View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5360_high_7 (Length: 260)
Name: NF5360_high_7
Description: NF5360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5360_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 40867224 - 40866995
Alignment:
| Q |
12 |
caaaggaaccaaatccacatgcaccagctgaaatgagttcaaaagagcataaatataagagagaacatgtttacaaatatcatttcatgtttgcattttt |
111 |
Q |
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| T |
40867224 |
caaaggaaccaaatccacatgcaccagctgaaatgaattcaaaagagcataaatataaaagagaacatgtttacaaatatcatttcatgtttgcattttt |
40867125 |
T |
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| Q |
112 |
gttattttttatcagttttcttactatctgtgccgttttcttcagagtttgggtaaaatgatgcatgagattgaacaaaacaatcggtgcatgaagtatc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40867124 |
gttattttttatcagttttcttactatctgtgccgttttcttcagagtttgggtaaaatgatgcatgagattgaacaaaacaatcggtgcatgaagtatc |
40867025 |
T |
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| Q |
212 |
tgctagggtttgcatgaaaagaaaggtggc |
241 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
40867024 |
tgctagggtttgcatgaaaagaaaggtggc |
40866995 |
T |
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