View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5360-Insertion-7 (Length: 281)

Name: NF5360-Insertion-7
Description: NF5360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5360-Insertion-7
NF5360-Insertion-7
[»] chr5 (55 HSPs)
chr5 (159-278)||(41410892-41411010)
chr5 (159-278)||(1831064-1831182)
chr5 (156-270)||(30352025-30352139)
chr5 (159-278)||(40316531-40316649)
chr5 (159-278)||(14639661-14639780)
chr5 (8-137)||(20517240-20517366)
chr5 (157-278)||(40365834-40365958)
chr5 (158-278)||(26802047-26802166)
chr5 (158-278)||(26809597-26809716)
chr5 (158-278)||(26824624-26824743)
chr5 (203-270)||(40797026-40797093)
chr5 (203-278)||(1098218-1098293)
chr5 (203-278)||(13548256-13548331)
chr5 (203-278)||(20022903-20022978)
chr5 (203-278)||(20040361-20040436)
chr5 (203-278)||(41263075-41263150)
chr5 (203-278)||(1781091-1781166)
chr5 (203-278)||(19344645-19344720)
chr5 (203-278)||(30211687-30211762)
chr5 (203-278)||(14057751-14057826)
chr5 (203-270)||(14633050-14633117)
chr5 (203-278)||(20502994-20503069)
chr5 (203-278)||(30721631-30721706)
chr5 (203-278)||(30788248-30788323)
chr5 (203-278)||(31191123-31191198)
chr5 (203-270)||(33402545-33402612)
chr5 (203-278)||(40316861-40316936)
chr5 (203-278)||(41410605-41410680)
chr5 (203-277)||(40080024-40080098)
chr5 (203-270)||(2551581-2551648)
chr5 (203-278)||(9936834-9936909)
chr5 (203-278)||(14607503-14607578)
chr5 (203-278)||(27674260-27674335)
chr5 (225-270)||(5985004-5985049)
chr5 (203-278)||(2799674-2799750)
chr5 (203-278)||(1831394-1831469)
chr5 (219-278)||(27477684-27477743)
chr5 (203-270)||(27675583-27675650)
chr5 (219-270)||(28142987-28143038)
chr5 (203-270)||(32473976-32474043)
chr5 (219-278)||(34169888-34169947)
chr5 (203-278)||(41042783-41042858)
chr5 (203-278)||(967235-967312)
chr5 (220-270)||(25946190-25946240)
chr5 (229-270)||(39104233-39104274)
chr5 (203-278)||(2805840-2805916)
chr5 (203-259)||(8627178-8627234)
chr5 (203-278)||(39925246-39925322)
chr5 (203-278)||(6734824-6734899)
chr5 (203-270)||(10465249-10465316)
chr5 (203-253)||(32110643-32110693)
chr5 (219-269)||(35641828-35641878)
chr5 (229-278)||(4152256-4152305)
chr5 (219-275)||(1918779-1918835)
chr5 (203-275)||(39035603-39035675)
[»] chr8 (55 HSPs)
chr8 (158-278)||(29708559-29708679)
chr8 (165-278)||(32909060-32909173)
chr8 (164-278)||(14511844-14511958)
chr8 (159-278)||(42150093-42150212)
chr8 (203-278)||(25691540-25691615)
chr8 (203-278)||(30464475-30464550)
chr8 (203-270)||(20671299-20671366)
chr8 (203-278)||(38842206-38842281)
chr8 (204-278)||(43184722-43184796)
chr8 (225-270)||(38036809-38036854)
chr8 (203-275)||(25009187-25009259)
chr8 (203-278)||(4960194-4960269)
chr8 (203-278)||(5777497-5777572)
chr8 (203-270)||(8496837-8496904)
chr8 (219-278)||(13888573-13888632)
chr8 (203-278)||(14378629-14378704)
chr8 (203-278)||(21132871-21132946)
chr8 (203-278)||(23437756-23437831)
chr8 (203-270)||(29917879-29917946)
chr8 (203-278)||(30653403-30653478)
chr8 (203-278)||(36632136-36632211)
chr8 (203-278)||(44887658-44887733)
chr8 (208-270)||(1645357-1645419)
chr8 (203-278)||(11756819-11756896)
chr8 (203-275)||(3466326-3466398)
chr8 (203-275)||(4327065-4327137)
chr8 (203-270)||(37094175-37094242)
chr8 (219-281)||(9615582-9615644)
chr8 (205-278)||(25118831-25118904)
chr8 (229-278)||(27301931-27301980)
chr8 (229-278)||(44039894-44039943)
chr8 (203-275)||(29616272-29616344)
chr8 (203-259)||(40645652-40645708)
chr8 (203-270)||(761593-761660)
chr8 (203-278)||(15870218-15870293)
chr8 (203-270)||(18419041-18419108)
chr8 (203-278)||(23547111-23547186)
chr8 (203-270)||(43049220-43049287)
chr8 (225-270)||(7603372-7603417)
chr8 (205-270)||(17523850-17523915)
chr8 (230-270)||(7431270-7431310)
chr8 (238-278)||(44871409-44871449)
chr8 (203-278)||(2026615-2026690)
chr8 (203-270)||(40035330-40035397)
chr8 (229-275)||(8058970-8059016)
chr8 (157-195)||(38036869-38036907)
chr8 (241-278)||(8123719-8123756)
chr8 (229-270)||(26627971-26628012)
chr8 (229-270)||(35584125-35584166)
chr8 (229-270)||(42786049-42786090)
chr8 (229-278)||(44947086-44947135)
chr8 (229-269)||(9459244-9459284)
chr8 (219-259)||(10535957-10535997)
chr8 (238-278)||(16345255-16345295)
chr8 (242-278)||(21133014-21133050)
[»] chr4 (48 HSPs)
chr4 (158-266)||(17492667-17492775)
chr4 (203-278)||(13848917-13848992)
chr4 (160-278)||(2806116-2806234)
chr4 (158-278)||(1615537-1615657)
chr4 (159-278)||(11260710-11260820)
chr4 (203-278)||(24505554-24505629)
chr4 (156-278)||(48079993-48080115)
chr4 (203-278)||(10384891-10384966)
chr4 (203-278)||(31152704-31152779)
chr4 (203-278)||(43447208-43447283)
chr4 (203-278)||(1613163-1613238)
chr4 (203-278)||(28914411-28914486)
chr4 (203-278)||(37164059-37164134)
chr4 (203-278)||(43047430-43047505)
chr4 (203-278)||(46608256-46608331)
chr4 (203-275)||(47834092-47834164)
chr4 (210-278)||(53987725-53987793)
chr4 (203-270)||(3708296-3708363)
chr4 (203-278)||(4271959-4272034)
chr4 (203-278)||(8525361-8525436)
chr4 (203-278)||(33394120-33394195)
chr4 (203-278)||(39171001-39171076)
chr4 (203-278)||(55631820-55631895)
chr4 (203-278)||(40411553-40411629)
chr4 (203-270)||(31657309-31657376)
chr4 (203-278)||(37667719-37667794)
chr4 (203-278)||(39260395-39260470)
chr4 (203-278)||(50684963-50685038)
chr4 (203-269)||(42185317-42185383)
chr4 (205-259)||(48380518-48380572)
chr4 (203-278)||(1981326-1981402)
chr4 (203-270)||(6520478-6520545)
chr4 (203-270)||(28909793-28909860)
chr4 (203-270)||(39332783-39332850)
chr4 (229-275)||(18881305-18881351)
chr4 (225-278)||(38715626-38715678)
chr4 (205-270)||(39195535-39195600)
chr4 (203-259)||(1377546-1377602)
chr4 (203-255)||(29821093-29821145)
chr4 (219-270)||(14958150-14958201)
chr4 (203-270)||(23605855-23605922)
chr4 (219-270)||(29844277-29844328)
chr4 (240-274)||(6234858-6234892)
chr4 (219-269)||(44210208-44210258)
chr4 (229-278)||(1348727-1348776)
chr4 (229-270)||(36662652-36662693)
chr4 (203-259)||(48336394-48336448)
chr4 (225-281)||(48336621-48336677)
[»] scaffold0172 (1 HSPs)
scaffold0172 (159-278)||(19681-19800)
[»] chr6 (33 HSPs)
chr6 (156-278)||(2912893-2913015)
chr6 (203-278)||(16661552-16661627)
chr6 (203-278)||(24798496-24798571)
chr6 (203-278)||(24825208-24825283)
chr6 (203-278)||(30699304-30699379)
chr6 (203-278)||(2141611-2141686)
chr6 (203-278)||(2397813-2397888)
chr6 (203-278)||(2656620-2656695)
chr6 (203-278)||(4890076-4890151)
chr6 (203-278)||(6142457-6142532)
chr6 (203-278)||(29514976-29515051)
chr6 (203-278)||(32541427-32541502)
chr6 (203-278)||(2667275-2667350)
chr6 (203-278)||(9022883-9022958)
chr6 (203-278)||(10105854-10105929)
chr6 (203-270)||(31708936-31709003)
chr6 (203-265)||(17496281-17496343)
chr6 (203-278)||(995606-995681)
chr6 (203-278)||(6188606-6188681)
chr6 (203-278)||(10109361-10109436)
chr6 (203-278)||(28483081-28483155)
chr6 (203-278)||(29795494-29795568)
chr6 (203-278)||(16969421-16969496)
chr6 (203-270)||(17417672-17417739)
chr6 (203-278)||(32673791-32673866)
chr6 (219-269)||(16434602-16434652)
chr6 (225-278)||(16120824-16120877)
chr6 (205-270)||(19788623-19788688)
chr6 (229-270)||(24693207-24693248)
chr6 (203-264)||(35117323-35117384)
chr6 (229-269)||(12869373-12869413)
chr6 (232-278)||(17179348-17179394)
chr6 (158-195)||(1870532-1870569)
[»] chr7 (42 HSPs)
chr7 (159-278)||(41844767-41844887)
chr7 (159-278)||(29247626-29247745)
chr7 (203-278)||(48448561-48448636)
chr7 (203-278)||(9173282-9173357)
chr7 (203-278)||(16807092-16807167)
chr7 (203-278)||(31496591-31496666)
chr7 (203-278)||(38069094-38069169)
chr7 (203-278)||(38850745-38850820)
chr7 (203-278)||(33376818-33376893)
chr7 (203-278)||(25273963-25274038)
chr7 (203-270)||(28016158-28016225)
chr7 (203-278)||(30462167-30462242)
chr7 (203-278)||(35693776-35693851)
chr7 (203-278)||(37100972-37101047)
chr7 (203-270)||(47713386-47713453)
chr7 (203-278)||(3124092-3124167)
chr7 (219-278)||(26651155-26651214)
chr7 (203-270)||(32222593-32222660)
chr7 (203-278)||(40231971-40232046)
chr7 (203-278)||(41007902-41007977)
chr7 (229-278)||(35265767-35265816)
chr7 (229-278)||(38353544-38353593)
chr7 (203-267)||(38441856-38441920)
chr7 (219-278)||(4088782-4088841)
chr7 (227-278)||(26190311-26190362)
chr7 (219-269)||(23348415-23348465)
chr7 (207-265)||(42493564-42493622)
chr7 (203-278)||(46242424-46242501)
chr7 (229-270)||(38198632-38198673)
chr7 (229-270)||(40348558-40348599)
chr7 (206-270)||(4033439-4033503)
chr7 (207-259)||(7314310-7314362)
chr7 (203-259)||(40818662-40818718)
chr7 (203-270)||(4620110-4620176)
chr7 (228-278)||(7461002-7461052)
chr7 (228-278)||(36404872-36404922)
chr7 (228-278)||(47080685-47080735)
chr7 (229-278)||(5842186-5842235)
chr7 (229-270)||(23734239-23734280)
chr7 (229-270)||(14201528-14201571)
chr7 (203-259)||(18756642-18756698)
chr7 (219-270)||(29255303-29255352)
[»] scaffold0195 (1 HSPs)
scaffold0195 (159-278)||(191-310)
[»] chr2 (42 HSPs)
chr2 (157-278)||(9273351-9273471)
chr2 (203-278)||(1749117-1749192)
chr2 (163-278)||(7601342-7601457)
chr2 (213-278)||(20917872-20917937)
chr2 (203-278)||(7724556-7724631)
chr2 (203-278)||(8373477-8373552)
chr2 (203-278)||(12209032-12209107)
chr2 (203-278)||(16126027-16126102)
chr2 (203-278)||(38963838-38963913)
chr2 (203-278)||(41436875-41436950)
chr2 (203-278)||(8896314-8896389)
chr2 (203-278)||(10333523-10333598)
chr2 (203-278)||(16127725-16127800)
chr2 (203-278)||(16333523-16333598)
chr2 (203-278)||(2831750-2831825)
chr2 (203-278)||(18504515-18504590)
chr2 (203-270)||(31603369-31603436)
chr2 (203-270)||(43328754-43328821)
chr2 (203-278)||(45036406-45036481)
chr2 (229-278)||(4137478-4137527)
chr2 (213-278)||(15177422-15177487)
chr2 (203-278)||(5096291-5096366)
chr2 (207-278)||(5861510-5861581)
chr2 (203-270)||(6730056-6730123)
chr2 (203-270)||(22718496-22718563)
chr2 (203-278)||(40471779-40471854)
chr2 (203-278)||(41575605-41575680)
chr2 (219-268)||(32776160-32776209)
chr2 (221-270)||(37806843-37806892)
chr2 (203-276)||(44022311-44022384)
chr2 (203-275)||(37987884-37987956)
chr2 (227-270)||(5030351-5030394)
chr2 (203-278)||(6075168-6075243)
chr2 (227-278)||(15771027-15771078)
chr2 (203-270)||(16646289-16646356)
chr2 (227-270)||(25277886-25277929)
chr2 (203-278)||(37316919-37316994)
chr2 (220-270)||(13399165-13399215)
chr2 (240-274)||(21271787-21271821)
chr2 (229-275)||(25762263-25762309)
chr2 (229-278)||(11383990-11384039)
chr2 (241-278)||(41319869-41319906)
[»] chr1 (45 HSPs)
chr1 (159-278)||(5117384-5117503)
chr1 (159-278)||(44963622-44963741)
chr1 (203-278)||(26476959-26477034)
chr1 (203-278)||(5606341-5606416)
chr1 (203-278)||(10100463-10100538)
chr1 (203-278)||(1821578-1821653)
chr1 (203-278)||(6017399-6017474)
chr1 (203-278)||(7075280-7075355)
chr1 (203-278)||(10124152-10124227)
chr1 (203-278)||(26543911-26543986)
chr1 (203-278)||(45299361-45299436)
chr1 (203-278)||(5945808-5945883)
chr1 (203-278)||(43453115-43453190)
chr1 (203-278)||(44452238-44452313)
chr1 (203-278)||(44741386-44741461)
chr1 (203-278)||(49903635-49903710)
chr1 (203-278)||(52749324-52749399)
chr1 (203-278)||(40058917-40058994)
chr1 (203-278)||(52688572-52688649)
chr1 (206-270)||(23337853-23337917)
chr1 (211-278)||(2138979-2139046)
chr1 (203-270)||(38786904-38786971)
chr1 (203-270)||(40883454-40883521)
chr1 (203-270)||(41855679-41855746)
chr1 (203-270)||(44240562-44240629)
chr1 (203-270)||(48389109-48389176)
chr1 (203-278)||(50014511-50014586)
chr1 (229-278)||(31651851-31651900)
chr1 (203-268)||(41414246-41414311)
chr1 (203-270)||(8048706-8048773)
chr1 (207-270)||(27990762-27990825)
chr1 (203-270)||(31932136-31932203)
chr1 (203-278)||(36035729-36035804)
chr1 (203-270)||(47912324-47912391)
chr1 (227-278)||(48312095-48312146)
chr1 (229-278)||(4489130-4489179)
chr1 (219-278)||(23393291-23393350)
chr1 (219-269)||(30005766-30005816)
chr1 (228-270)||(32968181-32968223)
chr1 (240-274)||(43590912-43590946)
chr1 (229-270)||(3555273-3555314)
chr1 (229-266)||(32495199-32495236)
chr1 (229-270)||(50295894-50295935)
chr1 (203-275)||(33526115-33526187)
chr1 (203-259)||(33730163-33730219)
[»] chr3 (63 HSPs)
chr3 (164-278)||(9997821-9997934)
chr3 (203-278)||(10232426-10232501)
chr3 (203-278)||(44821470-44821545)
chr3 (158-278)||(10228670-10228789)
chr3 (203-278)||(12250348-12250421)
chr3 (203-278)||(9484639-9484714)
chr3 (203-278)||(12948083-12948158)
chr3 (203-278)||(20144863-20144938)
chr3 (203-278)||(29455649-29455724)
chr3 (203-278)||(29793319-29793394)
chr3 (203-278)||(32961289-32961364)
chr3 (203-278)||(34263645-34263720)
chr3 (203-278)||(42098568-42098643)
chr3 (203-278)||(49076367-49076442)
chr3 (155-270)||(53019824-53019938)
chr3 (205-278)||(34555196-34555269)
chr3 (203-278)||(901029-901104)
chr3 (203-278)||(34669651-34669726)
chr3 (203-278)||(48927743-48927818)
chr3 (203-278)||(50673720-50673795)
chr3 (203-270)||(4945800-4945867)
chr3 (203-278)||(16434798-16434873)
chr3 (203-270)||(26759522-26759589)
chr3 (203-278)||(28958940-28959015)
chr3 (203-278)||(29720438-29720513)
chr3 (203-278)||(52094035-52094110)
chr3 (203-278)||(53055566-53055641)
chr3 (210-270)||(23631541-23631601)
chr3 (203-259)||(38833925-38833981)
chr3 (203-278)||(18013411-18013486)
chr3 (203-278)||(36179077-36179152)
chr3 (203-270)||(36364712-36364779)
chr3 (203-270)||(53274944-53275011)
chr3 (203-257)||(10107614-10107668)
chr3 (203-269)||(33462748-33462814)
chr3 (203-267)||(49818800-49818864)
chr3 (225-281)||(54684606-54684662)
chr3 (203-278)||(1334236-1334311)
chr3 (203-270)||(1778404-1778471)
chr3 (203-270)||(2643218-2643285)
chr3 (203-278)||(4229129-4229204)
chr3 (203-278)||(43370334-43370409)
chr3 (203-270)||(46866386-46866453)
chr3 (203-278)||(47340025-47340100)
chr3 (228-277)||(10819385-10819434)
chr3 (229-270)||(48690204-48690245)
chr3 (238-278)||(14751002-14751042)
chr3 (203-275)||(43394502-43394574)
chr3 (203-259)||(47069449-47069505)
chr3 (203-259)||(50035113-50035169)
chr3 (219-270)||(3086292-3086343)
chr3 (219-270)||(34680240-34680291)
chr3 (231-270)||(35322350-35322389)
chr3 (203-270)||(38878427-38878494)
chr3 (240-274)||(46763955-46763989)
chr3 (203-268)||(1325498-1325563)
chr3 (207-268)||(21489965-21490026)
chr3 (225-270)||(37166547-37166592)
chr3 (219-259)||(5030048-5030088)
chr3 (238-270)||(8437191-8437223)
chr3 (238-270)||(8440545-8440577)
chr3 (203-278)||(36594359-36594435)
chr3 (229-269)||(50888414-50888454)
[»] scaffold0221 (1 HSPs)
scaffold0221 (203-278)||(5419-5494)
[»] scaffold0001 (1 HSPs)
scaffold0001 (203-278)||(184009-184084)
[»] scaffold0500 (1 HSPs)
scaffold0500 (203-278)||(621-696)
[»] scaffold0069 (1 HSPs)
scaffold0069 (203-273)||(4484-4554)
[»] scaffold1248 (1 HSPs)
scaffold1248 (203-278)||(1402-1477)
[»] scaffold0952 (1 HSPs)
scaffold0952 (203-278)||(836-911)
[»] scaffold0281 (1 HSPs)
scaffold0281 (203-270)||(13147-13214)
[»] scaffold0687 (1 HSPs)
scaffold0687 (225-270)||(1054-1099)
[»] scaffold0289 (1 HSPs)
scaffold0289 (232-278)||(9196-9242)
[»] scaffold0283 (1 HSPs)
scaffold0283 (229-278)||(3064-3113)
[»] scaffold0204 (2 HSPs)
scaffold0204 (203-259)||(23916-23970)
scaffold0204 (225-281)||(24143-24199)
[»] scaffold0018 (1 HSPs)
scaffold0018 (229-266)||(145638-145675)
[»] scaffold0074 (1 HSPs)
scaffold0074 (229-269)||(45196-45236)


Alignment Details
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 41411010 - 41410892
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41411010 tactccctccgtcccttaatacttgatccatttggaatttttt-aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaata 41410912  T
Q  259 acatcatataagttgtcgtt 278  Q
     ||||||||||| |||||||    
T  41410911 gcatcatataagatgtcgtt 41410892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 1831064 - 1831182
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||||||||||||||||||||||||||       ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  1831064 tactccctccgtcccttaatacttgatccatttggaatttttt-aattttgacctaactgattttgaccgtatttttcaactaatatacaaagataaata 1831162  T
Q  259 acatcatataagttgtcgtt 278  Q
     ||||||||||| |||||||    
T  1831163 gcatcatataagatgtcgtt 1831182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 30352139 - 30352025
Alignment:
Q  156 taatacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataa 255  Q
    ||||||| ||||||||||||||||  ||| ||||||||||       ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30352139 taatactccctccgtcccttaataagtgacccatttggaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 30352040  T
Q  256 ataacatcatataag 270  Q
    |||||||||||||||    
T  30352039 ataacatcatataag 30352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 40316531 - 40316649
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||||||||||||||||||||||||||       ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  40316531 tactccctccgtcccttaatacttgatccatttggaatttttt-aattttgacctaactgattttgaccgtatttttcaactaatatacaaagataaata 40316629  T
Q  259 acatcatataagttgtcgtt 278  Q
     ||||||||||| |||||||    
T  40316630 gcatcatataagatgtcgtt 40316649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 14639780 - 14639661
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||| | ||||||||||||| ||||||||||       ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  14639780 tactccctccatgccttaatacttgacccatttggaatttttttaattttgacctaactaactttgaccgtatttttcaactaatatacaaagataaata 14639681  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  14639680 acatcatataagatgtcgtt 14639661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 20517366 - 20517240
Alignment:
Q  8 agaagtatagttcttcacytgtctaccagtaccactcccttctcccatactaattttacgtataannnnnnnnnngaataataattttacgtatacatga 107  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||    
T  20517366 agaagtatagttctttacctgtctaccagtaccactcccttctcccatactaattttacgtataa-attttttttgaataataattttacgtataaatga 20517268  T
Q  108 gtaatgtgggtaataaataagtaataatta 137  Q
    ||||  |||||||| |||||||||||||||    
T  20517267 gtaa--tgggtaatgaataagtaataatta 20517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 40365958 - 40365834
Alignment:
Q  157 aatacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaata---tacaaagat 253  Q
    |||||| |||||||||||||||| |||| ||||||||||       ||||||||||||||| ||||| ||||||||||||||||||||   |||||||||    
T  40365958 aatactccctccgtcccttaatatttgacccatttggaatttttttaattttgacctaactaactttgaccgtatttttcaactaatatagtacaaagat 40365859  T
Q  254 aaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||| |||||||    
T  40365858 aaataacatcatataagatgtcgtt 40365834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 26802166 - 26802047
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||||||||||||||||||||||||| | ||||  ||       |||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  26802166 atacttcctccgtcccttaatacttgacctattta-aatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 26802068  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||||||||||||| |||||    
T  26802067 aacatcatataagttttcgtt 26802047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 26809716 - 26809597
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||||||||||||||||||||||||| | ||||  ||       |||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  26809716 atacttcctccgtcccttaatacttgacctattta-aatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 26809618  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||||||||||||| |||||    
T  26809617 aacatcatataagttttcgtt 26809597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 26824743 - 26824624
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||||||||||||||||||||||||| | ||||  ||       |||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  26824743 atacttcctccgtcccttaatacttgacctattta-aatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 26824645  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||||||||||||| |||||    
T  26824644 aacatcatataagttttcgtt 26824624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 40797093 - 40797026
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  40797093 aattttgacctaactaactttgatcgtatttttcaactaatatacaaagataaataacatcatataag 40797026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 1098218 - 1098293
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  1098218 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 1098293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 13548256 - 13548331
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  13548256 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 13548331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 20022903 - 20022978
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  20022903 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 20022978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 20040436 - 20040361
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  20040436 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 20040361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 41263150 - 41263075
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  41263150 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 41263075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1781166 - 1781091
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  1781166 aattttgacctaagttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 1781091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 19344720 - 19344645
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  19344720 aattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 19344645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 30211762 - 30211687
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  30211762 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 30211687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 14057751 - 14057826
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  14057751 aattttgacctaacttactttgatcatatttttctattaatatacaaagataaataatatcatataagatgtcgtt 14057826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 14633050 - 14633117
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||| |||||||| || ||||||||||||||||||| ||||||||||    
T  14633050 aattttgacctaacttactttgaccatatttttctacaaatatacaaagataaataatatcatataag 14633117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 20503069 - 20502994
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||  ||| |||||||| || ||||||||||||||||||| |||||||||| |||||||    
T  20503069 aattttgacctaacttacttagaccatatttttctaccaatatacaaagataaataatatcatataagatgtcgtt 20502994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 30721706 - 30721631
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  30721706 aattttgacctaacttattttgaccatatttttctattaatatacaaagataaataatatcatataagatgtcgtt 30721631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 30788248 - 30788323
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| ||| |||||||| |||||||||||||||||||||| ||| |||||| |||||||    
T  30788248 aattttgacataacttactttgaccatatttttctactaatatacaaagataaataatatcgtataagatgtcgtt 30788323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 31191198 - 31191123
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  31191198 aattttgacctaatttactttgaccatatttttctattaatatacaaagataaataatatcatataagatgtcgtt 31191123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 33402612 - 33402545
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| ||||||||||    
T  33402612 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 33402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 40316861 - 40316936
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||  ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  40316861 aattttgacctaatttacttcgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 40316936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 41410680 - 41410605
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||  ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  41410680 aattttgacctaatttacttcgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 41410605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 40080024 - 40080098
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgt 277  Q
    |||||| |||||||| ||||| ||| |||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  40080024 aattttaacctaacttactttgaccatatttttctactaatatacatagataaataatatcatataagatgtcgt 40080098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 2551648 - 2551581
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||| |||||||||||| || |||||||    
T  2551648 aattttgacctaacttattttaaccatatttttctactaatatataaagataaataatattatataag 2551581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 9936909 - 9936834
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||| | | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  9936909 aattttgatctaatttattttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 9936834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 14607578 - 14607503
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | | ||| ||| |||||||| |||||||||||||||||| ||| |||||||||| |||||||    
T  14607578 aattttgacctaatttaatttgaccatatttttctactaatatacaaagataagtaatatcatataagatgtcgtt 14607503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 27674260 - 27674335
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||  ||| ||||||| | ||||||||| || |||||||||||||||||||| |||||||||| |||||||    
T  27674260 aattttgaattaattgactttgatcgtattttttaattaatatacaaagataaataatatcatataagatgtcgtt 27674335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 5985004 - 5985049
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||    
T  5985004 accgtatttttctactaatatacaaagataaataatatcatataag 5985049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 2799674 - 2799750
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttca-actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| || ||||||||   |||||||||||||||||||||| |||||||| | |||||||    
T  2799674 aattttgacctaacttactttgactgtattttttttactaatatacaaagataaataatatcatatatgatgtcgtt 2799750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 1831394 - 1831469
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||| | ||||  ||| |||||||| ||||||||||||||||| |||| |||||||||| |||||||    
T  1831394 aattttgacataatttacttcgaccatatttttctactaatatacaaagatatataatatcatataagatgtcgtt 1831469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 27477743 - 27477684
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| |||||||||||  |||||||||||||||||||||| |||||||||  |||||||    
T  27477743 actttgaccgtatttttttactaatatacaaagataaataatatcatataatatgtcgtt 27477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 27675583 - 27675650
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| | | |||||||| ||||||||||| |||||||||| ||||||||||    
T  27675583 aattttgacctagcttactttgatcatatttttctactaatatacatagataaataatatcatataag 27675650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 28142987 - 28143038
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  28142987 actttgaccatatttttctactaatatacaaagataaataatatcatataag 28143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 32474043 - 32473976
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||| || ||||| | ||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  32474043 aattttaacataacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 32473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 34169888 - 34169947
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| ||| |||||||| ||||||||||| |||||||||| |||||||||| |||||||    
T  34169888 actttgaccatatttttctactaatatacatagataaataatatcatataagatgtcgtt 34169947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 41042858 - 41042783
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||| || ||||| ||| |||||||| |||||||||||  ||||||||| |||||||||| |||||||    
T  41042858 aattttgatctagcttactttgaccatatttttctactaatatacattgataaataatatcatataagatgtcgtt 41042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 967235 - 967312
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata--acatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||||||  |||||||| | ||||||||||| |||||||  | |||||||||| |||||||    
T  967235 aattttgacctaacttactttaactatatttttctattaatatacaaatataaataatatatcatataagatgtcgtt 967312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 25946190 - 25946240
Alignment:
Q  220 ctttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||| ||| |||||||||||||||||| ||||||||||    
T  25946190 ctttaaccatatttttctactgatatacaaagataaataatatcatataag 25946240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 39104274 - 39104233
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  39104274 tatttttctactaatatacaaagataaataatatcatataag 39104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 2805840 - 2805916
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttca-actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| || ||||||||   |||||||||||||||||||||| |||||||| | |||||||    
T  2805840 aattttgacctaatttactttgactgtattttttttactaatatacaaagataaataatatcatatatgatgtcgtt 2805916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 8627178 - 8627234
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    |||||||| |||||| ||||| ||| |||||||  ||||||||||||||||||||||    
T  8627178 aattttgatctaacttactttgaccatatttttttactaatatacaaagataaataa 8627234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 39925246 - 39925322
Alignment:
Q  203 aattttgacctaactgactttaaccgtatt-tttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||| || | ||||| ||| |||| ||| | ||||||||||||||||||||| |||||||||| |||||||    
T  39925246 aattttgaccaaatttactttgaccatattattttacctaatatacaaagataaataatatcatataagatgtcgtt 39925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 6734824 - 6734899
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||| ||| |||| | ||| ||| || ||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  6734824 aattttaacccaacttaatttgaccataattttctactaatatataaagataaataatatcatataagatgtcgtt 6734899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 10465316 - 10465249
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| ||||||||  |||||||||| | |||||||| ||||||||||    
T  10465316 aattttgacctatcttactttgaccatatttttctgctaatatacatatataaataatatcatataag 10465249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 32110693 - 32110643
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagat 253  Q
    |||||||| |||| | ||||| |||||||||||| ||||||||||||||||    
T  32110693 aattttgatctaatttactttgaccgtatttttctactaatatacaaagat 32110643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 35641828 - 35641878
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||| ||| |||||||| ||||||||| |||||||||||| |||||||||    
T  35641828 actttgaccatatttttctactaatatataaagataaataatatcatataa 35641878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 4152305 - 4152256
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||||||||||||| |||||||| || ||||||| |||||||    
T  4152305 tatttttctactaatatacaaatataaataatattatataagatgtcgtt 4152256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 1918835 - 1918779
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    ||||||| | |||||||  |||| ||||||||||||||||| |||||||||| ||||    
T  1918835 actttaatcatatttttttactagtatacaaagataaataatatcatataagatgtc 1918779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 39035603 - 39035675
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| |||| | | ||||| | |||| ||| |||||||||||||||||||||| || ||||||| ||||    
T  39035603 aattttgatctaatttattttaatcatattattctactaatatacaaagataaataatataatataagatgtc 39035675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 29708559 - 29708679
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||| ||||||||||||||||  ||| ||||||||||       ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29708559 atactccctccgtcccttaataagtgacccatttggaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 29708658  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||||||||||| |||||||    
T  29708659 aacatcatataagatgtcgtt 29708679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 32909060 - 32909173
Alignment:
Q  165 ctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatca 264  Q
    |||||||||||||||||||| |||||| |||       ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  32909060 ctccgtcccttaatacttgacccatttagaatatttttaattttgacctaattaactttgaccgtatttttcaactaatatacaaagataaataacatca 32909159  T
Q  265 tataagttgtcgtt 278  Q
    |||||| |||||||    
T  32909160 tataagatgtcgtt 32909173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 14511844 - 14511958
Alignment:
Q  164 cctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatc 263  Q
    ||||||||||||| || ||||| |||||| ||       ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||    
T  14511844 cctccgtcccttactatttgattcatttgaaatttttttaattttgacctaactaattttgaccgtatttttcaactaatatacaaagataaataacatc 14511943  T
Q  264 atataagttgtcgtt 278  Q
    ||||||| |||||||    
T  14511944 atataagatgtcgtt 14511958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 42150212 - 42150093
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||||||||||  ||||| |||| |||       |||||| || ||||||||||| |||||||||||||||||||||| |||||||||||    
T  42150212 tactccctccgtcccttaataagtgatcaatttagaatttttttaattttaacttaactgactttgaccgtatttttcaactaatataaaaagataaata 42150113  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  42150112 acatcatataagatgtcgtt 42150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 25691615 - 25691540
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  25691615 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 25691540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 30464475 - 30464550
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  30464475 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 30464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 20671299 - 20671366
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  20671299 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 20671366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 38842206 - 38842281
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  38842206 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 38842281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 43184796 - 43184722
Alignment:
Q  204 attttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||| |||||||||| |||||||    
T  43184796 attttgacctaacttactttgaccatatttttctactaatatacaaaaataaataatatcatataagatgtcgtt 43184722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 38036854 - 38036809
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38036854 accgtatttttcaactaatatacaaagataaataacatcatataag 38036809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 25009187 - 25009259
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  25009187 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtc 25009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 4960194 - 4960269
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| |||||||||| |||||||    
T  4960194 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataagatgtcgtt 4960269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 5777572 - 5777497
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||| || | ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  5777572 aattttgatctatcttattttaaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 5777497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 8496904 - 8496837
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||| |||||||| || ||||||||||||||||||| ||||||||||    
T  8496904 aattttgacctaacttactttgaccatatttttctacgaatatacaaagataaataatatcatataag 8496837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 13888632 - 13888573
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  13888632 actttgaccgtatttttctactaatatacaaagataaataatatcatataagatgtcgtt 13888573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 14378704 - 14378629
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||  |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  14378704 aattttgacctaacttactttgactatatttttctactaatatataaagataaataatatcatataagatgtcgtt 14378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 21132946 - 21132871
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| ||| |||||||| ||||||||||||||| |||||| |||||||||| |||||||    
T  21132946 aattttgacttaacttactttgaccatatttttctactaatatacaaagaaaaataatatcatataagatgtcgtt 21132871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 23437831 - 23437756
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| |  |||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  23437831 aattttgacctaatttgctttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 23437756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 29917946 - 29917879
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  29917946 aattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataag 29917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 30653403 - 30653478
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||| | |||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  30653403 aattttaatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 30653478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 36632211 - 36632136
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| | ||| ||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  36632211 aattttgatctaacttattttgaccatatttttctactaatataaaaagataaataatatcatataagttgtcgtt 36632136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 44887733 - 44887658
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||| ||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  44887733 aattttgacctgacttagtttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 44887658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 1645419 - 1645357
Alignment:
Q  208 tgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||| ||||| |||||||||||| ||||||||||||| |||||||| ||||||||||    
T  1645419 tgacctaacttactttgaccgtatttttctactaatatacaaaaataaataatatcatataag 1645357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 11756819 - 11756896
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaacta--atatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||||||||  ||||||| |||||||||| |||||||||| |||||||    
T  11756819 aattttgacctaacttactttgaccatatttttcaactaatatatacatagataaataatatcatataagatgtcgtt 11756896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 3466326 - 3466398
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    ||||||||||||||| ||||| |   |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  3466326 aattttgacctaacttactttgattttatttttctactaatatacaaagataaataatatcatataagatgtc 3466398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 4327137 - 4327065
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| |||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  4327137 aattttgatctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtc 4327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 37094175 - 37094242
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  37094175 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 37094242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 281
Target Start/End: Original strand, 9615582 - 9615644
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgttcga 281  Q
    ||||| |||||||||||  |||||||||||||||||||||| || ||||||| ||||||||||    
T  9615582 actttgaccgtatttttttactaatatacaaagataaataatattatataagatgtcgttcga 9615644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 25118831 - 25118904
Alignment:
Q  205 ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||  | ||| ||| | |||||| |||||||||||||||||||||| |||||||||| |||||||    
T  25118831 ttttgacctaacatattttgaccttctttttctactaatatacaaagataaataatatcatataagatgtcgtt 25118904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 27301931 - 27301980
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  27301931 tatttttctactaatatacaaagataaataatatcatataagatgtcgtt 27301980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 44039894 - 44039943
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  44039894 tatttttctactaatatacaaagataaataatatcatataagatgtcgtt 44039943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 29616344 - 29616272
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| |||||| ||||| | | ||||| || |||||||||||||||||||||| |||||||||| ||||    
T  29616344 aattttgatctaacttactttgatcatatttgtctactaatatacaaagataaataatatcatataagatgtc 29616272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 40645652 - 40645708
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||||| ||||| | | |||||||| ||||||||||||||||||||||    
T  40645652 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 40645708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 761593 - 761660
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||  ||||||| ||||||||||    
T  761593 aattttgacctaatttactttgaccatatttttctactaatatacaaatttaaataatatcatataag 761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 15870218 - 15870293
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||| | ||||| | | |||||||| ||||||||||||| |||||||| |||||||||| |||||||    
T  15870218 aattttgatctaatttactttgatcatatttttctactaatatacaaaaataaataatatcatataagatgtcgtt 15870293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 18419041 - 18419108
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| ||||| |||| ||||||||||    
T  18419041 aattttgacctagcttactttgaccatatttttctactaatatacatagatagataatatcatataag 18419108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 23547111 - 23547186
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| |   |||||||| |||||||||||||||||||||| || ||||||| |||||||    
T  23547111 aattttgatctaacttactttgataatatttttctactaatatacaaagataaataatattatataagatgtcgtt 23547186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 43049287 - 43049220
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| ||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  43049287 aattttgatctagctaactttgaccatatttttctactaatatacatagataaataatatcatataag 43049220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 7603372 - 7603417
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||  |||||||||||||||||||||| ||||||||||    
T  7603372 accgtatttttatactaatatacaaagataaataatatcatataag 7603417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 17523850 - 17523915
Alignment:
Q  205 ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||| |||||||| ||||| | | ||||||||  ||||||||||||||||||||| ||||||||||    
T  17523850 ttttaacctaacttactttgatcatatttttctgctaatatacaaagataaataatatcatataag 17523915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 7431310 - 7431270
Alignment:
Q  230 atttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  7431310 atttttctactaatatacaaagataaataatatcatataag 7431270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 44871409 - 44871449
Alignment:
Q  238 actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  44871409 actaatatacaaagataaataatatcatataagatgtcgtt 44871449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 2026615 - 2026690
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||  | || ||  |||||||||||||||||||||| || ||||||| |||||||    
T  2026615 aattttgacctaacttactttgactatgttgttttactaatatacaaagataaataatattatataagatgtcgtt 2026690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 40035330 - 40035397
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||| | | ||||| | |||||||| ||||||||||||| |||||||| ||||||||||    
T  40035330 aattttgatctaatttagtttaatcatatttttctactaatatacaaaaataaataatatcatataag 40035397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 8059016 - 8058970
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||  |||||||||||||||||||||| |||||||||| ||||    
T  8059016 tatttttttactaatatacaaagataaataatatcatataagatgtc 8058970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 38036907 - 38036869
Alignment:
Q  157 aatacttcctccgtcccttaatacttgatccatttggaa 195  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  38036907 aatactccctccgtcccttaatacttgacccatttggaa 38036869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 8123719 - 8123756
Alignment:
Q  241 aatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  8123719 aatatacaaagataaataatatcatataagatgtcgtt 8123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 26627971 - 26628012
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  26627971 tatttttctattaatatacaaagataaataatatcatataag 26628012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 35584166 - 35584125
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  35584166 tatttttctattaatatacaaagataaataatatcatataag 35584125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 42786090 - 42786049
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  42786090 tatttttctattaatatacaaagataaataatatcatataag 42786049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 44947086 - 44947135
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| | |||||||| ||||||||||| |||||||||| |||||||    
T  44947086 tatttttctattaatatactaagataaataatatcatataagatgtcgtt 44947135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 9459284 - 9459244
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataa 269  Q
    |||||||| ||||||||| |||||||||||| |||||||||    
T  9459284 tatttttctactaatatataaagataaataatatcatataa 9459244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 10535957 - 10535997
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  10535957 actttaactgtatttttatactaatatacaaagataaataa 10535997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 16345255 - 16345295
Alignment:
Q  238 actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| |||||||||||| |||||||||| |||||||    
T  16345255 actaatatataaagataaataatatcatataagatgtcgtt 16345295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 21133050 - 21133014
Alignment:
Q  242 atatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21133050 atatacaaagataaataatatcatataagatgtcgtt 21133014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 158 - 266
Target Start/End: Original strand, 17492667 - 17492775
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||| ||||||||||||||||||||| ||||||||||       ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17492667 atactccctccgtcccttaatacttgacccatttggaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 17492766  T
Q  258 aacatcata 266  Q
    |||||||||    
T  17492767 aacatcata 17492775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 13848917 - 13848992
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13848917 aattttgacctaactgattttaaccgtatttttcaactaatatacaaagataaataacatcatataagatgtcgtt 13848992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 2806234 - 2806116
Alignment:
Q  160 acttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||| |||||||||||||||||| |||       |||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||    
T  2806234 acttcctccgtcctttaatacttgatccatttagaatttttttaattttgaactaattaactttgaccgtatttttcaactaatatacaaagataaataa 2806135  T
Q  260 catcatataagttgtcgtt 278  Q
    |||| |||||| |||||||    
T  2806134 catcctataagatgtcgtt 2806116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 1615537 - 1615657
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||| ||||| ||||||||||| |||| |||||||||       |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||    
T  1615537 atactccctccatcccttaatacgtgattcatttggaatttttttaattttgatctaattgactttgaccgtatttttcaactaatatacaaagataaat 1615636  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||| ||||||| |||||||    
T  1615637 aacattatataagatgtcgtt 1615657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 11260710 - 11260820
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||||||||||||||||||||||||||         |||||| |||||| ||||| |||||||||||||||||||||| |||||||||||    
T  11260710 tactccctccgtcccttaatacttgatccatttggaa---------ttttgatctaactaactttgaccgtatttttcaactaatatataaagataaata 11260800  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  11260801 acatcatataagatgtcgtt 11260820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 24505554 - 24505629
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24505554 aattttgacctaactgactttgactgtatttttcaactaatatacaaagataaataacatcatataagatgtcgtt 24505629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 48080115 - 48079993
Alignment:
Q  156 taatacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataa 255  Q
    ||||||| ||| ||||||||||||||||| |||||| |||       |||||||| |||||||||||| |||||||||||||||| |||||||||| |||    
T  48080115 taatactcccttcgtcccttaatacttgacccatttagaatttttttaattttgatctaactgactttgaccgtatttttcaactgatatacaaaggtaa 48080016  T
Q  256 ataacatcatataagttgtcgtt 278  Q
    |||| || ||||||| |||||||    
T  48080015 ataatattatataagatgtcgtt 48079993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 10384891 - 10384966
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| | |||||||| |||||||    
T  10384891 aattttgacctaacttactttaaccatatttttctactaatatacaaagataaataataacatataagatgtcgtt 10384966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 31152704 - 31152779
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  31152704 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 31152779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 43447208 - 43447283
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  43447208 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 43447283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1613238 - 1613163
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  1613238 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 1613163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 28914411 - 28914486
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  28914411 aattttgacctaacttactttgaccatatttttctactaatatataaagataaataatatcatataagatgtcgtt 28914486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 37164059 - 37164134
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||  |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  37164059 aattttgacctaacttactttgactatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 37164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 43047430 - 43047505
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||| |||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  43047430 aattttaacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 43047505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 46608256 - 46608331
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  46608256 aattttgacctaacttactttgaccatatttttatactaatatacaaagataaataatatcatataagatgtcgtt 46608331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 47834164 - 47834092
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    ||||||||| ||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  47834164 aattttgacataacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtc 47834092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 53987793 - 53987725
Alignment:
Q  210 acctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  53987793 acctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 53987725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 3708296 - 3708363
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| ||||||||||    
T  3708296 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataag 3708363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 4272034 - 4271959
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| || ||||||||| | ||||||| |||||||||||| |||||||||| |||||||    
T  4272034 aattttgacctaacttactttgactgtatttttctattaatatataaagataaataatatcatataagatgtcgtt 4271959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 8525436 - 8525361
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  8525436 aattttgacctaacttactttgatcatatttttctactaatatacaaggataaataatatcatataagatgtcgtt 8525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 33394120 - 33394195
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||| |||||||||||  ||||||||| |||||||    
T  33394120 aattttgacctaacttactttgaccatatttttctactaatatacgaagataaataatctcatataagatgtcgtt 33394195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 39171001 - 39171076
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| || ||||||| |||||||    
T  39171001 aattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatataatataagatgtcgtt 39171076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 55631895 - 55631820
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  55631895 aattttgacctaacttattttgaccatatttttttactaatatacaaagataaataatatcatataagatgtcgtt 55631820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 40411629 - 40411553
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttca-actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||   |||||||||||||||||||||| |||||||||| |||||||    
T  40411629 aattttgacctaacttactttgaccatattttttttactaatatacaaagataaataatatcatataagatgtcgtt 40411553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 31657376 - 31657309
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  31657376 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 31657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 37667794 - 37667719
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| | |||||||||||||||||||| |||| ||||| |||||||    
T  37667794 aattttgacctaatttactttgaccatatttttctattaatatacaaagataaataatatcaaataagatgtcgtt 37667719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 39260395 - 39260470
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | | ||| ||  |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  39260395 aattttgacctaatttattttgacaatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 39260470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 50684963 - 50685038
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| | | |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  50684963 aattttgatctaacttactttgatcatatttttctactaatatataaagataaataatatcatataagatgtcgtt 50685038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 42185317 - 42185383
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||||||||||| | | ||| ||| |||||||| |||||||||||||||||||||| |||||||||    
T  42185317 aattttgacctaatttagtttgaccatatttttctactaatatacaaagataaataatatcatataa 42185383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 48380518 - 48380572
Alignment:
Q  205 ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||    
T  48380518 ttttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 48380572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1981402 - 1981326
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttca-actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| ||| |||||||   |||||||||||||||||||||| |||||||||| |||||||    
T  1981402 aattttgatctaacttactttgaccatattttttttactaatatacaaagataaataatatcatataagatgtcgtt 1981326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 6520478 - 6520545
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||  |||||||| ||||||||||| |||||||||| ||||||||||    
T  6520478 aattttgacctagcttactttgactatatttttctactaatatacatagataaataatatcatataag 6520545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 28909860 - 28909793
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| ||| | ||||| ||| |||||||| ||||| |||||||||||||||| ||||||||||    
T  28909860 aattttgacttaaattactttgaccatatttttctactaaaatacaaagataaataatatcatataag 28909793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 39332850 - 39332783
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||| ||||| ||| |||||||| |||||||||||||  ||||||| ||||||||||    
T  39332850 aattttgaactaacttactttgaccatatttttctactaatatacaaaagtaaataatatcatataag 39332783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 18881351 - 18881305
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  18881351 tatttttctactaatatacaaagataaataatatcatataagatgtc 18881305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 38715626 - 38715678
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  38715626 accgtatttttctactaatatacaa-gataaataatatcatataagatgtcgtt 38715678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 39195535 - 39195600
Alignment:
Q  205 ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| ||  ||||| ||| |||||||  |||||||||||||||||||||| ||||||||||    
T  39195535 ttttgacctgacatactttgaccatatttttatactaatatacaaagataaataatatcatataag 39195600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 1377546 - 1377602
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| ||||||||||    
T  1377546 aattttgacctatcttactttgaccatatttttctactaatatacatagataaataa 1377602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 29821093 - 29821145
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataa 255  Q
    |||||||| |||||| ||||| ||| |||||||| ||||||||||||||||||    
T  29821093 aattttgatctaacttactttgaccatatttttctactaatatacaaagataa 29821145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 14958201 - 14958150
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||| ||| |||||||| ||||||||||||| |||||||| ||||||||||    
T  14958201 actttgaccatatttttctactaatatacaaaaataaataatatcatataag 14958150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 23605922 - 23605855
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| | | |||||||| ||||| ||||| |||||||||| ||||||||||    
T  23605922 aattttgacctagcttactttgatcatatttttctactaacatacatagataaataatatcatataag 23605855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 29844328 - 29844277
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||||||||| | ||||||| |||||||||||| || |||||||    
T  29844328 actttaaccgtatttttctattaatatataaagataaataatattatataag 29844277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 6234858 - 6234892
Alignment:
Q  240 taatatacaaagataaataacatcatataagttgt 274  Q
    |||||||||||||||||||| ||||||||||||||    
T  6234858 taatatacaaagataaataatatcatataagttgt 6234892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 44210208 - 44210258
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||| ||| |||||||| ||||||||||| |||||||||| |||||||||    
T  44210208 actttgaccatatttttctactaatatacatagataaataatatcatataa 44210258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 1348776 - 1348727
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||||||||||||| |||||||| || ||||||| |||||||    
T  1348776 tatttttctactaatatacaaatataaataatattatataagatgtcgtt 1348727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 36662693 - 36662652
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| ||||||||| |||||||||||| ||||||||||    
T  36662693 tatttttctactaatatataaagataaataatatcatataag 36662652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 48336448 - 48336394
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||||| ||||| | |||||||||| ||||||||  ||||||||||||    
T  48336448 aattttgacctaacttactttgatcgtatttttctactaatat--aaagataaataa 48336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 48336677 - 48336621
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataagttgtcgttcga 281  Q
    |||||||||||| ||||||||||||||||| |||| || ||| ||| | ||||||||    
T  48336677 accgtatttttctactaatatacaaagatagataatattatacaagatatcgttcga 48336621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 19800 - 19681
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||||||||||| ||||||||||||||       ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||    
T  19800 tactccctccgtcccttaatacctgatccatttggaatatttttaattttgacctaattgactttgacagtatttttcaactaatatacaaagataaata 19701  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  19700 acatcatataagatgtcgtt 19681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 4e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 2912893 - 2913015
Alignment:
Q  156 taatacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataa 255  Q
    ||||||| ||||||||||||||||  ||| |||||| |||       ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2912893 taatactccctccgtcccttaataagtgacccatttagaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 2912992  T
Q  256 ataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| |||||||    
T  2912993 ataacatcatataagatgtcgtt 2913015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 16661627 - 16661552
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  16661627 aattttgacctaacttactttgaccgtatttttctactaatatataaagataaataatatcatataagatgtcgtt 16661552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 24798571 - 24798496
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  24798571 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 24798496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 24825208 - 24825283
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  24825208 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 24825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 30699304 - 30699379
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  30699304 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 30699379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 2141611 - 2141686
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  2141611 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 2141686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 2397813 - 2397888
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  2397813 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 2397888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 2656695 - 2656620
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||  |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  2656695 aattttgacctaacttactttgactatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 2656620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 4890151 - 4890076
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  4890151 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 4890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 6142532 - 6142457
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  6142532 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 6142457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 29515051 - 29514976
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  29515051 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 29514976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 32541502 - 32541427
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  32541502 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 32541427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 2667350 - 2667275
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||  |||||||| ||||||| |||||||||||||| |||||||||| |||||||    
T  2667350 aattttgacctaacttactttgactatatttttctactaataaacaaagataaataatatcatataagatgtcgtt 2667275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 9022883 - 9022958
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||  ||||| ||| |||||||| ||||||||||||| |||||||| |||||||||| |||||||    
T  9022883 aattttgacctaacatactttgaccatatttttctactaatatacaaaaataaataatatcatataagatgtcgtt 9022958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 10105854 - 10105929
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| | ||||||| |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  10105854 aattttgacttaacttattttaaccatatttttctactaatatataaagataaataatatcatataagatgtcgtt 10105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 31708936 - 31709003
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| ||| | ||||| |||||||||||| |||||||||||||||||||||| ||||||||||    
T  31708936 aattttgacttaatttactttgaccgtatttttctactaatatacaaagataaataatatcatataag 31709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 17496343 - 17496281
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcat 265  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||    
T  17496343 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcat 17496281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 995606 - 995681
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||| || | ||||| ||  |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  995606 aattttgaccaaatttactttgactatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 995681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 6188681 - 6188606
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||  ||||||||| |||||||||||| |||||||||| |||||||    
T  6188681 aattttgacctaacttactttgagcatatttttttactaatatataaagataaataatatcatataagatgtcgtt 6188606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 10109436 - 10109361
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||  |||||||| ||||||||||||| |||||||| || ||||||| |||||||    
T  10109436 aattttgacctaacttactttgactttatttttctactaatatacaaaaataaataatattatataagatgtcgtt 10109361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 28483081 - 28483155
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||  |||||||||||| |||||||||| |||||||    
T  28483081 aattttgatctaacttactttaaccatatttttctactaatatt-aaagataaataatatcatataagatgtcgtt 28483155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 29795494 - 29795568
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||  |||||||||||| |||||||||| |||||||    
T  29795494 aattttgatctaacttactttaaccatatttttctactaatatt-aaagataaataatatcatataagatgtcgtt 29795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 16969421 - 16969496
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||| | ||||| ||| |||||||| ||||||||||||| |||||||| |||||||||  |||||||    
T  16969421 aattttgacttaatttactttgaccatatttttctactaatatacaaatataaataatatcatataaaatgtcgtt 16969496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 17417739 - 17417672
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||| |||  | ||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  17417739 aattttgaccaaacataatttaatcatatttttctactaatatacaaagataaataatatcatataag 17417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 32673791 - 32673866
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| | ||| ||| |||||||| ||||||||||| ||| |||||| |||||||||| |||||||    
T  32673791 aattttgatctaacttattttgaccatatttttctactaatatacatagagaaataatatcatataagatgtcgtt 32673866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 16434602 - 16434652
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||| ||| |||||||| |||||||||||||||||||||| |||||||||    
T  16434602 actttgaccatatttttccactaatatacaaagataaataatatcatataa 16434652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 16120877 - 16120824
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||  |||||||||||||||||||||| |||||||||  |||||||    
T  16120877 accgtatttttttactaatatacaaagataaataatatcatataaaatgtcgtt 16120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 19788623 - 19788688
Alignment:
Q  205 ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| ||  ||||||||| |||||||| ||||||||||||| |||||||| ||||| ||||    
T  19788623 ttttgacctgacatactttaaccatatttttctactaatatacaaatataaataatatcatgtaag 19788688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 24693207 - 24693248
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  24693207 tatttttctactaatatacaaagataaataatatcatataag 24693248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 35117323 - 35117384
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatca 264  Q
    |||||| || ||||| ||||| ||| |||||||| |||||||||||||||||||||| ||||    
T  35117323 aattttaacataacttactttgaccatatttttccactaatatacaaagataaataatatca 35117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 12869413 - 12869373
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataa 269  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  12869413 tatttttctactaatatacaaagataaataatatcatataa 12869373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 17179394 - 17179348
Alignment:
Q  232 ttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| |||||||||||||||||||||| || ||||||| |||||||    
T  17179394 ttttctactaatatacaaagataaataatattatataagatgtcgtt 17179348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 1870532 - 1870569
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaa 195  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  1870532 atacttcctccgtcccttaatacttgacctatttggaa 1870569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 6e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 41844767 - 41844887
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaa-ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||||||||||||||||||||||||| |||||||||       || ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  41844767 tacttcctccgtcccttaatacttgattcatttggaatttttttaaattttgacctaactaactttgaccgtattttttaactaatatacaaagataaat 41844866  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||||||||||| |||||||    
T  41844867 aacatcatataagatgtcgtt 41844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 29247626 - 29247745
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||| |||||||||| |||| ||||||||||       ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  29247626 tactccctccttcccttaatatttgacccatttggaatatttttaattttgacctaactgactttgaccgtattttttaactaatatacaaagataaata 29247725  T
Q  259 acatcatataagttgtcgtt 278  Q
    | |||||||||| |||||||    
T  29247726 atatcatataagatgtcgtt 29247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 48448561 - 48448636
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  48448561 aattttgacctaacttactttaaccatatttttccactaatatacaaagataaataatatcatataagatgtcgtt 48448636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 9173357 - 9173282
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  9173357 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 9173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 16807167 - 16807092
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  16807167 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 16807092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 31496666 - 31496591
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| |||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  31496666 aattttgacctaacttactttgaccgtatttttctattaatatacaaagataaataatatcatataagatgtcgtt 31496591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 38069094 - 38069169
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  38069094 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 38069169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 38850745 - 38850820
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  38850745 aattttgacctaacttactttgaccatatttttccactaatatacaaagataaataatatcatataagatgtcgtt 38850820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 33376818 - 33376893
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||||||| |||||| |||||||||| |||||||    
T  33376818 aattttgacctaacttactttgaccgtatttttctattaatatacaaagaaaaataatatcatataagatgtcgtt 33376893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 25274038 - 25273963
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| || ||||| |||||||||||||||||||||| || ||||||| |||||||    
T  25274038 aattttgacctaacttactttgaccataattttctactaatatacaaagataaataatattatataagatgtcgtt 25273963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 28016158 - 28016225
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||| ||||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  28016158 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataag 28016225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 30462242 - 30462167
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  30462242 aattttgacttaacttactttgaccatatttttttactaatatacaaagataaataatatcatataagatgtcgtt 30462167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 35693851 - 35693776
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||  ||| |||||||| ||||||||||||| |||||||| |||||||||| |||||||    
T  35693851 aattttgacctaacttacttcgaccatatttttctactaatatacaaaaataaataatatcatataagatgtcgtt 35693776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 37101047 - 37100972
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| | ||||||||||||| |||||| |||||||||| |||||||    
T  37101047 aattttgacctaacttactttgaccatatttttctattaatatacaaagaaaaataatatcatataagatgtcgtt 37100972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 47713453 - 47713386
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| |||||||||||   ||||||||||||||||||||| ||||||||||    
T  47713453 aattttgacctaacttactttgaccgtatttttttgctaatatacaaagataaataatatcatataag 47713386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 3124167 - 3124092
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||| ||||||| || ||||||||| ||||||||||||| |||||||| |||||||||  |||||||    
T  3124167 aattttgatctaattgactttgactgtatttttctactaatatacaaaaataaataatatcatataaaatgtcgtt 3124092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 26651214 - 26651155
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  26651214 actttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 26651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 32222593 - 32222660
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||| | ||||||| |||||||||| | |||||||||||||||||||| ||||||||||    
T  32222593 aattttgatctaatttactttaatcgtatttttctattaatatacaaagataaataatatcatataag 32222660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 40231971 - 40232046
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | | ||| ||| |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  40231971 aattttgacctaatttattttgaccatatttttctactaatatataaagataaataatatcatataagatgtcgtt 40232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 41007977 - 41007902
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||   |||||||| |||||||||| |||||||    
T  41007977 aattttgacctaacttactttgaccatatttttctactaatatacagcaataaataatatcatataagatgtcgtt 41007902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 35265816 - 35265767
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  35265816 tatttttctactaatatacaaagataaataatatcatataagatgtcgtt 35265767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 38353593 - 38353544
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  38353593 tatttttctactaatatacaaagataaataatatcatataagatgtcgtt 38353544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 38441856 - 38441920
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatat 267  Q
    |||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||    
T  38441856 aatttttacctaacttactttgaccatatttttctactaatatacaaagatgaataatatcatat 38441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 4088841 - 4088782
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| || ||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  4088841 actttgactgtatttttctattaatatacaaagataaataatatcatataagatgtcgtt 4088782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 26190362 - 26190311
Alignment:
Q  227 cgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||| ||||||||||||||||||||||  ||||||||| |||||||    
T  26190362 cgtatttttctactaatatacaaagataaataatttcatataagatgtcgtt 26190311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 23348415 - 23348465
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||| ||| |||||||  ||||||||||||||||||||||||||||||||    
T  23348415 actttgaccatatttttttactaatatacaaagataaataacatcatataa 23348465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 42493564 - 42493622
Alignment:
Q  207 ttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcat 265  Q
    ||||||||||  ||||| ||| |||||||| |||||||||||||||||||||| |||||    
T  42493564 ttgacctaacatactttgaccatatttttctactaatatacaaagataaataatatcat 42493622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 46242501 - 46242424
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttca--actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||    |||||||||||||||||||||| |||||||||  |||||||    
T  46242501 aattttgacctaacttactttgaccatatttttttttactaatatacaaagataaataatatcatataaaatgtcgtt 46242424  T

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Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 38198673 - 38198632
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  38198673 tatttttctactaatatacaaagataaataatatcatataag 38198632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 40348599 - 40348558
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  40348599 tatttttctactaatatacaaagataaataatatcatataag 40348558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 4033503 - 4033439
Alignment:
Q  206 tttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| ||  ||||| |||||||||||  |||||||||||||||||||||| || |||||||    
T  4033503 tttgacctgacgtactttgaccgtatttttatactaatatacaaagataaataatattatataag 4033439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 7314362 - 7314310
Alignment:
Q  207 ttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||  ||||| ||| |||||||| ||||||||||||||||||||||    
T  7314362 ttgacctaacatactttgaccatatttttctactaatatacaaagataaataa 7314310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 40818718 - 40818662
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    |||||||| |||||| ||| | ||| |||||||| ||||||||||||||||||||||    
T  40818718 aattttgatctaacttactctgaccatatttttctactaatatacaaagataaataa 40818662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 4620110 - 4620176
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||| ||||||| |  |||||||||||||||||||| || |||||||    
T  4620110 aattttgacctaacttactttgaccatattttttat-taatatacaaagataaataatattatataag 4620176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 7461052 - 7461002
Alignment:
Q  228 gtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||  ||||||||| |||||||||||| |||||||||| |||||||    
T  7461052 gtattttttcactaatataaaaagataaataatatcatataagatgtcgtt 7461002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 36404922 - 36404872
Alignment:
Q  228 gtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||||||| |||||||||||| || ||||||| |||||||    
T  36404922 gtatttttctactaatatagaaagataaataatattatataagatgtcgtt 36404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 47080685 - 47080735
Alignment:
Q  228 gtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| |||||||||||||||||||||| || ||||||  |||||||    
T  47080685 gtatttttctactaatatacaaagataaataatattatataatatgtcgtt 47080735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 5842186 - 5842235
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||  ||||||||| |||||||||||| |||||||||| |||||||    
T  5842186 tatttttatactaatatataaagataaataatatcatataagatgtcgtt 5842235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 23734239 - 23734280
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||| ||||||||||| ||||||||||    
T  23734239 tatttttctactaatatacgaagataaataatatcatataag 23734280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 14201571 - 14201528
Alignment:
Q  229 tatttttcaactaatatacaaagataaata--acatcatataag 270  Q
    |||||||| |||||||||||||||||||||  ||||||||||||    
T  14201571 tatttttctactaatatacaaagataaataatacatcatataag 14201528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 18756642 - 18756698
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    |||||||||||| || ||||| ||  |||||||| ||||||||| ||||||||||||    
T  18756642 aattttgacctatcttactttgactatatttttctactaatatataaagataaataa 18756698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 29255303 - 29255352
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||  |||||||||||||||||  |||||||||||| ||||||||||    
T  29255303 actttaactatatttttcaactaatat--aaagataaataatatcatataag 29255352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 310 - 191
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| |||||||||||||||||||||  |||||||||       |||||||||||||||| |||| || |||||||||||||||||||||||||||||||    
T  310 tactccctccgtcccttaatacttgacgcatttggaatatttttaattttgacctaactggctttgactgtatttttcaactaatatacaaagataaata 211  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  210 acatcatataagatgtcgtt 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 157 - 278
Target Start/End: Original strand, 9273351 - 9273471
Alignment:
Q  157 aatacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaa 256  Q
    |||||| |||||||||||||| ||||||  |||||||||       ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  9273351 aatactccctccgtcccttaa-acttgactcatttggaatttttttaattttgacttaactgactttgaccgtatttttcaactaatatacaaagataaa 9273449  T
Q  257 taacatcatataagttgtcgtt 278  Q
    |||||||||||||| |||||||    
T  9273450 taacatcatataagatgtcgtt 9273471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1749192 - 1749117
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1749192 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaataacatcatataagatgtcgtt 1749117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 7601457 - 7601342
Alignment:
Q  163 tcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacat 262  Q
    ||||||||||||||||||| ||| |||||||||       ||||||||  ||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  7601457 tcctccgtcccttaatactagattcatttggaatttttttaattttgatttaactgattttgatcgtatttttcaactaatatacaaagataaataacat 7601358  T
Q  263 catataagttgtcgtt 278  Q
    |||||||| |||||||    
T  7601357 catataagatgtcgtt 7601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 20917937 - 20917872
Alignment:
Q  213 taactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20917937 taactgactttgaccgtatttttcaactaatatacaaagataaataacatcatataagatgtcgtt 20917872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 7724631 - 7724556
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  7724631 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 7724556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 8373477 - 8373552
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  8373477 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 8373552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 12209032 - 12209107
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  12209032 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 12209107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 16126102 - 16126027
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  16126102 aattttgacctaacttactttgaccatatttttccactaatatacaaagataaataatatcatataagatgtcgtt 16126027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 38963838 - 38963913
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  38963838 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 38963913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 41436875 - 41436950
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  41436875 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 41436950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 8896314 - 8896389
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||| ||||| |||||||    
T  8896314 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcacataagatgtcgtt 8896389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 10333598 - 10333523
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  10333598 aattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 10333523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 16127800 - 16127725
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  16127800 aattttgacctaacttactttgatcatatttttccactaatatacaaagataaataatatcatataagatgtcgtt 16127725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 16333523 - 16333598
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| ||| |||||||||||||||||| |||||||||| |||||||    
T  16333523 aattttgacctaacttactttgaccatatttttccactgatatacaaagataaataatatcatataagatgtcgtt 16333598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 2831750 - 2831825
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||| ||||| |||| |||||||    
T  2831750 aattttgacctaacttactttgaccatatttttctactaatatacaaatataaataatatcatgtaagatgtcgtt 2831825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 18504515 - 18504590
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| | ||| ||| |||||||| |||||||||||||||| ||||| |||||||||| |||||||    
T  18504515 aattttgacgtaacttattttgaccatatttttctactaatatacaaagatcaataatatcatataagatgtcgtt 18504590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 31603436 - 31603369
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||  |||||||| ||||||||||||| |||||||| ||||||||||    
T  31603436 aattttgacctaacttactttgacaatatttttctactaatatacaaatataaataatatcatataag 31603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 43328821 - 43328754
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||| ||||| ||| |||||||| |||||||||||||||||||||| || |||||||    
T  43328821 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatattatataag 43328754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 45036406 - 45036481
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||  | ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  45036406 aattttgacttaacttacgctgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 45036481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 4137478 - 4137527
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  4137478 tatttttctactaatatacaaagataaataatatcatataagatgtcgtt 4137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 15177422 - 15177487
Alignment:
Q  213 taactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| ||||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  15177422 taacttactttgaccatatttttatactaatatacaaagataaataatatcatataagatgtcgtt 15177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 5096291 - 5096366
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| | ||| | | |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  5096291 aattttgacataacttattttgatcatatttttctactaatatataaagataaataatatcatataagatgtcgtt 5096366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 5861581 - 5861510
Alignment:
Q  207 ttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||   |||| |||||||||||| ||||||||||| | |||||||| |||||||||| |||||||    
T  5861581 ttgacctaacatgctttgaccgtatttttccactaatatacacaaataaataatatcatataagatgtcgtt 5861510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 6730123 - 6730056
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || || || ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  6730123 aattttgacctagcttacattgaccatatttttctactaatatacatagataaataatatcatataag 6730056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 22718563 - 22718496
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||| | |||||||||| ||||||||||    
T  22718563 aattttgacctagcttactttgaccatatttttctactaatatatatagataaataatatcatataag 22718496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 40471779 - 40471854
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| | ||| | | |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  40471779 aattttgacttaacttattttgatcatatttttttactaatatacaaagataaataatatcatataagatgtcgtt 40471854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 41575605 - 41575680
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||| || ||||| | | |||||||| ||||||||||| | |||||||| |||||||||| |||||||    
T  41575605 aattttgacctagcttactttgatcatatttttctactaatatacatatataaataatatcatataagatgtcgtt 41575680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 32776209 - 32776160
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatata 268  Q
    |||||| || |||||||| |||||||||||||||||||||| ||||||||    
T  32776209 actttagccatatttttctactaatatacaaagataaataatatcatata 32776160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 37806843 - 37806892
Alignment:
Q  221 tttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||| |||||||| |||||||||||||||||||||| || |||||||    
T  37806843 tttaaccatatttttctactaatatacaaagataaataatattatataag 37806892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 44022311 - 44022384
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcg 276  Q
    |||||| |||||||| ||||| ||  |||||||| |||||||||||||||||| ||| || ||||||| |||||    
T  44022311 aattttaacctaacttactttgactatatttttctactaatatacaaagataattaaaattatataagatgtcg 44022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 37987956 - 37987884
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| |||| | ||||| | | |||||||  |||||||||||||||||||||| |||||||||| ||||    
T  37987956 aattttgatctaagttactttgatcatatttttttactaatatacaaagataaataatatcatataagatgtc 37987884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 5030351 - 5030394
Alignment:
Q  227 cgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||  |||||||||||||||||||||| ||||||||||    
T  5030351 cgtatttttatactaatatacaaagataaataatatcatataag 5030394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 6075168 - 6075243
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||  ||||| ||||| ||| |||||||| | ||||||||||||||||||||  ||||||| | |||||||    
T  6075168 aattttgatttaacttactttgaccatatttttctattaatatacaaagataaataatgtcatatacgatgtcgtt 6075243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 15771078 - 15771027
Alignment:
Q  227 cgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||| | ||||||| |||||||||||| |||||||||| |||||||    
T  15771078 cgtatttttctattaatatataaagataaataatatcatataagatgtcgtt 15771027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 16646289 - 16646356
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| |||||||| || |||||||||| | ||||||||    
T  16646289 aattttgacctagcttactttgaccatatttttctactaatattcatagataaataataccatataag 16646356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 25277929 - 25277886
Alignment:
Q  227 cgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||  |||||||||||||||||||||| ||||||||||    
T  25277929 cgtatttttatactaatatacaaagataaataatatcatataag 25277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 37316919 - 37316994
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||   | ||||| ||| ||| |||| ||||||||||| |||||||||| |||||||||| |||||||    
T  37316919 aattttgacctggtttactttgaccatatatttctactaatatacatagataaataatatcatataagatgtcgtt 37316994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 13399165 - 13399215
Alignment:
Q  220 ctttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||| |||||| ||||||||||||||| ||||| ||||    
T  13399165 ctttaaccatatttttctactaatttacaaagataaataatatcatgtaag 13399215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 21271787 - 21271821
Alignment:
Q  240 taatatacaaagataaataacatcatataagttgt 274  Q
    |||||||||||||||||||| ||||||||||||||    
T  21271787 taatatacaaagataaataatatcatataagttgt 21271821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 25762263 - 25762309
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| | |||||||||||||||||||| |||||||||| ||||    
T  25762263 tatttttctattaatatacaaagataaataatatcatataagatgtc 25762309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 11384039 - 11383990
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||||||||| |||||||||||| ||||| |||| |||||||    
T  11384039 tatttttctactaatatataaagataaataatatcatgtaagatgtcgtt 11383990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 41319906 - 41319869
Alignment:
Q  241 aatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  41319906 aatatacaaagataaataatatcatataagatgtcgtt 41319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 5117503 - 5117384
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    ||||||||||||||||||||||||||  |||||| ||       |||||||| |||| ||||||| || |||||||||||||||||||||||||||||||    
T  5117503 tacttcctccgtcccttaatacttgactcatttgaaatttttttaattttgatctaattgactttgactgtatttttcaactaatatacaaagataaata 5117404  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  5117403 acatcatataagatgtcgtt 5117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 44963741 - 44963622
Alignment:
Q  159 tacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaata 258  Q
    |||| ||||||||| ||||||||||| | |||| |||       ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  44963741 tactccctccgtcctttaatacttgaccaatttagaatttttttaattttgacctaactgattttgaccgtatttttcaactaatatacaaagataaata 44963642  T
Q  259 acatcatataagttgtcgtt 278  Q
    |||||||||||| |||||||    
T  44963641 acatcatataagatgtcgtt 44963622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 26477034 - 26476959
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  26477034 aattttgacataactgattttgaccgtatttttcaactaatatacaaagataaataacaccatataagatgtcgtt 26476959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 5606416 - 5606341
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  5606416 aattttgatctaacttactttaaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 5606341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 10100538 - 10100463
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  10100538 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 10100463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1821653 - 1821578
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  1821653 aattttgacctaacttactttgaccatatttttccattaatatacaaagataaataatatcatataagatgtcgtt 1821578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 6017474 - 6017399
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  6017474 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 6017399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 7075355 - 7075280
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  7075355 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 7075280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 10124152 - 10124227
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| || ||||||| |||||||    
T  10124152 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatattatataagatgtcgtt 10124227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 26543911 - 26543986
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| || ||||||| |||||||    
T  26543911 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatattatataagatgtcgtt 26543986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 45299361 - 45299436
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  45299361 aattttgacctaacttactttgaccatatttttatactaatatacaaagataaataatatcatataagatgtcgtt 45299436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 5945808 - 5945883
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||| | | ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  5945808 aattttgacataatttattttaaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 5945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 43453190 - 43453115
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  43453190 aattttgacctaacttattttgaccatatttttctattaatatacaaagataaataatatcatataagatgtcgtt 43453115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 44452238 - 44452313
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| ||||| |||||||||| ||||| |||||||||| |||||||    
T  44452238 aattttgacctaacttactttgaccatatttttctactaacatacaaagatgaataatatcatataagatgtcgtt 44452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 44741386 - 44741461
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  44741386 aattttgatctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 44741461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 49903710 - 49903635
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| | ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  49903710 aattttgacctaatttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 49903635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 52749324 - 52749399
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||| |||||||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  52749324 aatttttacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 52749399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 40058994 - 40058917
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatata--caaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| ||||| |||||||||||| |||||||||  ||||||||||||| |||||||||| |||||||    
T  40058994 aattttgatctaacttactttgaccgtatttttctactaatatatacaaagataaataatatcatataagatgtcgtt 40058917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 52688572 - 52688649
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaacta--atatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| || ||||||||| ||||  |||||||||||||||||| |||||||||| |||||||    
T  52688572 aattttgacctaacttactttgactgtatttttctactataatatacaaagataaataatatcatataagatgtcgtt 52688649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 23337853 - 23337917
Alignment:
Q  206 tttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  23337853 tttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatatcatataag 23337917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 2139046 - 2138979
Alignment:
Q  211 cctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  2139046 cctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 2138979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 38786971 - 38786904
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||  ||||| ||||| | | ||||||||||||||||||||||||||||||| ||||||||||    
T  38786971 aattttgatataacttactttgatcatatttttcaactaatatacaaagataaataatatcatataag 38786904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 40883454 - 40883521
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| | | |||||||||||||||||||||| |||||||  ||||||||||    
T  40883454 aattttgacctaacttactttgatcatatttttcaactaatatacaaatataaatagtatcatataag 40883521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 41855746 - 41855679
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  41855746 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 41855679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 44240562 - 44240629
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  44240562 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 44240629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 48389109 - 48389176
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  48389109 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 48389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 50014586 - 50014511
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||| || ||||| ||| |||||||| ||||||||||| |||||||||| |||||||||| |||||||    
T  50014586 aattttgatctagcttactttgaccatatttttctactaatatacatagataaataatatcatataagatgtcgtt 50014511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 31651900 - 31651851
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  31651900 tatttttctactaatatacaaagataaataatatcatataagatgtcgtt 31651851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 41414246 - 41414311
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatata 268  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||    
T  41414246 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatata 41414311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 8048773 - 8048706
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || | ||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  8048773 aattttgacctagcttattttgaccatatttttctactaatatacatagataaataatatcatataag 8048706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 27990762 - 27990825
Alignment:
Q  207 ttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||  ||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  27990762 ttgacctaacatactttgaccatatttttctactaatatacaaaaataaataacatcatgtaag 27990825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 31932203 - 31932136
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||  | ||||| ||| |||||||| ||||||||||||| |||||||| ||||||||||    
T  31932203 aattttgacctagtttactttgaccatatttttctactaatatacaaatataaataatatcatataag 31932136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 36035729 - 36035804
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||| | ||||| | | |||||||| |||||||||||||||||||||| |||||||||  |||||||    
T  36035729 aattttgatctaatttactttgatcatatttttctactaatatacaaagataaataatatcatataaaatgtcgtt 36035804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 47912324 - 47912391
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| ||| | | ||| ||| |||||||| |||||||||||||||||||||| ||||||||||    
T  47912324 aattttgacataatttattttgaccatatttttctactaatatacaaagataaataatatcatataag 47912391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 48312095 - 48312146
Alignment:
Q  227 cgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||| |||||||||||||||||||||| || ||||||| |||||||    
T  48312095 cgtatttttctactaatatacaaagataaataatattatataaggtgtcgtt 48312146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 4489130 - 4489179
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| ||||||||||| |||||||||| |||||||||| |||||||    
T  4489130 tatttttctactaatatacacagataaataatatcatataagatgtcgtt 4489179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 23393291 - 23393350
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| ||| |||||||  ||||||||||||| |||||||| |||||||||| |||||||    
T  23393291 actttgaccatatttttatactaatatacaaatataaataatatcatataagatgtcgtt 23393350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 30005816 - 30005766
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||||| | |||||||| ||||||||||||| |||||||| |||||||||    
T  30005816 actttaatcatatttttctactaatatacaaaaataaataatatcatataa 30005766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 32968181 - 32968223
Alignment:
Q  228 gtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||  |||||||||||||||||||||| ||||||||||    
T  32968181 gtatttttatactaatatacaaagataaataatatcatataag 32968223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 43590912 - 43590946
Alignment:
Q  240 taatatacaaagataaataacatcatataagttgt 274  Q
    |||||||||||||||||||| ||||||||||||||    
T  43590912 taatatacaaagataaataatatcatataagttgt 43590946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 3555273 - 3555314
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||||||||||||||| ||| ||||||    
T  3555273 tatttttctactaatatacaaagataaataatatcttataag 3555314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 32495236 - 32495199
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcata 266  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  32495236 tatttttcgactaatatacaaagataaataatatcata 32495199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 50295935 - 50295894
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||  ||||||||||||||||||||| ||||||||||    
T  50295935 tatttttctgctaatatacaaagataaataatatcatataag 50295894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 33526187 - 33526115
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||||||| |||| | ||||| ||  |||||||| ||||||||||||| ||||||||  ||||||||| ||||    
T  33526187 aattttgatctaatttactttgactatatttttctactaatatacaaaaataaataatttcatataagatgtc 33526115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 33730219 - 33730163
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||| ||||| ||||||||| |||||||   |||||||| ||||||||||||    
T  33730219 aattttgacataacttactttaaccatatttttatgctaatatataaagataaataa 33730163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 9997934 - 9997821
Alignment:
Q  164 cctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatc 263  Q
    ||||||||||||||||||||||| ||||  ||       |||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  9997934 cctccgtcccttaatacttgatctattta-aatttttttaattttaacctaaatgactttgaccgtatttttcaactaatatacaaagataaataacatc 9997836  T
Q  264 atataagttgtcgtt 278  Q
    |||||||||||||||    
T  9997835 atataagttgtcgtt 9997821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 10232501 - 10232426
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10232501 aattttaacctaaatgactttgaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 10232426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 44821545 - 44821470
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  44821545 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaataacatcatatgagatgtcgtt 44821470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 10228789 - 10228670
Alignment:
Q  158 atacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    ||||||||||||||||||||||||||| | ||||  ||       |||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  10228789 atacttcctccgtcccttaatacttgacctattta-aatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 10228691  T
Q  258 aacatcatataagttgtcgtt 278  Q
    ||||||||||||||| |||||    
T  10228690 aacatcatataagttttcgtt 10228670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 12250348 - 12250421
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12250348 aattttgacctaactgactg--accgtatttttcaactaatatacaaagataaataacatcatataagatgtcgtt 12250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 9484639 - 9484714
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  9484639 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 9484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 12948083 - 12948158
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  12948083 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 12948158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 20144938 - 20144863
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  20144938 aattttgaactaattgattttgaccgtatttttcaactaatatataaagataaataacatcatataagatgtcgtt 20144863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 29455724 - 29455649
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  29455724 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 29455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 29793394 - 29793319
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  29793394 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 29793319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 32961289 - 32961364
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  32961289 aattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatatcatataagttgtcgtt 32961364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 34263720 - 34263645
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  34263720 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 34263645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 42098643 - 42098568
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  42098643 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 42098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 49076442 - 49076367
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  49076442 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 49076367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 53019824 - 53019938
Alignment:
Q  155 ataatacttcctccgtcccttaatacttgatccatttggaannnnnnnaattttgacctaactgactttaaccgtatttttcaactaatatacaaagata 254  Q
    |||||||| | ||||||||||||||||| ||||||||||||       ||||||||||||| ||  ||| || |||||||||||||||||| ||||||||    
T  53019824 ataatactccttccgtcccttaatactt-atccatttggaatatttttaattttgacctaattggttttgactgtatttttcaactaatatgcaaagata 53019922  T
Q  255 aataacatcatataag 270  Q
    |||||||| |||||||    
T  53019923 aataacattatataag 53019938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 34555196 - 34555269
Alignment:
Q  205 ttttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  34555196 ttttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 34555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 901104 - 901029
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  901104 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 901029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 34669651 - 34669726
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  34669651 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 34669726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 48927818 - 48927743
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||| |||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  48927818 aatttttacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 48927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 50673720 - 50673795
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  50673720 aattttgacttaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 50673795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 4945867 - 4945800
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  4945867 aattttgacctaacttactttgaccatatttttctactaatatacatagataaataatatcatataag 4945800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 16434873 - 16434798
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||||    
T  16434873 aattttgacctaacttattttgaccatatttttttactaatatacaaagataaataatatcatataagatgtcgtt 16434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 26759522 - 26759589
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  26759522 aattttgacctaacttactttgaccatatttttctactaatatacatagataaataatatcatataag 26759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 28959015 - 28958940
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  28959015 aattttgacctagcttactttgaccatatttttctactaatatataaagataaataatatcatataagatgtcgtt 28958940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 29720438 - 29720513
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| | | |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  29720438 aattttgacctaacttactttgatcctatttttccactaatatataaagataaataatatcatataagatgtcgtt 29720513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 52094110 - 52094035
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  52094110 aattttgatctaacttaatttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 52094035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 53055641 - 53055566
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| ||||| |||| |||||||    
T  53055641 aattttgacctaactaattttgaccatatttttctactaatatacaaagataaataatatcatttaagatgtcgtt 53055566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 23631601 - 23631541
Alignment:
Q  210 acctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||  ||||| |||||||||||| |||||||||||||||||||||| ||||||||||    
T  23631601 acctaacatactttgaccgtatttttctactaatatacaaagataaataatatcatataag 23631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 38833981 - 38833925
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||    
T  38833981 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 38833925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 18013486 - 18013411
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||| | ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  18013486 aattttgacataatttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 18013411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 36179152 - 36179077
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||| | ||||| | | |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  36179152 aattttgacttaatttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 36179077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 36364779 - 36364712
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| | ||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  36364779 aattttgacctaacttattttgaccatatttttctactaatatacatagataaataatatcatataag 36364712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 53275011 - 53274944
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| | ||| | | |||||||| |||||||||||||||||||||| ||||||||||    
T  53275011 aattttgacctaacttattttgatcatatttttctactaatatacaaagataaataatatcatataag 53274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 10107668 - 10107614
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaat 257  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  10107668 aattttaacctaaatgactttgaccgtatttttcaactaatatacaaatataaat 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 33462748 - 33462814
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataa 269  Q
    |||||||| |||||| ||||||||  || ||||| |||||||||||||||||||||| |||||||||    
T  33462748 aattttgatctaacttactttaactatacttttctactaatatacaaagataaataatatcatataa 33462814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 49818800 - 49818864
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatat 267  Q
    ||||||||||||| | ||||| ||| |||||||| ||||||||||| |||||||||| |||||||    
T  49818800 aattttgacctaatttactttgaccatatttttctactaatatacatagataaataatatcatat 49818864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 54684662 - 54684606
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataagttgtcgttcga 281  Q
    |||||||||||| |||||||||||||||||||||| || ||||||| ||| ||||||    
T  54684662 accgtatttttctactaatatacaaagataaataatattatataagatgttgttcga 54684606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1334311 - 1334236
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||||| | ||| ||| |||||||  |||||||||||||||||||| | |||||||||| |||||||    
T  1334311 aattttgatctaacttaattttaccatatttttttactaatatacaaagataaatgatatcatataagatgtcgtt 1334236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 1778404 - 1778471
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| || || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  1778404 aattttgacttagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 1778471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 2643285 - 2643218
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||  | ||||| ||| |||||||| ||||||||||||| |||||||| ||||||||||    
T  2643285 aattttgacctagtttactttgaccatatttttctactaatatacaaatataaataatatcatataag 2643218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 4229204 - 4229129
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||| || ||||| | | |||||||  ||||||||||| |||||||||| |||||||||| |||||||    
T  4229204 aattttgacctagcttactttgatcatatttttttactaatatacatagataaataatatcatataagatgtcgtt 4229129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 43370334 - 43370409
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| | |||||||||  |||||||||||||||||||||| || | ||||| |||||||    
T  43370334 aattttgacataacttactttgatcgtatttttatactaatatacaaagataaataatattacataagatgtcgtt 43370409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 46866386 - 46866453
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||||||||| | |||  |  |||||||| |||||||||||||||||||||| ||||||||||    
T  46866386 aattttgacctaacttattttggcaatatttttctactaatatacaaagataaataatatcatataag 46866453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 47340100 - 47340025
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| |||| | ||||| | | |||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  47340100 aattttgatctaatttactttgatcatatttttctactaatatataaagataaataatatcatataagatgtcgtt 47340025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 10819434 - 10819385
Alignment:
Q  228 gtatttttcaactaatatacaaagataaataacatcatataagttgtcgt 277  Q
    ||||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  10819434 gtatttttctactaatatacacagataaataatatcatataagatgtcgt 10819385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 48690245 - 48690204
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  48690245 tatttttctactaatatacaaagataaataatatcatataag 48690204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 14751042 - 14751002
Alignment:
Q  238 actaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  14751042 actaatatacaaagataaataatatcatataagatgtcgtt 14751002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 43394574 - 43394502
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtc 275  Q
    |||| ||| |||||| | ||| ||| |||||||| ||||||| |||||||||||||| |||||||||| ||||    
T  43394574 aattctgatctaacttattttgaccatatttttctactaataaacaaagataaataatatcatataagatgtc 43394502  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 47069449 - 47069505
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||||  ||||| || ||||||||| ||| ||||||||||||||||||    
T  47069449 aattttgacctaacctactttgactgtatttttctactgatatacaaagataaataa 47069505  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 50035113 - 50035169
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||||| ||||| ||| | |||||  ||||||||||||||||||||||    
T  50035113 aattttgacctaacttactttgaccatgtttttatactaatatacaaagataaataa 50035169  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 3086343 - 3086292
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||| ||| |||||||  |||||||||||||||||||||| ||||||||||    
T  3086343 actttgaccatatttttttactaatatacaaagataaataatatcatataag 3086292  T

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Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 34680240 - 34680291
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  34680240 actttgaccatatttttctactaatatacatagataaataatatcatataag 34680291  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 35322389 - 35322350
Alignment:
Q  231 tttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  35322389 ttttttaactaatatacaaagataaataatatcatataag 35322350  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 38878494 - 38878427
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    ||||||||| ||| | | ||| ||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  38878494 aattttgacataaattattttgaccatatttttctactaatataaaaagataaataatatcatataag 38878427  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 46763955 - 46763989
Alignment:
Q  240 taatatacaaagataaataacatcatataagttgt 274  Q
    |||||||||||||||||||| ||||||||||||||    
T  46763955 taatatacaaagataaataatatcatataagttgt 46763989  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 1325563 - 1325498
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatata 268  Q
    |||||| |||||||| ||||| |   |||||||| ||||||||| |||||||||||| ||||||||    
T  1325563 aattttaacctaacttactttgattatatttttctactaatatataaagataaataatatcatata 1325498  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 21489965 - 21490026
Alignment:
Q  207 ttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatata 268  Q
    ||||||||||  ||||| |||||||||||  | |||||||||||||||||||| || |||||    
T  21489965 ttgacctaacatactttgaccgtatttttttattaatatacaaagataaataatatgatata 21490026  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 37166547 - 37166592
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| ||||||||| |||||||||||| || |||||||    
T  37166547 accgtatttttccactaatataaaaagataaataatattatataag 37166592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 5030048 - 5030088
Alignment:
Q  219 actttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  5030048 actttgaccgtacttttctactaatatacaaagataaataa 5030088  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 8437191 - 8437223
Alignment:
Q  238 actaatatacaaagataaataacatcatataag 270  Q
    |||||||||||||||||||||| ||||||||||    
T  8437191 actaatatacaaagataaataatatcatataag 8437223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 8440545 - 8440577
Alignment:
Q  238 actaatatacaaagataaataacatcatataag 270  Q
    |||||||||||||||||||||| ||||||||||    
T  8440545 actaatatacaaagataaataatatcatataag 8440577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 36594435 - 36594359
Alignment:
Q  203 aattttgacctaactgactttaaccgtattttt-caactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| | | ||||||| | | ||||||| |||||||||||| |||||||||| |||||||    
T  36594435 aattttgacctaacttattttgatcatattttttctattaatatataaagataaataatatcatataagatgtcgtt 36594359  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 50888414 - 50888454
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataa 269  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  50888414 tatttttctgctaatatacaaagataaataatatcatataa 50888454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 5419 - 5494
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  5419 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 5494  T

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Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 184009 - 184084
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  184009 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 184084  T

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Target: scaffold0500 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 696 - 621
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  696 aattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgtt 621  T

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Target: scaffold0069 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 4484 - 4554
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttg 273  Q
    ||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||||| || ||||||||||    
T  4484 aattttgacctaacttattttgaccgtatttttctactaatatgcaaagataaataatattatataagttg 4554  T

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Target: scaffold1248 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1477 - 1402
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| ||| |||||||| ||||||||||||| |||||||| |||||||||  |||||||    
T  1477 aattttgacataacttactttgaccatatttttctactaatatacaaaaataaataatatcatataatatgtcgtt 1402  T

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Target: scaffold0952 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 836 - 911
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||||||| ||||| ||||| ||| |||||||| ||||||||||||| |||||||| |||||||||  |||||||    
T  836 aattttgacataacttactttgaccatatttttctactaatatacaaaaataaataatatcatataatatgtcgtt 911  T

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Target: scaffold0281 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 13147 - 13214
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||| || ||||| ||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  13147 aattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataag 13214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 1054 - 1099
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataag 270  Q
    |||||||||||  |||||||||||||||||||||| ||||||||||    
T  1054 accgtatttttatactaatatacaaagataaataatatcatataag 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 9196 - 9242
Alignment:
Q  232 ttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    ||||| ||||| |||||||||||||||| |||||||||| |||||||    
T  9196 ttttctactaacatacaaagataaataatatcatataagatgtcgtt 9242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 3064 - 3113
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataagttgtcgtt 278  Q
    |||||||| | |||||||| ||||||||||| |||||||||| |||||||    
T  3064 tatttttctattaatatactaagataaataatatcatataagatgtcgtt 3113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 23970 - 23916
Alignment:
Q  203 aattttgacctaactgactttaaccgtatttttcaactaatatacaaagataaataa 259  Q
    ||||||||||||||| ||||| | |||||||||| ||||||||  ||||||||||||    
T  23970 aattttgacctaacttactttgatcgtatttttctactaatat--aaagataaataa 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 24199 - 24143
Alignment:
Q  225 accgtatttttcaactaatatacaaagataaataacatcatataagttgtcgttcga 281  Q
    |||||||||||| ||||||||||||||||| |||| || ||| ||| | ||||||||    
T  24199 accgtatttttctactaatatacaaagatagataatattatacaagatatcgttcga 24143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 145638 - 145675
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcata 266  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  145638 tatttttctactaatatacaaagataaataatatcata 145675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 45196 - 45236
Alignment:
Q  229 tatttttcaactaatatacaaagataaataacatcatataa 269  Q
    |||||||| ||| |||||||||||||||||| |||||||||    
T  45196 tatttttctacttatatacaaagataaataatatcatataa 45236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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