View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5368_high_27 (Length: 243)
Name: NF5368_high_27
Description: NF5368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5368_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 26806438 - 26806219
Alignment:
| Q |
3 |
aatttataaaatacagggaccatctccaaaatttatactaacattcaattatattagaacttaata-ttttttcgtcaannnnnnnctttctaatcgtgt |
101 |
Q |
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| T |
26806438 |
aatttataaaatacagggaccatctccaaaatttatactaacattcaattatactagaacttattatttttttcgtcaatttttttctttctaatcgtgt |
26806339 |
T |
|
| Q |
102 |
tattatcggacattaaatattaccctctcttagtcataatttaatttgaaccttgatgcgtcgtattgttggatctactccttctactacactcaatcct |
201 |
Q |
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||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
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| T |
26806338 |
tattatcggacattaaatattaccc-ctcttagtca-----gaatttgaaccttgatgtgtcatattgttggatctactccttctactacactcaatcct |
26806245 |
T |
|
| Q |
202 |
cattggtcaccgaacctcacctttat |
227 |
Q |
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||||||||||| |||||||| ||||| |
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| T |
26806244 |
cattggtcacccaacctcacttttat |
26806219 |
T |
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