View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5363_low_14 (Length: 236)

Name: NF5363_low_14
Description: NF5363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5363_low_14
NF5363_low_14
[»] chr3 (69 HSPs)
chr3 (1-221)||(5326643-5326878)
chr3 (86-181)||(44414019-44414117)
chr3 (126-188)||(51760207-51760270)
chr3 (86-179)||(1927497-1927593)
chr3 (86-188)||(16894209-16894314)
chr3 (87-188)||(22995735-22995839)
chr3 (89-179)||(38446787-38446879)
chr3 (88-188)||(40760769-40760872)
chr3 (86-181)||(40326434-40326532)
chr3 (102-219)||(40504078-40504194)
chr3 (102-181)||(40504078-40504160)
chr3 (136-216)||(54680538-54680614)
chr3 (86-181)||(29076521-29076619)
chr3 (86-175)||(39975144-39975234)
chr3 (126-216)||(44435189-44435276)
chr3 (86-219)||(47931686-47931817)
chr3 (112-189)||(13083893-13083973)
chr3 (86-179)||(14626676-14626772)
chr3 (85-181)||(39530441-39530540)
chr3 (83-188)||(37331593-37331700)
chr3 (85-221)||(43898103-43898238)
chr3 (86-188)||(29352767-29352872)
chr3 (86-181)||(34935534-34935632)
chr3 (82-181)||(40326484-40326586)
chr3 (136-181)||(8126389-8126434)
chr3 (136-181)||(14626677-14626722)
chr3 (136-181)||(16894219-16894264)
chr3 (136-181)||(32833726-32833771)
chr3 (136-189)||(51204521-51204574)
chr3 (136-181)||(51204532-51204577)
chr3 (136-181)||(51760215-51760260)
chr3 (126-181)||(7933564-7933620)
chr3 (126-189)||(34205601-34205665)
chr3 (86-179)||(43883911-43884007)
chr3 (86-179)||(46967505-46967601)
chr3 (136-188)||(47342631-47342683)
chr3 (126-181)||(54680535-54680591)
chr3 (84-189)||(54726049-54726157)
chr3 (86-149)||(17004954-17005020)
chr3 (127-181)||(32589354-32589409)
chr3 (136-216)||(34205578-34205654)
chr3 (137-220)||(43797061-43797144)
chr3 (88-180)||(55198608-55198703)
chr3 (136-178)||(5326793-5326835)
chr3 (86-181)||(16127744-16127842)
chr3 (86-181)||(17501401-17501499)
chr3 (86-181)||(22995692-22995790)
chr3 (126-216)||(32589330-32589417)
chr3 (86-180)||(38446735-38446832)
chr3 (120-181)||(39530427-39530489)
chr3 (86-179)||(48906175-48906269)
chr3 (126-216)||(53717912-53717999)
chr3 (85-154)||(1453381-1453453)
chr3 (106-179)||(7680135-7680211)
chr3 (136-181)||(8126386-8126431)
chr3 (136-181)||(13083917-13083962)
chr3 (101-219)||(23783312-23783429)
chr3 (179-216)||(50623124-50623161)
chr3 (105-178)||(7680168-7680244)
chr3 (126-181)||(19679000-19679056)
chr3 (126-181)||(21659184-21659240)
chr3 (86-179)||(25990645-25990741)
chr3 (86-179)||(32956414-32956510)
chr3 (86-179)||(33638962-33639058)
chr3 (136-221)||(34935548-34935629)
chr3 (136-188)||(38569990-38570042)
chr3 (126-181)||(44435212-44435268)
chr3 (86-179)||(54008255-54008351)
chr3 (80-149)||(54690428-54690500)
[»] chr7 (66 HSPs)
chr7 (86-221)||(48392876-48393010)
chr7 (86-216)||(46658747-46658876)
chr7 (86-181)||(30005872-30005970)
chr7 (83-189)||(7208702-7208811)
chr7 (127-221)||(32389164-32389256)
chr7 (86-220)||(27234869-27235002)
chr7 (105-181)||(48590631-48590710)
chr7 (136-216)||(27940760-27940836)
chr7 (80-181)||(24166309-24166414)
chr7 (136-222)||(12171668-12171750)
chr7 (136-189)||(12307855-12307908)
chr7 (127-216)||(46578304-46578390)
chr7 (83-179)||(16100211-16100310)
chr7 (86-178)||(24166259-24166354)
chr7 (86-179)||(26153963-26154059)
chr7 (86-179)||(28324716-28324812)
chr7 (86-181)||(1565458-1565556)
chr7 (126-181)||(18732258-18732313)
chr7 (90-181)||(22332343-22332437)
chr7 (102-225)||(35481792-35481921)
chr7 (126-221)||(45833228-45833320)
chr7 (126-216)||(3498309-3498396)
chr7 (126-216)||(19531991-19532078)
chr7 (126-216)||(33471505-33471592)
chr7 (86-181)||(35160795-35160893)
chr7 (126-216)||(46658770-46658857)
chr7 (86-179)||(6580501-6580597)
chr7 (136-189)||(45967646-45967699)
chr7 (85-181)||(10595537-10595636)
chr7 (127-219)||(11032342-11032431)
chr7 (86-175)||(16100159-16100251)
chr7 (136-188)||(24166155-24166207)
chr7 (86-179)||(26153911-26154007)
chr7 (126-181)||(27940783-27940839)
chr7 (86-216)||(28003174-28003303)
chr7 (86-216)||(35593637-35593766)
chr7 (86-179)||(39976092-39976188)
chr7 (126-208)||(43067062-43067146)
chr7 (139-183)||(45967641-45967685)
chr7 (120-216)||(46221110-46221203)
chr7 (86-219)||(3341886-3342017)
chr7 (126-216)||(16086241-16086327)
chr7 (120-215)||(27942341-27942433)
chr7 (105-181)||(30005922-30006001)
chr7 (86-181)||(31758529-31758627)
chr7 (144-183)||(31758540-31758579)
chr7 (86-181)||(36711585-36711683)
chr7 (126-216)||(1565450-1565537)
chr7 (85-179)||(2927181-2927278)
chr7 (100-179)||(6837583-6837665)
chr7 (126-208)||(24211574-24211653)
chr7 (126-208)||(35593664-35593743)
chr7 (126-216)||(46477148-46477235)
chr7 (85-179)||(4187987-4188084)
chr7 (139-188)||(23736051-23736100)
chr7 (89-154)||(26743190-26743258)
chr7 (127-208)||(33471529-33471607)
chr7 (86-160)||(35160745-35160822)
chr7 (92-222)||(48392868-48392997)
chr7 (136-181)||(48590634-48590679)
chr7 (86-179)||(4027266-4027362)
chr7 (126-181)||(11032349-11032405)
chr7 (86-176)||(18732209-18732301)
chr7 (131-208)||(20353121-20353194)
chr7 (86-179)||(28324768-28324864)
chr7 (126-181)||(47778467-47778523)
[»] chr1 (81 HSPs)
chr1 (86-189)||(6169848-6169955)
chr1 (86-178)||(1358168-1358263)
chr1 (87-188)||(10008818-10008922)
chr1 (86-188)||(40907218-40907323)
chr1 (93-178)||(34598911-34598999)
chr1 (86-216)||(48605085-48605214)
chr1 (93-221)||(23392540-23392667)
chr1 (86-181)||(21852433-21852531)
chr1 (86-221)||(21909837-21909971)
chr1 (86-216)||(52253553-52253682)
chr1 (84-149)||(4523016-4523084)
chr1 (89-181)||(12993523-12993618)
chr1 (86-179)||(16426956-16427052)
chr1 (120-216)||(27549077-27549170)
chr1 (104-219)||(34598877-34598990)
chr1 (127-182)||(47293289-47293345)
chr1 (86-181)||(4682983-4683081)
chr1 (85-181)||(34037966-34038065)
chr1 (86-178)||(40907175-40907270)
chr1 (85-180)||(4974092-4974190)
chr1 (78-181)||(12062182-12062288)
chr1 (86-220)||(31634398-31634536)
chr1 (85-179)||(38149412-38149509)
chr1 (86-175)||(7230111-7230203)
chr1 (136-201)||(17622812-17622877)
chr1 (86-216)||(25378272-25378401)
chr1 (86-179)||(42761281-42761377)
chr1 (86-179)||(50008892-50008988)
chr1 (120-183)||(1358216-1358280)
chr1 (86-179)||(4974042-4974137)
chr1 (86-179)||(34662401-34662497)
chr1 (86-179)||(37215220-37215316)
chr1 (86-216)||(37255141-37255270)
chr1 (86-179)||(42788376-42788472)
chr1 (136-221)||(42788377-42788458)
chr1 (86-216)||(46590835-46590964)
chr1 (86-179)||(47991773-47991869)
chr1 (126-181)||(48605108-48605164)
chr1 (101-181)||(1252142-1252225)
chr1 (136-179)||(6785067-6785110)
chr1 (136-179)||(24015057-24015100)
chr1 (100-189)||(28237110-28237201)
chr1 (86-181)||(34037916-34038014)
chr1 (100-188)||(37215182-37215273)
chr1 (126-221)||(47011282-47011374)
chr1 (102-181)||(50998316-50998398)
chr1 (126-216)||(8751470-8751557)
chr1 (100-179)||(17387660-17387742)
chr1 (126-216)||(25378295-25378382)
chr1 (84-179)||(27146072-27146170)
chr1 (126-216)||(31909787-31909874)
chr1 (85-179)||(31919888-31919985)
chr1 (86-181)||(35049928-35050026)
chr1 (86-181)||(37255122-37255220)
chr1 (127-221)||(38824301-38824392)
chr1 (86-181)||(39015559-39015657)
chr1 (86-172)||(40237590-40237679)
chr1 (127-221)||(52253577-52253668)
chr1 (136-181)||(4798933-4798978)
chr1 (138-179)||(9135569-9135610)
chr1 (136-181)||(12447503-12447548)
chr1 (86-221)||(16426904-16427038)
chr1 (86-183)||(32067560-32067660)
chr1 (86-179)||(38847298-38847394)
chr1 (126-216)||(39181064-39181153)
chr1 (136-189)||(42914585-42914638)
chr1 (86-179)||(45011536-45011631)
chr1 (136-181)||(47293296-47293341)
chr1 (86-216)||(2091742-2091871)
chr1 (86-179)||(15285290-15285386)
chr1 (120-179)||(15311504-15311564)
chr1 (126-181)||(21852483-21852539)
chr1 (86-179)||(26040428-26040524)
chr1 (126-181)||(27549091-27549147)
chr1 (136-221)||(28237121-28237201)
chr1 (136-188)||(34120953-34121005)
chr1 (85-181)||(38824286-38824385)
chr1 (127-216)||(39181088-39181176)
chr1 (126-189)||(45239029-45239093)
chr1 (126-181)||(46590885-46590941)
chr1 (86-179)||(47912568-47912664)
[»] chr5 (64 HSPs)
chr5 (81-181)||(14064801-14064904)
chr5 (86-221)||(9984931-9985065)
chr5 (85-181)||(34186401-34186500)
chr5 (91-181)||(21916928-21917021)
chr5 (105-216)||(14571023-14571132)
chr5 (120-216)||(37554379-37554472)
chr5 (87-179)||(13461547-13461642)
chr5 (86-181)||(38860846-38860944)
chr5 (86-189)||(9004985-9005091)
chr5 (86-181)||(43585491-43585589)
chr5 (86-181)||(43585541-43585639)
chr5 (85-179)||(13461598-13461695)
chr5 (86-179)||(7276119-7276215)
chr5 (120-216)||(37685002-37685095)
chr5 (93-181)||(42480480-42480571)
chr5 (136-216)||(14416421-14416497)
chr5 (104-220)||(27990371-27990486)
chr5 (127-181)||(31787264-31787319)
chr5 (86-181)||(34102071-34102169)
chr5 (120-181)||(11784332-11784394)
chr5 (86-181)||(14064856-14064954)
chr5 (127-188)||(14416445-14416507)
chr5 (86-181)||(14571004-14571102)
chr5 (86-181)||(21163576-21163674)
chr5 (86-181)||(34186351-34186449)
chr5 (89-188)||(40905863-40905965)
chr5 (85-179)||(13359156-13359253)
chr5 (91-181)||(15966644-15966737)
chr5 (91-181)||(15966689-15966782)
chr5 (86-179)||(16056741-16056837)
chr5 (86-188)||(31947446-31947551)
chr5 (126-181)||(21152634-21152690)
chr5 (126-181)||(21159769-21159825)
chr5 (86-179)||(21344497-21344593)
chr5 (126-181)||(31787256-31787312)
chr5 (126-181)||(36137061-36137117)
chr5 (105-181)||(37637284-37637363)
chr5 (105-181)||(38860815-38860894)
chr5 (86-161)||(4151147-4151225)
chr5 (125-216)||(7336892-7336980)
chr5 (105-188)||(13420449-13420535)
chr5 (86-181)||(13420480-13420578)
chr5 (86-181)||(24433581-24433679)
chr5 (136-208)||(24433584-24433652)
chr5 (127-181)||(34102121-34102176)
chr5 (86-150)||(35172426-35172493)
chr5 (105-181)||(36964245-36964324)
chr5 (86-181)||(36964276-36964374)
chr5 (179-221)||(29112294-29112336)
chr5 (85-179)||(33545859-33545956)
chr5 (120-181)||(40208509-40208571)
chr5 (127-183)||(5243373-5243430)
chr5 (86-188)||(8694479-8694584)
chr5 (136-181)||(42480523-42480568)
chr5 (86-179)||(5089501-5089597)
chr5 (86-179)||(5226015-5226111)
chr5 (86-179)||(8618393-8618489)
chr5 (126-189)||(12165322-12165386)
chr5 (126-181)||(21152626-21152682)
chr5 (126-181)||(21159761-21159817)
chr5 (126-181)||(21163568-21163624)
chr5 (125-188)||(34147977-34148041)
chr5 (126-181)||(36329118-36329174)
chr5 (126-189)||(39916323-39916387)
[»] chr4 (94 HSPs)
chr4 (86-181)||(24529619-24529717)
chr4 (86-216)||(41788936-41789065)
chr4 (86-179)||(18592341-18592437)
chr4 (84-177)||(24156133-24156229)
chr4 (86-216)||(50038465-50038594)
chr4 (86-216)||(50045687-50045816)
chr4 (86-179)||(38616458-38616554)
chr4 (86-221)||(44639756-44639890)
chr4 (127-181)||(43635875-43635930)
chr4 (86-188)||(4711402-4711507)
chr4 (86-179)||(23795626-23795723)
chr4 (138-221)||(46779345-46779424)
chr4 (86-181)||(50038446-50038544)
chr4 (86-181)||(50045668-50045766)
chr4 (94-189)||(53402995-53403093)
chr4 (86-181)||(33084763-33084860)
chr4 (136-188)||(45890971-45891023)
chr4 (136-188)||(46996523-46996575)
chr4 (136-216)||(24331440-24331516)
chr4 (105-181)||(24529588-24529667)
chr4 (80-181)||(54675316-54675419)
chr4 (86-181)||(9968297-9968395)
chr4 (86-222)||(16391948-16392083)
chr4 (86-124)||(25250874-25250912)
chr4 (120-181)||(32112360-32112422)
chr4 (86-189)||(35003106-35003212)
chr4 (86-192)||(43965001-43965110)
chr4 (86-179)||(2994769-2994865)
chr4 (127-216)||(11583746-11583832)
chr4 (86-179)||(23795574-23795670)
chr4 (127-216)||(29978507-29978593)
chr4 (86-221)||(34709585-34709719)
chr4 (86-179)||(35967429-35967525)
chr4 (86-164)||(37381114-37381195)
chr4 (99-157)||(37431960-37432021)
chr4 (106-179)||(53410984-53411060)
chr4 (125-181)||(53508546-53508603)
chr4 (125-181)||(53551632-53551689)
chr4 (101-181)||(86199-86282)
chr4 (85-181)||(4711452-4711551)
chr4 (86-179)||(20787604-20787700)
chr4 (126-181)||(29978530-29978586)
chr4 (104-181)||(30162657-30162737)
chr4 (86-179)||(34709571-34709667)
chr4 (86-179)||(35003158-35003254)
chr4 (86-179)||(39923816-39923912)
chr4 (89-181)||(44551244-44551339)
chr4 (136-188)||(45070883-45070935)
chr4 (86-179)||(51394094-51394190)
chr4 (81-188)||(9802954-9803063)
chr4 (126-216)||(12721660-12721748)
chr4 (126-216)||(12721683-12721771)
chr4 (127-181)||(19754254-19754309)
chr4 (127-181)||(19785497-19785552)
chr4 (126-221)||(44639784-44639876)
chr4 (136-183)||(45070878-45070925)
chr4 (136-179)||(53684833-53684876)
chr4 (126-221)||(55501240-55501332)
chr4 (100-179)||(55616825-55616907)
chr4 (100-179)||(55624129-55624211)
chr4 (126-216)||(13743873-13743960)
chr4 (86-222)||(16391441-16391576)
chr4 (86-181)||(16391720-16391818)
chr4 (92-183)||(16450203-16450297)
chr4 (126-216)||(17659503-17659590)
chr4 (126-216)||(25856025-25856112)
chr4 (85-188)||(26206589-26206695)
chr4 (126-216)||(30051381-30051468)
chr4 (86-181)||(39294169-39294267)
chr4 (86-201)||(46779322-46779438)
chr4 (126-216)||(52256780-52256867)
chr4 (92-178)||(54569405-54569494)
chr4 (95-181)||(54675275-54675364)
chr4 (85-179)||(9011793-9011890)
chr4 (105-183)||(9802930-9803011)
chr4 (86-179)||(36469919-36470015)
chr4 (86-179)||(40545344-40545439)
chr4 (85-179)||(45861000-45861097)
chr4 (136-181)||(45890968-45891013)
chr4 (86-155)||(48472750-48472822)
chr4 (136-181)||(52256788-52256833)
chr4 (86-221)||(55131532-55131666)
chr4 (136-221)||(5048445-5048526)
chr4 (86-179)||(8014179-8014275)
chr4 (126-216)||(15133865-15133959)
chr4 (126-181)||(17028279-17028335)
chr4 (86-179)||(18592393-18592489)
chr4 (141-181)||(26677013-26677053)
chr4 (86-163)||(31914392-31914472)
chr4 (126-181)||(32112352-32112408)
chr4 (86-159)||(34166108-34166184)
chr4 (86-179)||(35207435-35207531)
chr4 (126-181)||(41788959-41789015)
chr4 (86-216)||(56420427-56420556)
[»] chr6 (36 HSPs)
chr6 (84-195)||(5301911-5302025)
chr6 (92-181)||(3212243-3212335)
chr6 (88-221)||(15467571-15467703)
chr6 (126-216)||(31577454-31577541)
chr6 (86-216)||(9908151-9908280)
chr6 (92-189)||(15467611-15467711)
chr6 (85-181)||(21478599-21478698)
chr6 (86-181)||(667724-667822)
chr6 (85-181)||(3418802-3418901)
chr6 (85-181)||(5433377-5433476)
chr6 (86-181)||(3343823-3343921)
chr6 (85-151)||(13853039-13853108)
chr6 (85-179)||(29938345-29938442)
chr6 (86-181)||(3343773-3343871)
chr6 (85-179)||(29318096-29318193)
chr6 (126-216)||(32786154-32786241)
chr6 (86-179)||(25363733-25363829)
chr6 (127-216)||(31577478-31577564)
chr6 (86-179)||(32364012-32364108)
chr6 (84-181)||(3418751-3418850)
chr6 (126-181)||(9908174-9908230)
chr6 (85-181)||(31759370-31759469)
chr6 (126-180)||(667775-667830)
chr6 (127-181)||(6048002-6048057)
chr6 (86-150)||(7498427-7498494)
chr6 (83-216)||(19687482-19687614)
chr6 (83-216)||(32786131-32786263)
chr6 (105-163)||(28737842-28737903)
chr6 (86-188)||(2693701-2693806)
chr6 (105-179)||(12349863-12349940)
chr6 (86-136)||(13853464-13853516)
chr6 (86-180)||(13902019-13902116)
chr6 (120-216)||(7418890-7418983)
chr6 (112-181)||(21478575-21478647)
chr6 (86-178)||(25363786-25363877)
chr6 (86-179)||(26597213-26597309)
[»] chr8 (47 HSPs)
chr8 (86-188)||(35063457-35063561)
chr8 (86-221)||(43483928-43484062)
chr8 (84-219)||(44282259-44282393)
chr8 (86-179)||(1647088-1647184)
chr8 (96-181)||(5040074-5040162)
chr8 (85-181)||(34188364-34188463)
chr8 (86-181)||(44838820-44838918)
chr8 (90-216)||(42631794-42631917)
chr8 (86-179)||(1647036-1647132)
chr8 (86-179)||(2827352-2827448)
chr8 (127-216)||(34194599-34194685)
chr8 (86-221)||(43483942-43484076)
chr8 (85-181)||(3611815-3611914)
chr8 (126-221)||(5419525-5419617)
chr8 (86-180)||(9203431-9203528)
chr8 (86-181)||(26492355-26492453)
chr8 (86-181)||(34188314-34188412)
chr8 (126-216)||(37922827-37922914)
chr8 (85-179)||(41569549-41569646)
chr8 (105-181)||(3611784-3611863)
chr8 (86-181)||(5040114-5040210)
chr8 (86-175)||(35201928-35202020)
chr8 (126-181)||(40802249-40802305)
chr8 (136-179)||(15754483-15754526)
chr8 (86-181)||(40802199-40802297)
chr8 (136-179)||(41569550-41569593)
chr8 (86-179)||(9331337-9331430)
chr8 (127-188)||(32032988-32033050)
chr8 (86-181)||(32032995-32033093)
chr8 (153-216)||(33761000-33761059)
chr8 (126-216)||(34194575-34194662)
chr8 (126-216)||(37922850-37922937)
chr8 (126-216)||(38883961-38884048)
chr8 (86-181)||(39655413-39655511)
chr8 (86-181)||(44838770-44838868)
chr8 (86-208)||(5419511-5419632)
chr8 (108-181)||(9203402-9203478)
chr8 (112-181)||(26492331-26492403)
chr8 (86-149)||(36826962-36827027)
chr8 (127-216)||(40716785-40716871)
chr8 (83-181)||(42631772-42631873)
chr8 (104-177)||(2552848-2552924)
chr8 (86-183)||(5918215-5918315)
chr8 (126-181)||(8568866-8568922)
chr8 (86-179)||(13832469-13832565)
chr8 (126-181)||(27781922-27781978)
chr8 (128-216)||(35447799-35447884)
[»] scaffold1786 (1 HSPs)
scaffold1786 (93-221)||(520-647)
[»] chr2 (64 HSPs)
chr2 (86-181)||(32070457-32070555)
chr2 (85-189)||(42579057-42579164)
chr2 (86-179)||(14152186-14152282)
chr2 (86-179)||(3463198-3463294)
chr2 (85-179)||(18967272-18967369)
chr2 (126-208)||(20195312-20195391)
chr2 (86-181)||(30202480-30202578)
chr2 (120-181)||(34466144-34466206)
chr2 (85-179)||(35567191-35567283)
chr2 (85-216)||(40739507-40739637)
chr2 (86-216)||(20195285-20195414)
chr2 (86-179)||(35567144-35567234)
chr2 (87-179)||(44949390-44949485)
chr2 (126-188)||(25668449-25668512)
chr2 (86-181)||(29573860-29573958)
chr2 (127-181)||(29771757-29771812)
chr2 (126-216)||(4898180-4898267)
chr2 (126-216)||(4945574-4945661)
chr2 (126-208)||(29771741-29771820)
chr2 (86-181)||(37486045-37486143)
chr2 (86-181)||(38532443-38532541)
chr2 (179-220)||(604868-604909)
chr2 (127-216)||(24971244-24971330)
chr2 (93-179)||(85732-85822)
chr2 (126-189)||(2795348-2795412)
chr2 (86-175)||(4101944-4102036)
chr2 (136-188)||(5204931-5204983)
chr2 (85-179)||(7993145-7993241)
chr2 (126-181)||(27327876-27327932)
chr2 (86-220)||(31596808-31596941)
chr2 (136-221)||(32473481-32473562)
chr2 (86-179)||(42230570-42230666)
chr2 (136-216)||(2795359-2795435)
chr2 (136-179)||(31619819-31619862)
chr2 (86-181)||(4898161-4898259)
chr2 (86-181)||(4945555-4945653)
chr2 (120-189)||(10041580-10041650)
chr2 (126-216)||(26269331-26269418)
chr2 (126-216)||(27327868-27327955)
chr2 (101-179)||(31596808-31596889)
chr2 (86-160)||(33425364-33425441)
chr2 (126-208)||(34240862-34240948)
chr2 (126-216)||(34911113-34911200)
chr2 (126-208)||(36490502-36490581)
chr2 (136-181)||(85733-85778)
chr2 (86-176)||(19250165-19250258)
chr2 (85-179)||(21208940-21209037)
chr2 (86-188)||(25899354-25899459)
chr2 (86-188)||(29573810-29573915)
chr2 (136-189)||(31619820-31619873)
chr2 (101-181)||(17378101-17378184)
chr2 (120-216)||(17843966-17844059)
chr2 (86-154)||(18461446-18461518)
chr2 (86-179)||(18967220-18967316)
chr2 (136-221)||(20128793-20128874)
chr2 (139-179)||(27692650-27692690)
chr2 (126-181)||(32070507-32070563)
chr2 (86-179)||(33363555-33363651)
chr2 (86-179)||(33363607-33363703)
chr2 (89-216)||(36490479-36490604)
chr2 (126-181)||(40320178-40320234)
chr2 (86-179)||(42230518-42230614)
chr2 (136-221)||(42579068-42579149)
chr2 (86-179)||(44949338-44949434)
[»] scaffold0047 (3 HSPs)
scaffold0047 (86-221)||(65930-66064)
scaffold0047 (86-216)||(65916-66045)
scaffold0047 (88-160)||(63436-63511)
[»] scaffold0018 (2 HSPs)
scaffold0018 (105-179)||(48888-48964)
scaffold0018 (90-179)||(48920-49012)
[»] scaffold0136 (1 HSPs)
scaffold0136 (85-179)||(22439-22536)
[»] scaffold0111 (1 HSPs)
scaffold0111 (85-216)||(38002-38132)
[»] scaffold0036 (2 HSPs)
scaffold0036 (85-178)||(36459-36555)
scaffold0036 (86-179)||(36406-36502)
[»] scaffold0013 (2 HSPs)
scaffold0013 (120-219)||(58332-58428)
scaffold0013 (102-177)||(58350-58428)
[»] scaffold0009 (1 HSPs)
scaffold0009 (86-189)||(49701-49807)
[»] scaffold0635 (1 HSPs)
scaffold0635 (120-189)||(5420-5490)
[»] scaffold0236 (1 HSPs)
scaffold0236 (105-179)||(13710-13786)
[»] scaffold0121 (1 HSPs)
scaffold0121 (86-179)||(17430-17526)


Alignment Details
Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5326643 - 5326878
Alignment:
Q  1 accgccatgacctaccccaatcatttggtttagaaaacataactttagtcaaggatgataaattttgactaagatggataagatttactccctccgt--- 97  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       
T  5326643 accgccatgacctactccaataatttggtttagaaaacataactttagtcaaggatgataaattttgactaagatgaataagatttactccctccgttac 5326742  T
Q  98 ----------tattaattataagtaaaattgattttt--agttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaattaatt 185  Q
              |||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5326743 taattataagtattaattataattaaaattgattttttaggttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaattaatt 5326842  T
Q  186 gaatgaatcttaaaaataaaattcgcttataattaa 221  Q
     ||||||||| |||||||||||| ||||||||||||    
T  5326843 aaatgaatctaaaaaataaaatttgcttataattaa 5326878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 44414117 - 44414019
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| ||| |||| ||||||||||||||||||| |||||   ||||||| ||| |||||||||||||||| ||||| || |||||||||||||||||||    
T  44414117 tactgccttcgtttttaattataagtaaaattggttttttaggttcattaaattaatgatgtatgtgatttatattttggattacatacatcattaatt 44414019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 51760207 - 51760270
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  51760207 gttcattcaattaatgatgtatgtgattcatattatgaaccacatacatcattaattaaatgaa 51760270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 1927497 - 1927593
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||| |||||||  ||| ||||||||||||| ||||||  |||||||||| | ||||||||||||| | |||||||||||| ||||||||||||||    
T  1927497 tactctctccgtttctaaatataagtaaaatttattttttaagttcattcatttaatgatgtatgtggtccatattatgaatcacatacatcattaa 1927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 16894314 - 16894209
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||  |||||||| ||||||| || ||||||| ||||||||||||||| |||| ||||||| ||||||| |||||||||    
T  16894314 tactccctccgtttttaaatataaacaaaattgactttttagatttattcaattaatgatgtatgtgatccataatatgaatcacatacaccattaatta 16894215  T
Q  183 attgaa 188  Q
    | ||||    
T  16894214 aatgaa 16894209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 22995839 - 22995735
Alignment:
Q  87 actccctccgttattaattataagtaaaatt-gatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    |||||||||||| |||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| |||||||||| ||  ||||||||||||||||||    
T  22995839 actccctccgtttttaaatataagcaaattttgctttttaggttcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattaa 22995740  T
Q  184 ttgaa 188  Q
     ||||    
T  22995739 atgaa 22995735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 38446879 - 38446787
Alignment:
Q  89 tccctccgttattaattataagtaaaattga-tttttag-ttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||| |||| ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| |||| |  | ||||||||||||    
T  38446879 tccctccgtttttaaatataagtaaaattgactttttaggttcattcattaatgatgtatgtggttcataatatggaccatatacatcattaa 38446787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 40760769 - 40760872
Alignment:
Q  88 ctccctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaattaat 184  Q
    |||||||||||  ||| ||||||||||||||||||||   |||||||||| |||| ||||||||  ||||||||||| || |||||||||| |||||||     
T  40760769 ctccctccgtttctaaatataagtaaaattgattttttaggttcattcaattaataatgtatgtagttcatattatggatcacatacatcaataattaaa 40760868  T
Q  185 tgaa 188  Q
    ||||    
T  40760869 tgaa 40760872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 40326434 - 40326532
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| || |||| ||||| |||||||||  |||||  |||||||||| ||||||||||||| |||||||||| ||  ||||||||||||||||    
T  40326434 tactccctccatttttaaatataaataaaattgacttttttgattcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaatt 40326532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 40504194 - 40504078
Alignment:
Q  102 aattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaa 198  Q
    ||||||||| ||| |||| |||||| ||||||||||| ||| |||||||||||| |||||||| || ||||||||||||    ||||||||||| |||||    
T  40504194 aattataagcaaatttgactttttatgttcattcaattaataatgtatgtgatttatattatggatcacatacatcatt----aattgaatgaaccttaa 40504099  T
Q  199 aaataaaattcgcttataatt 219  Q
    |||| |||||  |||||||||    
T  40504098 aaatcaaatttacttataatt 40504078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 40504078 - 40504160
Alignment:
Q  102 aattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| ||||||||||  ||||||||||| ||||||||||||||| |||| ||| ||| |||||||| |||||||    
T  40504078 aattataagtaaatttgatttttaaggttcattcaattaatgatgtatgtgatccataatataaatcacatacattattaatt 40504160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 54680538 - 54680614
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||||||||||| |||| | ||||||||||    |||||||||||||| || |||||||||||| |||||||    
T  54680538 taatgatgtatgtgattcataatatggactacatacatc----attaattgaatgaacctaaaaaataaaatttgcttata 54680614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 29076521 - 29076619
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgat-tttta-gttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||| |||| |||||||||||||||| ||||| |||||||||| ||||||| ||||||||| |||| ||| |  ||||||||||||||||    
T  29076521 tacttcctccgtttttaaatataagtaaaattgatcttttaggttcattcaattaatgatatatgtgatttatatcatggaccacatacatcattaatt 29076619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 39975234 - 39975144
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgatttttagttcattca-ataatgatgtatgtgattcatattatgaattacatacatca 175  Q
    ||||||||||||| |||| ||||||||||| ||||||| |||| ||| |  |||||||||||||| | |||||||||||  ||||||||||    
T  39975234 tactccctccgtttttaaatataagtaaaaatgattttaagtttatttatttaatgatgtatgtggtccatattatgaaccacatacatca 39975144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 44435276 - 44435189
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||||||  ||||||||||||    ||||||||||| || |||||||||||| |||||||    
T  44435276 gttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcatt----aattgaatgaacctaaaaaataaaatttgcttata 44435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 47931686 - 47931817
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgat-ttttag-ttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    |||||| ||||||  || |||||| |||| ||||| |||||| |||||||||| ||||| |||||| ||||||||||| | ||||||||||    |||||    
T  47931686 tactccttccgtttctagttataaataaatttgatgttttaggttcattcaattatgatatatgtggttcatattatggactacatacatc----attaa 47931781  T
Q  184 ttgaatgaatcttaaaaataaaattcgcttataatt 219  Q
    |||||| || || |||||| ||||| ||||||||||    
T  47931782 ttgaataaacctaaaaaattaaatttgcttataatt 47931817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 13083893 - 13083973
Alignment:
Q  112 aaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    |||||||||||||   ||||||||||| ||||||||||||  ||||||||||| || |||||||||||||||||| |||||    
T  13083893 aaaattgattttttaggttcattcaattaatgatgtatgttgttcatattatggatcacatacatcattaattaaatgaat 13083973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 14626772 - 14626676
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||  | |||||||||| ||||||||||||| |||||| ||||||  ||||||||||||||    
T  14626772 tactccctccgtctttaaatataagcaaaattgactttttaaattcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaa 14626676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 39530540 - 39530441
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| || |||| |||||| ||||||||  ||||| ||||||||||| ||||||||||||| |  ||| ||||||  ||||||||||||||||    
T  39530540 ttactccctccatttttaaatataagcaaaattgactttttttgttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt 39530441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 37331593 - 37331700
Alignment:
Q  83 atttactccctccgttattaattataagtaaaattgatttttag-ttcattcaataa-tgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    ||||||| |||||||  |||| |||||||||| |||| |||||| |||||||| ||| ||||||||||| | |||||||| ||  ||||||||||||||     
T  37331593 atttactacctccgtctttaaatataagtaaatttgacttttaggttcattcattaaatgatgtatgtggtccatattataaaccacatacatcattaaa 37331692  T
Q  181 taattgaa 188  Q
    ||| ||||    
T  37331693 taaatgaa 37331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 43898238 - 43898103
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| | || |||||| ||| |||||||||   |||| | |||| ||||||||||||| ||||||||||| |  | ||||||||||        
T  43898238 ttactccctccgttctaaaatataagcaaatttgattttttaggttcgtccaattaatgatgtatgtggttcatattatggaccatatacatcatt---- 43898143  T
Q  182 aattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||||||| |||| ||||||| ||||||| ||||    
T  43898142 aattgaatgaatctaaaaagtaaaatttgcttatatttaa 43898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 29352872 - 29352767
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| ||||||||||||| ||||||   |||||||||  |||||||||||||| || ||| |||| || |||||||| ||||| ||    
T  29352872 tactccctccgtttttaaatataagtaaaatttattttttaggttcattcatttaatgatgtatgtggttaataatatggatcacatacattattaaata 29352773  T
Q  183 attgaa 188  Q
    | ||||    
T  29352772 aatgaa 29352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 34935534 - 34935632
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| ||||||| |||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| | |||||| ||||| ||||||||||||||||    
T  34935534 tactctctccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtccatattttgaatcacatacatcattaatt 34935632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 40326586 - 40326484
Alignment:
Q  82 gatttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    ||||||||||||||||    || |||||| |||||||| ||||||| |||||||||| ||||||||||||| || ||| ||||||  |||||||||||||    
T  40326586 gatttactccctccgtatcaaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtggtttataatatgaaccacatacatcatta 40326487  T
Q  179 att 181  Q
    |||    
T  40326486 att 40326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 8126389 - 8126434
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  8126389 taatgatgtatgtggttcatattatgaaacacatacatcattaatt 8126434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 14626677 - 14626722
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  14626677 taatgatgtatgtggttcatattatgaaccacatacatcattaatt 14626722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 16894219 - 16894264
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||    
T  16894219 taatggtgtatgtgattcatattatggatcacatacatcattaatt 16894264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 32833771 - 32833726
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||    
T  32833771 taatgatgtatgtggtccatattatgaactacatacatcattaatt 32833726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 51204574 - 51204521
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    |||||||||||||| |||||| |||| || |||||||||||||||||| |||||    
T  51204574 taatgatgtatgtggttcataatatggatcacatacatcattaattaaatgaat 51204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 51204532 - 51204577
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||    
T  51204532 taatgatgtatgtgatccatattatgaaccacatacatcattaatt 51204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 51760260 - 51760215
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  51760260 taatgatgtatgtggttcataatatgaatcacatacatcattaatt 51760215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 7933620 - 7933564
Alignment:
Q  126 gttcattcaataat-gatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| || |||||||||||| |||||||| ||| ||||||||||||||||    
T  7933620 gttcattcaattattgatgtatgtgatccatattataaatgacatacatcattaatt 7933564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 34205601 - 34205665
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| ||||||| |||||||||||| |||| |  |||||||||||||||||| |||||    
T  34205601 gttcattcaattaatgatgcatgtgattcataatatggaccacatacatcattaattaaatgaat 34205665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 43884007 - 43883911
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| ||||| ||||||| | ||||||| ||||||||  |||||||||||||| || ||| ||||||  ||||||||||||||    
T  43884007 tactccctccgtttttaaatataaataaaattaactttttaggttcattcatctaatgatgtatgtggtttataatatgaaccacatacatcattaa 43883911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 46967601 - 46967505
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||||| ||||| || | ||||||||||||| |||||| |||| | |||||||||||||||    
T  46967601 tactccctccgtctttaaatataagcaaaattgactttttaggttcatccatttaatgatgtatgtggttcataatatggactacatacatcattaa 46967505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 47342631 - 47342683
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||||||| |||||||||||  |||||||||||||| ||| ||||    
T  47342631 taatgatgtatgtgatccatattatgaaccacatacatcattaaataaatgaa 47342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 54680591 - 54680535
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||  | |||||||||||| ||||||||||||||||    
T  54680591 gttcattcaattaatgatgtatgtagtccatattatgaatcacatacatcattaatt 54680535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 54726049 - 54726157
Alignment:
Q  84 tttactccctccgttattaattataagtaaaatt-gatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    ||||||||||||||| |||| |||||| ||| || ||||||||| |||||||||| ||| || |||||| |  ||||||| ||| ||||| |||||||||    
T  54726049 tttactccctccgtttttaaatataagcaaattttgatttttaggttcattcaattaataatatatgtggtctatattataaatcacatatatcattaat 54726148  T
Q  181 taattgaat 189  Q
    ||| |||||    
T  54726149 taaatgaat 54726157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 17004954 - 17005020
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtg 149  Q
    ||||||||||||| |||| |||||| |||||||||||||   |||||||||| ||||||||||||||    
T  17004954 tactccctccgtttttaaatataagcaaaattgattttttaggttcattcaattaatgatgtatgtg 17005020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 32589354 - 32589409
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  32589354 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 32589409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 34205654 - 34205578
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||||||| | |||||||||||| |||| |||||||    ||||||||||| || |||| ||||||| |||||||    
T  34205654 taatgatgtatgtggtccatattatgaatcacatgcatcatt----aattgaatgaacctaaaaagtaaaatttgcttata 34205578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 43797144 - 43797061
Alignment:
Q  137 aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataatta 220  Q
    |||| |||||||| || ||||| ||||| |||||||||||||||| | | |||||| || |||| || |||||| |||||||||    
T  43797144 aatggtgtatgtggtttatattttgaatcacatacatcattaatttaattaatgaacctaaaaagtagaattcgtttataatta 43797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 55198608 - 55198703
Alignment:
Q  88 ctccctccgttattaattataagtaaaattga-tttttag-ttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    ||||||||||| |||| ||||||||||||||| ||||||| ||||||||  |||||||||||||  || ||| |||| |  |||||||||||||||    
T  55198608 ctccctccgtttttaaatataagtaaaattgactttttagattcattcatttaatgatgtatgttgttaataatatggaccacatacatcattaat 55198703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 5326835 - 5326793
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||    
T  5326835 taatgatgtatgtaattcataatatgaatcacatacatcatta 5326793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 16127744 - 16127842
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||| ||| ||||||| ||| ||| || | ||||||| |||||||||| ||||||||||||| | |||||||| ||  ||||||||||||||||    
T  16127744 tactccctctgtttttaattacaagcaaattttactttttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaatt 16127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 17501401 - 17501499
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||  | || ||||||||||||||| ||||||| |||||| || |||||| ||||||| ||||||||||  |  ||||||||||||||||    
T  17501401 tactccctccgtattaaaatataagtaaaattgattttttagcttcatttaattaatgaagtatgtggttcatattatagaccacatacatcattaatt 17501499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 22995692 - 22995790
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||||||| || | ||||||| |||||| ||| ||||||||||||| || ||| ||||||  ||||||||||||||||    
T  22995692 tactccctccgtttctaaatataagtaaattttactttttaggttcatttaattaatgatgtatgtggtttataatatgaaccacatacatcattaatt 22995790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 32589417 - 32589330
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||| ||||||  ||||||||||||    |||||||||||||| |||| | ||||| |||||||    
T  32589417 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcatt----aattgaatgaatctaaaaagtcaaatttgcttata 32589330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 38446735 - 38446832
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    |||| |||||||  |||| |||||| ||||||||  |||| |||||||||| | |||||||||| || | |||||||||||  |||||||||||||||    
T  38446735 tactacctccgtctttaaatataagcaaaattgaccttttaagttcattcatttaatgatgtatatggtccatattatgaaccacatacatcattaat 38446832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 39530427 - 39530489
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||    
T  39530427 ttttaagttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaatt 39530489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 48906269 - 48906175
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgatttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| |||||| |||| |||||| |||||| | |||  ||||||||| | ||| ||||||||| |||||||||| ||  ||||||||||||||    
T  48906269 tactccatccgtttttaaatataagcaaaatttactttaggttcattcatttaataatgtatgtggttcatattataaaccacatacatcattaa 48906175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 53717999 - 53717912
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||||||  ||||||| |    |||||||||| ||| || |||||||||||| |||||||    
T  53717999 gttcattcaattaatgatgtatgtggtccatattatgaaccacatacacc----attaattgaaagaacctaaaaaataaaatttgcttata 53717912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 1453381 - 1453453
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattc-aataatgatgtatgtgattca 154  Q
    |||||||||||||| | ||||||||| |||||||||||||   |||||||| | |||||||||||||| ||||    
T  1453381 ttactccctccgttctaaattataagcaaaattgattttttaggttcattcgattaatgatgtatgtggttca 1453453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 7680135 - 7680211
Alignment:
Q  106 ataagtaaaattgattttt--agttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||||||||  |||| ||| | ||||||||||||||| |||||| |||| |  ||||||||||||||    
T  7680135 ataagtaaaattgattttttaagtttatttatataatgatgtatgtggttcataatatggaccacatacatcattaa 7680211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 8126431 - 8126386
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||||    
T  8126431 taatgatgtatgtgtttcataatatgaaccacatacatcattaatt 8126386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 13083962 - 13083917
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||||    
T  13083962 taatgatgtatgtgatccataatatgaacaacatacatcattaatt 13083917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 23783429 - 23783312
Alignment:
Q  101 taattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatctta 197  Q
    |||||||||| ||| ||||  ||||| || |||||||| ||||||||||||| ||||||||||| |  | ||||||||||    |||||||||||| | |    
T  23783429 taattataaggaaatttgagttttttggtccattcaattaatgatgtatgtggttcatattatggaccatatacatcatt----aattgaatgaatttaa 23783334  T
Q  198 aaaataaaattcgcttataatt 219  Q
    | ||| ||||| ||||||||||    
T  23783333 acaattaaatttgcttataatt 23783312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 50623124 - 50623161
Alignment:
Q  179 attaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  50623124 attaattgaatgaatctaaaaaataaaatttgcttata 50623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 7680244 - 7680168
Alignment:
Q  105 tataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    ||||||||||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  |||||||||||||    
T  7680244 tataagtaaaattcactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcatta 7680168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 19679000 - 19679056
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| ||||||  ||| | |||||||||||||||||    
T  19679000 gttcattcaattaatgatgtatgtggttcataacatggactacatacatcattaatt 19679056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 21659240 - 21659184
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||| |||||| |  ||||||||||| ||||||||||||||||    
T  21659240 gttcattcaattaatgatatatgtggtctatattatgaatcacatacatcattaatt 21659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 25990645 - 25990741
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttagttca-ttcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||| | |||||||| ||||||| ||| |||| | ||||||||||||| |  ||||||||||  ||||||||||||||    
T  25990645 tactccctccgtttttaaatatatgcaaaattgactttttaggtcaattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaa 25990741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 32956414 - 32956510
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| |||||||| |||| |||||| |||||||| ||||||| |||||| | | ||||||||||||| | |||||||| ||||| ||| ||||||||    
T  32956414 tacttcctccgtttttaaatataagcaaaattgactttttaggttcatttatttaatgatgtatgtggtccatattattaattatatatatcattaa 32956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 33639058 - 33638962
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||| ||||||  | ||||||||||||    
T  33639058 tactccctccgtttttaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggtccatagtatgaaccatatacatcattaa 33638962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 34935629 - 34935548
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||||||||||| | |||| |  ||||||||||||    ||||||||||| || |||| ||||||| ||||||| ||||    
T  34935629 taatgatgtatgtgattcaaaatatggaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatatttaa 34935548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 38570042 - 38569990
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||||||||||||||||||||||||  ||||| || ||||| ||| ||||    
T  38570042 taatgatgtatgtgattcatattatgaacaacatatattattaaataaatgaa 38569990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 44435212 - 44435268
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    
T  44435212 gttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt 44435268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 54008351 - 54008255
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||||||| |||||| |||||||||  ||||||||||| || | |||||| | ||  ||||||||||||||    
T  54008351 tactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatatggtccatattgttaaccacatacatcattaa 54008255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 54690428 - 54690500
Alignment:
Q  80 aagatttactccctccgttattaattataagtaaaattga-ttttta-gttcattcaa-taatgatgtatgtg 149  Q
    ||||| ||||||||||||| |||| |||||| ||| |||| |||||| |||||||||| ||||||||||||||    
T  54690428 aagatgtactccctccgttcttaaatataagcaaatttgactttttatgttcattcaattaatgatgtatgtg 54690500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 48393010 - 48392876
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||| |||||||||||||| ||| || | ||||  |||||||||||| ||||||||||||| |  ||||||||||| |||||||||| ||||||    
T  48393010 tactccctccattattaattataagcaaattttactttttaagttcattcaattaatgatgtatgtggtatatattatgaatcacatacatcactaatta 48392911  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
        ||||||||| |||| ||||||| ||||||||||||    
T  48392910 ----aatgaatctaaaaagtaaaatttgcttataattaa 48392876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 46658876 - 46658747
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| | || |||||| ||| || | ||||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||||    |    
T  46658876 tactccctccgttttaaaatataagcaaattttactttttagattcattcaattaatgatgtatgtgttccatattatgaattacatacatcatt----a 46658781  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  46658780 attgaatgaacctaaaaagtaaaatttgcttata 46658747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 30005872 - 30005970
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||||||||||||  ||||| |||||||||| |||||| ||||||| |  ||| ||||||| ||||||||||||||||    
T  30005872 tactccctccgtttttaaatataagtaaaattgacttttttggttcattcaattaatgacgtatgtggtctataatatgaatcacatacatcattaatt 30005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 7208811 - 7208702
Alignment:
Q  83 atttactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||||  ||| |||||| |||||||| ||||  |||||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  7208811 atttactccctccgtttctaaatataagaaaaattgactttttgagttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 7208712  T
Q  180 ttaattgaat 189  Q
     ||| |||||    
T  7208711 ataaatgaat 7208702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 32389256 - 32389164
Alignment:
Q  127 ttcattcaataa-tgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||   |||||| || ||| |||||||| ||||||| ||||    
T  32389256 ttcattcaataaatgatgtatgtgattcatattataaaccacatacatcattaattaa---aatgaacctaaaatataaaatttgcttatatttaa 32389164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 27235002 - 27234869
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||  |||||||||||||| |||| |||||| |||||||||| ||||||| |||||| |||||||| | ||  || ||||||    ||||    
T  27235002 tactccctccgttgctaattataagtaaatttgactttttaggttcattcaattaatgatatatgtggttcatattgtaaaccacttacatc----atta 27234907  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataatta 220  Q
    |||||||||| || |||| ||||||| |||||||||||    
T  27234906 attgaatgaacctaaaaagtaaaatttgcttataatta 27234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 48590710 - 48590631
Alignment:
Q  105 tataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  48590710 tataagtaaatttgactttttaagttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaatt 48590631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 27940836 - 27940760
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||||||||| |||||||||||  ||||||||||||    ||||||||||| || |||||||||||| |||||||    
T  27940836 taatgatgtatgtgatccatattatgaaccacatacatcatt----aattgaatgaacctaaaaaataaaatttgcttata 27940760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 24166414 - 24166309
Alignment:
Q  80 aagatttactccctccgt-tattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatca 175  Q
    ||||| |||||||||||| | |||| |||||  |||||||||||||  ||||||||||| |||||||||||||||| |||| ||||||  ||||| ||||    
T  24166414 aagatgtactccctccgtattttaaatataaacaaaattgattttttaagttcattcaactaatgatgtatgtgatccataatatgaaccacatatatca 24166315  T
Q  176 ttaatt 181  Q
    ||||||    
T  24166314 ttaatt 24166309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 12171750 - 12171668
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaat 222  Q
    ||||||||||| |||| |||||||| || ||||||||||||||||||    ||||||||| |||| ||||||| |||||| ||||||    
T  12171750 taatgatgtatatgatccatattataaactacatacatcattaatta----aatgaatctaaaaagtaaaatttgcttattattaat 12171668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 12307908 - 12307855
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||    
T  12307908 taatgatgtatgtggttcatattatggattacatacatcattaaataaatgaat 12307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 46578304 - 46578390
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||||||||||||| || |||||||||| ||||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  46578304 ttcattcaattaatgatgtatgtggtttatattatgaactacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 46578390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 16100310 - 16100211
Alignment:
Q  83 atttactccctccgttattaattataagtaaaattgattttt--agttcattcaataat-gatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||| ||||| |||| |||||| |||||||| ||||  | |||||||| | || |||||||||| |||||||||||||| | ||||||||||||    
T  16100310 atttactccccccgtttttaaatataagcaaaattgactttttaaattcattcatttattgatgtatgtggttcatattatgaatcatatacatcattaa 16100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 24166259 - 24166354
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    |||||||||| ||  ||| |||||| |||||||| ||||  |||||||||||| |||||| |||||| ||||||||||| || |||||||||||||    
T  24166259 tactccctccatttctaaatataagcaaaattgactttttaagttcattcaattaatgatatatgtggttcatattatggatcacatacatcatta 24166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 26154059 - 26153963
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||||| |||||||| | |||||||||||||||||||| |||| |  ||||||||||||||    
T  26154059 tactccctccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtgattcataatatggaccacatacatcattaa 26153963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 28324716 - 28324812
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||  ||| |||||| |||||||| |||||| ||||||||| | ||||||||||||| ||||||||||| || ||||| ||||||||    
T  28324716 tactccctccgtttctaaatataagcaaaattgaatttttatgttcattcatttaatgatgtatgtggttcatattatggatcacatatatcattaa 28324812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 1565556 - 1565458
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||||||  ||| |||||| |||||| ||||||   ||||||||||| ||||| ||||||||| |||||||||||  ||||||||||||||||    
T  1565556 tactccatccgtttataaatataagcaaaatttattttttaggttcattcaattaatgaagtatgtgatccatattatgaaccacatacatcattaatt 1565458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 18732313 - 18732258
Alignment:
Q  126 gttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||||||||| |||||||||| ||  ||||||||||||||||    
T  18732313 gttcattcaattatgatgtatgtggttcatattataaaccacatacatcattaatt 18732258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 22332437 - 22332343
Alignment:
Q  90 ccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||| |||| ||||||||||||| |  |||| |||||||| ||| |||||||||||||||  |||||||| || | ||||||||||||||    
T  22332437 ccctccgtttttaaatataagtaaaatttacattttaagttcattgaattaatgatgtatgtgatctatattatggatcatatacatcattaatt 22332343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 35481792 - 35481921
Alignment:
Q  102 aattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa---ttgaatgaatct 195  Q
    ||||||||||||| ||| ||||| || ||||||| || ||| ||||||||| |||||||||| ||  ||||||||||||| ||||   || |||||||||    
T  35481792 aattataagtaaatttgtttttttagcttcattcgattaataatgtatgtggttcatattataaaccacatacatcattagttaaaatttaaatgaatct 35481891  T
Q  196 taaaaataaaattcgcttataattaatgat 225  Q
     |||||| ||||| |||||||||| |||||    
T  35481892 aaaaaatcaaatttgcttataatttatgat 35481921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 45833228 - 45833320
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||| ||||||||||||| |||||| |||| | ||| ||||||||||    ||||||||||||| |||| ||||||| ||||||| ||||    
T  45833228 gttcattcaattaatgatgtatgtggttcataatatggactacgtacatcatta----attgaatgaatctaaaaagtaaaatttgcttatatttaa 45833320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 3498396 - 3498309
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||| ||  ||||||||||||||||    |||||||||| |||| ||||||| |||||||    
T  3498396 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaatt----gaatgaatctaaaaagtaaaatttgcttata 3498309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 19531991 - 19532078
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||| || ||||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  19531991 gttcattcaattaatgatgtatgtggtccatattataaactacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 19532078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 33471592 - 33471505
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |  ||| ||||||  ||||||||||||||||    |||||||||| |||||||||||| |||||||    
T  33471592 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt----gaatgaatctaaaaaataaaatttgcttata 33471505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 35160893 - 35160795
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| |||||||| |||||| ||||||||||| |||||||||| || |  ||| ||||||  ||||||||||||||||    
T  35160893 tactccctccgtttttaaatataagcaaaattgactttttaggttcattcaatgaatgatgtatttggtctataatatgaaccacatacatcattaatt 35160795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 46658770 - 46658857
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| |||||||||||| ||||||| |||| |  |||||||||    ||||||||||||||||| |||| ||||||| |||||||    
T  46658770 gttcattcaattaatgatgtatgtaattcataatatggaacacatacatc----attaattgaatgaatctaaaaagtaaaatttgcttata 46658857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 6580501 - 6580597
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| ||||||||  ||||  ||||||||| | |||||||||| ||||||||| |||| |  ||||||||||||||    
T  6580501 tactccctccgtttttaaatataagcaaaattgacattttaggttcattcatttaatgatgtatatgattcataatatgtaccacatacatcattaa 6580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 45967646 - 45967699
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||||||||||||| ||||||  |||||||||| ||||||| |||||    
T  45967646 taatgatgtatgtgattcataatatgaacaacatacatcactaattaaatgaat 45967699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 10595636 - 10595537
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattcaataa-tgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  || | ||||||||||||||| ||||  | |||||||| ||| ||||||||||| ||||||||||  | || ||||||||||||||    
T  10595636 ttactccctccgtattttaatataagtaaaattgactttttaaattcattcattaaatgatgtatgtggttcatattatagactagatacatcattaatt 10595537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 11032342 - 11032431
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataatt 219  Q
    |||||||||| ||||||||||||| ||||||||||| |  |||||||||    |||||||||||||| || |||| ||||||  ||||||||||    
T  11032342 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatc----attaattgaatgaacctaaaaagtaaaatctgcttataatt 11032431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 16100159 - 16100251
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatca 175  Q
    |||||||| |||| |||| |||||| |||||||| ||||||| |||||||| | |||||||||| ||||||||| ||||||  ||||||||||    
T  16100159 tactcccttcgtttttaaatataagcaaaattgagtttttagattcattcatttaatgatgtatatgattcataatatgaaccacatacatca 16100251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 24166207 - 24166155
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||||||| |||||||||||  |||||||||||||| ||| ||||    
T  24166207 taatgatgtatgtgatccatattatgaaccacatacatcattaaataaatgaa 24166155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 26153911 - 26154007
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| || | |||||  |||||||| ||||||| |||||| | | ||||||||||||| | |||||||||||| ||||||||||||||    
T  26153911 tactccctccgttttttaatataaacaaaattgactttttaggttcattaatttaatgatgtatgtggtccatattatgaatcacatacatcattaa 26154007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 27940783 - 27940839
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| |||||| |||| || ||||||||||||||||    
T  27940783 gttcattcaattaatgatgtatgtggttcataatatggatcacatacatcattaatt 27940839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 28003174 - 28003303
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaataat-gatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| | || |||||| ||| || | ||||||| |||||||||| || |||||||||| | |||||||| ||| |||||||||    ||||    
T  28003174 tactccctccgttttaaaatataagcaaattttactttttaggttcattcaattattgatgtatgtggtccatattataaatcacatacatc----atta 28003269  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  28003270 attgaatgaacctaaaaagtaaaatttgcttata 28003303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 35593637 - 35593766
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| |||||| | || |||||||||| || |||||| || || ||||||| ||||||||||||| | |||||||||||  |||||||||    ||||    
T  35593637 tactccatccgttttaaaatataagtaaattttattttttagatttattcaattaatgatgtatgtggtccatattatgaaccacatacatc----atta 35593732  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || ||| |||||||| |||||||    
T  35593733 attgaatgaacctaaaatataaaatttgcttata 35593766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 39976188 - 39976092
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| ||||  ||||| ||||||||||||| || |||||||| | ||||||||||||| |||||||||| |  || ||||||||||||    
T  39976188 tactccctccgtttttaaacataagcaaaattgattttttagattcattcatttaatgatgtatgtggttcatattattatatatatacatcattaa 39976092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 43067062 - 43067146
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa-ttaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| ||||||||||||| |||||| |||  |  |||||||||||||| ||||||||||||| || |||| |||||||    
T  43067062 gttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaatttaattgaatgaacctaaaaagtaaaatt 43067146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 45967685 - 45967641
Alignment:
Q  139 tgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||    
T  45967685 tgatgtatgttgttcatattatgaatcacatacatcattaattaa 45967641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 46221110 - 46221203
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||| |||||||||||| ||||||||||||| || ||| |||| |  |||||||||||||||||    |||||| || |||||||||||| |||||||    
T  46221110 ttttaagttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaatta----aatgaacctaaaaaataaaatttgcttata 46221203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 3341886 - 3342017
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||| ||||||||| |||||||||| |||||||| ||||||  |||||||||| |||||||||| || ||||||| ||| || |||||||||||||        
T  3341886 tacttcctccgttactaattataagcaaaattgactttttatattcattcaattaatgatgtatatggttcatat-atggatcacatacatcatta---- 3341980  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataatt 219  Q
    ||||||| ||  | |||||| ||||| ||||||||||    
T  3341981 attgaataaacttaaaaaattaaatttgcttataatt 3342017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 16086241 - 16086327
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |||||| |||| |  ||||||||     |||||||||||||| || |||||||||||| |||||||    
T  16086241 gttcattcaattaatgatgtatgtggttcataatatggaccacatacat-----attaattgaatgaacctaaaaaataaaatttgcttata 16086327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 27942433 - 27942341
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttat 215  Q
    |||| |||||||||||| ||||||||||||| || ||| |||| || | ||||||||||||||    |||||||||| |||| ||||||| ||||||    
T  27942433 ttttaagttcattcaattaatgatgtatgtggtttataatatggatcatatacatcattaatt----gaatgaatctaaaaagtaaaatttgcttat 27942341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 30006001 - 30005922
Alignment:
Q  105 tataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||  |  |||||| |||||||||    
T  30006001 tataagcaaaattgactttttaggttcattcaattaatgatgtatgtgattcatattatagaccacatacgtcattaatt 30005922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 31758627 - 31758529
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||||||| || ||||||  |||| ||| ||| |||||||||||||||||||| ||| ||| ||||| || |||||||    
T  31758627 tactccctccgtttctaaatataagtaaattttattttttaagtttatttaattaatgatgtatgtgattcataatataaatcacatatattattaatt 31758529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 31758540 - 31758579
Alignment:
Q  144 tatgtgattcatattatgaattacatacatcattaattaa 183  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  31758540 tatgtgatttatattatgaatcacatacatcattaattaa 31758579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 36711683 - 36711585
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| ||||| |||| || | |||||  ||||||||||| |||||| |||||| ||| |||||| ||  ||||||||||||||||    
T  36711683 tactccctccgtttttaaatataaataaattttacttttaaggttcattcaattaatgatatatgtggttcctattataaaccacatacatcattaatt 36711585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 1565450 - 1565537
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |||||| |||| || ||||||    || |||||||||||||| || ||||||||| || |||||||    
T  1565450 gttcattcaattaatgatgtatgtggttcataatatggatcacatac----ttcattaattgaatgaacctaaaaaataaattttgcttata 1565537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 2927181 - 2927278
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| | || |||||| |||||| ||||||   ||||||||| | ||||||||||||| |||||| |||| |  ||||||||||||||    
T  2927181 ttactccctccgttttaaaatataagcaaaattcattttttaggttcattcatttaatgatgtatgtggttcataatatgcaccacatacatcattaa 2927278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 6837665 - 6837583
Alignment:
Q  100 ttaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||  ||||||||||||| || |||||||||| ||| |||||| |||||||||||||| || ||||||||| ||||    
T  6837665 ttaattataaaaaaaattgatttttcagattcattcaattaataatgtatatgattcatattatggatcacatacatcgttaa 6837583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 24211653 - 24211574
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| |||||||||| |||| |||||||||||  |||||||    | ||||||||||||||||| |||| |||||||    
T  24211653 gttcattcaattaatgatgtatatgatccatattatgaaccacataca----ttattaattgaatgaatctaaaaagtaaaatt 24211574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 35593743 - 35593664
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| ||||||||||||| |||||| |||| |  ||||||||||||    |||||||| ||||| ||||||||||||    
T  35593743 gttcattcaattaatgatgtatgtggttcataatatggaccacatacatcatt----aattgaataaatctaaaaaataaaatt 35593664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 46477235 - 46477148
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||| ||  ||||||||||||    ||||||||||| || |||| ||||||| |||||||    
T  46477235 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttata 46477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 4187987 - 4188084
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| |||| ||||||||||||| | ||||||| |||||| |  |||||||| ||||| |||||| |||| |  ||||||||||||||    
T  4187987 ttactccctccgtttttaaatataagtaaaattcactttttagattcatttatttaatgatgcatgtgtttcatagtatggaccacatacatcattaa 4188084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 23736051 - 23736100
Alignment:
Q  139 tgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||| ||||| ||| |||||| ||||||||||||||||||| ||||    
T  23736051 tgatgtatatgatttataatatgaactacatacatcattaattaaatgaa 23736100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 26743258 - 26743190
Alignment:
Q  89 tccctccgttattaattataagtaaaattga--tttttagttcattca-ataatgatgtatgtgattca 154  Q
    |||||||||| |||| |||||||||||||||  |||| ||||||||||  |||||||||||||| ||||    
T  26743258 tccctccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtatgtggttca 26743190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 33471529 - 33471607
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    |||||||||| ||||||||||||| ||||||||||  |  |||||||||    |||||||||||||| || ||||||||||||    
T  33471529 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatc----attaattgaatgaacctaaaaaataaaatt 33471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 35160745 - 35160822
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattat 160  Q
    |||||| ||||||  ||| |||||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||    
T  35160745 tactccatccgtttctaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtggttcatattat 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 48392868 - 48392997
Alignment:
Q  92 ctccgttattaattataagtaaaattga-tttttag-ttcattcaataa-tgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||| ||||||||||| ||| || | ||||||| |||||| ||| | |||||||||||||||||| |||  |  |||||||||||||    ||||||    
T  48392868 ctccgtttttaattataagcaaattttactttttagattcatttaattagtgatgtatgtgattcataatatataccacatacatcatta----attgaa 48392963  T
Q  189 tgaatcttaaaaa-taaaattcgcttataattaat 222  Q
    |||| |||||||| ||||||| |||||||||||||    
T  48392964 tgaa-cttaaaaagtaaaatttgcttataattaat 48392997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 48590634 - 48590679
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||    
T  48590634 taatgatgtatgtggtccataatatgaatcacatacatcattaatt 48590679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 4027362 - 4027266
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| |||||| |||| |||||| |||||||| ||||||| |||||||| | |||||||||| ||||||||| |||  |  ||||||||||||||    
T  4027362 tactccatccgtttttaaatataagcaaaattgaatttttaggttcattcatttaatgatgtatatgattcataatatagacaacatacatcattaa 4027266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 11032405 - 11032349
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||| ||||||  ||||||||||||||||    
T  11032405 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 11032349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 18732209 - 18732301
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcat 176  Q
    |||||| |||||| |||| ||||| |||| || | |||||| |||||||||| ||||||||||||| || ||| ||||||  |||||||||||    
T  18732209 tactccatccgtttttaaatataaataaattttacttttaggttcattcaattaatgatgtatgtggtttataatatgaaccacatacatcat 18732301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 20353121 - 20353194
Alignment:
Q  131 ttcaataatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    |||| |||||||||||||| ||||||  ||| | ||||||||||    ||||||||||||||||| |||| |||||||    
T  20353121 ttcattaatgatgtatgtggttcataacatggactacatacatc----attaattgaatgaatctaaaaagtaaaatt 20353194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 28324864 - 28324768
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| ||||||  ||| |||||| |||||||| |||||| ||||||||| | |||||| |||||||| |||| ||||||  ||||||||||||||    
T  28324864 tactccatccgtttctaaatataagcaaaattgaatttttatgttcattcatttaatgatatatgtgatccataatatgaaccacatacatcattaa 28324768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 47778467 - 47778523
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||| |||||||||||| |||||||  | |||||||||||||||||    
T  47778467 gttcattcaattaataatgtatgtgatttatattatcgactacatacatcattaatt 47778523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 6169955 - 6169848
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt---agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| ||||| ||||||||||||||   |||||||||||| ||||||||||||| || |||||||  | |||||||||||||||||    
T  6169955 tactccctccgtttttaaatataaataaaattgatttttttaagttcattcaattaatgatgtatgtggttaatattattgactacatacatcattaatt 6169856  T
Q  182 aattgaat 189  Q
    || |||||    
T  6169855 aaatgaat 6169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 1358168 - 1358263
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    |||||||||||||||||| |||||||||||||||  |||| ||| |||| || |||||||||||||| | |||||||||||  |||||||||||||    
T  1358168 tactccctccgttattaaatataagtaaaattgactttttaagtacatttaattaatgatgtatgtggtccatattatgaaccacatacatcatta 1358263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 10008818 - 10008922
Alignment:
Q  87 actccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    ||||||||||||  ||| ||||||||||||||||||||   ||||||||| | ||||||||||||| || ||| |||| ||||||||||||||||| |||    
T  10008818 actccctccgtttctaaatataagtaaaattgattttttaggttcattcatttaatgatgtatgtggttaataatatggattacatacatcattaaataa 10008917  T
Q  184 ttgaa 188  Q
     ||||    
T  10008918 atgaa 10008922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 40907323 - 40907218
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||  |||| |||||  |||||||| ||||||| ||||||||| |||||||||||||||| |||| ||||||  |||||||||||||||||    
T  40907323 tactccctccgtatttaaatataatcaaaattgactttttaggttcattcaactaatgatgtatgtgatccataatatgaaccacatacatcattaatta 40907224  T
Q  183 attgaa 188  Q
    | ||||    
T  40907223 aatgaa 40907218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 34598999 - 34598911
Alignment:
Q  93 tccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    |||||| | ||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||||  |||||||||||||    
T  34598999 tccgttttcaattataagtaaatttgactttttagattcattcaattaatgatgtatatgattcatattatgaaccacatacatcatta 34598911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 48605214 - 48605085
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||   || |||||| ||| |||| ||||||| |||||||||| ||||||||||||||||||||||||| |  ||||||||||||    |    
T  48605214 tactccctccgttccaaaatataagcaaatttgactttttaggttcattcaattaatgatgtatgtgattcatattatggaccacatacatcatt----a 48605119  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  48605118 attgaatgaacctaaaaagtaaaatttgcttata 48605085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 23392540 - 23392667
Alignment:
Q  93 tccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||| ||||||||| |||||||||  ||||  |||||||||| ||||||||||| ||||  ||||||| ||  |||||||||| |||||||    ||    
T  23392540 tccgttactaattataaataaaattgacattttaggttcattcaactaatgatgtatatgatcaatattataaaccacatacatcaataattaa----at 23392635  T
Q  190 gaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||| |||| ||||||| ||||||||||||    
T  23392636 gaatctaaaaagtaaaatttgcttataattaa 23392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 21852433 - 21852531
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| || ||| |||| |||||| |||||||| ||||||| |||||||||| |||||| |||||| ||||||||||| || ||||||||||||||||    
T  21852433 tactccatcggtttttaaatataagcaaaattgactttttaggttcattcaattaatgatatatgtggttcatattatggatcacatacatcattaatt 21852531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 21909837 - 21909971
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| |||||| || | |||||||||| || | ||||||| || ||||||| ||||||||||||| | ||||||||||| ||||||||||    ||||    
T  21909837 tactccatccgtttttgaatataagtaaattttactttttaggtttattcaattaatgatgtatgtggtccatattatgaactacatacatc----atta 21909932  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||| ||||| |||| ||||||| ||||||| ||||    
T  21909933 attgaataaatctaaaaagtaaaatttgcttatatttaa 21909971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 52253682 - 52253553
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||||||| || ||||||  | ||||||||| |||||||| ||||  | |||||||| ||| |||||||||    ||||    
T  52253682 tactccctccgtttttaaatataagtaaattttattttttaaattcattcaattaatgatgcatgtagtccatattataaatcacatacatc----atta 52253587  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| | |||| ||||||| |||||||    
T  52253586 attgaatgaatataaaaagtaaaatttgcttata 52253553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 4523084 - 4523016
Alignment:
Q  84 tttactccctccgttattaattataagtaaaattgatttt-ta-gttcattcaa-taatgatgtatgtg 149  Q
    ||||||| ||||||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  4523084 tttactctctccgtttttaattataagtaaaattgattttctaggttcattcaattaatgatgtatgtg 4523016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 12993523 - 12993618
Alignment:
Q  89 tccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| | || ||||| |||| |||||||||   ||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  12993523 tccctccgttctaaaatataaataaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 12993618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 16427052 - 16426956
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgat-ttttag-ttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| ||||||||| |||||| ||||||||  |||||||| ||||| | |||||||| ||| ||||||||||||||    
T  16427052 tactccctccgtttttaaatataagcaaaattgattttttagattcattcatttaatgatgaatgtggtccatattattaatcacatacatcattaa 16426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 27549077 - 27549170
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||| |||||||||||| ||||||||||||| | |||||||||||  |||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  27549077 ttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 27549170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 34598877 - 34598990
Alignment:
Q  104 ttataagtaaaattgatttttag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaa 201  Q
    ||||||||||| |||  |||||| ||||||||| |||||||||||||| |||||| ||||||| | |||||||    ||||||||||||||||| ||||     
T  34598877 ttataagtaaatttgtcttttagattcattcaaataatgatgtatgtggttcataatatgaatcatatacatc----attaattgaatgaatctaaaaag 34598972  T
Q  202 taaaattcgcttataatt 219  Q
    | |||||  |||||||||    
T  34598973 tcaaatttacttataatt 34598990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 47293289 - 47293345
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||| ||||||||||||| ||||||||||| || |||||||||||||||||    
T  47293289 ttcattcaattaatgatgtatgtggttcatattatggatcacatacatcattaatta 47293345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 4683081 - 4682983
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||| ||| |||| ||||| |||||||||  ||||| ||||||||||| ||||||||||||| |  ||| ||||||  ||||||||||||||||    
T  4683081 tactccctctgtttttaaatataaataaaattgacttttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt 4682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 34038065 - 34037966
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  | || ||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||||  |  ||||||||| ||||||    
T  34038065 ttactccctccgtattaaaatataagtaaaattgactttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcgttaatt 34037966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 40907175 - 40907270
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    ||||| |||||||  ||| |||||| |||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||| || |||||||||||||    
T  40907175 tactctctccgtttctaaatataagaaaaattgactttttacgttcatttaattaatgatgtatgtggttcatattatggatcacatacatcatta 40907270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 4974190 - 4974092
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    |||||||||||||| || | |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| |||| |  |||||||||||||||    
T  4974190 ttactccctccgttttttaatataagcaaaattgactttttagattcattcatttaatgatgtatgtggttcataatatggaccacatacatcattaat 4974092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 12062182 - 12062288
Alignment:
Q  78 ataagatttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatc 174  Q
    |||| ||||| | |||||||| |||| |||||| |||||||| ||||||| |||||||||| |||||| |||||| |||||| |||| |  |||||||||    
T  12062182 ataatatttatttcctccgtttttaaatataaggaaaattgactttttaggttcattcaattaatgatatatgtggttcataatatggaccacatacatc 12062281  T
Q  175 attaatt 181  Q
    |||||||    
T  12062282 attaatt 12062288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 31634536 - 31634398
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt- 181  Q
    |||||| | |||| ||||||||||| ||| |||| ||||||| || ||||||| |||| ||||||||||| ||| |||| |  ||||||||||||||||     
T  31634536 tactccatacgttcttaattataagcaaatttgactttttaggttaattcaattaatgttgtatgtgatttataatatggaccacatacatcattaattg 31634437  T
Q  182 aattgaatgaatcttaaaaataaaattcgcttataatta 220  Q
    ||||||||||| || |||| |  |||| |||||||||||    
T  31634436 aattgaatgaagctaaaaagtctaatttgcttataatta 31634398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 38149509 - 38149412
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| | || |||||| |||||| ||||||  |||||||||| | ||||||||||||| | |||||||| || || ||||||||||||    
T  38149509 ttactccctccgttttaaaatataagcaaaattcattttttaagttcattcatttaatgatgtatgtggtccatattataaactatatacatcattaa 38149412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 7230203 - 7230111
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatca 175  Q
    |||| |||||||| |||| || ||| |||||||||||||  |||||||||||| ||||||||||||| | |||| ||||||  ||||||||||    
T  7230203 tacttcctccgtttttaaatacaagcaaaattgattttttaagttcattcaattaatgatgtatgtggtccataatatgaaccacatacatca 7230111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 17622812 - 17622877
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaa 201  Q
    ||||||||||| | || |||| |||||| ||||| |||||||||||||||||||||| || |||||    
T  17622812 taatgatgtatataatccataatatgaactacatgcatcattaattaattgaatgaacctaaaaaa 17622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 25378401 - 25378272
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| | || |||||| ||| || ||||||   ||||||||||| ||||||||||||| |  ||||||||||  ||||||||||||    |    
T  25378401 tactccctccgttttaaaatataagcaaattttattttttaggttcattcaattaatgatgtatgtggtcaatattatgaaccacatacatcatt----a 25378306  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  25378305 attgaatgaacctaaaaagtaaaatttgcttata 25378272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 42761377 - 42761281
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| | || ||||||||||||| | ||||  |||||||||| | ||||||||||||| |  ||||||||||  ||||||||||||||    
T  42761377 tactccctccgttttaaaatataagtaaaatttactttttaagttcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaa 42761281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 50008892 - 50008988
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| || | |||||||||||||||  |||||  |||||||| | |||||||| | || |||||||||||||| |||||||| |||||    
T  50008892 tactccctccgttttttaatataagtaaaattgacttttttgattcattcatttaatgatgtgtatggttcatattatgaatcacatacattattaa 50008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 1358280 - 1358216
Alignment:
Q  120 tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    ||||| |||||||||| |||||||||||||| |||||| |||| |  ||||||||||||||||||    
T  1358280 tttttggttcattcaactaatgatgtatgtggttcataatatggaccacatacatcattaattaa 1358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 4974042 - 4974137
Alignment:
Q  86 tactccctccgttattaattataagtaaaattg--atttttagttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||| ||| |||  |||||| |||||||  |||||  |||| |||| |||||||||||||| | |||||||||||  ||||||||||||||    
T  4974042 tactccctctgtttttatatataagcaaaattggcattttatgttcgttcattaatgatgtatgtggtccatattatgaaccacatacatcattaa 4974137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 34662401 - 34662497
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| | |||||||||||||||| ||||||||||  ||||||||||||||    
T  34662401 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtgatttatattatgaaccacatacatcattaa 34662497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 37215316 - 37215220
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| || | || ||| |||||||| ||||||| |||||| | | ||||||||||||||| |||||||||||  ||||||||||||||    
T  37215316 tactccctccgttttttaatacaagcaaaattgactttttaggttcatttatttaatgatgtatgtgatccatattatgaaccacatacatcattaa 37215220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 37255270 - 37255141
Alignment:
Q  86 tactccctccgttattaattataagtaaa-attgatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||  ||| |||||| ||| |||  ||||||| |||||||||| ||||||||||||| || ||| |||| |  ||||||||||||||||     
T  37255270 tactccctccgtttctaaatataagcaaatattactttttaggttcattcaattaatgatgtatgtggttaataatatggaccacatacatcattaatt- 37255172  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
       |||||||||| |||| ||||||| |||||||    
T  37255171 ---gaatgaatctaaaaagtaaaatttgcttata 37255141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 42788472 - 42788376
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||| |  |||| |||||| ||||||||||||| || |||||||| | ||||||||||||| |||||| |||| || ||||||||||||||    
T  42788472 tactccctccatatttaaatataagcaaaattgattttttagattcattcatttaatgatgtatgtggttcataatatggatcacatacatcattaa 42788376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 42788377 - 42788458
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||||||||| |||||||||||  |||||||||    ||||| ||||||||||| |||||| || || ||||||| ||||    
T  42788377 taatgatgtatgtgatccatattatgaaccacatacatc----attaaatgaatgaatctaaaaaatcaattttgcttatatttaa 42788458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 46590835 - 46590964
Alignment:
Q  86 tactccctccgttattaattataagtaaaat-tgattttta-gttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||| ||| |||||| ||| | |  |||||| ||| |||||| ||||||||||||||||||||||||| ||  ||||||| |    ||||    
T  46590835 tactccctccgttactaaatataagcaaattatactttttaggttaattcaattaatgatgtatgtgattcatattataaaccacatacaac----atta 46590930  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || ||||||| |||| |||||||    
T  46590931 attgaatgaacctaaaaaatataatttgcttata 46590964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 47991773 - 47991869
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||| ||||||||| ||| |||| |||||| |||||||||  |||||||||||||| | |||| |||  || ||||||||||||||    
T  47991773 tactccctccgttatgaattataagcaaatttgactttttaggttcattcatttaatgatgtatgtggtccataatatagatcacatacatcattaa 47991869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 48605108 - 48605164
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||| ||||||| ||||||||||||||||    
T  48605108 gttcattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaatt 48605164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 1252142 - 1252225
Alignment:
Q  101 taattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| |||||| | ||||||| |||||||||| ||||||||||||| ||||||||||| |  || |||||||||||||    
T  1252142 taattataagcaaaattaactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacgtacatcattaatt 1252225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 6785110 - 6785067
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||||| |||||||||||  ||||||||||||||    
T  6785110 taatgatgtatgtgatacatattatgaaccacatacatcattaa 6785067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 24015057 - 24015100
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| |||||||||||||  ||||||||||||||    
T  24015057 taatgatgtatgtggttcatattatgaaccacatacatcattaa 24015100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 28237201 - 28237110
Alignment:
Q  100 ttaattataagtaaaattgatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| ||| || |||||||| |||||||||| ||||||||||||| | |||| |||||   ||||||||||||||| || |||||    
T  28237201 ttaattataagcaaatttaatttttaggttcattcaattaatgatgtatgtggtccataatatgacccacatacatcattaataaaatgaat 28237110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 34037916 - 34038014
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||  ||||||||  ||||| |||||||||| ||| |||||||||| |  ||| ||||||  ||||||||||||||||    
T  34037916 tactccctccgtttttaaatataaacaaaattgacttttttggttcattcaattaacgatgtatgtggtctataatatgaaccacatacatcattaatt 34038014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 37215182 - 37215273
Alignment:
Q  100 ttaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||| ||||    
T  37215182 ttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtggttcataatatggatcacatacatcattaaataaatgaa 37215273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 47011282 - 47011374
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||| |||||| |||||| | |||||||| ||| |||||||||    |||||||||||||| || |||| ||||||| ||||||| ||||    
T  47011282 gttcattcaattaatgatatatgtggtccatattataaatcacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttatatttaa 47011374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 50998316 - 50998398
Alignment:
Q  102 aattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||| ||| |||||||||   ||||||||||| |||||||||| || ||||||||||| | || ||||||||||||||    
T  50998316 aattataagcaaatttgattttttaggttcattcaattaatgatgtatttggttcatattatggactatatacatcattaatt 50998398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 8751470 - 8751557
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| || || |||| ||  |||||||||||||    |||||||||| || |||||||||||| |||||||    
T  8751470 gttcattcaattaatgatgtatgtggtttatgttataaaccacatacatcatta----attgaatgaacctaaaaaataaaatttgcttata 8751557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 17387660 - 17387742
Alignment:
Q  100 ttaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| ||||||||||||||| ||||||| |||||||| | ||||||||||||| | |||||||| ||  ||||||||||||||    
T  17387660 ttaaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtggtccatattataaaccacatacatcattaa 17387742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 25378295 - 25378382
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |||||| |||  |  |||||||||||||    |||||||||| || |||||||||||| |||||||    
T  25378295 gttcattcaattaatgatgtatgtggttcataatattgaccacatacatcatta----attgaatgaacctaaaaaataaaatttgcttata 25378382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 27146170 - 27146072
Alignment:
Q  84 tttactccctccgttattaattataagtaaaattga-ttttta-gttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||| |||| |||||| |||||||| |||||| |||||||||  |||||||||||||| |  | |||||||   ||||||||||||||    
T  27146170 tttactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggtctacattatgagacacatacatcattaa 27146072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 31909787 - 31909874
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |  ||||||| ||  |||||||||||||    |||||||||| || |||||||||||| |||||||    
T  31909787 gttcattcaattaatgatgtatgtggtctatattataaaccacatacatcatta----attgaatgaacctaaaaaataaaatttgcttata 31909874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 31919985 - 31919888
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||   || |||||| |||||| ||||||   ||||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  31919985 ttactccctccgtttcaaaatataagcaaaatttattttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 31919888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 35049928 - 35050026
Alignment:
Q  86 tactccctccgttattaattataagtaaaatt-gatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||| | ||||||||||||| || || |||||| |||||||||| |||||||||||||||  ||||||| ||| | ||| ||||||||||    
T  35049928 tacttcctccgttttcaattataagtaaattttgacttttaggttcattcaattaatgatgtatgtgatctatattataaatcatatatatcattaatt 35050026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 37255122 - 37255220
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| || | |||||| ||| || | ||||||| |||||||||| ||||||||||||| | |||||||| ||  ||||||||||||||||    
T  37255122 tactccctccgttttttaatataagcaaattttactttttagattcattcaattaatgatgtatgtggtccatattattaaccacatacatcattaatt 37255220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 38824392 - 38824301
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||| ||||||||||||| |  ||||||||||  ||||||||||||    |||||||||||  | |||||||||||| ||||||| ||||    
T  38824392 ttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcatt----aattgaatgaacataaaaaataaaatttgcttatatttaa 38824301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 39015559 - 39015657
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||   ||||||||  ||| |||| ||||||| |||||||||| ||||||||||||| |  ||||||||||  ||||||||||||||||    
T  39015559 tactccctccgttgccaattataaacaaatttgactttttaggttcattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaatt 39015657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 40237679 - 40237590
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacataca 172  Q
    |||||||||| || | || ||||| |||| || ||||||  |||||||||||| ||||||||||||| |||||| |||||| ||||||||    
T  40237679 tactccctcccttttaaaatataaataaattttattttttaagttcattcaattaatgatgtatgtggttcataatatgaactacataca 40237590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 52253577 - 52253668
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||| |||||||||||||||| ||| |||| | ||||| ||||    ||||||||||||||| | ||||||||||||  |||||| ||||    
T  52253577 ttcattcaattaatgatgtatgtgatttataatatggactacatgcatc----attaattgaatgaatttaaaaaataaaatttacttatatttaa 52253668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 4798933 - 4798978
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| | |||||||||||  ||||||||||||||||    
T  4798933 taatgatgtatgtggtccatattatgaaccacatacatcattaatt 4798978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 9135569 - 9135610
Alignment:
Q  138 atgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  9135569 atgatgtatgtggttcatattatgaaccacatacatcattaa 9135610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 12447503 - 12447548
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||| |||| ||||||||||| || ||||||||||||||||    
T  12447503 taatgatgtttgtggttcatattatggatcacatacatcattaatt 12447548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 16426904 - 16427038
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||  ||| |||||| |||||||| ||||||| |||||||| | |||||||||||||||| ||| |||| |  |||| ||||    ||||    
T  16426904 tactccctccgtttctaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtgattaataatatggaccacattcatc----atta 16426999  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    | ||||||||||| |||||| || || ||||||| ||||    
T  16427000 aatgaatgaatctaaaaaatcaattttgcttatatttaa 16427038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 32067560 - 32067660
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| |||||| |||| |||||||||| || |  |||| |||| ||||||| |||||||||| | || |||||||| ||| |||| ||||||||||||    
T  32067560 tactccatccgtttttaaatataagtaaattttaccttttaagtttattcaattaatgatgtatttaatccatattataaatcacatgcatcattaatta 32067659  T
Q  183 a 183  Q
    |    
T  32067660 a 32067660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 38847298 - 38847394
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||| | ||||||  |||||||||| | ||||||||||||| |  ||||||| ||  ||||||||||||||    
T  38847298 tactccctccgtttttaaatataagcaaaaataattttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaa 38847394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 39181153 - 39181064
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcata--ttatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| ||||||   ||||||  |||||||||    ||||||||||||||||| |||| ||||||| |||||||    
T  39181153 gttcattcaattaatgatgtatgtggttcataatatatgaaccacatacatc----attaattgaatgaatctaaaaagtaaaatttgcttata 39181064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 42914585 - 42914638
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| |||| |||||||||||  |||||||||||||| ||| |||||    
T  42914585 taatgatgtatatgatccatattatgaaccacatacatcattaaataaatgaat 42914638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 45011631 - 45011536
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgat--ttttagttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||| ||| |||| ||||| ||||||||||  ||| ||||||||||  |||||||||||||| | |||||||||||  |||||||| |||||    
T  45011631 tactccctctgtttttaaatataaataaaattgattatttaagttcattcatttaatgatgtatgtg-tccatattatgaaccacatacattattaa 45011536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 47293341 - 47293296
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||||    
T  47293341 taatgatgtatgtgatccataatatgaaccacatacatcattaatt 47293296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 2091742 - 2091871
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||| |||||||| | || |||||||||| |||| ||||||| |||||||||| |||||||||| || |  ||| ||||||| |||||||| ||||        
T  2091742 tacttcctccgttttaaaatataagtaaatttgactttttaggttcattcaattaatgatgtatatggtcaataatatgaatcacatacatgatta---- 2091837  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  2091838 attgaatgaacctaaaaagtaaaatttgcttata 2091871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 15285386 - 15285290
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||| ||||||| |||| |||||  |||||||| ||||||| |||||||| | ||||||||||||||| |||||||| ||  |||||||| |||||    
T  15285386 tactcactccgtttttaaatataaacaaaattgactttttaggttcattcatttaatgatgtatgtgatccatattataaaccacatacataattaa 15285290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 15311504 - 15311564
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| |||||||||| | ||||||||||||| | |||||||| || |||||||||||||||    
T  15311504 ttttaagttcattcatttaatgatgtatgtggtccatattataaactacatacatcattaa 15311564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 21852539 - 21852483
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||||| |||| ||||||  ||||| ||||||||||    
T  21852539 gttcattcaattaatgatgtatgtgatccataatatgaaccacatatatcattaatt 21852483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 26040524 - 26040428
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| ||||||||||||||  | |||||||||||  ||||||||||||||    
T  26040524 tactccctccgtttcaaaatataagcaaaattaactttttaggttcattcatataatgatgtatgtagtccatattatgaaccacatacatcattaa 26040428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 27549147 - 27549091
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    
T  27549147 gttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt 27549091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 28237121 - 28237201
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||||||  |||||||||| |  |||||||||    |||||||||||||| | ||||||| ||||| ||||||||||||    
T  28237121 taatgatgtatgtgggtcatattatggaccacatacatc----attaattgaatgaa-cctaaaaattaaatttgcttataattaa 28237201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 34121005 - 34120953
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||||| | |||||||||||  |||||||||||||| ||| ||||    
T  34121005 taatgatgtatgtggtccatattatgaaccacatacatcattaaataaatgaa 34120953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 38824286 - 38824385
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||| |||||| |||| |||||| ||| || ||||||   ||||||||||| ||||||||||||| |||||| |||  |  ||||||||||||||||    
T  38824286 ttactccatccgtttttaaatataagcaaattttattttttatgttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaatt 38824385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 39181088 - 39181176
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatat--tatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||||||||||||| |||||||  ||||||  |||||||||||||    |||||||||| || |||| ||||||| |||||||    
T  39181088 ttcattcaattaatgatgtatgtggttcatatattatgaaccacatacatcatta----attgaatgaacctaaaaagtaaaatttgcttata 39181176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 45239093 - 45239029
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| ||||||||||||| |  ||||||||||  |||||||||||| ||||| |||||    
T  45239093 gttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaat 45239029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 46590941 - 46590885
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||| |||||||| || ||| ||||||| ||||||||||||||||    
T  46590941 gttcattcaattaatgttgtatgtggtttataatatgaatcacatacatcattaatt 46590885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 47912568 - 47912664
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||  ||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| || ||| |||| |  ||||||||||||||    
T  47912568 tactccctccgtttctaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttaataatatggaccacatacatcattaa 47912664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 14064801 - 14064904
Alignment:
Q  81 agatttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatt 177  Q
    |||| ||||||||||||| |||| |||||||||| || | ||||||| |||||||||| ||||||||||||| | |||||||||||| ||||||||||||    
T  14064801 agatatactccctccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcatt 14064900  T
Q  178 aatt 181  Q
    ||||    
T  14064901 aatt 14064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 9985065 - 9984931
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| ||||||  |||||||||||||| ||||||||| || ||||||||| |||||||| ||||| | ||||||| |||  |||||||||||||||||    
T  9985065 tactccatccgtttctaattataagtaaatttgattttttagattcattcaactaatgatgcatgtggtccatattaagaaccacatacatcattaatta 9984966  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |    ||||| || |||||||||||| ||||||||||||    
T  9984965 a----atgaacctaaaaaataaaatttgcttataattaa 9984931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 34186500 - 34186401
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||| |||||| |||||||| ||||||| |||||||||| ||||||||||||| | |||| ||||||  ||||||||||||||||    
T  34186500 ttactccctccgtttttaaatataagcaaaattgagtttttaggttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 34186401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 21916928 - 21917021
Alignment:
Q  91 cctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||||||||||||||||||||||||   ||| |||||| |||| ||||||||||| |||||| | || ||||||||| |||||||    
T  21916928 cctccgttattaattataagtaaaattgattttttaggtttattcaattaattatgtatgtgatccatattcttaactacatacattattaatt 21917021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 14571132 - 14571023
Alignment:
Q  105 tataagtaaaattgatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaat 202  Q
    |||||||||| ||  ||||||| |||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    |||||||||| ||||||    
T  14571132 tataagtaaattttttttttagattcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt----gaatgaatctaaaaaat 14571037  T
Q  203 aaaattcgcttata 216  Q
    |||||| |||||||    
T  14571036 aaaatttgcttata 14571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 37554379 - 37554472
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||| |||||||||||| ||||||||||||| |||||| ||| || ||||||||| ||||    ||||||||||||| |||||||||||| |||||||    
T  37554379 ttttaagttcattcaattaatgatgtatgtggttcataatataaactacatacattatta----attgaatgaatctaaaaaataaaatttgcttata 37554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 13461547 - 13461642
Alignment:
Q  87 actccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||  |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||||||||||  ||||||||||||||    
T  13461547 actccctccgtatttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcatattatgaaccacatacatcattaa 13461642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 38860944 - 38860846
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgat--ttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| |||||||||  |||| |||||||||| |||||||||||||| |  ||| ||||||  ||||||||||||||||    
T  38860944 tactccctccgtttttaaatataagcaaaattgatttttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt 38860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 9005091 - 9004985
Alignment:
Q  86 tactccctccgttattaattataagtaaaatt-gatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||| ||| || || |||||| |||||||||| ||| |||||||||||| |||||||  | ||||||||||||||||||    
T  9005091 tactccctccgtttttaaatataagcaaattttgacttttaggttcattcaattaataatgtatgtgatttatattatagactacatacatcattaatta 9004992  T
Q  183 attgaat 189  Q
    | |||||    
T  9004991 aatgaat 9004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 43585491 - 43585589
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||  ||| || | ||||||| |||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  43585491 tactccctccgtttttaaatataaacaaattttactttttaggttcattcaattaatgatgtatgtggttcatattatgaaccacatacatcattaatt 43585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 43585639 - 43585541
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||| |||| |||||| |||||| | ||||||| |||||||||| ||||||||||||| |||||| ||||||  ||||||||||||||||    
T  43585639 tactccatccgtttttaaatataagcaaaatttactttttaggttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaatt 43585541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 13461695 - 13461598
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| || | |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| ||||||  ||||||||||||||    
T  13461695 ttactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcataatatgaaccacatacatcattaa 13461598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 7276119 - 7276215
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| ||||||||||| ||||||||||||| | ||||||| |||||||| | |||||||| |||| | |||||||||||  ||||||||||||||    
T  7276119 tactccatccgttattaaatataagtaaaattaactttttagcttcattcattgaatgatgtgtgtggtccatattatgaaccacatacatcattaa 7276215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 37685002 - 37685095
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||| |||||||||||| ||||||||||||| |||||| |||  | ||||||||| ||||    ||||||||||||| |||||||||||| |||||||    
T  37685002 ttttaagttcattcaattaatgatgtatgtggttcataatatagactacatacattatta----attgaatgaatctaaaaaataaaatttgcttata 37685095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 42480480 - 42480571
Alignment:
Q  93 tccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||| |||||| |||||| ||||||  | |||||||||| |||||||||||||||||||| ||||||  | ||||||||||||||    
T  42480480 tccgtttttaaatataagcaaaattaattttttaaattcattcaattaatgatgtatgtgattcatagtatgaaccatatacatcattaatt 42480571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 14416497 - 14416421
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||||||| ||| |||| |  ||||||||||||||||    |||||||||| |||||||||||| |||||||    
T  14416497 taatgatgtatgtgatttataatatggaccacatacatcattaatt----gaatgaatctaaaaaataaaatttgcttata 14416421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 27990371 - 27990486
Alignment:
Q  104 ttataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaa 200  Q
    ||||||||||| || ||||||  ||||| |||||| |||||||||| || ||||||||||  ||||||||||||    |||||||||||||| || ||||    
T  27990371 ttataagtaaatttaattttttaagttctttcaattaatgatgtatttggttcatattatagattacatacatc----attaattgaatgaacctaaaaa 27990466  T
Q  201 ataaaattcgcttataatta 220  Q
     | ||||| |||||||||||    
T  27990467 gtgaaatttgcttataatta 27990486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 31787319 - 31787264
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  31787319 ttcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaatt 31787264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 34102071 - 34102169
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| |||||| ||||||   ||||||| ||| ||||||||||||  | |||||||||||  ||||||||||||||||    
T  34102071 tactccctccgtttttaaatataagcaaaatttattttttaggttcattgaattaatgatgtatgtagtccatattatgaaccacatacatcattaatt 34102169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 11784394 - 11784332
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||||||| |||||||||||||||  |||||||||| ||||||||| |||||||    
T  11784394 ttttaagttcattcaattaatgatgtatgtgatgtatattatgaactacatacattattaatt 11784332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 14064954 - 14064856
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||| |||| |||||| |||| | | ||||||| |||||||||| |||||||||||||||||||| |||| |  ||||||||||||||||    
T  14064954 tacttcctccgtttttaaatataagcaaaaattactttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaatt 14064856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 14416445 - 14416507
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||| ||||||||||||| | |||||||| ||| |||||||||||||||||| ||||    
T  14416445 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattaaatgaa 14416507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 14571004 - 14571102
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || |||||| || |||||||||| ||||||||||||| | |||||||||||  ||||||||||||||||    
T  14571004 tactccctccgtttctaaatataagcaaattttattttttagattcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaatt 14571102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 21163674 - 21163576
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||| ||| | || |||||||||| || | ||||||| |||||||||| ||||||||||||| | |||||||| ||| ||||||||||||||||    
T  21163674 tactccctctgttttaaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 21163576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 34186351 - 34186449
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||   || |||||| |||| ||| ||||||| |||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  34186351 tactccctccgtttcaaaatataagcaaaaatgactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 34186449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 40905863 - 40905965
Alignment:
Q  89 tccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaatt 185  Q
    |||||||||  |||| ||||||||||| | | ||||||| |||||||| | ||||||||||||||| ||||||||| || |||||||||||||| ||| |    
T  40905863 tccctccgtatttaaatataagtaaaaattactttttaggttcattcatttaatgatgtatgtgatccatattatggatcacatacatcattaaataaat 40905962  T
Q  186 gaa 188  Q
    |||    
T  40905963 gaa 40905965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 13359156 - 13359253
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| || | |||||| |||||||| ||||||| |||||||| | ||||||||||||| | |||||||||||  |||| |||||||||    
T  13359156 ttactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatgcatcattaa 13359253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 15966644 - 15966737
Alignment:
Q  91 cctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| || |||| ||||||||||||| | ||||||| |||||||||| ||||||||||||| || |||||||| |  ||||||||||||||||    
T  15966644 cctccatttttaaatataagtaaaattaactttttaggttcattcaattaatgatgtatgtggtttatattatggaccacatacatcattaatt 15966737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 15966782 - 15966689
Alignment:
Q  91 cctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||| |||| ||||| ||||||||| ||||||| |||||||||| ||||||||||||| | |||| ||| ||  ||||||||||||||||    
T  15966782 cctccgtttttaaatataaataaaattgactttttaggttcattcaattaatgatgtatgtggtccataatataaaccacatacatcattaatt 15966689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 16056741 - 16056837
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| ||||||||  ||||| ||||||||| | |||||||||| |||| |||||||||||  ||||||||||||||    
T  16056741 tactccctccgtttcaaaatataagcaaaattgacttttttggttcattcatttaatgatgtatatgatccatattatgaaccacatacatcattaa 16056837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 31947446 - 31947551
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||   || || ||||||| |||| ||||||| |||||||||| ||| ||||||||| ||||||||||| || | ||||||||||||||     
T  31947446 tactccctccgtttcaaaatagaagtaaatttgactttttagattcattcaattaattatgtatgtggttcatattatggatcatatacatcattaattg 31947545  T
Q  183 attgaa 188  Q
    ||||||    
T  31947546 attgaa 31947551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 21152690 - 21152634
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||||||| ||| ||||||||||||||||    
T  21152690 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 21152634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 21159825 - 21159769
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||||||| ||| ||||||||||||||||    
T  21159825 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 21159769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 21344593 - 21344497
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| |||| |  ||||||||||||||    
T  21344593 tactccctccgtctttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtggttcataatatggaccacatacatcattaa 21344497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 31787256 - 31787312
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| |||||| |||| || ||||||||||||||||    
T  31787256 gttcattcaattaatgatgtatgtggttcataatatggatcacatacatcattaatt 31787312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 36137117 - 36137061
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||||||||||||| | |||||| | |||||||||||||||||    
T  36137117 gttcattcaattaatgatgtatgtgatttaaattatggactacatacatcattaatt 36137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 37637284 - 37637363
Alignment:
Q  105 tataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| || ||||||  |||||||||||| |||||||||||||| ||||| ||| || ||||||||| |||||||    
T  37637284 tataagtaaattttattttttaagttcattcaattaatgatgtatgtgactcataatataaactacatacattattaatt 37637363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 38860815 - 38860894
Alignment:
Q  105 tataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||||||||||   ||||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||    
T  38860815 tataagcaaaattgattttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaatt 38860894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 4151147 - 4151225
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatg 161  Q
    |||||| |||||| |||| |||||| |||||||| ||||  |||||||||||| ||| ||||||||| |||||||||||    
T  4151147 tactccatccgtttttaaatataagcaaaattgactttttaagttcattcaattaataatgtatgtggttcatattatg 4151225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 7336892 - 7336980
Alignment:
Q  125 agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||||| ||||||||||||| | |||||||| ||  |||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  7336892 agttcattcaattaatgatgtatgtggtccatattataaaccacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 7336980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 13420449 - 13420535
Alignment:
Q  105 tataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||||||||||||||||   ||||||||||| ||| ||||||||||| |||| ||| ||  | |||||||||||||||| ||||    
T  13420449 tataagtaaaattgattttttaggttcattcaattaataatgtatgtgatccataatataaaccatatacatcattaattaaatgaa 13420535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 13420578 - 13420480
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| ||| |||||||||   ||||||| || ||||||||||| || || |||||||| || |||||||| |||||||    
T  13420578 tactccctccgtttttaaatataagcaaatttgattttttaggttcatttaattaatgatgtatatggtttatattatggatcacatacattattaatt 13420480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 24433679 - 24433581
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| ||||||| | || |||||||||| || ||||||   ||||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    
T  24433679 tactcactccgttttaaaatataagtaaattttattttttaggttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt 24433581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 24433584 - 24433652
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    |||||||||||||| | |||||||||||  |||||||||    |||||||||||||| || ||||||||||||    
T  24433584 taatgatgtatgtggtccatattatgaaccacatacatc----attaattgaatgaacctaaaaaataaaatt 24433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 34102176 - 34102121
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| ||||||||||||| |||||| |||| | |||||||||||||||||    
T  34102176 ttcattcaattaatgatgtatgtggttcataatatggactacatacatcattaatt 34102121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 35172426 - 35172493
Alignment:
Q  86 tactccctccgttattaattataagtaaa-attgattttt-agttcattcaa-taatgatgtatgtga 150  Q
    ||||||||||||| ||||||||||| |||  ||||||||| ||||||||||| |||||||||||||||    
T  35172426 tactccctccgtttttaattataagaaaattttgatttttaagttcattcaattaatgatgtatgtga 35172493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 36964245 - 36964324
Alignment:
Q  105 tataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||||  |  |||||||||| |||||    
T  36964245 tataagtaaaattgactttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcactaatt 36964324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 36964374 - 36964276
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||| |||| |||||||||||||||  |||||  ||||||||| || ||||||||||| |  ||| ||||||  ||||||||||||||||    
T  36964374 tactccgtccgtttttaaatataagtaaaattgaattttttgattcattcaattagtgatgtatgtggtctataatatgaaccacatacatcattaatt 36964276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 29112336 - 29112294
Alignment:
Q  179 attaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||||||| || |||||||||||| ||||||||||||    
T  29112336 attaattgaatgaacctaaaaaataaaatttgcttataattaa 29112294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 33545956 - 33545859
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||  |||| |||||| |||||| |||||   |||||||||  | ||||||||||||| |  |||||||||| |||||||||||||||    
T  33545956 ttactccctccgtctttaaatataagcaaaattaattttataagttcattcgtttaatgatgtatgtggtctatattatgaactacatacatcattaa 33545859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 40208509 - 40208571
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||||||| |||||| ||||||||||||||||| ||  ||||| ||||||||||    
T  40208509 ttttaagttcattcaattaatgatatatgtgattcatattataaaccacatatatcattaatt 40208571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 5243430 - 5243373
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    |||||||||| ||| |||||| |||||||| |||||||  ||||||||||||||||||    
T  5243430 ttcattcaattaattatgtatatgattcatcttatgaaccacatacatcattaattaa 5243373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 8694479 - 8694584
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| ||||||  ||| |||||| |||||||| ||||||| |||||||| | ||| ||||||||||| | |||||||||  |||||||||||||| ||    
T  8694479 tactccatccgtttctaaatataagcaaaattgactttttagattcattcatttaataatgtatgtgatccttattatgaaccacatacatcattaaata 8694578  T
Q  183 attgaa 188  Q
    | ||||    
T  8694579 aatgaa 8694584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 42480568 - 42480523
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| || |||||| ||||||| ||||||||||||||||    
T  42480568 taatgatgtatatggttcatactatgaatcacatacatcattaatt 42480523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 5089597 - 5089501
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| |||||||| |||| ||||| |||||||||||||| || || ||||| | ||||||||||||| | |||||||||||  |||| |||||||||    
T  5089597 tacttcctccgtttttaaatataaataaaattgattttttagatttattcatttaatgatgtatgtggtccatattatgaacaacattcatcattaa 5089501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 5226015 - 5226111
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  5226015 tactccctccgtttcaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 5226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 8618393 - 8618489
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  8618393 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 8618489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 12165386 - 12165322
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| |||||||||| ||||| |||||||  |  |||||||||||||||||| |||||    
T  12165386 gttcattcaattaatgatgtatatgatttatattatataccacatacatcattaattaaatgaat 12165322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 21152626 - 21152682
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||||||||||||| ||| |||| |  ||||||||||||||||    
T  21152626 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaatt 21152682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 21159761 - 21159817
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||||||||||||| ||| |||| |  ||||||||||||||||    
T  21159761 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaatt 21159817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 21163568 - 21163624
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||||||||||||| ||| |||| |  ||||||||||||||||    
T  21163568 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaatt 21163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 34147977 - 34148041
Alignment:
Q  125 agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||| |||||| ||| ||||||||| |||  || |||||||||||||||||| ||||    
T  34147977 agttcattcaattaatgatatatttgattcataatatagatcacatacatcattaattaaatgaa 34148041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 36329118 - 36329174
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||| |||||| ||||||||||| |  ||||||||||||||||    
T  36329118 gttcattcaattaatgatatatgtggttcatattatgtaccacatacatcattaatt 36329174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 39916387 - 39916323
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| ||| ||||||||| || ||| |||| ||||||||||||| ||||||| |||||    
T  39916387 gttcattcaattaataatgtatgtggtttataatatggattacatacatcaataattaaatgaat 39916323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 94)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 24529717 - 24529619
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||||||||||||  |||||||||||||||| |||||||||||||| |  ||| ||||||  ||||||||||||||||    
T  24529717 tactccctccgtttttaaatataagtaaaattgacttttttagttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt 24529619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 41789065 - 41788936
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| |||||| | || |||||||||| |||||||||  |||| ||||||| ||||||||||||| ||||||||||| |  ||||||||||||    |    
T  41789065 tactccttccgttctaaaatataagtaaatttgattttttaagtttattcaattaatgatgtatgtggttcatattatggaccacatacatcatt----a 41788970  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||||||||||| |||||||    
T  41788969 attgaatgaacctaaaaaataaaatttgcttata 41788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 18592341 - 18592437
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||||| |||||||||||  ||||||||||||||    
T  18592341 tactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtgatccatattatgaaccacatacatcattaa 18592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 24156133 - 24156229
Alignment:
Q  84 tttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatt 177  Q
    ||||||||||||||| |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||||||| || ||||||||||||    
T  24156133 tttactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcatattatggatcacatacatcatt 24156229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 50038594 - 50038465
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| |||||| |||| |||||||||| || | ||||||| |||||||||| |||||||||||| || |||||||||||  ||||||||||||    |    
T  50038594 tactccttccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcatt----a 50038499  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||| |||| ||||||| |||||||    
T  50038498 attgaatgaatctaaaaagtaaaatttgcttata 50038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 50045816 - 50045687
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| |||||| |||| |||||||||| || | ||||||| |||||||||| |||||||||||| || |||||||||||  ||||||||||||    |    
T  50045816 tactccttccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcatt----a 50045721  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||| |||| ||||||| |||||||    
T  50045720 attgaatgaatctaaaaagtaaaatttgcttata 50045687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 38616554 - 38616458
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| |||| ||| |||| |||||||||||||||  ||||||||||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  38616554 tacttcctctgtttttaaatataagtaaaattgacttttttagttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 38616458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 44639890 - 44639756
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| ||||||||||| |  ||||||||||||    |    
T  44639890 tactccctccgttcttaaatataagcaaatttcactttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcatt----a 44639795  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||| || |||| ||||||| ||||||| ||||    
T  44639794 attgaatgaacctaaaaagtaaaatttgcttatatttaa 44639756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 43635875 - 43635930
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  43635875 ttcattcaattaatgatgtatgtggttcatattatgaactacatacatcattaatt 43635930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 4711402 - 4711507
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||  |||||||||  |||||||||||||   ||||||||||| |||||| |||||| ||||||||||| |  |||||| ||||||||||    
T  4711402 tactccctccgtttctaattataaacaaaattgattttttatgttcattcaattaatgatttatgtggttcatattatggaccacatacttcattaatta 4711501  T
Q  183 attgaa 188  Q
    | ||||    
T  4711502 aatgaa 4711507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 23795723 - 23795626
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag--ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||||||  |||||||  |||||||| | |||||||||||||||| ||||||||||| ||||| ||||||||    
T  23795723 tactccctccgtttttaaatataagcaaaattggctttttaggtttcattcatttaatgatgtatgtgatttatattatgaatcacatatatcattaa 23795626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 46779345 - 46779424
Alignment:
Q  138 atgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||||| || ||||||||||  |||||||||||||||||    ||||||||| |||||||||||| ||||||| ||||    
T  46779345 atgatgtatgtggtttatattatgaaccacatacatcattaatta----aatgaatctaaaaaataaaatttgcttatatttaa 46779424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 50038446 - 50038544
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| |||||| |||| |||||||||||||||||||    
T  50038446 tactccctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaatt 50038544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 50045668 - 50045766
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| |||||| |||| |||||||||||||||||||    
T  50045668 tactccctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaatt 50045766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 53402995 - 53403093
Alignment:
Q  94 ccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||| |||| |||||| |||||||| |||||| ||||||||||| ||||||||||||| || |||||||| || || ||||||||||||||| |||||    
T  53402995 ccgtttttaaatataagcaaaattgactttttatgttcattcaattaatgatgtatgtggtttatattatggatcacgtacatcattaattaaatgaat 53403093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 33084860 - 33084763
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||||||  ||| |||||||||||||||||||| | ||||||||| ||||||| ||| || ||||||||||| |  ||||||||||||||||    
T  33084860 tactccatccgtttctaaatataagtaaaattgatttttaaattcattcaattaatgatatatctggttcatattatggaccacatacatcattaatt 33084763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 45890971 - 45891023
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||| ||||    
T  45890971 taatgatgtatgtgattcatattacgaaccacatacatcattaattaaatgaa 45891023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 46996523 - 46996575
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||| ||||    
T  46996523 taatgatgtatgtggttcatattatgaactacataaatcattaattaaatgaa 46996575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 24331516 - 24331440
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||||||| |||||| |||  ||||||||||| |||||||    |||||||||| |||||||||||| |||||||    
T  24331516 taatgatgtatgtggttcataatatagattacatacattattaatt----gaatgaatctaaaaaataaaatttgcttata 24331440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 24529588 - 24529667
Alignment:
Q  105 tataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||    
T  24529588 tataagtaaaattgactttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaatt 24529667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 54675419 - 54675316
Alignment:
Q  80 aagatttactccctccgttattaattataagtaaaattga-tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatt 177  Q
    |||| ||||||| ||||||  ||| |||||| |||||||| ||||||||||||||||| ||| || ||||||||||||| ||| ||  |||||||| |||    
T  54675419 aagacttactccttccgtttctaaatataagcaaaattgactttttagttcattcaattaataatatatgtgattcataatataaaccacatacattatt 54675320  T
Q  178 aatt 181  Q
    ||||    
T  54675319 aatt 54675316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 9968297 - 9968395
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||||||| || | ||||||| |||||||||| ||||||||||||| || ||| |||| |  ||||||||||||||||    
T  9968297 tactccctccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtggttaataatatggaccacatacatcattaatt 9968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 16392083 - 16391948
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| ||| |||||||||| ||||||| |||| ||||||| || ||| ||| |||| |||||||||||||||||| | || ||||| |||    ||||    
T  16392083 tactccttcctttattaattagaagtaaatttgactttttaggtttatttaattaatgttgtatgtgattcatattacggatcacatatatc----atta 16391988  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaat 222  Q
    |||||||||| || |||||| ||||| | |||||||||||    
T  16391987 attgaatgaacctaaaaaattaaatttgtttataattaat 16391948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 25250912 - 25250874
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt 124  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  25250912 tactccctccgtttttaattataagtaaaattgattttt 25250874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 32112422 - 32112360
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||||||| ||||||||||||| | |||||||||||  ||||||||||||||||    
T  32112422 ttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaatt 32112360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 35003106 - 35003212
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||  ||| ||||| ||||||||| ||||||| |||||||| | |||||||||||||||| ||| ||||||  |||||||| ||||| ||    
T  35003106 tactccctccgtttctaaatataaataaaattgactttttaggttcattcatttaatgatgtatgtgatttataatatgaacgacatacataattaaata 35003205  T
Q  183 attgaat 189  Q
    | |||||    
T  35003206 aatgaat 35003212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 43965110 - 43965001
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| | |||| |||||||||||||   ||||||| ||| ||| ||| ||||| |  ||| ||||||  |||||||||||||||||    
T  43965110 tactccctccgtttttaaatgtaagcaaaattgattttttttgttcatttaattaataatgcatgtggtctataatatgaaccacatacatcattaatta 43965011  T
Q  183 attgaatgaa 192  Q
    ||||||||||    
T  43965010 attgaatgaa 43965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 2994865 - 2994769
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| ||||||   ||||||||| | ||||||||||||| | ||||||||||| |||||||||||||||    
T  2994865 tactccctccgtttcaaaatataagcaaaattcattttttaggttcattcatttaatgatgtatgtggtccatattatgaactacatacatcattaa 2994769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 11583746 - 11583832
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||||||||||||| | |||| |||||| ||||||||||    ||||||||||||||||| |||| | ||||| |||||||    
T  11583746 ttcattcaattaatgatgtatgtggtccataatatgaactacatacatc----attaattgaatgaatctaaaaagtcaaatttgcttata 11583832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 23795574 - 23795670
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||| ||  |||| |||||| |||||||||||||   ||||||||| | |||||| ||||||||||||| ||| ||| ||||||||||||||    
T  23795574 tactccctctgtctttaaatataagcaaaattgattttttaggttcattcatttaatgatatatgtgattcataatataaatcacatacatcattaa 23795670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 29978593 - 29978507
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    ||||||| ||||||| ||||||| |||||||    
T  29978593 ttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt----gaatgaaccttaaaagtaaaatttgcttata 29978507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 34709719 - 34709585
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| || | |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| |||| |  ||||||||||    |||    
T  34709719 tactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcataatatggaccacatacatca----tta 34709624  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    | ||||||||||| |||| |||| || ||||||| ||||    
T  34709623 aatgaatgaatctaaaaagtaaattttgcttatatttaa 34709585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 35967525 - 35967429
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaataa-tgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||  ||| |||||| |||||||| ||||  |||||||||| ||| ||||||||||| | |||||||| ||  ||||||||||||||    
T  35967525 tactccctccgtttctaaatataagcaaaattgactttttaagttcattcattaaatgatgtatgtggtccatattattaaccacatacatcattaa 35967429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 37381195 - 37381114
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaa-taatgatgtatgtgattcatattatgaat 164  Q
    |||||||||||||||||||||||| |||| |||| ||||||| ||| ||||| ||||||| |||||| || |||||||||||    
T  37381195 tactccctccgttattaattataaataaatttgactttttagattcgttcaattaatgatatatgtggtttatattatgaat 37381114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 37432021 - 37431960
Alignment:
Q  99 attaattataagtaaaattga-tttttag-ttcattcaa-taatgatgtatgtgattcatat 157  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||    
T  37432021 attaattataagtaaaattgactttttagattcattcaactaatgatgtacgtgattcatat 37431960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 53410984 - 53411060
Alignment:
Q  106 ataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||| |||||||||||||  |||||||||| | ||||| ||||||||| |||||||||||| | ||||||||||||    
T  53410984 ataagcaaaattgatttttttagttcattcatttaatgacgtatgtgatccatattatgaatcatatacatcattaa 53411060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 53508603 - 53508546
Alignment:
Q  125 agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  53508603 agttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 53508546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 53551632 - 53551689
Alignment:
Q  125 agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  53551632 agttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 53551689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 86199 - 86282
Alignment:
Q  101 taattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| |||||||| ||||  |||||||||||| |||| || || || ||||||||||| || ||||||||||||||||    
T  86199 taattataagcaaaattgactttttgagttcattcaattaatggtgcatttggttcatattatggatcacatacatcattaatt 86282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 4711551 - 4711452
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| ||||||||  ||||||||||||||| ||||||||  |||||||| || |||||| ||||||| | |||| ||||||  ||||| ||||||||||    
T  4711551 ttacttcctccgtttctaattataagtaaaaatgattttttaagttcatttaattaatgaagtatgtggtccataatatgaaccacataaatcattaatt 4711452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 20787700 - 20787604
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  || | ||||||||||||||| ||||||| |||||||| | ||||||||||||| || ||| ||||||  ||||||||||||||    
T  20787700 tactccctccgtattttaatataagtaaaattgactttttagattcattcatttaatgatgtatgtggtttataatatgaacaacatacatcattaa 20787604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 29978530 - 29978586
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||||||||||  ||||||||||||||||    
T  29978530 gttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaatt 29978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 30162737 - 30162657
Alignment:
Q  104 ttataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||| ||||||| |||||||||| |||||| |||||| ||||||||||| |  ||||||||||||||||    
T  30162737 ttataagtaaatttgactttttaggttcattcaattaatgatatatgtggttcatattatggaccacatacatcattaatt 30162657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 34709571 - 34709667
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  34709571 tactccctccgtatttaaatataagcaaaatttactttttagattcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 34709667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 35003254 - 35003158
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||| || |||| |||||||||||||||||||| || |||||| | | ||| ||||||||  |||||||||| ||| ||||||||||||||    
T  35003254 tactccctccatttttaagtataagtaaaattgattttttagattcatttatttaattatgtatgtcgttcatattataaatcacatacatcattaa 35003158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 39923816 - 39923912
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| |||||| || | |||||| |||| ||| ||||||| |||||||| | ||||||||||||||| |||||||||||  ||||||||||||||    
T  39923816 tactccttccgttttttaatataaggaaaaatgactttttaggttcattcatttaatgatgtatgtgatccatattatgaaccacatacatcattaa 39923912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 44551339 - 44551244
Alignment:
Q  89 tccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||  |||||||||| |||||||| ||||  |||| ||||||| |||||||||| ||||| |||||||| |  | ||||||||||||||    
T  44551339 tccctccgtttctaattataagcaaaattgactttttaagtttattcaattaatgatgtatatgatttatattatggaccatatacatcattaatt 44551244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 45070883 - 45070935
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||||||||| |||||||||||| |  |||||||||||||||||| ||||    
T  45070883 taatgatgtatgttattcatattatggaccacatacatcattaattaaatgaa 45070935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 51394094 - 51394190
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| |||||||| |||| ||||||||||||||| ||||||  |||||||| | |||||| |||||| | |||||||| ||| ||||||||||||||    
T  51394094 tacttcctccgtttttaaatataagtaaaattgactttttatattcattcatttaatgatatatgtggtccatattattaatcacatacatcattaa 51394190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 9803063 - 9802954
Alignment:
Q  81 agatttactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatt 177  Q
    |||| |||| |||||||| |||| ||||| ||||||||||||||  |||| ||| ||| ||||||||||||  |||||||||||||  || ||||| |||    
T  9803063 agatatacttcctccgtt-ttaaatataaataaaattgattttttaagtttatttaattaatgatgtatgtagttcatattatgaaacacgtacattatt 9802965  T
Q  178 aattaattgaa 188  Q
    |||||| ||||    
T  9802964 aattaaatgaa 9802954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 12721748 - 12721660
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatat-tatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| ||||||| ||||||  ||||||||||||||||    ||||||| || |||| ||||||| |||||||    
T  12721748 gttcattcaattaatgatgtatgtggttcatatatatgaaccacatacatcattaatt----gaatgaacctaaaaagtaaaatttgcttata 12721660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 12721683 - 12721771
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatat-tatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| ||||||| ||||||  |||||||||||||    |||||||||| || |||| ||||||| |||||||    
T  12721683 gttcattcaattaatgatgtatgtggttcatatatatgaaccacatacatcatta----attgaatgaacctaaaaagtaaaatttgcttata 12721771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 19754254 - 19754309
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| |||||| |||||| | ||||||||||| |||||||||||||||||    
T  19754254 ttcattcaattaatgatatatgtggtccatattatgaactacatacatcattaatt 19754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 19785552 - 19785497
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| |||||| |||||| | ||||||||||| |||||||||||||||||    
T  19785552 ttcattcaattaatgatatatgtggtccatattatgaactacatacatcattaatt 19785497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 44639784 - 44639876
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||| ||||||||||||| | |||| ||||||  |||||||||    ||||||||||||||||| |||| | ||||| ||||||| ||||    
T  44639784 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatc----attaattgaatgaatctaaaaagtgaaatttgcttatatttaa 44639876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 45070925 - 45070878
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||||    
T  45070925 taatgatgtatgtggtccataatatgaataacatacatcattaattaa 45070878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 53684876 - 53684833
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||||| |||||||||||  ||||||||||||||    
T  53684876 taatgatgtatgtgatccatattatgaaccacatacatcattaa 53684833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 55501240 - 55501332
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||| ||||||||||||| || ||||||||||  ||||||| |    |||||||||||||| || |||| ||||||| ||||||| ||||    
T  55501240 gttcattcaattaatgatgtatgtggtttatattatgaaccacatacacc----attaattgaatgaacctaaaaagtaaaatttgcttatatttaa 55501332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 55616825 - 55616907
Alignment:
Q  100 ttaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| ||| ||||||||||||||||   ||||||||| | ||||||||||||| |||||||||||||  |||||||| |||||    
T  55616825 ttaaatattagtaaaattgatttttcaggttcattcatttaatgatgtatgtggttcatattatgaaccacatacattattaa 55616907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 55624129 - 55624211
Alignment:
Q  100 ttaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||| ||| ||||||||||||||||   ||||||||| | ||||||||||||| |||||||||||||  |||||||| |||||    
T  55624129 ttaaatattagtaaaattgatttttcaggttcattcatttaatgatgtatgtggttcatattatgaaccacatacattattaa 55624211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 13743960 - 13743873
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| || ||| |||| |  |||||||||||||||||    ||||||||| |||| ||||||| |||||||    
T  13743960 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaatta----aatgaatctaaaaagtaaaatttgcttata 13743873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 16391576 - 16391441
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||| ||| |||||||||| ||||||| |||| ||||||| || ||| ||| |||| ||||||||||||||||||   |  |||| ||||    ||||    
T  16391576 tactccttcctttattaattagaagtaaatttgactttttaggtttatttaattaatgttgtatgtgattcatattacagaccacatgcatc----atta 16391481  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaat 222  Q
    ||||||||||||| |||||| ||||| | |||||||||||    
T  16391480 attgaatgaatctaaaaaattaaatttgtttataattaat 16391441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 16391818 - 16391720
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||| |||||||||||||||||| |||| |||||| ||| |||||| ||||| |||||||| ||||||||| | |  ||||||||| ||||||    
T  16391818 tactccttcctttattaattataagtaaatttgactttttaggtttattcaattaatgttgtatgtggttcatattacggaccacatacatcgttaatt 16391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 16450297 - 16450203
Alignment:
Q  92 ctccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    |||||||  ||||||| |||||| |||| |||||| ||||||||||| |||||| |||||| || |||||||| || |||| |||||||||||||    
T  16450297 ctccgtttctaattattagtaaatttgactttttatgttcattcaattaatgatatatgtggtttatattatggatcacatgcatcattaattaa 16450203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 17659503 - 17659590
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||| ||||  ||||| |||||||    ||||||||||||| |||| ||||||| |||||||    
T  17659503 gttcattcaattaatgatgtatgtggtccatattttgaaccacatatatcatta----attgaatgaatctaaaaagtaaaatttgcttata 17659590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 25856112 - 25856025
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |  ||||||||||  |||||||||||| ||||    ||||||||| |||| ||||||| |||||||    
T  25856112 gttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattgatta----aatgaatctaaaaagtaaaatttgcttata 25856025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 26206589 - 26206695
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| |||||||| |||| |||||||||| || | ||||||| || ||||||| |||||| |||||| |||||| |||| |  ||||||||||||||||    
T  26206589 ttacttcctccgtttttaaatataagtaaattttactttttagatttattcaattaatgatatatgtggttcataatatggaccacatacatcattaatt 26206688  T
Q  182 aattgaa 188  Q
    || ||||    
T  26206689 aaatgaa 26206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 30051381 - 30051468
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||| ||| | |||||||||||  |||||||||    |||||||||| |||||| |||| ||||||| |||||||    
T  30051381 gttcattcaattaatgatgtacgtggtccatattatgaaccacatacatc----attaattgaacgaatctaaaaagtaaaatttgcttata 30051468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 39294169 - 39294267
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| || |||| ||||| |||| |||| ||||||| |||||||||| |||||| |||||| | |||| |||||| | |||||||||||||||    
T  39294169 tactccctccctttttaaatataaataaatttgactttttaggttcattcaattaatgatatatgtggtccataatatgaactgcatacatcattaatt 39294267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 46779438 - 46779322
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||| ||| || |||||| || |||||| ||| ||||||||||||| |||||| ||| ||  |||||||||| | ||||    
T  46779438 tactccctccgtttttaaatataagcaaattttattttttagattcatttaattaatgatgtatgtggttcataatataaaccacatacatca-tcatta 46779340  T
Q  183 attgaatgaatcttaaaaa 201  Q
    |||||||||| ||||||||    
T  46779339 attgaatgaa-cttaaaaa 46779322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 52256780 - 52256867
Alignment:
Q  126 gttcattcaataat-gatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| || |||||||||| || ||| ||||||| ||||||||||||||||||    || || || |||||||||||| |||||||    
T  52256780 gttcattcaattattgatgtatgtggtttataatatgaatcacatacatcattaattaa----ataaacctaaaaaataaaatttgcttata 52256867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 54569494 - 54569405
Alignment:
Q  92 ctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    |||||||  ||| |||||| |||||| ||||||   ||||||||||| ||||||||||||| ||||||||||| | ||||| ||||||||    
T  54569494 ctccgtttctaaatataagcaaaattaattttttaggttcattcaattaatgatgtatgtggttcatattatggactacatgcatcatta 54569405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 54675275 - 54675364
Alignment:
Q  95 cgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||| ||||||||||||||||||||    ||||||||| |||| ||||||||| || ||||||||||| ||||| || |||||||    
T  54675275 cgtttttaaatataagtaaaattgattttttatcttcattcaattaataatgtatgtggtttatattatgaatcacatatattattaatt 54675364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 9011890 - 9011793
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| | || |||||| |||||| | ||||||| |||||||| | ||||||||||||| |  ||||||||||  ||||||||||||||    
T  9011890 ttactccctccgttttaaaatataagcaaaattcactttttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaa 9011793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 9802930 - 9803011
Alignment:
Q  105 tataagtaaaattgatttt-tag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    ||||||||||||| ||||| ||| |||||| ||| ||| ||||| ||| |||||| |||||| |||||||||||||||||||    
T  9802930 tataagtaaaattaattttgtaggttcatttaattaataatgtacgtgtttcataatatgaactacatacatcattaattaa 9803011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 36470015 - 36469919
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||| |  ||| |||||| |||||||| ||||  |||||||||| | ||||||||||||| |  ||||||||||  ||||||||||||||    
T  36470015 tactccctccgattctaaatataagcaaaattgactttttgagttcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaa 36469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 40545439 - 40545344
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| ||||||| ||||||||||||   |||||||||  ||||||| |||||| | |||||||||||  | ||||||||||||    
T  40545439 tactccctccgtttttaaatataagt-aaattgattttttaggttcattcacttaatgatatatgtggtccatattatgaaccaaatacatcattaa 40545344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 45861000 - 45861097
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||   || |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  45861000 ttactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 45861097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 45891013 - 45890968
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| ||| || ||||||| ||||||||||||||||    
T  45891013 taatgatgtatgtggttcgtaatatgaatcacatacatcattaatt 45890968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 48472750 - 48472822
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattca-ataatgatgtatgtgattcat 155  Q
    |||| |||||||| |||| |||||||||||||||  |||| ||||||||||  |||||||||||||| |||||    
T  48472750 tacttcctccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtatgtggttcat 48472822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 52256833 - 52256788
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||    
T  52256833 taatgatgtatgtgattcatattataaaccacatacatcaataatt 52256788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 55131532 - 55131666
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||  ||| ||||||||||  ||| |||| ||||||| |||||||||| ||||||||||||  || |||||||| |  ||||||||    |||||    
T  55131532 tactccctttgtttttaattataaacaaatttgactttttaggttcattcaattaatgatgtatgttgtttatattatggagcacatacat----aatta 55131627  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||| || |||| | ||||| ||||||||||||    
T  55131628 attgaatgaacctaaaaagttaaatttgcttataattaa 55131666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 5048526 - 5048445
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||| |||| | |||||||| || |||||| |||||||||||    ||||||||| |||||||||||| | ||||| ||||    
T  5048526 taatgatgtgtgtggtccatattataaactacatatatcattaatta----aatgaatctaaaaaataaaatttgtttatatttaa 5048445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 8014179 - 8014275
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| |||| |  |||| |||||||||    
T  8014179 tactccctccgtatttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcataatatggaccacatgcatcattaa 8014275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 15133865 - 15133959
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcat---taattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| |||||||||||||| ||||| |||| |  ||||||| |||   | ||||||||||||||| | |||| ||||||| |||||||    
T  15133865 gttcattcaattaatgatgtatgtgagtcataatatggaccacatacaccatacatcattaattgaatgaatttaaaaagtaaaatttgcttata 15133959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 17028335 - 17028279
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||||||| || |||||| ||||||||||    
T  17028335 gttcattcaattaatgatgtatgtggtccatattataaactacatatatcattaatt 17028279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 18592489 - 18592393
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||  ||| | |||| |||||| | ||||||| |||||||| | ||||||||||||| |||||| |||| || ||||||||||||||    
T  18592489 tactccctccgtttctaaatctaagcaaaattcactttttaggttcattcatttaatgatgtatgtggttcataatatggatcacatacatcattaa 18592393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 26677053 - 26677013
Alignment:
Q  141 atgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||| | |||||| ||||||||||||||||||||||||    
T  26677053 atgtatgcggttcatagtatgaattacatacatcattaatt 26677013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 31914472 - 31914392
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattca-ataatgatgtatgtgattcatattatgaa 163  Q
    |||||||||||||  ||| ||||||||||||||| ||||||| |||||| |  |||||||||||||| | |||||||||||    
T  31914472 tactccctccgtttctaaatataagtaaaattgactttttagattcatttatttaatgatgtatgtggtacatattatgaa 31914392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 32112352 - 32112408
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    
T  32112352 gttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt 32112408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 34166108 - 34166184
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaa-taatgatgtatgtgattcatatta 159  Q
    |||||||||||||  ||| |||||| |||||||| |||||| |||||||||| |||||||||||||| | |||||||    
T  34166108 tactccctccgtttctaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtggtccatatta 34166184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 35207435 - 35207531
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| | ||||||||||||| |||||||||||| | ||||||||| ||||    
T  35207435 tactccctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtggttcatattatgagtcacatacatccttaa 35207531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 41788959 - 41789015
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||| ||||||  ||||||||||||||||    
T  41788959 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 41789015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 56420427 - 56420556
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||  ||| || | ||||||| |||| ||||| ||||||||||||| ||||||  ||| | ||||||||||    ||||    
T  56420427 tactccctccgtttttaaatataaacaaattttactttttaggttcactcaattaatgatgtatgtggttcataacatggactacatacatc----atta 56420522  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  56420523 attgaatgaacctaaaaagtaaaatttgcttata 56420556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 5301911 - 5302025
Alignment:
Q  84 tttactccctccgttattaattataagtaaaatt-gatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    ||||||||||||||| |||| |||||||||| || ||||||||| |||||||||| ||| || |||||| |  ||||||| ||| ||||| |||||||||    
T  5301911 tttactccctccgtttttaaatataagtaaattttgatttttaggttcattcaattaataatatatgtggtctatattataaatcacatatatcattaat 5302010  T
Q  181 taattgaatgaatct 195  Q
    |||||||||||||||    
T  5302011 taattgaatgaatct 5302025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 3212243 - 3212335
Alignment:
Q  92 ctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||| |||| ||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||| |  ||||||||||||||||    
T  3212243 ctccgtttttaaatataagtaaaattgaatttttaggttcattcaattaatgatgtatgtgatttatattatggaccacatacatcattaatt 3212335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 15467571 - 15467703
Alignment:
Q  88 ctccctccgttattaattataagtaaaattga-tttttag-ttcattcaataat-gatgtatgtgattcatattatgaattacatacatcattaattaat 184  Q
    ||||||| |||| |||||||||||||| |||| ||||||| |||||| ||| || ||||||||||||  ||||||| ||| |||||||||    ||||||    
T  15467571 ctccctctgttactaattataagtaaatttgactttttagattcatttaattattgatgtatgtgatctatattataaatcacatacatc----attaat 15467666  T
Q  185 tgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||| ||||||||| ||  |||||||||||    
T  15467667 tgaatgaatctgaaaaataaattttacttataattaa 15467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 31577541 - 31577454
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||  |||||| |||| |||||||||||    |||||||||||||||||| |||||||||||| |||||||    
T  31577541 gttcattcaattaatgatgtatgtagttcataatatggattacatacat----aattaattgaatgaatctaaaaaataaaatttgcttata 31577454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 9908280 - 9908151
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||   || |||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||| |  |||||||||    |||     
T  9908280 tactccctccgttccaaaatataagtaaatttgactttttaggttcattcaattaatgatgtatgtgattcatattatggaccacatacatc----attg 9908185  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  9908184 attgaatgaacctaaaaagtaaaatttgcttata 9908151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 15467711 - 15467611
Alignment:
Q  92 ctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||| |||||||||||||||||| |||||| || |||||||||| |||||||||||||||| ||| |||  || |||||||||| ||||||| ||||    
T  15467711 ctccgtttttaattataagtaaaatttatttttcagattcattcaattaatgatgtatgtgatttataatatagatcacatacatcaataattaaatgaa 15467612  T
Q  189 t 189  Q
    |    
T  15467611 t 15467611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 21478698 - 21478599
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||| ||||| |||||||||  ||||| |||||||||| |||||||||||||| |  ||| ||||||  ||||||||||||||||    
T  21478698 ttactccctccgtttttaaatataaataaaattgatgtttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt 21478599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 667724 - 667822
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcatt-caataatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| |||||||||||||   ||||||| || |||||||||||||  ||||||||||| |  ||||||||||||||||    
T  667724 tactccctccgtttttaaatataagcaaaattgattttttaggttcattccattaatgatgtatgtagttcatattatggaccacatacatcattaatt 667822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 3418901 - 3418802
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||||||| |||| |||||| |||||||| ||||||| |||||||||| ||| ||||||||| |||||||||||||  | ||||||||||||||    
T  3418901 ttactcactccgtttttaaatataagcaaaattgactttttaggttcattcaattaataatgtatgtggttcatattatgaaccatatacatcattaatt 3418802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 5433476 - 5433377
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-ttttta-gttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| ||||||||||| ||| |||| |||||| |||||||||| |||||||||||| | |||||||| || |  ||||||||||||||||    
T  5433476 ttactccctccgtttttaattataagcaaatttgactttttatgttcattcaattaatgatgtatgcggttcatattgtggaccacatacatcattaatt 5433377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 3343921 - 3343823
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaataat-gatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||||||  ||| ||||||||||||||| ||||||| |||||||||| || |||||||||| ||||||||||| |  ||||||||||||||||    
T  3343921 tactccatccgtttctaaatataagtaaaattgactttttaggttcattcaattattgatgtatgtggttcatattatggaccacatacatcattaatt 3343823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 13853039 - 13853108
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga--tttttagttcattcaa-taatgatgtatgtgat 151  Q
    ||||||||||||||| |||||||||| ||||||||  |||| ||||||||||| ||||||||||||||||    
T  13853039 ttactccctccgttactaattataagaaaaattgactttttaagttcattcaattaatgatgtatgtgat 13853108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 29938345 - 29938442
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||| |||| |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| | |||| |||||| |||||||||||||||    
T  29938345 ttactcccttcgtttttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtggtccataatatgaactacatacatcattaa 29938442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 3343773 - 3343871
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| |||| ||||||||   |||||||||| |||||||||||||| | |||| ||||||  |||||||||| |||||    
T  3343773 tactccctccgtttttaaatataagcaaaaatgattttttaggttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcaataatt 3343871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 29318193 - 29318096
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||| ||||||  ||| || |||||||||||||||||   ||||||||||| ||| ||||||||| ||||||||||| |  ||||||||||||||    
T  29318193 ttactccttccgtttctaaatagaagtaaaattgattttttaggttcattcaattaataatgtatgtggttcatattatggaccacatacatcattaa 29318096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 32786154 - 32786241
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| ||||||||||| |  |||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  32786154 gttcattcaattaatgatgtatgtggttcatattatggaccacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 32786241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 25363733 - 25363829
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| |||||| |||| |||||| |||||||||||||   ||||||||| ||||| ||||||||| |||| | |||| || ||||||||||||||    
T  25363733 tactccttccgtttttaaatataagcaaaattgattttttaggttcattcacataattatgtatgtggttcacaatatggatcacatacatcattaa 25363829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 31577478 - 31577564
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||| |||||||| || ||||||||||| ||||||||||    |||||||||||||| || ||||||||| || |||||||    
T  31577478 ttcattcaattaattatgtatgtaatccatattatgaactacatacatc----attaattgaatgaacctaaaaaataaattttgcttata 31577564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 32364012 - 32364108
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||  |||||||| ||||  | |||||||| | ||||||||||||| ||||||||||||| ||||| ||| |||||    
T  32364012 tactccctccgtttttaaatataaacaaaattgactttttaaattcattcatttaatgatgtatgtggttcatattatgaactacattcattattaa 32364108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 3418751 - 3418850
Alignment:
Q  84 tttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    |||||||||||| || | ||| |||||||||||||| ||||||| |||||||||| |||||||||| || |||||| ||||||  |||||||| ||||||    
T  3418751 tttactccctcctttctaaat-ataagtaaaattgactttttaggttcattcaattaatgatgtatatggttcataatatgaaccacatacattattaat 3418849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 9908174 - 9908230
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||| ||||||| ||||||||||||||||    
T  9908174 gttcattcaatcaatgatgtatgtggtccataatatgaatcacatacatcattaatt 9908230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 31759469 - 31759370
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||| ||||||  ||| |||||| |||||||| ||||  |||||||||||| ||||||||||||| | |||| ||||||   |||||||||||||||    
T  31759469 ttactccatccgtttctaaatataagcaaaattgactttttaagttcattcaattaatgatgtatgtggtccataatatgaaccgcatacatcattaatt 31759370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 667830 - 667775
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    ||||||||||| ||||||||||||| | |||| |||||| ||||||||||||||||    
T  667830 gttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaat 667775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 6048057 - 6048002
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| ||||||||||||| |||||||||||  | ||||||||||||||||    
T  6048057 ttcattcaattaatgatgtatgtggttcatattatgggtcacatacatcattaatt 6048002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 7498427 - 7498494
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattca-ataatgatgtatgtga 150  Q
    ||||||||||||| |||| ||||||||||||||| |||||| |||||||||  |||||||||||||||    
T  7498427 tactccctccgtttttaaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtga 7498494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 19687614 - 19687482
Alignment:
Q  83 atttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||||| |||| |||| | ||| || | ||||||| |||||||||| ||||||||||||| || ||   ||||| |||||||||||||||    
T  19687614 atttactccctccgtttttaaatatatgcaaattttactttttaggttcattcaattaatgatgtatgtggtttatgacatgaactacatacatcattaa 19687515  T
Q  180 ttaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||    ||||||| || |||| ||||||| |||||||    
T  19687514 tt----gaatgaacctaaaaagtaaaatttgcttata 19687482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 32786263 - 32786131
Alignment:
Q  83 atttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||||   || |||||| ||| || | ||||||| |||||||||| ||||||||||||| | |||| ||||||  ||||||||||||      
T  32786263 atttactccctccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcatt-- 32786166  T
Q  180 ttaattgaatgaatcttaaaaataaaattcgcttata 216  Q
      ||||||||||| || |||| ||||||| |||||||    
T  32786165 --aattgaatgaacctaaaaagtaaaatttgcttata 32786131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 28737842 - 28737903
Alignment:
Q  105 tataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaa 163  Q
    ||||||||||||||| ||||  | |||||||||| ||||||||||||| |||||||||||||    
T  28737842 tataagtaaaattgactttttaaattcattcaattaatgatgtatgtggttcatattatgaa 28737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 2693806 - 2693701
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||| ||||||| |||| |||||| |||||  | ||||||| |||||||| | ||||||||||||| | |||||||||||  |||||||||||||| ||    
T  2693806 tactctctccgtttttaaatataagcaaaatctactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaata 2693707  T
Q  183 attgaa 188  Q
    | ||||    
T  2693706 aatgaa 2693701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 12349940 - 12349863
Alignment:
Q  105 tataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| | ||||||| |||||||| | ||||||||||||| | |||||||||| | ||||||||||||||    
T  12349940 tataagtaaaatttactttttagattcattcatttaatgatgtatgtggtccatattatgagtcacatacatcattaa 12349863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 13853516 - 13853464
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat 136  Q
    ||||||||| |||||||||||||| |||||||||  |||| ||||||||||||    
T  13853516 tactccctctgttattaattataaataaaattgactttttaagttcattcaat 13853464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 13902019 - 13902116
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    |||||| |||||| |||| |||||| |||||||| ||||||| |||||| | | ||||||||||||| | |||||||||||  |||||||||| ||||    
T  13902019 tactccatccgtttttaaatataagcaaaattgactttttaggttcattaatttaatgatgtatgtggtccatattatgaaccacatacatcaataat 13902116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 7418983 - 7418890
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||| |||||||| ||| ||||||||||||| |  ||||||||||  ||||||||||||    ||||||||||| || |||| ||||||| |||||||    
T  7418983 ttttaagttcattaaattaatgatgtatgtggtctatattatgaaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttata 7418890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 21478575 - 21478647
Alignment:
Q  112 aaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||    
T  21478575 aaaattgactttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaatt 21478647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 25363877 - 25363786
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaataatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    ||||||||||||| |||| || ||| |||||||| ||||||| ||||||   |||||||||||||||| |||||| ||||  |||||||| ||||    
T  25363877 tactccctccgtttttaaatacaagcaaaattgactttttaggttcatt---taatgatgtatgtgatccatattgtgaaccacatacataatta 25363786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 26597309 - 26597213
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  ||||||||||||||    
T  26597309 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaa 26597213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 35063457 - 35063561
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaa 183  Q
    ||||||||||||| |||| |||||| |||||||| ||||| ||||||||||| ||||||||||||| |  ||| ||||||  ||||||||||||||||||    
T  35063457 tactccctccgtttttaaatataagcaaaattgactttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattaa 35063556  T
Q  184 ttgaa 188  Q
     ||||    
T  35063557 atgaa 35063561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 43483928 - 43484062
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| ||||||||||| |  |||||||||    ||||    
T  43483928 tactccctccgttcttaaatataagcaaatttcactttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatc----atta 43484023  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||| || |||| ||||||| ||||||| ||||    
T  43484024 attgaatgaacctaaaaagtaaaatttgcttatatttaa 43484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 44282259 - 44282393
Alignment:
Q  84 tttactccctccgttattaattataagtaaaattgatt-tttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    |||||||||||||||   ||||||||| ||| |||| | ||||| |||||||||| ||||||||||||| |||||||| || |  |||||||||||||      
T  44282259 tttactccctccgttgccaattataagcaaatttgactctttaggttcattcaattaatgatgtatgtggttcatattgtggaccacatacatcatta-- 44282356  T
Q  181 taattgaatgaatcttaaaaataaaattcgcttataatt 219  Q
      ||||||||||||| |||||| ||||| ||||||||||    
T  44282357 --attgaatgaatctaaaaaattaaatttgcttataatt 44282393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 1647184 - 1647088
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  || | ||||||||||||||| ||||||| |||||||| | |||||||||||||||||||| |||| || ||||||||||||||    
T  1647184 tactccctccgtattttaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtgattcataatatggatcacatacatcattaa 1647088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 5040074 - 5040162
Alignment:
Q  96 gttattaattataagtaaaattgat-ttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||||||||| ||||  |||||| |||||||||| ||||||||||||| | |||||||||||  ||||||||||||||||    
T  5040074 gttattaattataagtaaatttgacattttagattcattcaattaatgatgtatgtggtccatattatgaacaacatacatcattaatt 5040162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 34188463 - 34188364
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||| ||||| |||| || | ||||||| |||||||||| ||||||||||||| | |||| ||||||| ||||||||||||||||    
T  34188463 ttactccctccgttcttaaatataaataaattttactttttaggttcattcaattaatgatgtatgtggtccataatatgaataacatacatcattaatt 34188364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 44838918 - 44838820
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgatttttag--ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||| || |||| |||||||||||||||||||| |  |||||||||| |||||| |||||| ||||||||||| |  ||||||||||||||||    
T  44838918 tactccttccatttttaaatataagtaaaattgattttttggattcattcaattaatgatatatgtggttcatattatggaccacatacatcattaatt 44838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 42631917 - 42631794
Alignment:
Q  90 ccctccgttattaattataagtaaaattgatttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||||| |||| |||||| ||| || | |||  ||||||||||| ||||||||||||| | |||||||| ||  ||||||||||||||||    |||    
T  42631917 ccctccgtttttaaatataagcaaattttactttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaatt----gaa 42631822  T
Q  189 tgaatcttaaaaataaaattcgcttata 216  Q
    ||||||| |||| ||||||| |||||||    
T  42631821 tgaatctaaaaagtaaaatttgcttata 42631794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 1647036 - 1647132
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  || | |||||| |||||| ||||||   ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||||    
T  1647036 tactccctccgtattttaatataagcaaaatttattttttaggttcattcatttaatgatgtatgtgatccatattatgaatcacatacatcattaa 1647132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 2827352 - 2827448
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||| ||||||| |||| ||||||||||||||| ||||  |||||||||| | ||||||||||||| |||||| ||| ||  ||||||||||||||    
T  2827352 tactctctccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtatgtggttcataatataaaccacatacatcattaa 2827448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 34194599 - 34194685
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||||||||||||| | ||||||||||| ||||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  34194599 ttcattcaattaatgatgtatgtggtccatattatgaactacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 34194685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 43484076 - 43483942
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| | |||| ||||||  ||||||||||||    |    
T  43484076 tactccctccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcatt----a 43483981  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||||| |||| | ||||| ||||||| ||||    
T  43483980 attgaatgaatctaaaaagtgaaatttgcttatatttaa 43483942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 3611914 - 3611815
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgat--ttttagttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||| |||| ||| |||| ||||||||||||||||  |||| |||||||||| |||||||||||||| |  ||| ||||||  ||||||||||||||||    
T  3611914 ttacttcctctgtttttaaatataagtaaaattgatttttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaatt 3611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 5419617 - 5419525
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||||||| ||||||||||||| |||||| |||| | ||||||||||    ||| |||||||||| || |||||||||||| ||||||| ||||    
T  5419617 gttcattcaatcaatgatgtatgtggttcataatatggactacatacatc----attgattgaatgaacctaaaaaataaaatttgcttatatttaa 5419525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 9203528 - 9203431
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaat 180  Q
    ||||||||||||| |||| |||||| |||| |||  ||||| ||||||||||| ||||||||||||| |  ||| ||||||| | |||||||||||||    
T  9203528 tactccctccgtttttaaatataagcaaaactgacttttttggttcattcaattaatgatgtatgtggtctataatatgaatcatatacatcattaat 9203431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 26492453 - 26492355
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||  |||||| | ||||||| |||||| ||| ||||||||||||| | |||||||||||  ||||||||||||||||    
T  26492453 tactccctccgtttttaaatataaacaaaatttactttttaggttcattgaattaatgatgtatgtggtccatattatgaaccacatacatcattaatt 26492355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 34188314 - 34188412
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||| | || ||||| |||| |||| ||||||| |||||||||| |||||||||||| |||||||||||| |  ||||||||||||||||    
T  34188314 tacttcctccgttttaaaatataaataaatttgactttttaggttcattcaattaatgatgtatgttattcatattatggaccacatacatcattaatt 34188412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 37922914 - 37922827
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||    ||||||||||| || |||| ||||||| |||||||    
T  37922914 gttcattcaattaatgatgtatgtggttcatattatggaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttata 37922827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 41569646 - 41569549
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||| |||||||  |||| |||||| |||||||| ||||  |||||||||| | |||||||||||||||| ||| ||||||  ||||||||||||||    
T  41569646 ttacttcctccgtctttaaatataagcaaaattgactttttaagttcattcatttaatgatgtatgtgatttataatatgaaccacatacatcattaa 41569549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 3611784 - 3611863
Alignment:
Q  105 tataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||||||||||   ||||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||    
T  3611784 tataagcaaaattgattttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaatt 3611863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 5040210 - 5040114
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgatttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  |||||||||| ||| || | |||  ||||||||||| ||||||||||||  |||||| |||| |  ||||||||||||||||    
T  5040210 tactccctccgtttctaattataagcaaattttactttaggttcattcaattaatgatgtatgttgttcataatatggaccacatacatcattaatt 5040114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 35202020 - 35201928
Alignment:
Q  86 tactccctccgttattaattataagtaaaattg-attttta-gttcattca-ataatgatgtatgtgattcatattatgaattacatacatca 175  Q
    ||||||||||||| |||| |||||| ||||||| ||||||| |||||||||  ||||||| ||||||||||||| |||| |  ||||||||||    
T  35202020 tactccctccgtttttaaatataagcaaaattgaatttttaggttcattcatttaatgatatatgtgattcataatatggaccacatacatca 35201928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 40802305 - 40802249
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  40802305 gttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 40802249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 15754526 - 15754483
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||||  |||||||||| |||||||||||||||    
T  15754526 taatgatgtatgtgatctatattatgaactacatacatcattaa 15754483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 40802199 - 40802297
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || | ||||  |||||||||||| ||||||||||||| | |||| ||||||  ||||||||||||||||    
T  40802199 tactccctccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 40802297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 41569550 - 41569593
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||    
T  41569550 taatgatgtatgtggttcatattataaatcacatacatcattaa 41569593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 9331430 - 9331337
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgatttttagttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| |||||| |||| ||||||||||||||| |||| |||||||||  ||||||||||| || || ||| |||| |  ||||||||||||||    
T  9331430 tactccatccgtttttaaatataagtaaaattga-ttttggttcattcatttaatgatgtatatggttaataatatggacaacatacatcattaa 9331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 32032988 - 32033050
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||| ||||||||||||| ||||||||||| || | |||||| ||||||||| ||||    
T  32032988 ttcattcaattaatgatgtatgtggttcatattatggatcaaatacattattaattaaatgaa 32033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 32033093 - 32032995
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgat-ttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| |||| |||||| |||||| || |||||| |||||| ||| ||| |||||| |||| |||| ||||||  ||||||||||||||||    
T  32033093 tactccctccgtttttaactataagcaaaattaatcttttaggttcatttaattaataatgtatttgatccataatatgaaccacatacatcattaatt 32032995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 33761000 - 33761059
Alignment:
Q  153 catattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||||||||||||    | ||||||||||||| | |||||||||||| |||||||    
T  33761000 catattatgaattacatacatc----aataattgaatgaatttaaaaaataaaatttgcttata 33761059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 34194662 - 34194575
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||  |||||| |||| |  ||||||||||||||||    |||||||||| |||| ||||||| |||||||    
T  34194662 gttcattcaattaatgatgtatgtagttcataatatggaccacatacatcattaatt----gaatgaatctaaaaagtaaaatttgcttata 34194575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 37922850 - 37922937
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||| ||||||  |||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  37922850 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 37922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 38884048 - 38883961
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||  | |||||||| ||  ||||||||||||||||    ||||||| || |||||||||||| |||||||    
T  38884048 gttcattcaattaatgatgtatgttgtccatattataaaccacatacatcattaatt----gaatgaacctaaaaaataaaatttgcttata 38883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 39655413 - 39655511
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||   || |||||| ||| |||| ||||||| |||||||||| ||||||||||||| | ||||||||| |  ||||||||||||||||    
T  39655413 tactccctccgttccaaaatataagcaaatttgactttttaggttcattcaattaatgatgtatgtggtccatattatggaccacatacatcattaatt 39655511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 44838770 - 44838868
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||| |||| |||||| |||||||| ||||||| || ||||||| ||||||||||||| | |||| ||||||  ||||| ||||||||||    
T  44838770 tactccatccgtttttaaatataagcaaaattgactttttagatttattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaatt 44838868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 5419511 - 5419632
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||| |||| |||| |||||| ||| || ||||||   ||||||||||| ||||||||||||  | |||||||||||  |||||||||    |||     
T  5419511 tactcccttcgtttttaaatataagcaaattttattttttaggttcattcaatcaatgatgtatgtagtccatattatgaaccacatacatc----attg 5419606  T
Q  183 attgaatgaatcttaaaaataaaatt 208  Q
    |||||||||| || ||||||||||||    
T  5419607 attgaatgaacctaaaaaataaaatt 5419632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 9203402 - 9203478
Alignment:
Q  108 aagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||| ||||  ||||||||| || |||||||||| |||||||||||||  |  ||||||||||||||||    
T  9203402 aagtaaaattgactttttaagttcattcgattaatgatgtatatgattcatattatagaccacatacatcattaatt 9203478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 26492331 - 26492403
Alignment:
Q  112 aaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||   ||||||||||| ||||||||||||| |||||| |||| |  ||||||||||||||||    
T  26492331 aaaattgattttttaggttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaatt 26492403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 36826962 - 36827027
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttagttcattca-ataatgatgtatgtg 149  Q
    ||||||||||||| |||| |||||  |||||||| |||||||||||||||  ||||||||||||||    
T  36826962 tactccctccgtttttaaatataaacaaaattgattttttagttcattcatttaatgatgtatgtg 36827027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 40716785 - 40716871
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| ||||||||||||| | |||||||| ||  ||||||||||||||||||    || || || |||||||||||| |||||||    
T  40716785 ttcattcaattaatgatgtatgtggtacatattataaaccacatacatcattaattaa----attaagctaaaaaataaaatttgcttata 40716871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 42631772 - 42631873
Alignment:
Q  83 atttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||||  ||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| || ||| |||| |  ||||||||||||||    
T  42631772 atttactccctccgtttctaaatataagcaaattttactttttagattcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaa 42631871  T
Q  180 tt 181  Q
    ||    
T  42631872 tt 42631873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 2552924 - 2552848
Alignment:
Q  104 ttataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatt 177  Q
    ||||||||||| |||| ||||||| |||||||||| ||||||||||||| | |||||||| ||  ||||||||||||    
T  2552924 ttataagtaaagttgactttttaggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcatt 2552848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 5918315 - 5918215
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||  | |||||||| |||| |||| ||||||| |||||| ||| ||||||||||||| |||||| |||  | ||||||||||| ||||||    
T  5918315 tactccctccgtattcaattataaataaatttgactttttagcttcattaaattaatgatgtatgtggttcatagtatagactacatacatcaataatta 5918216  T
Q  183 a 183  Q
    |    
T  5918215 a 5918215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 8568922 - 8568866
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||    
T  8568922 gttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaatt 8568866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 13832469 - 13832565
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || ||||||||||||| |||||| || |||||||| | || |||||||||| |||||||| ||||  ||||||||||||||    
T  13832469 tactccctccgtttcaaaatataagtaaaatttattttttagattcattcattcaaagatgtatgtggttcatattctgaaccacatacatcattaa 13832565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 27781922 - 27781978
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||||||| ||  ||||||||||||||||    
T  27781922 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaatt 27781978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 35447884 - 35447799
Alignment:
Q  128 tcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||| ||||||||||||| | |||||||||||  | |||||    |||||||||||||||| || |||| ||||||| |||||||    
T  35447884 tcattcaattaatgatgtatgtggtccatattatgaaccatataca----taattaattgaatgaacctaaaaagtaaaatttgcttata 35447799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 647 - 520
Alignment:
Q  93 tccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||| ||||||||| |||||||||  ||||  ||||||||||| |||||||||||||||  ||||||| ||  |||||||||| ||||||    |||    
T  647 tccgttactaattataaataaaattgacgttttaggttcattcaattaatgatgtatgtgatcaatattataaaccacatacatcaataatta----aat 552  T
Q  190 gaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||| |||| ||||||| ||||||||||||    
T  551 gaatctaaaaagtaaaatttgcttataattaa 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 32070457 - 32070555
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||||| | || |||||||||| |||||||||   ||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  32070457 tactccctccgttctaaaatataagtaaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 32070555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 42579164 - 42579057
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| || |||| |||||||||| || | ||||||| |||||||||| ||||||||||||| |||||| |||| | |||||||||||||||||    
T  42579164 ttactccctccatttttaaatataagtaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggactacatacatcattaatt 42579065  T
Q  182 aattgaat 189  Q
    || |||||    
T  42579064 aaatgaat 42579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 14152186 - 14152282
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| ||||||||  |||||||||||||||  ||| |||| ||||||| |||||||||||  ||||||||||||||    
T  14152186 tactccctccgtttttaaatataagcaaaattgatttttttagttcattcatttaaggatgcatgtgatccatattatgaaccacatacatcattaa 14152282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 3463294 - 3463198
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||| |  |||| ||||||||||||||| ||||||| |||||||| | ||||||||||||||| |||||||| ||| ||||||||||||||    
T  3463294 tactccctccatctttaaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtgatccatattataaatcacatacatcattaa 3463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 18967369 - 18967272
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| |||| ||||| |||||||||  ||||| ||||||||| | |||||||||| || | |||||||||||  ||||||||||||||    
T  18967369 ttactccctccgtttttaaatataactaaaattgactttttttgttcattcatttaatgatgtatttggtccatattatgaaccacatacatcattaa 18967272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 20195391 - 20195312
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| ||||||||||||| | |||||||||||| ||||||||||||    |||||||||||||| |||| |||||||    
T  20195391 gttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcatt----aattgaatgaatctaaaaagtaaaatt 20195312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 30202480 - 30202578
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| | |||| |||| |||||| ||| |||| ||||||| |||||||||| ||||||||||||||||||||||||  | |||||||||||||||||    
T  30202480 tactccattcgtttttaaatataagcaaatttgactttttaggttcattcaatcaatgatgtatgtgattcatattatagactacatacatcattaatt 30202578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 34466206 - 34466144
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| |||||||||||| ||||||||||||| ||||||||||| | |||||||||||||||||    
T  34466206 ttttaagttcattcaattaatgatgtatgtggttcatattatggactacatacatcattaatt 34466144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 35567283 - 35567191
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||   |||||| |||||||||||||| |||| | |||||||||||||||    
T  35567283 ttactccctccgtttttaaatataagtaaaattgattttttagattcatt---taatgaagtatgtgattcataatatgga-tacatacatcattaa 35567191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 40739637 - 40739507
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||||||| | || |||||||||| |||||||||   ||||||||||| ||||||||||||| ||||||||||| |  ||||| |||    |||    
T  40739637 ttactctctccgttctaaaatataagtaaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatatatc----att 40739542  T
Q  182 aattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| || |||| ||||||| |||||||    
T  40739541 aattgaatgaacctaaaaagtaaaatttgcttata 40739507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 20195285 - 20195414
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||| |||||||| | || |||||||||| || | ||||||| |||||||||| |||||||||||||||||||| |||| |  |||||||||    ||||    
T  20195285 tacttcctccgttttaaaatataagtaaattttactttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatc----atta 20195380  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||| || |||| ||||||| |||||||    
T  20195381 attgaatgaacctaaaaactaaaatttgcttata 20195414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 35567144 - 35567234
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttagttcattcaataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||||||| ||||||| |||||   ||||||||||||| || |||||||||||| |||||| |||||||    
T  35567144 tactccctccgtttttaaatataagcaaaattgattttttaggtcatt---taatgatgtatgt-atccatattatgaatcacatacttcattaa 35567234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 44949485 - 44949390
Alignment:
Q  87 actccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||| |||| |||||| |||||| ||||||  |||||||||| | ||||||||||||| | |||||||| ||  ||||||||||||||    
T  44949485 actccctccgtttttaaatataagcaaaatttattttttaagttcattcatttaatgatgtatgtggtccatattattaaccacatacatcattaa 44949390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 25668449 - 25668512
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    ||||||||||| ||||||||||||||| |||||||| ||  |||||||||||||||||| ||||    
T  25668449 gttcattcaattaatgatgtatgtgatccatattataaaccacatacatcattaattaaatgaa 25668512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 29573958 - 29573860
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttta--gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| |||||| |||| ||||||||||| ||||||||   ||||||| ||| ||||||||||||| || |||||||| | || ||||||||||||||    
T  29573958 tactccatccgtttttaaatataagtaaaagtgattttttaggttcatttaattaatgatgtatgtggtttatattatggactatatacatcattaatt 29573860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 29771757 - 29771812
Alignment:
Q  127 ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  29771757 ttcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaatt 29771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 4898267 - 4898180
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||| ||| ||||||||||||    ||||||||||| || |||| ||||||| |||||||    
T  4898267 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttata 4898180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 4945661 - 4945574
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||||||| ||| ||||||||||||    ||||||||||| || |||| ||||||| |||||||    
T  4945661 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttata 4945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 29771820 - 29771741
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| ||||||||||||| |||||| |||| || ||||||||||||    |||||||||||||| |||| |||||||    
T  29771820 gttcattcaattaatgatgtatgtggttcataatatggatcacatacatcatt----aattgaatgaatctaaaaagtaaaatt 29771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 37486143 - 37486045
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || | ||||||| |||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  37486143 tactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaatt 37486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 38532443 - 38532541
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||| ||||||| |||||||||| |||||| | ||||||| || ||||||| ||| || |||||||| |||||||||||| ||||| ||||||||||    
T  38532443 tactccatccgttactaattataagcaaaattaactttttagattgattcaattaataatatatgtgatgcatattatgaatcacatatatcattaatt 38532541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 604909 - 604868
Alignment:
Q  179 attaattgaatgaatcttaaaaataaaattcgcttataatta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  604909 attaattgaatgaatctaaaaaataaaatttgcttataatta 604868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 24971244 - 24971330
Alignment:
Q  127 ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||| |||||||||||||| | ||||||||| | ||||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  24971244 ttcattcaactaatgatgtatgtggtccatattatggactacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 24971330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 85822 - 85732
Alignment:
Q  93 tccgttattaattataagtaaaattgattttta---gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| ||||||||||  |||||||||||||    ||||||||||| ||||||||||||| || ||| ||||||  ||||||||||||||    
T  85822 tccgtttttaattataaacaaaattgatttttttaggttcattcaattaatgatgtatgtggttaataatatgaaccacatacatcattaa 85732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 2795412 - 2795348
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||| ||||||||||||| | |||| ||||||  |||||||||||||||||| |||||    
T  2795412 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattaaatgaat 2795348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 4101944 - 4102036
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattca-ataatgatgtatgtgattcatattatgaattacatacatca 175  Q
    ||||||||||||| |||| ||||||||||||||| |||||| |||||||||  |||||||||||||  |  ||||||||||  ||||||||||    
T  4101944 tactccctccgtttttaaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtagtctatattatgaacgacatacatca 4102036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 5204983 - 5204931
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaa 188  Q
    |||||||||||||| ||||||||||| |  |||||||||||||||||| ||||    
T  5204983 taatgatgtatgtggttcatattatggaccacatacatcattaattaaatgaa 5204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 7993241 - 7993145
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattttt-agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||| |||  |||| ||||||||||||| |||||| || ||||||| | ||||||||||||| |||||| |||| | ||||||||| |||||    
T  7993241 ttactcccttcgtctttaaatataagtaaaattaattttttaggtcattcatttaatgatgtatgtggttcataatatggactacatacattattaa 7993145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 27327932 - 27327876
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| |||||||||| |||||||||||||| |  ||||||||||||||||    
T  27327932 gttcattcaattaatgatgtatctgattcatattatggaccacatacatcattaatt 27327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 31596941 - 31596808
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    |||||||||||||  |||||||||| |||||| | ||||||| |||||||| | || |||||||||  |||||| |||| || ||||||||||||||||     
T  31596941 tactccctccgtttataattataagcaaaatttactttttaggttcattcatttaacgatgtatgtcgttcataatatggatcacatacatcattaatt- 31596843  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataatta 220  Q
       |||||||| | |||||| |||||  ||||||||||    
T  31596842 ---gaatgaatataaaaaattaaatttacttataatta 31596808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 32473562 - 32473481
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    ||||||| |||||| |  ||||||||||  ||||||||||||||||    |||||||||| |||||||||||| ||||||| ||||    
T  32473562 taatgatatatgtggtctatattatgaaccacatacatcattaatt----gaatgaatctaaaaaataaaatttgcttatatttaa 32473481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 42230666 - 42230570
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-ttttta-gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| || | |||||| |||||||| |||||| ||||||||| | ||||||||||||| | |||||||| ||  ||||||||||||||    
T  42230666 tactccctccgttttttaatataagcaaaattgactttttatgttcattcatttaatgatgtatgtggtccatattataaaccacatacatcattaa 42230570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 2795359 - 2795435
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||||||||||||| ||||||||||| |  |||||||||    |||||||||||||| || |||| ||||||| |||||||    
T  2795359 taatgatgtatgtggttcatattatggaccacatacatc----attaattgaatgaacctaaaaagtaaaatttgcttata 2795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 31619862 - 31619819
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| | |||||||||||| ||||||||||||||    
T  31619862 taatgatgtatgtggtacatattatgaatcacatacatcattaa 31619819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 4898161 - 4898259
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || | ||||||| |||||||||| |||||||||||||||| ||| |||| |  ||||||||||||||||    
T  4898161 tactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaatt 4898259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 4945555 - 4945653
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||  ||| |||||| ||| || | ||||||| |||||||||| |||||||||||||||| ||| |||| |  ||||||||||||||||    
T  4945555 tactccctccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaatt 4945653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 10041650 - 10041580
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    |||| |||||||||||| ||||||||||||| |  ||||||| ||  |||||||||||||||||| |||||    
T  10041650 ttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaat 10041580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 26269331 - 26269418
Alignment:
Q  126 gttcattcaataa-tgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||||| | ||||||||||| |||||||| ||  |||||||| ||||||||    ||||||||| ||| |||||||| |||||||    
T  26269331 gttcattcaataaataatgtatgtgatccatattataaaccacatacattattaatta----aatgaatctaaaatataaaatttgcttata 26269418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 27327868 - 27327955
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| | |||| ||||||| | |||||||    |||||||||||||| || |||||| ||||| |||||||    
T  27327868 gttcattcaattaatgatgtatgtggtccataatatgaatcagatacatc----attaattgaatgaacctaaaaaatcaaatttgcttata 27327955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 31596808 - 31596889
Alignment:
Q  101 taattataagtaaaattgatttttagt--tcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| || ||||||  |  ||||||||| ||||||||||||||| |||||||||||  ||||||||| ||||    
T  31596808 taattataagtaaatttaattttttatattcattcaattaatgatgtatgtgatccatattatgaacgacatacatcgttaa 31596889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 33425441 - 33425364
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattat 160  Q
    |||||| |||||| |||| |||||| |||||||| ||||  | |||||||| | ||||||||||||||||||||||||    
T  33425441 tactccatccgtttttaaatataagcaaaattgactttttaaattcattcatttaatgatgtatgtgattcatattat 33425364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 34240862 - 34240948
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta----attaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| |||||| |||||| ||||||||||| |  |||||||||||||    |||||||||||||| || ||||||||||||    
T  34240862 gttcattcaattaatgat-tatgtggttcatattatggaccacatacatcattaattcattaattgaatgaacctaaaaaataaaatt 34240948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 34911200 - 34911113
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| ||||||||||||| |  ||||||||||  ||||||||||||    |||||||| || || |||||||||||| |||||||    
T  34911200 gttcattcaattaatgatgtatgtggtcgatattatgaaccacatacatcatt----aattgaataaacctaaaaaataaaatttgcttata 34911113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 36490581 - 36490502
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaatt 208  Q
    ||||||||||| ||||||||||||| | | |||||||||  ||||||||||||    |||||||||||||| |||| |||||||    
T  36490581 gttcattcaattaatgatgtatgtggtacgtattatgaaccacatacatcatt----aattgaatgaatctaaaaattaaaatt 36490502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 85733 - 85778
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||||    
T  85733 taatgatgtatgtggttcatattattaaccacatacatcattaatt 85778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 19250258 - 19250165
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcat 176  Q
    |||| |||||||| |||| ||||||||||||||  ||||||| |||||| | | ||||||| ||||||| ||||||||||| ||||| ||||||    
T  19250258 tacttcctccgtttttaaatataagtaaaattggctttttaggttcatttatttaatgatgaatgtgatccatattatgaactacattcatcat 19250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 21209037 - 21208940
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| | || |||||| |||||| | ||||||| |||||||| | ||||||||||||| | |||||||||||  | ||||||||||||    
T  21209037 ttactccctccgttttaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaa 21208940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 25899354 - 25899459
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| | || ||||||||||||| | ||||||| || ||||| | ||||||||||||| |||||| ||||||  ||||| |||||||| ||    
T  25899354 tactccctccgttttaaaatataagtaaaatttactttttaggtttattcatttaatgatgtatgtggttcataatatgaaccacatatatcattaaata 25899453  T
Q  183 attgaa 188  Q
    | ||||    
T  25899454 aatgaa 25899459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 29573810 - 29573915
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| |||| |||||| |||||||| ||||||| |||||| || ||||||||||| |  | |||| ||| ||  |||||||||||||||||    
T  29573810 tactccctccgtttttaaatataagcaaaattgactttttagattcattaaattaatgatgtatatagtccataatataaaccacatacatcattaatta 29573909  T
Q  183 attgaa 188  Q
    | ||||    
T  29573910 aatgaa 29573915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 31619820 - 31619873
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    ||||||||||||||||||||| |||| |  |||||||||||||| ||| |||||    
T  31619820 taatgatgtatgtgattcataatatgtaccacatacatcattaaataaatgaat 31619873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 17378184 - 17378101
Alignment:
Q  101 taattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||| ||||| ||| |||||||||  |||||||||||| ||||||||||||| |||||||| |  |  ||||||||||||||||    
T  17378184 taatcataagcaaatttgattttttaagttcattcaattaatgatgtatgtggttcatattgtagaccacatacatcattaatt 17378101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 17844059 - 17843966
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttata 216  Q
    |||| |||||||||||| ||||||||||||| | |||||||| ||  | ||||||||||||||    ||||||| || |||| ||||||| |||||||    
T  17844059 ttttaagttcattcaattaatgatgtatgtggtccatattataaaccatatacatcattaatt----gaatgaacctaaaaagtaaaatttgcttata 17843966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 18461518 - 18461446
Alignment:
Q  86 tactccctccgttattaa-ttataagtaaaattgat-ttttag-ttcattcaa-taatgatgtatgtgattca 154  Q
    |||||||||||||  ||| ||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||    
T  18461518 tactccctccgtttctaaattataagtaaaattgattttttagtttcattcaattaatgatgtatgtggttca 18461446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 18967220 - 18967316
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||||||||||||||||| || || ||||| | ||||||||||||| |||||| |||| |  | ||||||||||||    
T  18967220 tactccctccgtatttaaatataagtaaaattgattttttagatttattcatttaatgatgtatgtggttcataatatggaccaaatacatcattaa 18967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 20128793 - 20128874
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||| ||||||||| | ||| |||||||  |||||||||||||||||    |||||| || ||||||||||||| |||||| ||||    
T  20128793 taataatgtatgtggtacatgttatgaaccacatacatcattaatta----aatgaacctaaaaaataaaattcacttatatttaa 20128874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 27692690 - 27692650
Alignment:
Q  139 tgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||||||||||| |  ||||||||||||||    
T  27692690 tgatgtatgtgattcatattatggaccacatacatcattaa 27692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 32070563 - 32070507
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||||||||||||| | |||| ||||||  ||||||||||||||||    
T  32070563 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 32070507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 33363555 - 33363651
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||||  | ||||||| |||||||| | ||||||| ||||| | |||||||||||  ||||||||||||||    
T  33363555 tactccctccgtttttaaatataagcaaaatctactttttaggttcattcatttaatgatgcatgtggtccatattatgaaccacatacatcattaa 33363651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 33363703 - 33363607
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| |||||| |||| |  |||| |||||||||    
T  33363703 tactccctccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcataatatggaccacatgcatcattaa 33363607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 36490479 - 36490604
Alignment:
Q  89 tccctccgttattaattataagtaaaattgatttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattg 186  Q
    ||||||||||  ||| ||||| |||  || |||||||| |||||||||| ||||||||||||| |||||| || | |  |||||||||    ||||||||    
T  36490479 tccctccgtttctaaatataaataattttaatttttagattcattcaattaatgatgtatgtggttcataatacgtaccacatacatc----attaattg 36490574  T
Q  187 aatgaatcttaaaaataaaattcgcttata 216  Q
    |||||| || |||| ||||||| |||||||    
T  36490575 aatgaacctaaaaagtaaaatttgcttata 36490604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 40320234 - 40320178
Alignment:
Q  126 gttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    ||||||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||    
T  40320234 gttcattcaattaataatgtatgtggtacatattatgaatcacatatatcattaatt 40320178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 42230518 - 42230614
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||  |||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| || ||| |||| |  ||||||||||||||    
T  42230518 tactccctccgtctttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtggtttataatatggaccacatacatcattaa 42230614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 42579068 - 42579149
Alignment:
Q  136 taatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    |||||||||||||  | |||||||||||  |||||||||    ||||||||||||||||| |||| |||||||  |||||| ||||    
T  42579068 taatgatgtatgtagtccatattatgaaccacatacatc----attaattgaatgaatctaaaaagtaaaatttacttatatttaa 42579149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 44949338 - 44949434
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||  ||| |||||| |||||||| ||||||| |||||||| | ||||||||||||| || ||| |||| |  ||||||||||||||    
T  44949338 tactccctccgtttctaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttaataatatggaccacatacatcattaa 44949434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 66064 - 65930
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt-ag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||  || | |||||| ||||||||||||| || |||||||| | ||||||||||||||| |||||||||||  ||||||||||    |||    
T  66064 tactccctccgtgttttaatataagcaaaattgattttttagattcattcatttaatgatgtatgtgatccatattatgaaccacatacatca----tta 65969  T
Q  183 attgaatgaatcttaaaaataaaattcgcttataattaa 221  Q
    | ||||||||||| |||| |||| || ||||||| ||||    
T  65968 aatgaatgaatctaaaaagtaaattttgcttatatttaa 65930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 65916 - 66045
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||  |||| |||||| |||||| | ||||||| |||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |     
T  65916 tactccctccgtatttaaatataagcaaaatttactttttagattcattcatttaatgatgtatgtggttcataatatggatcacatacatcattaaat- 66014  T
Q  183 attgaatgaatcttaaaaataaaattcgcttata 216  Q
       |||||||||| |||||| || || |||||||    
T  66015 ---gaatgaatctaaaaaatcaattttgcttata 66045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 63436 - 63511
Alignment:
Q  88 ctccctccgttattaattataagtaaaattga-ttttta-gttcattcaa-taatgatgtatgtgattcatattat 160  Q
    ||||||| ||||| ||||||||||||| |||| |||||| |||||||||| ||||||||||| |||| ||||||||    
T  63436 ctccctctgttatcaattataagtaaatttgactttttacgttcattcaattaatgatgtatatgatccatattat 63511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 48888 - 48964
Alignment:
Q  105 tataagtaaaattga-tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||| |||||||| ||||| ||||||||| | |||||| |||||| |||||||||||||| ||||||||||||||    
T  48888 tataagcaaaattgactttttggttcattcatttaatgatatatgtggttcatattatgaatcacatacatcattaa 48964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 49012 - 48920
Alignment:
Q  90 ccctccgttattaattataagtaaaattga--tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||| |||| |||||| | |||| |  ||||| ||||||||| | |||||||||||||||||||| ||||||  ||||| ||||||||    
T  49012 ccctccgtttttaaatataagcataatttacttttttggttcattcatttaatgatgtatgtgattcataatatgaaccacatatatcattaa 48920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 22439 - 22536
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgatttt-tag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||| |||| |||||| |||||||| ||| ||| |||||||| | ||||||||||||| |||||||||| ||  | ||||||||||||    
T  22439 ttactccctccgtttttaaatataagcaaaattgactttgtaggttcattcacttaatgatgtatgtggttcatattattaaccatatacatcattaa 22536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 38002 - 38132
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattgattt-ttag-ttcattcaa-taatgatgtatgtgattcatattatgaattacatacatcattaatt 181  Q
    |||||||||||||| |||| |||||| ||| || |||| |||| ||||||||| |||||||||||||| |||||| |||  |  |||||||||    |||    
T  38002 ttactccctccgtttttaaatataagcaaattttatttgttaggttcattcaactaatgatgtatgtggttcataatatagaccacatacatc----att 38097  T
Q  182 aattgaatgaatcttaaaaataaaattcgcttata 216  Q
    ||||||||||| || |||| ||||||| |||||||    
T  38098 aattgaatgaacctaaaaagtaaaatttgcttata 38132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 36555 - 36459
Alignment:
Q  85 ttactccctccgttattaattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatta 178  Q
    |||||||||||||| | || |||||| |||||| | ||||||| |||||||| | ||||||||||||| |||||| |||| | ||||||||||||||    
T  36555 ttactccctccgttctaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtggttcataatatggactacatacatcatta 36459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 36406 - 36502
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga-tttttag-ttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    |||||||||||||   || |||||| |||||| | ||||||| |||||||| ||||||||||||||  | |||||||||||  ||||||||||||||    
T  36406 tactccctccgtttcaaaatataagcaaaattcactttttaggttcattcatataatgatgtatgtagtccatattatgaaccacatacatcattaa 36502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 58332 - 58428
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaatgaatcttaaaaataaaattcgcttataat 218  Q
    |||| |||||||||||| ||||||||||||| | |||| ||||||  |||||||||    |||||||||||||| || |||| | ||||| |||||||||    
T  58332 ttttaagttcattcaatcaatgatgtatgtggtccataatatgaaccacatacatc----attaattgaatgaacctaaaaagtcaaatttgcttataat 58427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 58428 - 58350
Alignment:
Q  102 aattataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcatt 177  Q
    ||||||||| ||| |||| ||||||| |||||||||| ||||||||||||| ||||||||||| |  ||||||||||||    
T  58428 aattataagcaaatttgactttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatacatcatt 58350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 49807 - 49701
Alignment:
Q  86 tactccctccgttattaattataagtaaaattga--tttttagttcattca-ataatgatgtatgtgattcatattatgaattacatacatcattaatta 182  Q
    ||||||||||||| || | |||||||||||||||  ||||| |||||||||  |||||||||||||| |||||| |||  |  || ||||||||||| ||    
T  49807 tactccctccgttttttaatataagtaaaattgacttttttggttcattcatttaatgatgtatgtggttcataatatataccacgtacatcattaaata 49708  T
Q  183 attgaat 189  Q
    | |||||    
T  49707 aatgaat 49701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 5420 - 5490
Alignment:
Q  120 tttttagttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaattaattgaat 189  Q
    |||| |||||||||||| ||||||||||||| |  ||||||| ||  |||||||||||||||||| |||||    
T  5420 ttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaat 5490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 13710 - 13786
Alignment:
Q  105 tataagtaaaattga-tttttag-ttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||| | ||||||||| |  ||||||||||||||    
T  13710 tataagtaaaattgactttttagattcattcaattaatgatgtatgtggtccatattatg-accacatacatcattaa 13786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 17430 - 17526
Alignment:
Q  86 tactccctccgttattaattataagtaaaattgattttt--agttcattcaat-aatgatgtatgtgattcatattatgaattacatacatcattaa 179  Q
    ||||||||||||| |||| |||||| |||| | ||||||  |||||||||| | ||||||||||||| |  ||||||| ||  ||||||||||||||    
T  17430 tactccctccgtttttaaatataagcaaaaataattttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaa 17526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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