View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5368_low_40 (Length: 224)
Name: NF5368_low_40
Description: NF5368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5368_low_40 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 34768120 - 34768310
Alignment:
| Q |
14 |
caaaggagagaaagatgaaacccaatccaaaccaactttaatcgtatttagttattgactacaggaatttatttaaaataatttatttatttgtaattat |
113 |
Q |
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| T |
34768120 |
caaaggagagaaagatgaaacccagtccaaaccaactttaatcgtatttagttattgactacaggaatttatttaaaataatttatttatttgttattat |
34768219 |
T |
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| Q |
114 |
tctcatatttaacctagcccagttttatgacatgtttctttatttctaaatttgtcttctttatataacttttttacgcaatatcagagtt |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
34768220 |
tctcatatttaacctagcccagttttatgacatgtttctttatttctaaatttgtcttctttatacaacttttttacgcaatatcaaagtt |
34768310 |
T |
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