View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5363_low_7 (Length: 308)
Name: NF5363_low_7
Description: NF5363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5363_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 55102413 - 55102137
Alignment:
| Q |
16 |
atctaaggaaactgagggatcagcagtcagaaatgagctacaagtgtaaccaggacctggggccatgaatgtaacattattaggagcttgtccaagtgaa |
115 |
Q |
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| T |
55102413 |
atctaaggacactgagggatcagaagtcagaaatgagctacaagtgtaaccaggacctggggccatgaatgtaacattattaggagcttgtccaagtgaa |
55102314 |
T |
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| Q |
116 |
ttttctttttcctccaagtttcttacttcaagttcaaatgaagacaatgaattgaaagaatcaacggctcgggcagagaggcggccaccacgacagcaat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
55102313 |
ttttctttttcctccaagtttcttacttcaagttcaaatgaagacaatgaattgaaagaatcaacagctcgggcagagaggcggccaccacgacagcaat |
55102214 |
T |
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| Q |
216 |
ggtctgacctgttttgtgacacatctggagatatatcaactatgattggatcttttttgcatgaatgtggcatctga |
292 |
Q |
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| T |
55102213 |
ggtctgacctgttttgtgacacatctggagatatatcaactatgattggatcttttttgcatgaatgtggcatctga |
55102137 |
T |
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