||||||||||  ||||    
T  1533236 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccctcaaat--ctgtacaagaacactatatatactagccttcctctgaagcaat 1533139  T
Q  107 cgtgtcacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||                 | |||||||||||| || |||||||||||||||||||||||||| |||||| | ||| ||||||    
T  1533138 cgtgccacgatttccagatcgtgtcacgatttgtgtatgtcccaaggtataaccagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtca 1533039  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgat 281  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||| ||||||||||||||||| || |||||||    
T  1533038 cgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 65 - 325
Target Start/End: Original strand, 32060631 - 32060888
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||    
T  32060631 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatactta 32060728  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatg 263  Q
    ||||||||||||    || |||||||||||| || | |||||| |||||||||   |||||||| || ||||||||||||| | |||||||||||||||     
T  32060729 acgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgata 32060827  T
Q  264 ccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  32060828 ccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 160 - 327
Target Start/End: Original strand, 2479795 - 2479962
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| | ||||||||||||| |||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  2479795 acttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcac 2479894  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacact 327  Q
    ||||||||| | || |||| |||||||||||||| |  ||||||||||||||||||||| ||||||||    
T  2479895 gatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaacact 2479962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 12406664 - 12406849
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  | ||||||    
T  12406664 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaa 12406762  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  12406763 ctagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 12406849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 144 - 333
Target Start/End: Original strand, 4873541 - 4873729
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    |||||||||||  ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||| | || |||||      
T  4873541 agtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatcttacggcca 4873640  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacacttttgaa 333  Q
    |   ||||||||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||| ||| |||||||| |||||    
T  4873641 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaacactattgaa 4873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 160 - 325
Target Start/End: Original strand, 47264102 - 47264267
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||||| ||  || ||| ||||||||| |||||| |||||||||||||| ||| |||||||||||||||    
T  47264102 acttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcac 47264201  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||| | || ||||||||||||| |||||||  ||||||||||||||||||||| ||||||    
T  47264202 gatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 65 - 325
Target Start/End: Complemental strand, 20343756 - 20343500
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| | | |||||| ||||||||| |  |||||||||||||| ||  | |||  ||||||  | ||| |||||||||||||||||||||    
T  20343756 ctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgatctg--cgtaccacccaagaaacgaccagtccttatcaaggatactta 20343660  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    |||||||||||| |  || ||||||||||||||||  |||||| |||||||| ||| || |||| | ||||||||||| | | |||||||||||||||||    
T  20343659 acgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgc 20343560  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    || | | |  |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  20343559 cacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 6592702 - 6592921
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||||||||| || | |    
T  6592702 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaa 6592799  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||    
T  6592800 tcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagacca 6592898  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  6592899 caaatttgaagac-aatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 6594918 - 6595137
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||||||||| || | |    
T  6594918 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaa 6595015  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||||| ||||| | || |||||||||| ||||| |||| |||||    
T  6595016 tcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagacca 6595114  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  6595115 caaatttgaagac-aatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 18392561 - 18392780
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  18392561 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 18392658  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||| || ||||||||||| || ||||||||||| | |  |||||||||||||| ||||| | ||  ||||||||| ||||||||||  ||||    
T  18392659 tcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaacca 18392757  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  18392758 caaatttgaagac-aatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 139 - 313
Target Start/End: Complemental strand, 24024004 - 24023830
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||| ||||| |    
T  24024004 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctc 24023905  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagc 313  Q
     ||  |   |||||||| |||||||||| | | || ||||||||||||||||||||| |||||||||||||||||    
T  24023904 tgccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 139 - 318
Target Start/End: Complemental strand, 21811924 - 21811745
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||    || |||||||||||||||||||||||| |||||||| |||||||||||||   |||||    
T  21811924 tgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctca 21811825  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    ||||||| || | ||||||||||||| |||| | ||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  21811824 cggcatctcaga-tcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 170 - 325
Target Start/End: Original strand, 21983712 - 21983867
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaat 269  Q
    ||||||||||||| |||||||| |||| ||| ||| || | ||||| | ||||||||||||||||||||| |||  ||||||||||||||||||   ||     
T  21983712 caagtttgaaaatcgtgtcacgttttcacaaaatcatgccgcgattggtcaccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaa 21983811  T
Q  270 ttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | || |||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  21983812 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 44847735 - 44847614
Alignment:
Q  209 cacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaattt 308  Q
    |||||| || || |||||||||||||||||| ||| |||||||||||||||||||||||| | || |||||||||||||||||||    |||||||||||    
T  44847735 cacgatctgacatcctgcaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaattt 44847636  T
Q  309 gaagccaaatctcaacactttt 330  Q
    |||||||||| |||||| ||||    
T  44847635 gaagccaaatttcaacaatttt 44847614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 31109251 - 31109078
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac-ggc 241  Q
    |||||||||||   ||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||||||||  |||| || |||    
T  31109251 agtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggc 31109152  T
Q  242 atcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | |   |||||||| |||||||||||| | || |||||||||||||||||||||  |||||||||||||||||||    
T  31109151 a-cttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 31109078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 1562368 - 1562587
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||| ||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| |||| |    
T  1562368 caatcgtgtcacgatttg--cgtccgtcacaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaa 1562465  T
Q  203 tcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccac 302  Q
    ||||| ||||||||   ||||   |||| |    |  | | ||| ||||||||||||||| ||||| | || |||||||||| |||||||||| ||||||    
T  1562466 tcgtgacacgatttaaaacccaaaaaacaaaaaaaaagaaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccac 1562565  T
Q  303 aaatttgaagccaaatctcaaca 325  Q
    |||||||||| | ||||||||||    
T  1562566 aaatttgaagac-aatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 170 - 325
Target Start/End: Original strand, 21989377 - 21989531
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaat 269  Q
    |||||| |||||| |||||||| |||| ||| |||||| ||||||| | | ||||||||||||||||||| |||  ||||||||||||||||||   ||     
T  21989377 caagttggaaaatcgtgtcacg-tttcacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaa 21989475  T
Q  270 ttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |  | |||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  21989476 tcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  251 tcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 18389125 - 18389246
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  18389125 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 18389222  T
Q  203 tcgtgtcacgatttggcaccctgc 226  Q
    ||||||||||| || |||||||||    
T  18389223 tcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 12397312 - 12397484
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||   ||| ||||||||||||||||||||| || |             |||||||    
T  12397312 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcatggc-------------ctgcaaa 12397397  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||| ||||| | || || |||||||||||||||||| ||||||||||||||||||||    
T  12397398 ctagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaa 12397484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 24261006 - 24260929
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||||||||||||    
T  24261006 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 24260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 1562310 - 1562364
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  1562310 ctgcacaagaacacataaatactagtcttcctctgttccaatcgtgtcacgattt 1562364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 2361602 - 2361691
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaa 267  Q
    |||||||||||||| || ||||| ||||||||||||||||||| ||| |||| |||||| || |||   |||||||||||||||| ||||    
T  2361602 aaaattgtgtcacgtttccccaaaatcgtgtcacgatttggcatcctacaaaacagctctcgacattgtaaaatcgtgtcacgattccaa 2361691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 4178498 - 4178413
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| |||||||||||||| | | ||||| |||||||||| || ||| | |||||||||||||||||    
T  4178498 aaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 4178413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 24265862 - 24265785
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  24265862 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24265785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 39731236 - 39731177
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  39731236 aaaatctgcacaagaacacttaaatactagccttccattgataaaatcgtgtcacgattt 39731177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 23554764 - 23554653
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacg-atgccaaatttgta 274  Q
    |||||| |||||||| |||||||| |||||||||||||| | ||||||| ||| |||||| || ||| | |||||||||| ||||  ||||||| |||||    
T  23554764 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg-aaaacagctctcgacattaccaaaatcgtgacacgcttgccaaa-ttgta 23554667  T
Q  275 tcacgatttctctg 288  Q
    ||||||||||||||    
T  23554666 tcacgatttctctg 23554653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 24789727 - 24789649
Alignment:
Q  40 ctcttccaaactctccttcaaaaaactgcacaagaacacataa-atactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||| |||||||||||| |  ||||||||||||| | | ||||||||||||||||||  |||||||||||||||||    
T  24789727 ctcttccaacctctccttcaaaga--tgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacgattt 24789649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 25767253 - 25767321
Alignment:
Q  50 ctctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||  |||||||||||||| |||||||||| |||||  ||||| ||||||||||||||||    
T  25767253 ctctccttcaaaat-ctgcacaagaacacttaaatactagtcttccattgataaaatcgtgtcacgattt 25767321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 46516105 - 46516070
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaagctc 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  46516105 acctcctttgtaatccaagtttctctctctaagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 6592644 - 6592698
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6592644 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6592698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 6594860 - 6594914
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6594860 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6594914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 312
Target Start/End: Original strand, 16880475 - 16880648
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctca 237  Q
    |||| |||||||||||  || ||||||| |||||||||   ||| ||||||| |||||||||||||||| |||||||| ||  || |||||| | |||||    
T  16880475 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctca 16880574  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaag 312  Q
    | || || |   |||||||||||||| |||| | ||  ||||||| ||||| ||||||  ||||| |||||||||    
T  16880575 ctgcctc-cctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 312
Target Start/End: Original strand, 16885330 - 16885503
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctca 237  Q
    |||| |||||||||||  || ||||||| |||||||||   ||| ||||||| |||||||||||||||| |||||||| ||  || |||||| | |||||    
T  16885330 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctca 16885429  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaag 312  Q
    | || || |   |||||||||||||| |||| | ||  ||||||| ||||| ||||||  ||||| |||||||||    
T  16885430 ctgcctc-cctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 18389067 - 18389121
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  18389067 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 18389121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 18392503 - 18392557
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  18392503 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 18392557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 4538994 - 4539046
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||| |||||||| |||||||| |||||||||||||| |||||||| ||||    
T  4538994 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattaggcacccttcaaa 4539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 47674386 - 47674438
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  47674386 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 47674438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 47676579 - 47676631
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  47676579 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 47676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 49092159 - 49092223
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    |||||||| |||||| |||||||  |||||||| |||||| |||||||  |||||||||||||||    
T  49092159 agcaagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgcaaacca 49092223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 6360573 - 6360632
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctc 236  Q
    |||||| |||||||| || ||||| |||||||||| ||| ||||||||||||| ||||||    
T  6360573 gaaaatcgtgtcacgtttccccaaaatcgtgtcacaattgggcaccctgcaaaacagctc 6360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 32358496 - 32358582
Alignment:
Q  176 tgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgat 262  Q
    |||||||||||||||| |||||||| ||||| |||||||| |  |||||| |||||| |||||| || | | ||||||||||||||||    
T  32358496 tgaaaattgtgtcacgttttcccaaaatcgtatcacgattggataccctgaaaaccatgctcactgcct-agaaaatcgtgtcacgat 32358582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 48599939 - 48600022
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| || ||||  ||||||||||||||  |||||||||||| |||||| || |||  |||||||||| ||||    
T  48599939 gaaaatcgtgtcacgtttccccataatcgtgtcacgattgtgcaccctgcaaaacagctctcgacattgcaaaatcgtgacacg 48600022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 4796292 - 4796238
Alignment:
Q  175 ttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||||||| ||| |||| ||||||||||||||  ||||||||||||    
T  4796292 ttgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattgagcaccctgcaaa 4796238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 4873379 - 4873424
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctc 54  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||    
T  4873379 cctcctttgttatccaagtt-ctctctctaagctcttccaagctctc 4873424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 79685 - 79714
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  79685 acctcctttgtaatccaagtttctctctct 79714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 79963 - 80004
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  | |||||||||||||||||    
T  79963 tcacgatttctctgttcttccaaatcacaaatttgaagccaa 80004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 2761749 - 2761802
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtg 255  Q
    |||||||||||||| ||||||||||||| |||||| || |||  ||||||||||    
T  2761749 atcgtgtcacgattgggcaccctgcaaaacagctctcgacattgcaaaatcgtg 2761802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 23402813 - 23402784
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  23402813 acctcctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 49091986 - 49092015
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  49091986 acctcctttgtaatccaagtttctctctct 49092015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 1261749 - 1261414
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacat-aaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||| | |||||||||||||||||||||| |||    
T  1261749 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacactttaaatactagccttcctctgataaaat 1261652  T
Q  107 cgtgtcacgattt-------------------gaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgt 187  Q
    |||||||||||||                   |||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1261651 cgtgtcacgatttccagatcgtgtcacgatttgaacgtatgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgt 1261552  T
Q  188 cacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctct 287  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || || |||||||| |    
T  1261551 cacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgt 1261452  T
Q  288 gttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||  |||||||||||||| |||||| ||||||    
T  1261451 gttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 33037600 - 33037295
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||| || | |||||  ||||    
T  33037600 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagtctccttctgaagcaat 33037503  T
Q  107 cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgt 206  Q
    ||||||||||||||  | | ||| |||||| ||||| |||||||||||  ||||||||| ||||||||||   ||| |||||||||||||||||||||||    
T  33037502 cgtgtcacgatttg--cgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 33037405  T
Q  207 gtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaat 306  Q
    |||||||||||||  ||||||||| ||||||||||| | | ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||    
T  33037404 gtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 33037305  T
Q  307 ttgaagccaa 316  Q
    ||||||||||    
T  33037304 ttgaagccaa 33037295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 26288195 - 26288517
Alignment:
Q  11 cctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtg 110  Q
    |||||||||||||||||||||||||||||||||||           || |||| |||||||||||||| |||||||||||||||| |||||| |||||||    
T  26288195 cctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtg 26288283  T
Q  111 tcacgattt-------------------gaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacg 191  Q
    |||||||||                   |||| |||||| ||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  26288284 tcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacg 26288383  T
Q  192 atttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttc 291  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  26288384 atttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttc 26288483  T
Q  292 ttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||| |||||||||||||||| ||| ||||||||    
T  26288484 ttccagaccacaaatttgaagtcaagtctcaaca 26288517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 26301452 - 26301774
Alignment:
Q  11 cctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtg 110  Q
    |||||||||||||||||||||||||||||||||||           || |||| |||||||||||||| |||||||||||||||| |||||| |||||||    
T  26301452 cctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtg 26301540  T
Q  111 tcacgattt-------------------gaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacg 191  Q
    |||||||||                   |||| |||||| ||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  26301541 tcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacg 26301640  T
Q  192 atttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttc 291  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  26301641 atttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttc 26301740  T
Q  292 ttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||| |||||||||||||||| ||| ||||||||    
T  26301741 ttccagaccacaaatttgaagtcaagtctcaaca 26301774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 26313446 - 26313768
Alignment:
Q  11 cctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtg 110  Q
    |||||||||||||||||||||||||||||||||||           || |||| |||||||||||||| |||||||||||||||| |||||| |||||||    
T  26313446 cctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtg 26313534  T
Q  111 tcacgattt-------------------gaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacg 191  Q
    |||||||||                   |||| |||||| ||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  26313535 tcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacg 26313634  T
Q  192 atttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttc 291  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  26313635 atttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttc 26313734  T
Q  292 ttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||| |||||||||||||||| ||| ||||||||    
T  26313735 ttccagaccacaaatttgaagtcaagtctcaaca 26313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 146 - 327
Target Start/End: Complemental strand, 2627497 - 2627316
Alignment:
Q  146 tccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 245  Q
    ||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  2627497 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatca 2627398  T
Q  246 caaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacact 327  Q
    | ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  2627397 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacact 2627316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 7 - 316
Target Start/End: Complemental strand, 4759867 - 4759542
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaa 105  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||  ||||||||||||| || ||||||| ||||||||||   ||    
T  4759867 acctcctttgcaatccaagattctctctctaagctcttccaagctctccttcaaacaa--gcacaagaacacaatatatactagtcttcctctgaagaaa 4759770  T
Q  106 tcgtgtcacgatttgaacata-----------------cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
    ||||||||||||||  | ||                  ||| |||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||    
T  4759769 tcgtgtcacgatttccagatcgtgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtc 4759670  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    ||||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | | |||||||||||||||| |||| | || ||||||||||||||    
T  4759669 acgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctg 4759570  T
Q  289 ttcttccggaccacaaatttgaagccaa 316  Q
    ||||||| ||||||||||||||||||||    
T  4759569 ttcttccagaccacaaatttgaagccaa 4759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 18852959 - 18852635
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||| ||||||||||  ||||    
T  18852959 cctcctttgttatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagtcttcctctgaagcaat 18852862  T
Q  107 cgtgtcacgatttgaacata-------------cgtc----ccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||              ||||    |||||||||||| |||||||||||  ||||||||||||||||||||   ||| ||||||    
T  18852861 cgtgccacgatttccaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtca 18852762  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||||||| |   ||||||||||||||||||||| | ||||||||||||||||||    
T  18852761 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgt 18852662  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  18852661 tcttccagaccacaaatttgaagccaa 18852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 12 - 316
Target Start/End: Original strand, 36979685 - 36980006
Alignment:
Q  12 ctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgt 111  Q
    ||||||||||||||||||||||||||||||||||||| |||| || |||||||   ||||||||||| |||||||||||||||||||||  ||||||||     
T  36979685 ctttgtaatccaagtttctctctctaagctcttccaagctcttctccaaaaaagaacacaagaacacttaaatactagccttcctctgaagcaatcgtgc 36979784  T
Q  112 cacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatt 194  Q
    ||||||||  | ||                 ||  ||||||||||||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||    
T  36979785 cacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatt 36979884  T
Q  195 tcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttc 294  Q
    | ||||||||||| |||||||||||  ||||||||| ||||||||||| | | ||||||||||||||||||||| | || ||||||||||||||||||||    
T  36979885 ttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttc 36979984  T
Q  295 cggaccacaaatttgaagccaa 316  Q
    | ||||||||||||||||||||    
T  36979985 cagaccacaaatttgaagccaa 36980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 18870353 - 18870029
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||| ||| ||||||  ||||    
T  18870353 cctcctttgttatccatgtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagtctttctctgaagcaat 18870256  T
Q  107 cgtgtcacgatttgaacata-------------cgtc----ccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||              ||||    |||||||||||| ||||||||| |  ||||||||||||||||||||   ||| ||||||    
T  18870255 cgtgccacgattttcaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtca 18870156  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||   ||||||||||||||||||||| | || |||||||||||||||    
T  18870155 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgt 18870056  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  18870055 tcttccagaccacaaatttgaagccaa 18870029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 30656088 - 30656274
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  30656088 cccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 30656187  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||| |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  30656188 ctagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30656274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 10683924 - 10683747
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||| |||||||    
T  10683924 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 10683825  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||| |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  10683824 ggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10683747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 102 - 316
Target Start/End: Original strand, 6311716 - 6311927
Alignment:
Q  102 acaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaag 201  Q
    |||||||||||||||||||  |||  | |||||||| |||| ||||||||| |  ||||||||||||||||||||   ||| ||||||||||||||||||    
T  6311716 acaatcgtgtcacgatttg--catctgacccaaggt-tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 6311812  T
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    |||||| |||||||||||  ||||||||| ||||||||||| |   ||||||||||||||||||||| | || ||| ||||||||||||||||| |||||    
T  6311813 atcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagacca 6311912  T
Q  302 caaatttgaagccaa 316  Q
    |||||||||||||||    
T  6311913 caaatttgaagccaa 6311927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 3439267 - 3439088
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||| ||||||||||||||| ||||||||||| | |||||||||||     
T  3439267 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcac 3439169  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||||||| | | || |||||||||||||||||||||  ||||||||||||||| | ||||||||||    
T  3439168 cccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagac-aatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 160 - 325
Target Start/End: Original strand, 7412787 - 7412952
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| || ||  ||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcac 7412886  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||| | || |||||||||||||||||||||  ||||||||||||||| ||||| ||||||    
T  7412887 gatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 31043031 - 31042908
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  31043031 atcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacca 31042932  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| ||||||||||||    
T  31042931 caaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 65 - 326
Target Start/End: Complemental strand, 15290401 - 15290142
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| |  || |||||||||||||||||||||    
T  15290401 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaactaccagtccttatcaaggatactta 15290304  T
Q  165 acgagcaagtttgaaaattgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgat 262  Q
    ||||||||||||    || ||||||||| |||||||| ||||||||||||||||   |||||||| || | ||||||||||| | |||||||||| | ||    
T  15290303 acgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcaat 15290205  T
Q  263 gccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
     ||||| | || |||||||||| ||||||||||  ||||||||||||||| | |||||||||||    
T  15290204 cccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacac 15290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 65 - 326
Target Start/End: Complemental strand, 15470770 - 15470511
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| |  || |||||||||||||||||||||    
T  15470770 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaactaccagtccttatcaaggatactta 15470673  T
Q  165 acgagcaagtttgaaaattgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgat 262  Q
    ||||||||||||    || ||||||||| |||||||| ||||||||||||||||   |||||||| || | ||||||||||| | |||||||||| | ||    
T  15470672 acgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcaat 15470574  T
Q  263 gccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
     ||||| | || |||||||||| ||||||||||  ||||||||||||||| | |||||||||||    
T  15470573 cccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacac 15470511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 131 - 312
Target Start/End: Complemental strand, 7289620 - 7289439
Alignment:
Q  131 ccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 230  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||  |||||||||    
T  7289620 ccaaggta-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac 7289522  T
Q  231 cagctcacggcatcac--aaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaag 312  Q
     |||||| ||| || |   ||||||||||||||||||||| | || |||| |||||||||||||||| ||||||||||||||||    
T  7289521 tagctcatggc-tcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 25327857 - 25327672
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| || ||||||||  ||||||||    
T  25327857 cccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaa 25327759  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||| ||  |   |||||||| ||||| |||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  25327758 ctagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 42575689 - 42575909
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  42575689 caatcgtgtcacgatttg--cgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 42575786  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || | ||||||||||| | |||||||||| |||| ||||| | || |||||||||| ||||||||||  |||    
T  42575787 atcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaacc 42575885  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||||||| | ||||||||||    
T  42575886 acaaatttgaagac-aatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 39784510 - 39784333
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| | |||||||   ||| |||||||||||||||||||||||| |||||||| ||| || ||||||   |||||    
T  39784510 tgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 39784411  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| | |  |||||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  39784410 cggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 10688818 - 10688661
Alignment:
Q  102 acaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaag 201  Q
    |||||||||||||||||||  |||  | |||||||| |||| ||||||||| |  ||||||||||||||||||||   ||| ||||||||||||||||||    
T  10688818 acaatcgtgtcacgatttg--catctgacccaaggt-tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 10688722  T
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    |||||| |||||||||||  ||||||||| ||||||||||| |   |||||||||||||||    
T  10688721 atcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 25689734 - 25689604
Alignment:
Q  131 ccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 230  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||| |||||||||||  |||||| |||||||| ||||||||||| |    
T  25689734 ccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacc 25689635  T
Q  231 cagctcacggcatcacaaaatcgtgtcacgat 262  Q
     ||||||||||| | | |||||||||||||||    
T  25689634 tagctcacggca-cccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 30655951 - 30656060
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatacaat 106  Q
    |||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||   ||||||||||| ||| ||||||| ||||||||||  ||||    
T  30655951 cctcctttgttatccaagtt-ctctctttaagctcttccaagctctccttcaaaaaa--acacaagaacacaatatatactagtcttcctctgaagcaat 30656047  T
Q  107 cgtgtcacgattt 119  Q
    |||| ||||||||    
T  30656048 cgtgccacgattt 30656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 10688932 - 10688841
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctga 100  Q
    |||||||||| |||||||||||||| ||| ||||||||||| ||||| |||  |||||||||||||||||| ||| ||||||| ||||||||||    
T  10688932 cctcctttgttatccaagtttctctttcttagctcttccaagctctctttc--aaaactgcacaagaacacaatatatactagtcttcctctga 10688841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 7289760 - 7289651
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatacaat 106  Q
    |||||||||  ||||||||| |||||||||||||||||||| ||||| |||||||||  |||||||||||| ||| ||||||| ||||||||||   |||    
T  7289760 cctcctttgctatccaagtt-ctctctctaagctcttccaagctctctttcaaaaaa--gcacaagaacacaatatatactagtcttcctctgaagaaat 7289664  T
Q  107 cgtgtcacgattt 119  Q
    |||| ||||||||    
T  7289663 cgtgccacgattt 7289651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 25689841 - 25689764
Alignment:
Q  40 ctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||| |||| ||||||| |  ||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  25689841 ctcttccaacctcttcttcaaaga--tgcacaagaacacttaaatactagccttcctctgttgcaatcgtgtcacgattt 25689764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 35745793 - 35745979
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  ||  |||||   |||||    
T  35745793 tgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctca 35745892  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  35745893 cggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 178 - 288
Target Start/End: Original strand, 1746663 - 1746773
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacga-tgccaaatttgtat 275  Q
    ||||| ||||||||||||||||| |||||||||||||| | | ||||| ||| |||||| || ||| | |||||||||||||||| ||||||| |||| |    
T  1746663 aaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg-aaaacagctctcgacattaccaaaatcgtgtcacgattgccaaa-ttgtgt 1746760  T
Q  276 cacgatttctctg 288  Q
    |||||||||||||    
T  1746761 cacgatttctctg 1746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 31043190 - 31043131
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  31043190 aaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 31043131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 43036148 - 43036062
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgat 262  Q
    |||||| |||||||| ||| |||| |||||||||||||| | ||||||||||| || |||||||||||  | |||||||||||||||    
T  43036148 gaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcgaaatcgtgtcacgat 43036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 10688667 - 10688626
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  10688667 tcacgatttctctgttcttccagaccacaaatttgaagccaa 10688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 19945784 - 19945869
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| |||||||||||||| || |||||||||||||| | | ||||| |||||||||| || ||| | |||||||||||||||||    
T  19945784 aaaatcgtgtcacgatttcctaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgat 19945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 31217980 - 31217895
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| |||||||||| ||| | | ||||| |||||||||| || ||| | |||||||||||||||||    
T  31217980 aaaatcgtgtcacgatttcccaaaatcgtgtcacaattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 31217895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 42435652 - 42435736
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| || ||||| |||||||||||||| | ||||||||||| || |||||||||||  |||||||||| ||||    
T  42435652 gaaaatcgtgtcacgtttccccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacg 42435736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 42575631 - 42575686
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 120  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  42575631 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 42575686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 5702109 - 5701960
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa-cca-gctcacggcatcacaaaatcgtgtcacgatgcc 265  Q
    ||||||||||||||| |||||||| ||| |||| |||||| |||||||  |||||||||||| ||| |||||| |  | | ||||||  | |||| ||      
T  5702109 agcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaaccatgctcaccgtct-agaaaatcaagacacgttgat 5702011  T
Q  266 aaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
     || | || |||||||||||||||||||||  |||||||||||||||||||    
T  5702010 gaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 6311603 - 6311693
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctga 100  Q
    |||||||||  ||||||||| || ||||||||||||||||| |||||  ||||||||  |||||||||||| ||| ||||||| ||||||||||    
T  6311603 cctcctttgctatccaagtt-ctatctctaagctcttccaagctctctctcaaaaaa--gcacaagaacacaatatatactagtcttcctctga 6311693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 22976042 - 22975950
Alignment:
Q  176 tgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaa 268  Q
    ||||||| |||||||| |||||||| |||||||||||||| | ||||||| |||||| || ||| || | | ||||||||||||||||| ||||    
T  22976042 tgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaaccatgcccactgcct-aaaaaatcgtgtcacgatgtcaaa 22975950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 34256949 - 34257033
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| |||||||||||||| | | ||||| ||| |||||| || ||| | |||||||||||||||||    
T  34256949 aaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg-aaaacagctctcgacattaccaaaatcgtgtcacgat 34257033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 2627612 - 2627543
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||   |||||||||||||| |||||||||||| |||   |||| ||||||||||||||||    
T  2627612 aactctccttcaaat--ctgcacaagaacacttaaatactagccctccaacgataaaatcgtgtcacgattt 2627543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 15212511 - 15212459
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  15212511 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 15212459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 31043106 - 31043034
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttga 178  Q
    ||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| |||||||||||||||||||    
T  31043106 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttga 31043034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 4456583 - 4456625
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaa 317  Q
    ||||||||||| |||||||||  ||||||||||||||||||||    
T  4456583 tcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 4733550 - 4733488
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 239  Q
    |||||| |||||||| |||||||| ||||||||||||||   ||||||| ||| |||||||||    
T  4733550 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctggaaaacagctcacg 4733488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 7289667 - 7289629
Alignment:
Q  179 aaattgtgtcacgatttcccaagatcgtgtcacgatttg 217  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  7289667 aaatcgtgccacgatttcccaagatcgtgtcacgatttg 7289629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 4456325 - 4456354
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  4456325 acctcctttgtaatccaagtttctctctct 4456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 5702280 - 5702251
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  5702280 acctcctttgtaatccaagtttctctctct 5702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 7412637 - 7412666
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  7412637 acctcctttgtaatccaagtttctctctct 7412666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 19175362 - 19175305
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 225  Q
    |||||||||||||||  ||||||| |||||||| |||||| |||||||  ||||||||    
T  19175362 agcaagtttgaaaatcatgtcacgttttcccaaaatcgtgacacgattgagcaccctg 19175305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 23799376 - 23799347
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  23799376 acctcctttgtaatccaagtttctctctct 23799347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 182; Significance: 6e-98; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 60 - 325
Target Start/End: Original strand, 9044 - 9308
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 159  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |  | |||||||||||||| ||| ||||||||||| |||     
T  9044 aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaa 9143  T
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9144 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 9242  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9243 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 11534 - 11753
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    |||||||||||||| |  | |||||||||||||| ||| ||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||| |||    
T  11534 atcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atc 11632  T
Q  205 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaa 304  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  11633 gtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaa 11732  T
Q  305 atttgaagccaaatctcaaca 325  Q
     ||||||||||||||||||||    
T  11733 ttttgaagccaaatctcaaca 11753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 11470 - 11529
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  11470 aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 11529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 181; Significance: 2e-97; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 5674562 - 5674229
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacat-aaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||   |||||||||||||| | ||||||||||||||||||||||||||    
T  5674562 cctcctttgtaatccaagtttatctctctaagctcttccaagctctcctccaaat--ctgcacaagaacactttaaatactagccttcctctgatacaat 5674465  T
Q  107 cgtgtcacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||||||||||||  | ||                 ||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  5674464 cgtgtcacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtca 5674365  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  5674364 cgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgt 5674265  T
Q  290 tcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||| |||||||||||||||||||| | ||||||    
T  5674264 tcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 65 - 325
Target Start/End: Original strand, 2171844 - 2172104
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| |||||    
T  2171844 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcttggaaactta 2171943  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2171944 acgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgc 2172043  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||  | || |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2172044 caaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 106 - 326
Target Start/End: Original strand, 22709426 - 22709646
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||||| |  |||||| ||||||| ||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  22709426 tcgtgtcacgatttgtatgtacgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcg 22709525  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||| |||||||||    
T  22709526 tgtcacgatttggcaccctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaa 22709625  T
Q  306 tttgaagccaaatctcaacac 326  Q
    |||||||||||||||||||||    
T  22709626 tttgaagccaaatctcaacac 22709646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 3073147 - 3073343
Alignment:
Q  129 tcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaa 228  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |  |||||||||||||||||||||||| |     
T  3073147 tcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtag 3073246  T
Q  229 accagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||||  |||||||||| |||||||||||||||| ||||||||||||    
T  3073247 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 108 - 325
Target Start/End: Complemental strand, 411903 - 411685
Alignment:
Q  108 gtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaa-aattgtgtcacgatttcccaagatcgt 206  Q
    ||||||||||| |  ||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||| | ||| ||||||||||||||||  |||||    
T  411903 gtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgt 411804  T
Q  207 gtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaat 306  Q
    ||||||||||||||||||||| || ||||||||||| ||| |||| ||||||| |||||||||| || |||||||||| || ||||||| ||||||||||    
T  411803 gtcacgatttggcaccctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaat 411704  T
Q  307 ttgaagccaaatctcaaca 325  Q
    |||||| ||||||||||||    
T  411703 ttgaagacaaatctcaaca 411685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 65 - 325
Target Start/End: Original strand, 6097747 - 6097986
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||| |  | |||||||| ||||| ||| ||||||||||| ||| |||||    
T  6097747 ctgcacaagaacacttaaatactagtcttcccctgataaaatcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaactta 6097846  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    ||||||||||||| ||||                     ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  6097847 acgagcaagtttgcaaat---------------------cgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgc 6097925  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||| || ||| |||||| ||||||||||  ||||||||||||||| ||||||||||||    
T  6097926 caaattcgtgtcaggatttccctgttcttccaaaccacaaatttgaagacaaatctcaaca 6097986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 11857374 - 11857559
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  | ||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  11857374 cccaaggt-tgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 11857472  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  11857473 ctagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11857559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 30125185 - 30125026
Alignment:
Q  157 gatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgt 256  Q
    ||||||||||||||||||||   ||| ||||||||||||||||| |||||| |||||||||||  ||||||||| ||||||||||| | | |||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  257 cacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  30125085 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30125026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 5266418 - 5266610
Alignment:
Q  69 acaagaacacataa-atactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacg 167  Q
    ||||||||||| || ||||||| ||||||||||  ||||||||||||||||||  | | |||  ||||||||||| |||||||||||||||||||||| |    
T  5266418 acaagaacacaaaatatactagtcttcctctgaagcaatcgtgtcacgatttg--cgtccgtttcaaggtatgaccagtccttatcaaggatacttaatg 5266515  T
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    |||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | | |||||||||||||||    
T  5266516 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 14742119 - 14741934
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||| ||||||||||| |||||||||||  ||||||||    
T  14742119 cccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaa 14742021  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | |||||||| |  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  14742020 ctagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 22010382 - 22010197
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  22010382 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 22010284  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | | || |||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  22010283 ctaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 144 - 325
Target Start/End: Original strand, 16578921 - 16579101
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |||||| |||||||| ||||||||||| | |||||||||||     
T  16578921 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16579020  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  16579021 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 16616459 - 16616279
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |||||| |||||||| ||||||||||| | |||||||||||     
T  16616459 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16616360  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  16616359 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 65 - 325
Target Start/End: Complemental strand, 27647724 - 27647467
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| | | |||||| ||||||||  | ||||||||||||||| ||  | |||  ||||||  | ||| ||||  |||||||||||||||    
T  27647724 ctgcacaagaacacttta-tactagtcttcctctattgcaatcgtgtcacgatctg--cgtaccacccaagaaacgaccagtcaatatcaaggatactta 27647628  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    |||||||||||| |  || ||||||||||||| ||  |||||| |||||||| ||||||||||| | ||||||||||| | | |||||||||||||||||    
T  27647627 acgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgc 27647528  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    || | | || |||||||||| |||||||||| |||||||||||||||| |||| |||||||    
T  27647527 cacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaactcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 103 - 327
Target Start/End: Complemental strand, 25421016 - 25420795
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||| ||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  25421016 caatcatgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 25420919  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||| | ||||| |||| |||||||||| |||||||||| |||||    
T  25420918 tcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagacca 25420820  T
Q  302 caaatttgaagccaaatctcaacact 327  Q
    ||||||||||| | ||||||||||||    
T  25420819 caaatttgaagac-aatctcaacact 25420795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 26253712 - 26253589
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||| ||| | ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||| | |||||    
T  26253712 atcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacca 26253613  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| ||||||||||||    
T  26253612 caaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 160 - 325
Target Start/End: Original strand, 23896792 - 23896957
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||| |||||  ||||||||| |||||||||||||| ||||||  || |||||||||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcac 23896891  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||| | || ||||||||| ||||||||| |  ||||||||||||||| ||||| ||||||    
T  23896892 gatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 34166886 - 34166673
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  34166886 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 34166789  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  34166788 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 34166690  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  34166689 acaaatttgaagacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 16554634 - 16554454
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |||||| ||| |||| |||||||| || | |||||||||||     
T  16554634 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16554535  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||| ||||| |  | |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  16554534 cccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 16631190 - 16631010
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |||||| ||| |||| |||||||| || | |||||||||||     
T  16631190 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16631091  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||| ||||| |  | |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  16631090 cccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 13151069 - 13150856
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  13151069 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 13150972  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||   ||    
T  13150971 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagcc 13150873  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  13150872 acaaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 6136328 - 6136547
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    |||| |||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |    
T  6136328 caattgtgtcacgatttg--cttccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaa 6136425  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| ||||||||    |||||||| || ||||||||||||| | |||||||||| |||| ||||| | || |||||||||| ||||||||||  ||||    
T  6136426 tcgtgccacgattttcacccctgcaaccctagctcacggcatc-cgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaacca 6136524  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  6136525 caaatttgaagac-aatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 5757116 - 5756951
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| |||||  ||||||||| |||||||||||||| |||||| ||| ||||||| |||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcac 5757017  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| | | || |||| |||||||| |||||    |||| |||||| ||||||||| ||||||    
T  5757016 gatgccacaatcgtgtcacaatttctctattcttttaaaccataaatttaaagccaaatttcaaca 5756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 33342468 - 33342688
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttccca-ag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||||||||||||| |     
T  33342468 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaa 33342565  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || ||||||||||||| | |||||| ||| |||| ||||| | || ||||||||||  |||||||||  |||    
T  33342566 atcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaacc 33342664  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||||||| | ||||||||||    
T  33342665 acaaatttgaagac-aatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 34164664 - 34164451
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  34164664 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 34164567  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||| | | || |||||||||| ||||||||||   ||    
T  34164566 atcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagcc 34164468  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  34164467 acaaatttgaagacaaa 34164451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 6438898 - 6439075
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||  ||| || ||||||   |||||    
T  6438898 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctca 6438997  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| | |  |||||||||||||| ||||| | || ||||||||||| ||||||||| ||||| ||||||||||||||    
T  6438998 cggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaa 6439075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 14737259 - 14737128
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||| ||||||||||| |||||||||||  ||||||||    
T  14737259 cccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaa 14737161  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    | ||||||||||  |   |||||||||||||||    
T  14737160 ctagctcacggccacttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 16652877 - 16652759
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||||| || | |||||  ||||| || ||||||| ||| | |||||||||||     
T  16652877 agtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcac 16652778  T
Q  244 cacaaaatcgtgtcacgat 262  Q
    | | |||||||||||||||    
T  16652777 cccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 6027053 - 6026834
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | |||  ||||||||||||||||||||||||||||||||    || |||||||||||| || | |    
T  6027053 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaa 6026956  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||| | ||| | | |||||||||||| |||||  | | || |||||||||| || |||||||  ||||    
T  6026955 tcgtgccacgatttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaacca 6026857  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  6026856 caaatttgaagac-aatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 325
Target Start/End: Original strand, 16839135 - 16839331
Alignment:
Q  128 gtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgca 227  Q
    |||||||||| |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || |||    
T  16839135 gtcccaaggt-tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagca 16839233  T
Q  228 aac-cagctcacggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||   |||||||||||| |   |||||||||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  16839234 aacttggctcacggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 28155256 - 28155133
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||    || |||||||||||||||||||||||| |||||||| |||||||||||||   |||||    
T  28155256 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctca 28155157  T
Q  238 cggcatcacaaaatcgtgtcacgat 262  Q
    ||||||| | | |||||||||||||    
T  28155156 cggcatctc-agatcgtgtcacgat 28155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 325
Target Start/End: Complemental strand, 33330118 - 33329932
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   |||||    
T  33330118 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33330019  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  33330018 cggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 5343879 - 5343956
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||||||||||||    
T  5343879 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 5343956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 325
Target Start/End: Complemental strand, 33335615 - 33335429
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   |||||    
T  33335615 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33335516  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| | |    |||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  33335515 cggcatctc-cgatcgtgtcacgattgccaaa-tcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 25421110 - 25420999
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||| ||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  25421110 caatcatgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccca-a 25421014  T
Q  203 tcgtgtcacgatttg 217  Q
    || ||||||||||||    
T  25421013 tcatgtcacgatttg 25420999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 22709308 - 22709396
Alignment:
Q  8 cctcctttgtaatccaagtttctctctct--aagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcc 95  Q
    ||||||||||||||||||||| |||||||  || |||||||||||||| || |||||  |||||||||||||| |||||||||| |||||    
T  22709308 cctcctttgtaatccaagtttttctctcttcaaactcttccaaactctactccaaaat-ctgcacaagaacacttaaatactagtcttcc 22709396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 6005821 - 6005898
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  6005821 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 6005898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 316
Target Start/End: Complemental strand, 5017121 - 5016977
Alignment:
Q  171 aagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaat 269  Q
    |||||||||||| |||||||| |||| ||| |||||| |||||||  ||||||||||||||| |||||| || |    |||||||| |||| ||   ||     
T  5017121 aagtttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgctt--ggaaatcgtgacacgttgatgaaa 5017024  T
Q  270 ttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | || ||||||||| |||||||||||  |||||||||||||||||||    
T  5017023 tcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 5016977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 3073064 - 3073118
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  3073064 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 3073118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 31086101 - 31085954
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    ||||||||||||||| |||||||| ||| |||| |||||| |||||||  ||||||||||||||| |||||| ||  |   ||||| || |||| ||       
T  31086101 agcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgc--ctggaaatcatgacacgctgatg 31086004  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    || | || ||||||||||||||||||||   |||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaa 31085954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 3809367 - 3809452
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    |||||| |||||||| || ||||| |||||||||||||| |||||||| | || |||||| || |||  |||||||||||||||||    
T  3809367 gaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcacccttcgaaacagctctcgacattgcaaaatcgtgtcacgat 3809452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 5266604 - 5266645
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  5266604 tcacgatttctctgttcttccagaccacaaatttgaagccaa 5266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 14737134 - 14737093
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  14737134 tcacgatttctctgttcttccagaccacaaatttgaagccaa 14737093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 33342410 - 33342465
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttg 120  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  33342410 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg 33342465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 411965 - 411911
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  411965 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 411911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 6027111 - 6027057
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  6027111 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 6027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 25421168 - 25421114
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  25421168 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 25421114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 28155139 - 28155098
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  28155139 tcacgattgctctgttcttccagaccacaaatttgaagccaa 28155098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 5343990 - 5344056
Alignment:
Q  250 atcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||| | || | ||  ||||||||||||||||| ||  |||||||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaa 5344056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 6136271 - 6136324
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||| || |||||||||| ||||||||| | |||||||||||||||||    
T  6136271 ctgcacaagaa-acttaaatactagtcttcctctgttccaatcgtgtcacgattt 6136324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 10076811 - 10076729
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    ||||| || ||||| |||||||| ||||| ||| |||| ||||||||||||| |||||| || |||  |||||||||| ||||    
T  10076811 aaaatcgtatcacgttttcccaaaatcgtatcatgattgggcaccctgcaaaacagctctcgacattgcaaaatcgtgacacg 10076729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 5407353 - 5407437
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    |||| ||||||||||||| |||| |||||||||||||| | ||| ||| ||| |||||| || ||| | |||||||||||||||||    
T  5407353 aaaaatgtgtcacgattttccaaaatcgtgtcacgattggacactctg-aaaacagctctcgacattaccaaaatcgtgtcacgat 5407437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 5411678 - 5411762
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    |||| ||||||||||||| |||| |||||||||||||| | ||| ||| ||| |||||| || ||| | |||||||||||||||||    
T  5411678 aaaaatgtgtcacgattttccaaaatcgtgtcacgattggacactctg-aaaacagctctcgacattaccaaaatcgtgtcacgat 5411762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 5757278 - 5757249
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  5757278 acctcctttgtaatccaagtttctctctct 5757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 10076991 - 10076962
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  10076991 acctcctttgtaatccaagtttctctctct 10076962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 23896649 - 23896678
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  23896649 acctcctttgtaatccaagtttctctctct 23896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 3e-96; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 25409931 - 25410266
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaat- 106  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||| ||||||  | ||||||||||||| |||     
T  25409931 cctcctctgtaatccaagtttctctctctaagctcttccaagctctacttcaaaat-ctgcacaagaacacttaaatatcatccttcctctgataaaatt 25410029  T
Q  107 ------------------cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtc 188  Q
                      |||||||||||| | || |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  25410030 gtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtc 25410129  T
Q  189 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  25410130 acgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 25410229  T
Q  289 ttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  25410230 ttcttccagaccacaaatttgaagccaaaactcaaca 25410266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 106 - 325
Target Start/End: Complemental strand, 32289367 - 32289148
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| || | |||||||||||||| ||| ||||||||||| ||| |||||||||||||||||  |||| ||||||||||| | ||||||||    
T  32289367 tcgtgtcacgattggagcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcg 32289268  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  32289267 tgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaa 32289168  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||    
T  32289167 tttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 106 - 325
Target Start/End: Complemental strand, 30833140 - 30832921
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  30833140 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcg 30833041  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | ||||||||||||||||||||| |||||||||    
T  30833040 tgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaa 30832941  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||    
T  30832940 tttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 106 - 325
Target Start/End: Original strand, 3492158 - 3492377
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| ||||||||||||||||| | ||| ||||||||||||||||||||||    
T  3492158 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcg 3492257  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| | |||||||||    
T  3492258 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaa 3492357  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||    
T  3492358 tttgaagccaaatctcaaca 3492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 104 - 325
Target Start/End: Original strand, 40739236 - 40739457
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagat 203  Q
    |||||||||||||||   || |||||| ||||||| |||  |||||||||  | | ||||||||||||||||||||||||||||||| ||| | ||||||    
T  40739236 aatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaattgtgtcacaattccacaagat 40739335  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||| |||||||    
T  40739336 cgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagaccaca 40739435  T
Q  304 aatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||||    
T  40739436 aatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 4484703 - 4484923
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    |||||||||||||| | || |||||||||||||| ||| |||||||||||  || |||||||||||||||||| |||| ||||||||||| |  ||||||    
T  4484703 atcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatc 4484802  T
Q  205 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaa 304  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  4484803 gtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaa 4484902  T
Q  305 atttgaagccaaatctcaaca 325  Q
    ||||||||  |||||||||||    
T  4484903 atttgaagtaaaatctcaaca 4484923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 9296194 - 9295870
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacat-aaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||  |||||||||||| | ||||||||| ||||||||||  ||||    
T  9296194 cctcctttgtaatccaagtttttctctctaagctcttccaagctctcctccaaaaaa--gcacaagaacactttaaatactagtcttcctctgaagcaat 9296097  T
Q  107 cgtgtcacgatttgaacata-----------------cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||||||||||||  | ||                  || ||||||||||||| |||||||||||||||||||||| ||||||||||   ||| ||||||    
T  9296096 cgtgtcacgattttcagatcgtgtcacgatttgcgtccgacccaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtca 9295997  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |   ||||||||||||||||||||| | || |||||||||||||||    
T  9295996 cgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgt 9295897  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  9295896 tcttccagaccacaaatttgaagccaa 9295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 146 - 325
Target Start/End: Complemental strand, 6266453 - 6266274
Alignment:
Q  146 tccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 245  Q
    ||||||||| ||| |||||||||| ||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6266453 tccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 6266354  T
Q  246 caaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | |||| ||||||||||| |||||| || ||||||||||  ||||||||| |||||||||||||||| ||||||||||||    
T  6266353 cgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 14291793 - 14292117
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  || |||| ||||||||||||||| || ||||||| ||||||||||   |||    
T  14291793 cctcctttgtaatccaagtttctctctctaagctcttccaagctctc--tctaaaatctgcacaagaacacaatatatactagtcttcctctgaagaaat 14291890  T
Q  107 cgtgtcacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||  | ||                 ||  ||||||||||||| |||||||||||  | ||||||||||||||||||   ||| ||||||    
T  14291891 cgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtca 14291990  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | | | ||||||||||||||||||| | || |||||||||||||||    
T  14291991 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgt 14292090  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  14292091 tcttccagaccacaaatttgaagccaa 14292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 105 - 316
Target Start/End: Complemental strand, 11098604 - 11098395
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    ||||||||||||||||  | |||  |||||||| |||| |||||||||||  ||||||||||||||||||||  |||| |||||||||||||||||||||    
T  11098604 atcgtgtcacgatttg--cgtacaacccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatc 11098507  T
Q  205 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaa 304  Q
    ||| |||||||||||  ||||||||| ||||||||||| |   |||||||||||| |||||||| | || ||||||||||||||||||||| ||||||||    
T  11098506 gtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaa 11098407  T
Q  305 atttgaagccaa 316  Q
    ||||||||||||    
T  11098406 atttgaagccaa 11098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 12647748 - 12647967
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |    
T  12647748 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaa 12647845  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||    
T  12647846 tcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagacca 12647944  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  12647945 caaatttgaagac-aatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 39811657 - 39811485
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||||||||  ||| ||||       
T  39811657 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgcttacggtca 39811558  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  39811557 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 28258815 - 28258713
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| || ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 28258716  T
Q  260 gat 262  Q
    |||    
T  28258715 gat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 44310547 - 44310479
Alignment:
Q  248 aaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  44310547 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44310479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 32247262 - 32247344
Alignment:
Q  233 gctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||| |||| |||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  32247262 gctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32247344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 33528253 - 33528106
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    ||||||||||||||| |||||||| |||||||| |||||| |||||||  ||||||||||||||| |||||| ||  |  |||||| ||  ||| ||       
T  33528253 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgc--ctgaaaatcatgatacgttgatg 33528156  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    || |||| |||||||||||||||||||||  |||||||||||||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 33528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 11098719 - 11098628
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||  | ||| |||||||||||||| ||| || |||| ||||||||||    
T  11098719 cctcctttgtaatccaagtttctctctctaagctcttccaagctcttct--acaaatctgcacaagaacacaatatatgctagtcttcctctga 11098628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 19349682 - 19349868
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| | |||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   |||||    
T  19349682 tgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 19349781  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   |||||||||||| ||||||| |||   ||||||| ||||||||||||  |||||||||||||| |||| | ||||||    
T  19349782 cggcatctc-cgatcgtgtcacgattgccaaa-ttgcgacacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 4484644 - 4484698
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  4484644 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt 4484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 19344824 - 19345010
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| || ||||| ||  || ||||||   |||||    
T  19344824 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctca 19344923  T
Q  238 cggcatcacaaaatcgtgtcacga-tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| |   ||||| |||||| ||||||| | |   ||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  19344924 cggcatctc-cgatcgtatcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 6266567 - 6266499
Alignment:
Q  49 actctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||   |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  6266567 actctccttcaaat--ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 6266499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 40739161 - 40739232
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||| || ||||||||||||||||||||| ||||||| || ||||  |||||| ||||||||||||||||    
T  40739161 aactctactccaaaaaactgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt 40739232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 34389318 - 34389380
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 230  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||| | ||||||| ||||    
T  34389318 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaac 34389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 12647690 - 12647744
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  12647690 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 12647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 2837286 - 2837339
Alignment:
Q  176 tgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  2837286 tgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 2837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 3492052 - 3492085
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagct 41  Q
    ||||||||||||||||||||||||||||||||||    
T  3492052 cctcctttgtaatccaagtttctctctctaagct 3492085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 8389673 - 8389632
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  8389673 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 8389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 20522796 - 20522837
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  20522796 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 20522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 10706882 - 10706734
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aaacca-gctcacggcatcacaaaatcgtgtcacgatgcc 265  Q
    ||||||||||||||| |||||||| |||||||| |||||| ||| |||  ||||||||  |||||| |||| | || | |  |||||||| |||| ||      
T  10706882 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctgagaaaccatgctccctgcctga--aaatcgtgacacgttgat 10706785  T
Q  266 aaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
     || | || |||||||||||||||||||||  || ||||||||||||||||    
T  10706784 gaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaa 10706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 14698809 - 14698778
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  14698809 acctcctttgtaatccaagtttctctctctaa 14698778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 29867604 - 29867491
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacg-atgccaaatttgta 274  Q
    |||||| |||||||| |||||||| |||||||||||||| | ||||||| ||| || ||| || ||| | |||||||||||||||  ||||||| | ||     
T  29867604 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg-aaaacaactctcgacattaccaaaatcgtgtcacgcttgccaaa-tcgtg 29867507  T
Q  275 tcacgatttctctgtt 290  Q
    ||||||||||||||||    
T  29867506 tcacgatttctctgtt 29867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 33118432 - 33118463
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  33118432 acctcctttgtaatccaagtttctctctctaa 33118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 39483346 - 39483401
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 225  Q
    ||||||||||||| |||||||| |||||||| |||||| |||||||  ||||||||    
T  39483346 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctg 39483401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 8389777 - 8389732
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacga 213  Q
    ||||||||||||||| |||||||| |||||||| |||||| |||||    
T  8389777 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacga 8389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 21630519 - 21630560
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  || ||||||||||||||||    
T  21630519 tcacgatttctctgttcttccaaactacaaatttgaagccaa 21630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 28258977 - 28258948
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  28258977 acctcctttgtaatccaagtttctctctct 28258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 33528424 - 33528395
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  33528424 acctcctttgtaatccaagtttctctctct 33528395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 36757467 - 36757426
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||| |||||||||||  |||||||||||||||||||    
T  36757467 tcacgatttttctgttcttccaaaccacaaatttgaagccaa 36757426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 39284622 - 39284585
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgat 214  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  39284622 gaaaattgtgtcacgttttcccaaaatcgtgtcacgat 39284585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 39483451 - 39483492
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  39483451 tcacaatttctctgttcttccaaaccacaaatttgaagccaa 39483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 1e-86; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 106 - 328
Target Start/End: Complemental strand, 28468196 - 28467974
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||||| || |||||| ||||||| ||| |||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  28468196 tcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcg 28468097  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||  ||||||||    
T  28468096 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaa 28467997  T
Q  306 tttgaagccaaatctcaacactt 328  Q
    |||||||||||||||||||||||    
T  28467996 tttgaagccaaatctcaacactt 28467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 13992659 - 13992879
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    ||||||||||||||   || |||||| ||||||||||| ||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||| |||    
T  13992659 atcgtgtcacgattgatacgtacgtcacaaggtatgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatc 13992758  T
Q  205 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaa 304  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  13992759 gtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaa 13992858  T
Q  305 atttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||||    
T  13992859 atttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 31495704 - 31495902
Alignment:
Q  127 cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc 226  Q
    |||||||||  | ||| ||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||    
T  31495704 cgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgc 31495803  T
Q  227 aaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  31495804 aaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 24742245 - 24742569
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||   ||||||||||||||| || ||||||| ||||||||||   |||    
T  24742245 cctcctttgtaatccaagtttctctctctaagctcttccaagctctcctacaaat--ctgcacaagaacacaatatatactagtcttcctctgaagaaat 24742342  T
Q  107 cgtgtcacgatttgaacata-----------------cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||||||||||||  | ||                  ||| || ||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||    
T  24742343 cgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtca 24742442  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | | ||||||||||||||||||||| | || |||||||||||||||    
T  24742443 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgt 24742542  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  24742543 tcttccagaccacaaatttgaagccaa 24742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 29760946 - 29761196
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||     ||| ||||||||||||||| || ||||||| ||||||||||   |||    
T  29760946 cctcctttgtaatccaagtttctcactctaagttcttccaagctctcccc---aaatctgcacaagaacacaatatatactagtcttcctctgaagaaat 29761042  T
Q  107 cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgt 206  Q
    |||| |||||||||  | | ||| |||||||||||| |||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  29761043 cgtgccacgatttg--cgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 29761140  T
Q  207 gtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    | |||||||||||  ||||||||| ||||||||||| | | |||||||||||||||    
T  29761141 gccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 9224092 - 9223907
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  9224092 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 9223994  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  9223993 ctagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 9228879 - 9228694
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  9228879 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 9228781  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  9228780 cgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 105 - 316
Target Start/End: Complemental strand, 56141728 - 56141519
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatc 204  Q
    ||||||||||||||||  |||  | ||||||||| ||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||||||||||||    
T  56141728 atcgtgtcacgatttg--catctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 56141632  T
Q  205 gtgtcacgattt-ggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    ||| |||||||| |||  ||||||||| |||||||| |  | | ||||||||||||||||||||| | || ||||||||||||||||||||| |||||||    
T  56141631 gtgccacgattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 56141532  T
Q  304 aatttgaagccaa 316  Q
    |||||||||||||    
T  56141531 aatttgaagccaa 56141519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 144 - 316
Target Start/End: Original strand, 51520870 - 51521042
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||| |||||||||||||||||||||   ||| |||||| ||||||||||||||||| |||||||||||  ||||||||| ||||||||||      
T  51520870 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 51520969  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  51520970 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 51521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 31985250 - 31985127
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| | || ||    
T  31985250 atcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatca 31985151  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||||||    
T  31985150 caaatttgaagccaaatctcaaca 31985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 5733061 - 5733239
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagc-tca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||  |||||||||  || |||    
T  5733061 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 5733160  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| ||| ||||||||||||||||||||| | || ||| ||||||||||||||| | ||||||||||||||||||||    
T  5733161 cggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 5733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 7122486 - 7122274
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |    
T  7122486 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaa 7122389  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||||| ||||| | || |||||||||| ||||||||||  ||||    
T  7122388 tcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacacca 7122290  T
Q  302 caaatttgaagccaaa 317  Q
    ||||||||||| ||||    
T  7122289 caaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 144 - 317
Target Start/End: Complemental strand, 7124669 - 7124496
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggca 242  Q
    |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |||||| |||||||||   |||||||| || |||||||||||    
T  7124669 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 7124570  T
Q  243 tcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaa 317  Q
    || | ||||||||||||||| ||||| | || |||||||||| ||||||||||  ||||||||||||||| ||||    
T  7124569 tc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 45347502 - 45347325
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||| || ||||||  | ||||    
T  45347502 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 45347403  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||| | || |||||||||||| ||||| | || ||||||||||| ||||||||| ||||||||||||||||||||    
T  45347402 cggcatctctaa-tcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaa 45347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 18712448 - 18712294
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  18712448 cccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 18712350  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttct 285  Q
    | ||||||||||  |   ||||||||||||||||||||| | || |||||||||||    
T  18712349 ctagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 8393162 - 8392982
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggca 242  Q
    ||||||||||| |||||||||||||||||||||    || |||||||||||| || | |||||| |||||||||   |||||||| || |||||||||||    
T  8393162 agtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 8393063  T
Q  243 tcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    || | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  8393062 tc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 8395371 - 8395191
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggca 242  Q
    ||||||||||| |||||||||||||||||||||    ||||||||||||||| || | ||||||  ||||||||   |||||||| || |||||||||||    
T  8395371 agtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcacggca 8395272  T
Q  243 tcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    || | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  8395271 tc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 18856124 - 18856301
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| ||||||||||||||||||||| || |||||||| ||| || ||||||   |||||    
T  18856124 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctca 18856223  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| | |  |||||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  18856224 cggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18856301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 3814421 - 3814597
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| ||||||||||||||||| |||||| |||||||||||  | |||||||  ||| ||    
T  3814421 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaacttgcttac 3814519  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||   |   ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  3814520 ggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 3814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 5135869 - 5135649
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | |||  ||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  5135869 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 5135772  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||   ||    
T  5135771 atcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagcc 5135673  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||||||| | ||||||||||    
T  5135672 acaaatttgaagac-aatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 5138095 - 5137875
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | |||  ||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  5138095 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 5137998  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||   ||    
T  5137997 atcgtgacacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagcc 5137899  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||||||| | ||||||||||    
T  5137898 acaaatttgaagac-aatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 28468333 - 28468220
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaa---tactagccttcctctgataca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||| ||||   |||||| ||||| |||||| |    
T  28468333 cctcctttgtaatccaagtttctctctctaagctcttccaagctctcc-tccaaaatctgcacaagaacacttaaatactactagtcttccactgataaa 28468235  T
Q  105 atcgtgtcacgattt 119  Q
    |||||||||||||||    
T  28468234 atcgtgtcacgattt 28468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 171 - 325
Target Start/End: Original strand, 5148148 - 5148302
Alignment:
Q  171 aagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatt 270  Q
    |||||||||||| |||||| | |||| ||| |||||| ||||||| | |||||||||||| |||||||| |||  ||||||||||||||| ||  ||| |    
T  5148148 aagtttgaaaatcgtgtcaagttttcacaaaatcgtgccacgattggtcaccctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaat 5148247  T
Q  271 tgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
     || ||||||||||||| |||||||  ||||||||||||||||||| | ||||||    
T  5148248 cgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaaca 5148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 163 - 316
Target Start/End: Complemental strand, 16628506 - 16628354
Alignment:
Q  163 taacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacga 261  Q
    |||| ||||||||||||||| |||||||| |||||||| |||||| |||||||  |||||||||||| || |||||| ||  |  ||||||||| |||      
T  16628506 taacaagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaagcatgctcactgc--ctgaaaatcgtgacacat 16628409  T
Q  262 tgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||   || | || |||||||||||||||||||||  |||||||||||||||||||    
T  16628408 tgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 16628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 18860446 - 18860513
Alignment:
Q  249 aatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18860513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 45356983 - 45356861
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||| || ||||||   |||||    
T  45356983 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 45356884  T
Q  238 cggcatcacaaaatcgtgtcacga 261  Q
    ||||||| | ||||||||||||||    
T  45356883 cggcatctc-aaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 316
Target Start/End: Original strand, 3778014 - 3778164
Alignment:
Q  166 cgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    ||||||| ||||||||| |||||||| |||||||| |||||| |||||||  ||||||||||||||| |||| | || |   ||||||||| |||| ||     
T  3778014 cgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcgctgc-ttggaaaatcgtgacacgttga 3778112  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
       | | || |||||||||||||||||||||  |||||||||||||||||||    
T  3778113 tgtaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 3778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 316
Target Start/End: Complemental strand, 6743035 - 6742897
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatca 277  Q
    ||||| |||||||| |||||||| | |||| ||||||| ||||||||| ||| |||||| || | |  |||||||||| |||| ||   || | || |||    
T  6743035 aaaatcgtgtcacgttttcccaaaaacgtgccacgattaggcaccctgaaaaacagctctcgacgttgcaaaatcgtgacacgttgatgaaatcgtgtca 6742936  T
Q  278 cgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||  |||| ||||||||||||||    
T  6742935 cgatttctctgttcttccaaaccataaatttgaagccaa 6742897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 5143730 - 5143823
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccc-tgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    ||||||||||||| |||||||  |||| ||| |||||| ||||||| | ||||| |||||||||||||||| |||  |||||||||||||||||    
T  5143730 caagtttgaaaatcgtgtcacattttcacaaaatcgtgccacgattggtcacccctgcaaaccagctcacgacattgcaaaatcgtgtcacgat 5143823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 46570187 - 46570270
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    ||||||||||||||| |||||||| ||| |||||||||| ||||||||||| | |||||| || |||  |||||||||| ||||    
T  46570187 gaaaattgtgtcacgttttcccaaaatcttgtcacgattgggcaccctgcagaacagctctcgacatttcaaaatcgtgacacg 46570270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 13992600 - 13992654
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  13992600 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 13992654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 8689126 - 8689078
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  8689126 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattt 8689078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 31495608 - 31495677
Alignment:
Q  48 aactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||   |||||||||||||| |||||| ||||| ||| |||||| ||||||||||||||||    
T  31495608 aactctccttcaaat--ctgcacaagaacacttaaatattagccctccactgataaaatcgtgtcacgattt 31495677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 2209227 - 2209144
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| || ||||| |||||||||||||| ||||| ||||||| |||||| || |||  |||||||||| ||||    
T  2209227 gaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaaaacagctctcgacattgcaaaatcgtgacacg 2209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 26176067 - 26176150
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| |||||||| || |||||||| || ||||||||||||| |||||| || |||  |||||||||| ||||    
T  26176067 gaaaatcgtgtcacgttttcccaaaattgtgtcacggttgggcaccctgcaaaacagctctcgacattgcaaaatcgtgacacg 26176150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 38152066 - 38152003
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 231  Q
    |||||||||||||||||||||||| ||||||||  | ||| |||||||  ||||||||||||||    
T  38152066 agcaagtttgaaaattgtgtcacgttttcccaaatttgtgacacgattgagcaccctgcaaacc 38152003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 54882547 - 54882492
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    |||||| |||||||| |||||||| |||||||||||||| | ||||||||||||||    
T  54882547 gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaacca 54882492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 5143817 - 5143867
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  5143817 tcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 29761190 - 29761228
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagc 313  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  29761190 tcacgatttctctgttcttccagaccacaaatttgaagc 29761228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 5268741 - 5268700
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  5268741 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 5268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 5370520 - 5370605
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| |||||||||||||| | | ||||| ||| || ||| || ||| | |||||||||||||||||    
T  5370520 aaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaacatctctcgacattaccaaaatcgtgtcacgat 5370605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 8689086 - 8689045
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  8689086 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 8689045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 38151960 - 38151919
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  38151960 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 38151919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 6655463 - 6655379
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||  || ||||| |||||||||||||| | ||||||||||| || |||||||||||  |||||||||| ||||    
T  6655463 gaaaatcgtgtcacatttccccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacg 6655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 5268827 - 5268772
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctg 225  Q
    ||||||||||||| |||||||| |||||||| |||||| |||||||  ||||||||    
T  5268827 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctg 5268772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 31985390 - 31985331
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| |||||||||| ||||  |||||| ||||||| ||||||||    
T  31985390 aaaatctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgattt 31985331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 16622922 - 16622775
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    ||||||||||||||| |||||||| |||||||| || ||| ||| |||  ||||  ||||||||| ||||||  | | |  |||||||| |||| ||       
T  16622922 agcaagtttgaaaatcgtgtcacgttttcccaaaattgtgacacaattgagcacaatgcaaaccatgctcactacctga--aaatcgtgacacgttgatg 16622825  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    || | || |||||||||||||||||||||  ||||||||||| |||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaa 16622775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 56141751 - 56141713
Alignment:
Q  179 aaattgtgtcacgatttcccaagatcgtgtcacgatttg 217  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  56141751 aaatcgtgccacgatttcccaagatcgtgtcacgatttg 56141713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 3777846 - 3777875
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  3777846 acctcctttgtaatccaagtttctctctct 3777875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 5269000 - 5268971
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  5269000 acctcctttgtaatccaagtttctctctct 5268971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 5396471 - 5396442
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  5396471 acctcctttgtaatccaagtttctctctct 5396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 5429406 - 5429353
Alignment:
Q  176 tgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||| || ||||| |||||||| |||||||||||||| | |||||||||||    
T  5429406 tgaaaatcgtatcacgttttcccaaaatcgtgtcacgattagacaccctgcaaa 5429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 6743215 - 6743186
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  6743215 acctcctttgtaatccaagtttctctctct 6743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 10047678 - 10047707
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  10047678 acctcctttgtaatccaagtttctctctct 10047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 10047940 - 10047981
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||| |||||||||||  |||||||||||||||||||    
T  10047940 tcacgatttatctgttcttccaaaccacaaatttgaagccaa 10047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 16623093 - 16623064
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  16623093 acctcctttgtaatccaagtttctctctct 16623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 54867476 - 54867505
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  54867476 acctcctttgtaatccaagtttctctctct 54867505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 3e-81; HSPs: 99)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 60 - 325
Target Start/End: Complemental strand, 26928345 - 26928080
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggat 159  Q
    |||| |||||||||||||| ||||||| || ||||  |||||| |||||||||||||||   || || ||| ||||||| |||  |||||||||  | |     
T  26928345 aaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattgatacgtaagtcacaaggtacgacctgtccttatcctgaaa 26928246  T
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcac 26928146  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26928145 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 26928080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 104 - 325
Target Start/End: Original strand, 23198309 - 23198530
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagat 203  Q
    ||||||||||||||| | || |||||| ||||||| ||| ||||||||||  ||| |||||||||||||||||| |||| ||||||||||| | | | ||    
T  23198309 aatcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaat 23198408  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||    
T  23198409 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccaca 23198508  T
Q  304 aatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||||    
T  23198509 aatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 104 - 325
Target Start/End: Original strand, 23200508 - 23200729
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagat 203  Q
    ||||||||||||||| | || || ||| ||||||| ||| ||||||||||  ||| |||||||||||||||||| |||| ||||||||||| | | | ||    
T  23200508 aatcgtgtcacgattggtacgtaagtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaat 23200607  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  23200608 cgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccaca 23200707  T
Q  304 aatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||||    
T  23200708 aatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 106 - 325
Target Start/End: Original strand, 1306385 - 1306604
Alignment:
Q  106 tcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcg 205  Q
    ||||||||||||| | || |||||| ||||||| |||  |||||||||  ||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  1306385 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcg 1306484  T
Q  206 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaa 305  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||  | ||||||||||||||||||||| ||||| |||    
T  1306485 tgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccataaa 1306584  T
Q  306 tttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||    
T  1306585 tttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 8 - 268
Target Start/End: Complemental strand, 2671378 - 2671121
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||| ||||||||||||||| || ||||||| ||||||||||   |||    
T  2671378 cctcctttgtaatccaagtttctctctctaagctcttccaagctct--ttcacaaatctgcacaagaacacaatatatactagtcttcctctgaagaaat 2671281  T
Q  107 cgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgt 206  Q
    ||||||||||||||  | |||  ||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  2671280 cgtgtcacgatttg--cgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgt 2671183  T
Q  207 gtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaa 268  Q
    | |||||||||||| ||||||||| ||||||||||| |   ||||| |||||||||||||||    
T  2671182 gccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaa 2671121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 8477669 - 8477994
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||    ||||||||||| |||||||||||||||||||||  |||||    
T  8477669 cctcctctgtaatccaagtttctctctctaagctcttccaagctctcttccaaaaatgaacacaagaacacttaaatactagccttcctctgaagcaatc 8477768  T
Q  108 gtgtcacgatttgaacat-----------------acgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcac 190  Q
    ||||||||||||  | ||                 ||  ||||||||||||| |||||||||||||||||||||||||||||||||   ||| |||||||    
T  8477769 gtgtcacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcac 8477868  T
Q  191 gatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgtt 290  Q
    ||||||||||||||||| |||||||||||| || |||||| ||||||||||| | | ||||||||||||||||||||| | || |||| |||||||||||    
T  8477869 gatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgtt 8477968  T
Q  291 cttccggaccacaaatttgaagccaa 316  Q
    ||||| ||||||||||||||||||||    
T  8477969 cttccagaccacaaatttgaagccaa 8477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 33386302 - 33386136
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33386202 gatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaacac 33386136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 40372588 - 40372264
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| | ||||   ||||||||||||||| || ||||||| ||||||||||   |||    
T  40372588 cctcctttgtaatccaagtttctctctctaagctcttccaagctctcttacaaat--ctgcacaagaacacaatatatactagtcttcctctgaagaaat 40372491  T
Q  107 cgtgtcacgatttgaacata-----------------cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||||||||||||  | ||                  ||| || ||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||    
T  40372490 cgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtca 40372391  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgt 289  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||||||| | | ||||||||||||||||||||| | || |||||||||||||||    
T  40372390 cgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgt 40372291  T
Q  290 tcttccggaccacaaatttgaagccaa 316  Q
    |||||| ||||||||||||||||||||    
T  40372290 tcttccagaccacaaatttgaagccaa 40372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 146 - 325
Target Start/End: Complemental strand, 800864 - 800685
Alignment:
Q  146 tccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 245  Q
    ||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  800864 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatca 800765  T
Q  246 caaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | ||||||||||||||||||||||| || |||||||||| |||||||||| ||||||||||| |||| ||||||||||||    
T  800764 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 160 - 325
Target Start/End: Original strand, 37726134 - 37726299
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| | ||||||||||||| ||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37726134 acttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 37726233  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||  |||||| || |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  37726234 gatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 37726299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 27453416 - 27453582
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||| | ||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27453416 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcac 27453515  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    ||||||||||| || |||| ||||||||| |||| | ||||||||||||||||||||||||||||||    
T  27453516 gatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatctcaacac 27453582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 7167688 - 7167874
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  7167688 cccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 7167787  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||| |   |||| |||||||||||||||| | || ||||||||||||||||||||| || |||||||||||||||||    
T  7167788 ctagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaa 7167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 28503512 - 28503327
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  || |||||    
T  28503512 cccaaggt-tgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaa 28503414  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| | ||||||||||||||||||    
T  28503413 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 22172847 - 22172670
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    |||| |||||||||||  ||| ||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  |||||||||  ||||||    
T  22172847 tgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 22172748  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||| | | ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  22172747 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 9091093 - 9090843
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||| ||||||||||  ||||    
T  9091093 cctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagacttcctctgaagcaat 9090996  T
Q  107 cgtgtcacgattt---gaacata--------------cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||   || |||               ||| |||||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||    
T  9090995 cgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtca 9090896  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggca 242  Q
    |||||||||||||||||| |||||||| ||  ||||||||| |||||||||||    
T  9090895 cgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggca 9090843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 7782589 - 7782712
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||| |||||||||  |||||    
T  7782589 atcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagacca 7782688  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||||||||    
T  7782689 caaatttgaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 32143726 - 32143884
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagat 203  Q
    |||||||||||||||   || |||||| ||||||| |||  |||||||||  | | ||||||||||||||||||||||| ||||||||||| | ||||||    
T  32143726 aatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagat 32143825  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32143826 cgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 8738855 - 8738605
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacaca-taaatactagccttcctctgatacaat 106  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||| ||||||||||  ||||    
T  8738855 cctcctttgcaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagacttcctctgaagcaat 8738758  T
Q  107 cgtgtcacgattt---gaacata--------------cgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtca 189  Q
    |||| ||||||||   || |||               ||| |||||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||    
T  8738757 cgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtca 8738658  T
Q  190 cgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggca 242  Q
    |||||||||||||||||| |||||||| ||  ||||||||| |||||||||||    
T  8738657 cgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggca 8738605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 144 - 328
Target Start/End: Complemental strand, 54634890 - 54634707
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||  |||||| |||||||| |||||||||||   |||||||||||     
T  54634890 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacggcac 54634791  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacactt 328  Q
    | | |||||||||||| |||||||| | || |||||||||| |||||||||| |||||||||||||||| | |||||||||||||    
T  54634790 cccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacactt 54634707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 18656843 - 18657021
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagc-tca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||  |||||||||  || |||    
T  18656843 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 18656942  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| ||| ||||||||||||||||||||| | || ||| ||||||||||||||| | ||||||||||||||||||||    
T  18656943 cggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 18657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 104 - 313
Target Start/End: Complemental strand, 27352299 - 27352092
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagat 203  Q
    |||||||||||||||||  | | |||||||||||||||| |||||||||||  |||| |||||||||||||||   ||| ||||||||||||||||||||    
T  27352299 aatcgtgtcacgatttg--cgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagat 27352202  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccaca 303  Q
    |||| ||||||||||    |||||||| ||||||||||| |   ||||||||||||||||||||| | || ||||||||| ||||||||||  |||||||    
T  27352201 cgtgccacgatttggtgttctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccaca 27352102  T
Q  304 aatttgaagc 313  Q
    ||||| ||||    
T  27352101 aatttaaagc 27352092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 28501345 - 28501160
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||   ||| |||||||||||| ||||||||||| ||||||||||   ||||||||    
T  28501345 cccaaggt-tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaa 28501247  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | ||||||||||  |   ||||||||||||||||||||| | || ||||||||||||||||||||| | ||||||||||||||||||    
T  28501246 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28501160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 6716265 - 6716085
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||  |||||| |||||||| ||||||||||| | |||||||||||     
T  6716265 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6716166  T
Q  244 cacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    | | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||||| ||| | ||||||||||    
T  6716165 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagac-aatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 37408200 - 37408036
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| | ||||||||||||| |||||||||||| |  | |||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  37408200 acttaaccaacaagtttgaaaatcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcac 37408102  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||| | | || ||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  37408101 gatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 65 - 326
Target Start/End: Complemental strand, 10209036 - 10208777
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||| |||    
T  10209036 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatattta 10208939  T
Q  165 acgagcaagtttgaaaattgtgtcacga-tttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgat 262  Q
    ||||||||||||    || ||||||||| |||||||| |||||| |||||||||   |||||||| || | ||||||||||| | |||||| ||||||||    
T  10208938 acgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgat 10208840  T
Q  263 gccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
     ||||| | || ||| |||||| ||||||||||  ||||||||||||||| | |||||||||||    
T  10208839 accaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacac 10208777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 10058247 - 10058034
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  10058247 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 10058150  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10058149 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10058051  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  10058050 acaaatttgaagacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 10060469 - 10060256
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  10060469 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 10060372  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10060371 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10060273  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  10060272 acaaatttgaagacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 10062691 - 10062478
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  10062691 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 10062594  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10062593 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10062495  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  10062494 acaaatttgaagacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 10064913 - 10064700
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | |||||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  10064913 caatcgtgtcacgatttg--cgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 10064816  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10064815 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10064717  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  10064716 acaaatttgaagacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 3617253 - 3617034
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| || | |||||||||||||||||||||||||||| |  || |||||||||||| || | |    
T  3617253 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa 3617156  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||    
T  3617155 tcgtgacacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacca 3617057  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  3617056 caaatttgaagac-aatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 103 - 326
Target Start/End: Original strand, 4601108 - 4601329
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttccca-ag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||||||||||||| |     
T  4601108 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaa 4601205  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || ||||||||||||| | |||||||||| |||| ||||| | || |||||||||| ||||||||||  |||    
T  4601206 atcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaacc 4601304  T
Q  301 acaaatttgaagccaaatctcaacac 326  Q
    |||||||||||| | |||||||||||    
T  4601305 acaaatttgaagac-aatctcaacac 4601329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 27986103 - 27986001
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||||||||| ||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 27986004  T
Q  260 gat 262  Q
    |||    
T  27986003 gat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 4598887 - 4599107
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttccca-ag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||||||||||||| |     
T  4598887 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaa 4598984  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || ||||||||||||| | |||||||||| |||| ||||| | || |||||||||| ||||||||||  |||    
T  4598985 atcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaacc 4599083  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||||||| | ||||||||||    
T  4599084 acaaatttgaagac-aatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 10056025 - 10055812
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  10056025 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 10055928  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10055927 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10055829  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  10055828 acaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 103 - 317
Target Start/End: Complemental strand, 10067135 - 10066922
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||| ||||||||     
T  10067135 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaa 10067038  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    ||||||||||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10067037 atcgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10066939  T
Q  301 acaaatttgaagccaaa 317  Q
    |||||||||||| ||||    
T  10066938 acaaatttgaagacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 25637232 - 25637013
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||  |    
T  25637232 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaa 25637135  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||| | ||| | | ||||||||||||||||||| | | || |||||||||| |||||||||| |||||    
T  25637134 tcgtgccacgatttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagacca 25637036  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||| ||| | ||||||||||    
T  25637035 caaatttaaagac-aatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 1306250 - 1306360
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatc 107  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||||||||| ||||| |||||| ||||    
T  1306250 cctcctttataatccaagtttctctctctaagctcttccaagctctcc-tccaaaaactgcacaagaacacttaaatactagtcttccactgataaaatc 1306348  T
Q  108 gtgtcacgattt 119  Q
    ||||||||||||    
T  1306349 gtgtcacgattt 1306360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 6718449 - 6718331
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||  |||||| |||||||| ||||||||||| | |||||||||||     
T  6718449 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6718350  T
Q  244 cacaaaatcgtgtcacgat 262  Q
    | | |||||||||||||||    
T  6718349 cccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 10211198 - 10210978
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || |||||| || ||||||||     
T  10211198 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaa 10211101  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| |||||||||   |||||||| || | ||||||||||| | |||||| |||||||| ||||| | || |||||||||| ||||||||||  |||    
T  10211100 atcgtgccacgatttgcacccctgcaaccctaactcacggcatc-ctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaacc 10211002  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||| ||| | ||||||||||    
T  10211001 acaaatttaaagac-aatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 45282746 - 45282628
Alignment:
Q  144 agtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 243  Q
    ||||||||||||||||||||||||||||||||| |  || |||||||||||| || | |||||||||||| || ||||||||||| | |||||||||||     
T  45282746 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcac 45282647  T
Q  244 cacaaaatcgtgtcacgat 262  Q
    | | |||||||||||||||    
T  45282646 cccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 139 - 318
Target Start/End: Complemental strand, 2672604 - 2672425
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   ||||     
T  2672604 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcc 2672505  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    ||||||| |   |||||||||||||  |||| | ||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  2672504 cggcatctc-cgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 27974577 - 27974477
Alignment:
Q  162 ttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacga 261  Q
    ||||| |||||||||||||||  ||||| |||||  ||  |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  27974577 ttaaccagcaagtttgaaaatcatgtcaagatttaacacaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacga 27974478  T
Q  262 t 262  Q
    |    
T  27974477 t 27974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 28503655 - 28503542
Alignment:
Q  8 cctcctttgtaatccaagtt---tctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatac 103  Q
    |||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||  |||||||||||| ||| ||||||| ||||||||||  |    
T  28503655 cctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaatatatactagtcttcctctgaagc 28503558  T
Q  104 aatcgtgtcacgattt 119  Q
    ||||||| ||||||||    
T  28503557 aatcgtgccacgattt 28503542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 21711669 - 21711817
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||  |||||||| |||||| |||||| || |   ||||||||| |||| ||       
T  21711669 agcaagtttgaaaattgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgaaaaccatgctcactgcct-ggaaaatcgtgacacgttgaag 21711767  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    || | || |||||||||||||||||||||  |||||||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 28501488 - 28501375
Alignment:
Q  8 cctcctttgtaatccaagtt---tctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctgatac 103  Q
    |||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||  ||||||| |||| ||| ||||||| ||||||||||  |    
T  28501488 cctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaa--gcacaagtacacaatatatactagtcttcctctgaagc 28501391  T
Q  104 aatcgtgtcacgattt 119  Q
    ||||||| ||||||||    
T  28501390 aatcgtgccacgattt 28501375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 318
Target Start/End: Complemental strand, 2676760 - 2676581
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  ||| |||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||  || ||||||   ||||     
T  2676760 tgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcc 2676661  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    || |||| |   |||||||||||||  |||| | ||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  2676660 cgacatctc-cgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 7782513 - 7782603
Alignment:
Q  105 atcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgattt 195  Q
    |||||||||||||| | || | |||||||||| | ||| ||||||||||| ||| |||||||||||||||||| |||| ||||||||||||    
T  7782513 atcgtgtcacgattggtacgttcgtcccaaggcacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 7782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 32475885 - 32475963
Alignment:
Q  138 atgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    ||||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||||||||||||    
T  32475885 atgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 32475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 32480743 - 32480821
Alignment:
Q  138 atgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    ||||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||||||||||||    
T  32480743 atgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 32480821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 36029561 - 36029708
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    ||||||||||||||| |||||||| ||| |||| |||||| |||||||  ||||||||||||||| | || | ||  |  ||||||||| |||| ||  |    
T  36029561 agcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattaagcaccctgcaaaccatgttcgctgc--ctgaaaatcgtgacacgttgata 36029658  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    || | || |||||||||||||||||||||  |||||||||||||||||||    
T  36029659 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 36029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 7167550 - 7167641
Alignment:
Q  8 cctcctttgtaatccaagtttctctctctaagctcttccaaactctccttcaaaaaactgcacaagaacac-ataaatactagccttcctctga 100  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||   ||  ||| |||||||||||||| ||| ||||||| ||||||||||    
T  7167550 cctcctttgttatccaagtttctctctctaagctcttccaagctct--atcccaaatctgcacaagaacacaatatatactagtcttcctctga 7167641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 30709414 - 30709267
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    |||||||||||||||||||||||| |||| ||| |||||| |||||||   |||||||||||||| ||||||   | |  ||||| ||| |||| ||       
T  30709414 agcaagtttgaaaattgtgtcacgttttctcaaaatcgtgacacgattgaacaccctgcaaaccatgctcac--tacctgaaaattgtgacacgttgatg 30709317  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    || | || |||||||||||||||||||||  |||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 30709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 32143878 - 32143928
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  32143878 tcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 8512642 - 8512719
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  8512642 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8512719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 8517522 - 8517599
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  8517522 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 27027174 - 27027318
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgcca 266  Q
    ||||||||||||||| |||||||| |||||||| |||||| |||||||  |||| |||||||||| |||||| || |    ||||||||| ||| ||       
T  27027174 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaaaccatgctcactgcct-gggaaatcgtgttacgttgatg 27027272  T
Q  267 aatttgtatcacgatttctctgttcttccggaccacaaatttgaag 312  Q
    || | || |||||||||||||||||||||  |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 312
Target Start/End: Complemental strand, 40734228 - 40734087
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaa 268  Q
    ||||||||||||| |||||||| |||||||| |||||| |||||||  ||||||||||||||| |||||| || |    |||||||| || | ||   ||    
T  40734228 caagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgctt--ggaaatcgtgacatgttgatgaa 40734131  T
Q  269 tttgtatcacgatttctctgttcttccggaccacaaatttgaag 312  Q
     | || |||||||||||||||||||||  |||||||||||||||    
T  40734130 atcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 40735161 - 40735097
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    ||||||||||||||| |||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  40735161 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 40735097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 23198246 - 23198305
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  23198246 aaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt 23198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 27974483 - 27974432
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacac 326  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  27974483 tcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacac 27974432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 7782454 - 7782508
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  7782454 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt 7782508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 5258589 - 5258674
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| |||||||||||||| | | || || |||||||||| || ||| | |||||||||||||||||    
T  5258589 aaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccttgaaaaccagctctcgacattaccaaaatcgtgtcacgat 5258674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 8738591 - 8738550
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  8738591 tcacgatttctctgttcttccagaccacaaatttgaagccaa 8738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 9090829 - 9090788
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  9090829 tcacgatttctctgttcttccagaccacaaatttgaagccaa 9090788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 24968519 - 24968596
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  24968519 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24968596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 8370108 - 8370044
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    ||||| ||||||||| |||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  8370108 agcaattttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 8370044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 16264820 - 16264880
Alignment:
Q  172 agtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    ||||||||||| |||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  16264820 agtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 16264880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 325
Target Start/End: Original strand, 27038511 - 27038666
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaa 268  Q
    ||||||||||||| |||||||  |||||||| |||||| || ||||  ||||||||||||||| |||||| || |    ||||||||||||| ||   ||    
T  27038511 caagtttgaaaatcgtgtcacattttcccaaaatcgtgacatgattgagcaccctgcaaaccatgctcactgcct-gggaaatcgtgtcacgttgatgaa 27038609  T
Q  269 tttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
     | || |||||||||||||||| ||||  |||||||| |||||||||| | ||||||    
T  27038610 atcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaaca 27038666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 49200112 - 49200196
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| || ||||| |||||||||||||| | ||||||||||| || |||||||||||  |||||||||| ||||    
T  49200112 gaaaatcgtgtcacgtttccccaacatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacg 49200196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 4598829 - 4598883
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  4598829 ctgcacaagaacacttaagtactagtcttcctctgtttcaatcgtgtcacgattt 4598883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 4601050 - 4601104
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  4601050 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 4601104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 1730958 - 1730917
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  1730958 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 1730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 24694764 - 24694656
Alignment:
Q  210 acgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttcc-ggaccacaaatt 307  Q
    |||||| | ||||||||||| || ||||||| |||  |||||||||| |||| ||   || | ||||||||||||||||||||||||   ||||||||||    
T  24694764 acgattggacaccctgcaaaacatgctcacgacattgcaaaatcgtgacacgttgatgaaatcgtatcacgatttctctgttcttccaaaaccacaaatt 24694665  T
Q  308 tgaagccaa 316  Q
    |||||||||    
T  24694664 tgaagccaa 24694656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 325
Target Start/End: Complemental strand, 39032174 - 39032017
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgc-aaacca-gctcacggcatcacaaaatcgtgtcacgatgcc 265  Q
    ||||||||||||||| |||||||  |||||||| |||||| |||||||  ||||||||  |||||| |||| | || | |  |||||||| |||| ||      
T  39032174 agcaagtttgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgagaaaccatgctccctgcctga--aaatcgtgacacgttgat 39032077  T
Q  266 aaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
     || | || |||||||||||||||||||||  || |||||||||||||||| | ||||||    
T  39032076 gaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 47923521 - 47923457
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    ||||||||||||||| |||||||| |||||||| |  ||| |||||||  |||||||||||||||    
T  47923521 agcaagtttgaaaatcgtgtcacgttttcccaaaaatgtgacacgattgagcaccctgcaaacca 47923457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 51398551 - 51398499
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||||||||| |||||||| |||||||||| ||| | |||||||||||    
T  51398551 gaaaattgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaa 51398499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 6096261 - 6096316
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca 232  Q
    |||||| |||||||| |||||||| |||||||||| ||| | ||||||||||||||    
T  6096261 gaaaatcgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaacca 6096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 6794504 - 6794473
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  6794504 acctcctttgtaatccaagtttctctctctaa 6794473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 23200445 - 23200504
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||| ||||| ||||||| || ||||| |||||| ||||||||||||||||    
T  23200445 aaaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgattt 23200504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 27453298 - 27453357
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||||||||||||||| |||| ||||| ||||  |||||| ||||||| ||||||||    
T  27453298 aaaaactgcacaagaacacttaaaaactagtcttcaactgataaaatcgtgccacgattt 27453357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 29812787 - 29812736
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  29812787 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 29812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 32143663 - 32143722
Alignment:
Q  60 aaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||| |||||||||||||| ||||||| || ||||  |||||| ||||||||||||||||    
T  32143663 aaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt 32143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 35925960 - 35926105
Alignment:
Q  170 caagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaa 268  Q
    ||||||||||||| |||||||| |||| |||  ||||| |||||||  ||||||||||||||| |||||| || |    |||||||| |||| ||   ||    
T  35925960 caagtttgaaaatcgtgtcacgttttctcaaactcgtgacacgattgagcaccctgcaaaccatgctcactgcct-gggaaatcgtgacacgttgatgaa 35926058  T
Q  269 tttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
     | || |||||||||||||||||||||  ||| |||||||||||||||    
T  35926059 atcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaa 35926105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 37466592 - 37466623
Alignment:
Q  7 acctcctttgtaatccaagtttctctctctaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  37466592 acctcctttgtaatccaagtttctctctctaa 37466623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 800977 - 800910
Alignment:
Q  50 ctctccttcaaaaaactgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||| |  ||||||||||||| |||||| ||||| ||  |||||| ||||||||||||||||    
T  800977 ctctccttcaaata--tgcacaagaacacttaaatattagccctctactgataaaatcgtgtcacgattt 800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 36018369 - 36018331
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatt 215  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  36018369 gaaaattgtgtcacgttttcccaaaatcgtgtcacgatt 36018331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 40845229 - 40845283
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaacacttt 329  Q
    |||||||||||||||||| ||  | || |||||||||| ||||||||||||||||    
T  40845229 tcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaacacttt 40845283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 54634986 - 54634933
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| | | |||||||||||||||| | |||||||||||||||||    
T  54634986 ctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattt 54634933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 1736093 - 1736064
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  1736093 acctcctttgtaatccaagtttctctctct 1736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 3393330 - 3393293
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatt 215  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  3393330 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 3393293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 8370278 - 8370249
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  8370278 acctcctttgtaatccaagtttctctctct 8370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 16264904 - 16264945
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||| ||||||||||  |||||||||||||||||||    
T  16264904 tcacgatttcgctgttcttccaaaccacaaatttgaagccaa 16264945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 27974741 - 27974712
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  27974741 acctcctttgtaatccaagtttctctctct 27974712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 28503549 - 28503520
Alignment:
Q  188 cacgatttcccaagatcgtgtcacgatttg 217  Q
    ||||||||||||||||||||||||||||||    
T  28503549 cacgatttcccaagatcgtgtcacgatttg 28503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 39032344 - 39032315
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  39032344 acctcctttgtaatccaagtttctctctct 39032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 40592294 - 40592253
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  40592294 tcacgatttctccgttcttccaaaccacaaatttgaagccaa 40592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 40592571 - 40592542
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  40592571 acctcctttgtaatccaagtttctctctct 40592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 45094887 - 45094803
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgat 262  Q
    ||||| ||||||||||||||||| || ||||||||||| | | ||||| ||| |||||| || ||| | |||||||||||||||||    
T  45094887 aaaatcgtgtcacgatttcccaaaattgtgtcacgattggacgccctg-aaaacagctctcgacattaccaaaatcgtgtcacgat 45094803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 47923693 - 47923664
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  47923693 acctcctttgtaatccaagtttctctctct 47923664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 153; Significance: 1e-80; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 65 - 325
Target Start/End: Complemental strand, 22199 - 21939
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatactta 164  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| | || |||||| ||||||| |||  ||||||||||  ||||||||    
T  22199 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcagtgatactta 22100  T
Q  165 acgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgc 264  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| | | |||||||||||||||||    
T  22099 acgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgc 22000  T
Q  265 caaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||  | || |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  21999 caaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 11065 - 10981
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||  || ||||| |||||||||||||| | ||||||||||| || |||||||||||  |||||||||| ||||    
T  11065 gaaaatcgtgtcacatttccccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacg 10981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 104 - 288
Target Start/End: Complemental strand, 703 - 519
Alignment:
Q  104 aatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagat 203  Q
    ||||||||||| ||| | || |||||| ||||||| ||| ||||| ||||  ||| ||||||||||||| ||||||||| ||||||||||| | ||||||    
T  703 aatcgtgtcacaattggtacgtacgtcacaaggtacgaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagat 604  T
Q  204 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctg 288  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  603 cgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 806 - 724
Alignment:
Q  21 ccaagtttctctctcta--agctcttccaaactctccttcaaaaaactgcacaagaacacataaatactagccttcctctgata 102  Q
    ||||||||||||||||   ||||| ||||| ||||||| |||||  |||||||||||||| |||||||||| ||||| ||||||    
T  806 ccaagtttctctctcttctagctcatccaagctctcctccaaaat-ctgcacaagaacacttaaatactagtcttccactgata 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 105; Significance: 5e-52; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 8034 - 7910
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | |||||    
T  8034 atcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacca 7935  T
Q  302 caaatttgaagccaaatctcaacac 326  Q
    |||||||||||||||||||||||||    
T  7934 caaatttgaagccaaatctcaacac 7910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 94; Significance: 2e-45; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 132917 - 132752
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| |||||||||||||||  |||||||||| | ||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||    
T  132917 acttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccac 132818  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||| ||| | | || |||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  132817 gataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 6260 - 6301
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  6260 tcacgatttctctgttcttccaaaccacaaatttgaagccaa 6301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 3072 - 3109
Alignment:
Q  279 gatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||||||  |||||||||||||||||||    
T  3072 gatttctctgttcttccaaaccacaaatttgaagccaa 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 3522 - 3345
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 238  Q
    ||||||||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  ||| ||||| |||||||    
T  3522 tgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcac 3423  T
Q  239 ggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||  |   |||||||||||||||| |||| | || ||||||||||||| ||||||| ||||||||||||||||||||    
T  3422 ggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 103 - 327
Target Start/End: Original strand, 2966 - 3187
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||| |||||||||||||||||||    || ||||||||||||||||  |    
T  2966 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaa 3063  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||||| | ||||||||||||||| ||||| | || |||||||||| |||||||||| |||||    
T  3064 tcgtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagacca 3162  T
Q  302 caaatttgaagccaaatctcaacact 327  Q
    ||||||||||| | ||||||||||||    
T  3163 caaatttgaagac-aatctcaacact 3187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 2908 - 2962
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  2908 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 2962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 34747 - 34562
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||||  | ||||||    
T  34747 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaa 34649  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    | | || |||||  |   |||| |||||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  34648 caaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 83; Significance: 7e-39; HSPs: 5)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 43599 - 43441
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| |||||||||||||||  |||||||||||| ||| |||||  ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcac 43500  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaat 318  Q
    ||||||| | | || ||||||||||||| |||||||  |||| ||||||||||||||||    
T  43499 gatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaat 43441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 36462 - 36376
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgt 254  Q
    |||||||||||||||||||||||| |||| ||| |||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  36462 agcaagtttgaaaattgtgtcacgttttcacaaaatcgtgccacgatttgacaccctgcaaaccagctcacgacattacaaaatcgt 36376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 36377 - 36324
Alignment:
Q  272 gtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||| |||||||||||||||||  ||||||||||||||||||| | ||||||    
T  36377 gtatcatgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 36324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 36632 - 36603
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  36632 acctcctttgtaatccaagtttctctctct 36603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 43761 - 43732
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  43761 acctcctttgtaatccaagtttctctctct 43732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 1248 - 1083
Alignment:
Q  160 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 259  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||| |||||  ||||||||| |||||||||||||| ||||||  || |||||||||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcac 1149  T
Q  260 gatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    ||||||||| | || ||||||||| ||||||||| |  ||||||||||||||| ||||| ||||||    
T  1148 gatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 103 - 325
Target Start/End: Original strand, 4091 - 4310
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaaga 202  Q
    |||| |||||||||||||  | | |||||||||| | ||| |||||||||||||||||||||||||||||||||    || ||||||||||||||||  |    
T  4091 caattgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaa 4188  T
Q  203 tcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacca 301  Q
    ||||| |||||||||   |||||||| || ||||||||||| |  |||||||||||||||| ||||| | ||  ||||||||| |||||||||| |||||    
T  4189 tcgtgccacgatttgcacccctgcaaccctagctcacggca-cctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagacca 4287  T
Q  302 caaatttgaagccaaatctcaaca 325  Q
    ||||||||||| | ||||||||||    
T  4288 caaatttgaagac-aatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 4033 - 4087
Alignment:
Q  65 ctgcacaagaacacataaatactagccttcctctgatacaatcgtgtcacgattt 119  Q
    ||||||| |||||| ||| |||||| ||||||||| | |||||||||||||||||    
T  4033 ctgcacaggaacacttaagtactagtcttcctctgttccaatcgtgtcacgattt 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 760 - 937
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctca 237  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||| ||| || ||||||   |||||    
T  760 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 859  T
Q  238 cggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||| | |  |||||||||||||| ||||| | || |||||||||||||||||||||  |||||||||||||||||||    
T  860 cggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 103 - 325
Target Start/End: Complemental strand, 6079 - 5859
Alignment:
Q  103 caatcgtgtcacgatttgaacatacgtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacga-tttcccaag 201  Q
    ||||||||||||||||||  | | |||||||||| | ||| ||||||||||||||||||||||||||||||||| |  || ||||||||| ||| |||      
T  6079 caatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccaca 5982  T
Q  202 atcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggacc 300  Q
    |||||| ||||| || ||||||||||| || ||||||||||| | |  |||||||||||||  ||||| | ||  ||||||||| |||||||||| ||||    
T  5981 atcgtgacacgaatttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagacc 5883  T
Q  301 acaaatttgaagccaaatctcaaca 325  Q
    |||||||||||| | ||||||||||    
T  5882 acaaatttgaagac-aatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 130 - 262
Target Start/End: Original strand, 8099 - 8230
Alignment:
Q  130 cccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 229  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||   ||| |||||||||||| ||||||||||| |||||||||||  ||||||||    
T  8099 cccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaa 8197  T
Q  230 ccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    | ||||||||||  |   |||||||||||||||    
T  8198 ctagctcacggccacttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 8224 - 8265
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  8224 tcacgatttctctgttcttccagaccacaaatttgaagccaa 8265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 3e-22; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 45666 - 45760
Alignment:
Q  168 agcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 262  Q
    ||||||||||||||| ||||||||||||| ||  |||||| ||||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||    
T  45666 agcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaatcagctcacgacattacaaaattgtgtcacgat 45760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 45754 - 45804
Alignment:
Q  275 tcacgatttctctgttcttccggaccacaaatttgaagccaaatctcaaca 325  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  45754 tcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 45496 - 45525
Alignment:
Q  7 acctcctttgtaatccaagtttctctctct 36  Q
    ||||||||||||||||||||||||||||||    
T  45496 acctcctttgtaatccaagtttctctctct 45525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 1784 - 1717
Alignment:
Q  249 aatcgtgtcacgatgccaaatttgtatcacgatttctctgttcttccggaccacaaatttgaagccaa 316  Q
    |||||||||||||| ||||| | || ||||||||||||||||||||| ||||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 13969 - 13892
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  13969 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 13892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 18850 - 18772
Alignment:
Q  138 atgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    ||||| |||| ||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  18850 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattt 18772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 176635 - 176558
Alignment:
Q  139 tgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||| |||||||||||  |||||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  176635 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 176558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 1934 - 1847
Alignment:
Q  128 gtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||||||||| |||| |||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  1934 gtcccaaggt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 148639 - 148552
Alignment:
Q  128 gtcccaaggtatgactagtccttatcaaggatacttaacgagcaagtttgaaaattgtgtcacgatttcccaagatcgtgtcacgattt 216  Q
    |||||||||| |||| |||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||||||||| ||||||||    
T  148639 gtcccaaggt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 148552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 20858 - 20942
Alignment:
Q  177 gaaaattgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacg 260  Q
    |||||| |||||||| |||||||| ||||||||| |||| | ||||||||||| || ||||||| |||  |||||||||| ||||    
T  20858 gaaaatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccctgcaaaacatgctcacgacattgcaaaatcgtgacacg 20942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 6830 - 6750
Alignment:
Q  202 atcgtgtcacgatttggcaccctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaatttgtatcacgatt 282  Q
    |||||||||||||| | |||||||||||||| |||||| || | | ||||||||| |||||||||||| | || ||||||||    
T  6830 atcgtgtcacgattggacaccctgcaaaccatgctcactgcct-agaaaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 434255 - 434218
Alignment:
Q  178 aaaattgtgtcacgatttcccaagatcgtgtcacgatt 215  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  434255 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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