View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5368-Insertion-3 (Length: 256)
Name: NF5368-Insertion-3
Description: NF5368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5368-Insertion-3 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 6512710 - 6512462
Alignment:
| Q |
7 |
aggatgaatgggagataaggagaagaatacctactggaattgaggggtttagtacgaacatgaatgagaatgcaattagagttcttctttagaaggtggt |
106 |
Q |
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| T |
6512710 |
aggatgaatgggagataaggagaagaatacctactggaattgagaggtttggtacgaacatgaatgagaatgcaattggagttcttctttagaaggtggt |
6512611 |
T |
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| Q |
107 |
ccaccgcccatttcaccgcgcactggctattccgaccggtgttgatggcaatgacggtggttttggcggcggtggcagctcctaattcattagtaatcat |
206 |
Q |
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| T |
6512610 |
ccaccgcccatttcaccgcgcactggctattccgaccggtgttgatggcaatgacggtggttttggcggcggtggcagctcctaattcattagtaatcat |
6512511 |
T |
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| Q |
207 |
ttgcatgaagaattaaggttagttacttttttagaaaaaataagctcttg |
256 |
Q |
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| T |
6512510 |
ttgcatgaagaattaaggttagttacttttttaga-aaaataagctcttg |
6512462 |
T |
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