View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5360-Insertion-9 (Length: 123)
Name: NF5360-Insertion-9
Description: NF5360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5360-Insertion-9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 116; Significance: 2e-59; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 34023384 - 34023499
Alignment:
| Q |
8 |
gcattaacaaatgtgggctatgtttgttggtgtaggtatgttgttcgttgggaaattgattatgagaattattatgatattcctttgttttcatacaaac |
107 |
Q |
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| T |
34023384 |
gcattaacaaatgtgggctatgtttgttggtgtaggtatgttgttcgttgggaaattgattatgagaattattatgatattcctttgttttcatacaaac |
34023483 |
T |
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| Q |
108 |
aaggatcttttcctcc |
123 |
Q |
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|||||||||||||||| |
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| T |
34023484 |
aaggatcttttcctcc |
34023499 |
T |
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