View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5369_high_13 (Length: 350)

Name: NF5369_high_13
Description: NF5369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5369_high_13
NF5369_high_13
[»] chr4 (72 HSPs)
chr4 (150-350)||(5707320-5707520)
chr4 (150-350)||(5713948-5714148)
chr4 (150-350)||(19926767-19926967)
chr4 (150-350)||(26970463-26970663)
chr4 (150-350)||(55612683-55612883)
chr4 (150-350)||(868597-868797)
chr4 (150-350)||(26963640-26963840)
chr4 (150-350)||(10621340-10621540)
chr4 (150-350)||(10628419-10628619)
chr4 (152-350)||(18262214-18262412)
chr4 (152-350)||(28393141-28393339)
chr4 (152-350)||(4426611-4426808)
chr4 (152-350)||(18269070-18269273)
chr4 (162-348)||(8845215-8845401)
chr4 (162-348)||(8858179-8858365)
chr4 (150-265)||(12357136-12357251)
chr4 (158-349)||(20311299-20311491)
chr4 (156-342)||(5668140-5668327)
chr4 (156-350)||(10677562-10677753)
chr4 (156-350)||(10891202-10891393)
chr4 (152-349)||(5616215-5616414)
chr4 (156-350)||(35223576-35223760)
chr4 (57-114)||(5713855-5713912)
chr4 (57-114)||(26963547-26963604)
chr4 (57-114)||(26970370-26970427)
chr4 (58-114)||(19927003-19927059)
chr4 (57-114)||(10621576-10621633)
chr4 (58-114)||(5707228-5707284)
chr4 (58-114)||(12357044-12357100)
chr4 (60-114)||(868507-868561)
chr4 (58-114)||(10628655-10628711)
chr4 (58-114)||(17142372-17142428)
chr4 (58-114)||(55612594-55612650)
chr4 (12-58)||(4561481-4561527)
chr4 (12-58)||(5757085-5757131)
chr4 (12-58)||(9556443-9556489)
chr4 (12-58)||(14757569-14757615)
chr4 (58-112)||(28393380-28393434)
chr4 (12-57)||(17048200-17048245)
chr4 (57-114)||(18268975-18269032)
chr4 (58-114)||(4426847-4426903)
chr4 (12-58)||(17810185-17810231)
chr4 (12-57)||(10712770-10712815)
chr4 (12-57)||(10926540-10926585)
chr4 (12-57)||(14954314-14954359)
chr4 (12-57)||(27533940-27533985)
chr4 (12-57)||(43256224-43256269)
chr4 (12-52)||(10056653-10056693)
chr4 (12-52)||(13591992-13592032)
chr4 (176-342)||(21454152-21454319)
chr4 (12-57)||(12487625-12487670)
chr4 (12-57)||(14746649-14746694)
chr4 (12-57)||(25689784-25689829)
chr4 (65-114)||(55992680-55992729)
chr4 (287-339)||(39074218-39074270)
chr4 (199-266)||(39074278-39074346)
chr4 (14-57)||(40619829-40619872)
chr4 (73-114)||(5668371-5668412)
chr4 (12-57)||(15497101-15497146)
chr4 (12-49)||(15884123-15884160)
chr4 (12-57)||(28385542-28385587)
chr4 (66-114)||(8845118-8845166)
chr4 (66-114)||(8858082-8858130)
chr4 (74-114)||(18262136-18262176)
chr4 (218-349)||(56516124-56516255)
chr4 (12-58)||(33742293-33742337)
chr4 (60-114)||(20311207-20311261)
chr4 (12-57)||(10694955-10695000)
chr4 (12-57)||(10908721-10908766)
chr4 (12-57)||(15008264-15008309)
chr4 (24-52)||(14650838-14650866)
chr4 (66-114)||(24699958-24700006)
[»] scaffold0234 (4 HSPs)
scaffold0234 (150-350)||(2328-2528)
scaffold0234 (150-350)||(11219-11419)
scaffold0234 (57-114)||(2564-2621)
scaffold0234 (57-114)||(11455-11512)
[»] chr6 (64 HSPs)
chr6 (150-350)||(29308890-29309090)
chr6 (150-350)||(29315850-29316050)
chr6 (152-350)||(16566327-16566525)
chr6 (150-350)||(27381259-27381459)
chr6 (150-350)||(27471642-27471842)
chr6 (152-350)||(17684476-17684674)
chr6 (150-350)||(17691447-17691647)
chr6 (152-350)||(188984-189182)
chr6 (152-350)||(11651725-11651923)
chr6 (152-350)||(25537166-25537364)
chr6 (152-340)||(13359286-13359474)
chr6 (169-342)||(8509941-8510115)
chr6 (189-350)||(20553594-20553755)
chr6 (60-114)||(17691683-17691737)
chr6 (57-114)||(27381495-27381552)
chr6 (57-114)||(27471878-27471935)
chr6 (57-114)||(29308797-29308854)
chr6 (57-114)||(29315757-29315814)
chr6 (57-114)||(17684712-17684769)
chr6 (12-58)||(8243774-8243820)
chr6 (12-58)||(11566775-11566821)
chr6 (58-112)||(11651630-11651684)
chr6 (12-58)||(18917413-18917459)
chr6 (12-58)||(19870503-19870549)
chr6 (12-58)||(22862859-22862905)
chr6 (12-58)||(23394981-23395027)
chr6 (12-57)||(14472185-14472230)
chr6 (12-57)||(18955910-18955955)
chr6 (12-57)||(23414894-23414939)
chr6 (57-114)||(25537405-25537462)
chr6 (12-57)||(27556652-27556697)
chr6 (12-58)||(1644621-1644667)
chr6 (188-350)||(17850502-17850663)
chr6 (12-58)||(23989833-23989879)
chr6 (12-57)||(14979453-14979498)
chr6 (12-57)||(17743387-17743432)
chr6 (12-57)||(18696497-18696542)
chr6 (12-57)||(19773608-19773653)
chr6 (12-57)||(27416005-27416050)
chr6 (173-342)||(27925772-27925946)
chr6 (12-57)||(28103964-28104009)
chr6 (12-57)||(31477957-31478002)
chr6 (12-55)||(16760211-16760254)
chr6 (157-212)||(31258065-31258120)
chr6 (7-57)||(18913955-18914005)
chr6 (7-57)||(18937213-18937263)
chr6 (57-114)||(13359512-13359569)
chr6 (12-57)||(15705509-15705554)
chr6 (12-57)||(17377863-17377908)
chr6 (12-57)||(18706315-18706360)
chr6 (12-57)||(22949022-22949067)
chr6 (12-57)||(22952978-22953023)
chr6 (12-57)||(23871466-23871511)
chr6 (12-57)||(23875422-23875467)
chr6 (66-114)||(16566563-16566611)
chr6 (58-114)||(189221-189280)
chr6 (12-57)||(15174163-15174208)
chr6 (12-57)||(15817587-15817632)
chr6 (166-231)||(22259925-22259990)
chr6 (12-57)||(22805942-22805987)
chr6 (12-57)||(23956161-23956206)
chr6 (12-58)||(12618991-12619035)
chr6 (15-57)||(15875393-15875435)
chr6 (72-114)||(16394484-16394526)
[»] chr1 (46 HSPs)
chr1 (150-350)||(18252030-18252230)
chr1 (150-350)||(18532521-18532721)
chr1 (150-350)||(27131416-27131616)
chr1 (152-350)||(21171240-21171438)
chr1 (152-350)||(27310584-27310782)
chr1 (152-350)||(16359042-16359240)
chr1 (156-342)||(36816648-36816834)
chr1 (150-350)||(3855926-3856126)
chr1 (150-342)||(22657236-22657429)
chr1 (156-350)||(27277564-27277756)
chr1 (184-342)||(12006554-12006712)
chr1 (58-114)||(18251936-18251992)
chr1 (58-114)||(18532757-18532813)
chr1 (184-349)||(12014292-12014457)
chr1 (58-114)||(27310821-27310877)
chr1 (12-58)||(1010636-1010682)
chr1 (12-58)||(16375606-16375652)
chr1 (12-58)||(20228956-20229002)
chr1 (12-58)||(21407268-21407314)
chr1 (58-114)||(16359280-16359336)
chr1 (162-348)||(9917927-9918106)
chr1 (12-58)||(52639454-52639500)
chr1 (12-57)||(1925276-1925321)
chr1 (53-114)||(3856164-3856225)
chr1 (12-57)||(13881447-13881492)
chr1 (12-57)||(20924290-20924335)
chr1 (57-114)||(21171479-21171536)
chr1 (12-57)||(22130972-22131017)
chr1 (12-57)||(33797531-33797576)
chr1 (12-57)||(48603462-48603507)
chr1 (12-52)||(41781654-41781694)
chr1 (57-111)||(36816881-36816935)
chr1 (15-57)||(48520521-48520563)
chr1 (57-110)||(22657469-22657522)
chr1 (12-57)||(29764346-29764391)
chr1 (12-57)||(46198433-46198478)
chr1 (12-57)||(51326802-51326847)
chr1 (12-48)||(27653288-27653324)
chr1 (58-114)||(27131652-27131704)
chr1 (12-57)||(12271564-12271609)
chr1 (156-225)||(30720625-30720694)
chr1 (12-49)||(50000780-50000817)
chr1 (58-114)||(27277800-27277856)
chr1 (12-51)||(43543144-43543183)
chr1 (180-257)||(3403248-3403325)
chr1 (180-257)||(3443494-3443571)
[»] chr3 (97 HSPs)
chr3 (153-350)||(13211305-13211502)
chr3 (150-350)||(6110064-6110264)
chr3 (150-350)||(10572599-10572799)
chr3 (152-350)||(16482490-16482688)
chr3 (156-350)||(17781125-17781319)
chr3 (150-350)||(15600891-15601091)
chr3 (150-350)||(15607436-15607636)
chr3 (156-350)||(10579362-10579556)
chr3 (152-350)||(18522665-18522863)
chr3 (150-350)||(13248607-13248807)
chr3 (150-350)||(15357593-15357793)
chr3 (152-350)||(18519980-18520175)
chr3 (150-336)||(8490488-8490674)
chr3 (156-350)||(19089752-19089946)
chr3 (152-350)||(17200191-17200389)
chr3 (150-311)||(18640792-18640953)
chr3 (169-350)||(15342226-15342407)
chr3 (152-350)||(13516813-13517011)
chr3 (156-350)||(32056907-32057101)
chr3 (156-342)||(1647536-1647726)
chr3 (150-342)||(29924971-29925163)
chr3 (150-342)||(29974124-29974316)
chr3 (152-338)||(16200128-16200313)
chr3 (152-338)||(16200434-16200619)
chr3 (157-350)||(24253395-24253589)
chr3 (256-350)||(17136465-17136559)
chr3 (55-114)||(6109969-6110028)
chr3 (152-214)||(18534758-18534820)
chr3 (57-114)||(13248514-13248571)
chr3 (58-114)||(8490396-8490452)
chr3 (57-114)||(13211210-13211267)
chr3 (58-114)||(18640989-18641045)
chr3 (49-114)||(17200427-17200492)
chr3 (58-114)||(17136137-17136193)
chr3 (56-114)||(15607672-15607731)
chr3 (12-58)||(4107544-4107590)
chr3 (12-58)||(4111396-4111442)
chr3 (12-58)||(7109614-7109660)
chr3 (12-58)||(7113549-7113595)
chr3 (58-108)||(10579603-10579653)
chr3 (12-58)||(11069984-11070030)
chr3 (12-58)||(11165676-11165722)
chr3 (12-58)||(22321580-22321626)
chr3 (12-58)||(22336635-22336681)
chr3 (12-58)||(27409791-27409837)
chr3 (12-58)||(28949640-28949686)
chr3 (12-58)||(55022783-55022829)
chr3 (12-57)||(11300577-11300622)
chr3 (12-57)||(12339715-12339760)
chr3 (57-114)||(15351237-15351294)
chr3 (57-114)||(15357829-15357886)
chr3 (12-57)||(16796495-16796540)
chr3 (152-197)||(18510924-18510969)
chr3 (58-114)||(16482727-16482782)
chr3 (58-114)||(18519885-18519941)
chr3 (57-108)||(10572840-10572891)
chr3 (12-58)||(4588920-4588966)
chr3 (15-57)||(5223313-5223355)
chr3 (57-114)||(15601127-15601185)
chr3 (12-58)||(30065862-30065908)
chr3 (12-57)||(324244-324289)
chr3 (12-57)||(12469910-12469955)
chr3 (57-114)||(13516718-13516775)
chr3 (12-57)||(14670932-14670977)
chr3 (12-57)||(15465084-15465129)
chr3 (12-57)||(15964886-15964931)
chr3 (12-57)||(15968810-15968855)
chr3 (12-57)||(15972734-15972779)
chr3 (12-57)||(16643181-16643226)
chr3 (12-57)||(17691774-17691819)
chr3 (57-114)||(17781358-17781415)
chr3 (57-114)||(19089985-19090042)
chr3 (12-57)||(37439783-37439828)
chr3 (12-57)||(52989788-52989833)
chr3 (12-57)||(54876456-54876501)
chr3 (58-114)||(1647768-1647824)
chr3 (12-52)||(14682436-14682476)
chr3 (12-52)||(14966183-14966223)
chr3 (58-114)||(32057144-32057200)
chr3 (15-58)||(15617290-15617333)
chr3 (14-57)||(19775682-19775725)
chr3 (15-57)||(21837434-21837476)
chr3 (57-114)||(18510828-18510885)
chr3 (57-114)||(18522569-18522626)
chr3 (57-114)||(18534662-18534719)
chr3 (12-57)||(35961596-35961641)
chr3 (12-57)||(43889692-43889737)
chr3 (12-58)||(14499241-14499287)
chr3 (12-50)||(18700373-18700411)
chr3 (12-57)||(41826-41871)
chr3 (12-57)||(11854650-11854695)
chr3 (12-57)||(11914082-11914127)
chr3 (12-52)||(22652134-22652174)
chr3 (58-114)||(29924879-29924935)
chr3 (58-114)||(29974032-29974088)
chr3 (12-57)||(16325249-16325294)
chr3 (12-48)||(16979218-16979254)
[»] scaffold0220 (2 HSPs)
scaffold0220 (150-350)||(18288-18488)
scaffold0220 (58-114)||(18196-18252)
[»] chr7 (64 HSPs)
chr7 (150-350)||(29327784-29327984)
chr7 (150-350)||(11536069-11536269)
chr7 (150-350)||(11542987-11543187)
chr7 (152-350)||(15152445-15152643)
chr7 (152-350)||(15148144-15148342)
chr7 (152-350)||(18561009-18561207)
chr7 (152-342)||(12750828-12751018)
chr7 (156-350)||(12738542-12738736)
chr7 (152-342)||(18257857-18258047)
chr7 (156-338)||(13392157-13392338)
chr7 (172-342)||(2364917-2365086)
chr7 (183-342)||(7396221-7396381)
chr7 (57-114)||(11543223-11543280)
chr7 (58-114)||(2653275-2653331)
chr7 (58-114)||(12738443-12738499)
chr7 (156-340)||(39111819-39112002)
chr7 (57-114)||(11536305-11536362)
chr7 (57-114)||(12750732-12750789)
chr7 (57-114)||(15152349-15152406)
chr7 (57-113)||(29327689-29327745)
chr7 (12-58)||(33020-33066)
chr7 (12-58)||(70912-70958)
chr7 (12-58)||(75021-75067)
chr7 (12-58)||(12704806-12704852)
chr7 (12-58)||(12714777-12714823)
chr7 (12-58)||(12718581-12718627)
chr7 (12-58)||(12723492-12723538)
chr7 (12-58)||(16907348-16907394)
chr7 (12-58)||(18279316-18279362)
chr7 (12-58)||(18283279-18283325)
chr7 (12-58)||(26292308-26292354)
chr7 (58-114)||(15148049-15148105)
chr7 (12-58)||(16114154-16114200)
chr7 (12-58)||(16117307-16117353)
chr7 (12-57)||(1858897-1858942)
chr7 (12-57)||(14258460-14258505)
chr7 (12-57)||(25927314-25927359)
chr7 (12-57)||(39722180-39722225)
chr7 (12-57)||(45170153-45170198)
chr7 (12-57)||(46580741-46580786)
chr7 (57-113)||(13392029-13392085)
chr7 (224-267)||(3132748-3132791)
chr7 (12-57)||(8940259-8940304)
chr7 (12-57)||(13918591-13918636)
chr7 (12-57)||(14273524-14273569)
chr7 (12-49)||(15720013-15720050)
chr7 (12-57)||(16460831-16460876)
chr7 (12-57)||(17060490-17060535)
chr7 (12-57)||(20487551-20487596)
chr7 (12-57)||(32301297-32301342)
chr7 (12-52)||(16550712-16550752)
chr7 (12-52)||(16614910-16614950)
chr7 (12-48)||(16998611-16998647)
chr7 (58-114)||(18258087-18258143)
chr7 (12-52)||(32160910-32160950)
chr7 (12-57)||(2530202-2530246)
chr7 (200-265)||(10234179-10234244)
chr7 (12-49)||(16579776-16579813)
chr7 (12-49)||(16585850-16585887)
chr7 (150-182)||(2653207-2653239)
chr7 (58-114)||(18560913-18560969)
chr7 (12-51)||(8468733-8468772)
chr7 (12-51)||(17232934-17232973)
chr7 (12-57)||(15112953-15112998)
[»] scaffold0390 (4 HSPs)
scaffold0390 (150-350)||(6941-7141)
scaffold0390 (150-350)||(13957-14157)
scaffold0390 (57-114)||(7177-7234)
scaffold0390 (58-114)||(14193-14249)
[»] chr8 (43 HSPs)
chr8 (150-350)||(21940665-21940865)
chr8 (152-350)||(22171491-22171687)
chr8 (156-350)||(24642655-24642849)
chr8 (152-350)||(28554885-28555083)
chr8 (156-349)||(6094129-6094322)
chr8 (156-283)||(24636860-24636987)
chr8 (58-114)||(21940573-21940629)
chr8 (58-114)||(22070108-22070164)
chr8 (57-114)||(22171395-22171452)
chr8 (57-110)||(24642555-24642608)
chr8 (58-114)||(6094031-6094087)
chr8 (162-350)||(38232384-38232570)
chr8 (171-325)||(2375027-2375179)
chr8 (12-58)||(19278430-19278476)
chr8 (12-58)||(21972732-21972778)
chr8 (12-58)||(21976817-21976863)
chr8 (12-58)||(22111844-22111890)
chr8 (180-341)||(32872857-32873019)
chr8 (12-58)||(43251726-43251772)
chr8 (57-114)||(28554790-28554847)
chr8 (12-57)||(17461118-17461163)
chr8 (12-57)||(18833572-18833617)
chr8 (12-57)||(18862792-18862837)
chr8 (12-57)||(21828161-21828206)
chr8 (12-57)||(23659417-23659462)
chr8 (12-57)||(23914047-23914092)
chr8 (12-52)||(22238085-22238125)
chr8 (12-57)||(16402068-16402113)
chr8 (12-57)||(19880127-19880172)
chr8 (12-57)||(21410864-21410909)
chr8 (12-57)||(21805356-21805401)
chr8 (12-52)||(23409810-23409850)
chr8 (12-52)||(37515720-37515760)
chr8 (14-57)||(19808430-19808473)
chr8 (14-57)||(23478379-23478422)
chr8 (12-57)||(8414418-8414463)
chr8 (12-57)||(11775021-11775066)
chr8 (188-251)||(10920234-10920297)
chr8 (57-111)||(2374946-2375000)
chr8 (12-41)||(14397928-14397957)
chr8 (12-52)||(19929556-19929597)
chr8 (58-95)||(24636605-24636642)
chr8 (12-49)||(26454017-26454054)
[»] chr5 (34 HSPs)
chr5 (150-350)||(24695473-24695673)
chr5 (150-350)||(18569870-18570070)
chr5 (152-350)||(19714505-19714703)
chr5 (156-350)||(19707225-19707419)
chr5 (155-338)||(27347497-27347679)
chr5 (156-342)||(22547031-22547217)
chr5 (150-259)||(39537962-39538071)
chr5 (154-335)||(17285754-17285935)
chr5 (156-259)||(31886537-31886640)
chr5 (57-114)||(24695709-24695766)
chr5 (215-350)||(18807041-18807176)
chr5 (58-114)||(19714742-19714798)
chr5 (56-114)||(19707462-19707520)
chr5 (154-335)||(17298907-17299088)
chr5 (58-114)||(27347722-27347778)
chr5 (263-350)||(39538701-39538788)
chr5 (12-58)||(15236982-15237028)
chr5 (12-58)||(19472867-19472913)
chr5 (12-58)||(20295760-20295806)
chr5 (12-57)||(18356206-18356251)
chr5 (12-57)||(40723734-40723779)
chr5 (12-57)||(20910982-20911027)
chr5 (14-57)||(10753278-10753321)
chr5 (56-114)||(18570108-18570166)
chr5 (12-57)||(17011024-17011069)
chr5 (12-57)||(22107500-22107545)
chr5 (12-52)||(29448018-29448058)
chr5 (58-113)||(39537870-39537925)
chr5 (176-266)||(33477389-33477479)
chr5 (12-57)||(263156-263201)
chr5 (12-57)||(6765838-6765883)
chr5 (12-57)||(33473272-33473317)
chr5 (12-57)||(33895711-33895756)
chr5 (12-46)||(20910863-20910897)
[»] chr2 (34 HSPs)
chr2 (150-346)||(21330259-21330455)
chr2 (150-350)||(18796506-18796706)
chr2 (152-348)||(18619807-18620002)
chr2 (156-295)||(19692598-19692737)
chr2 (216-342)||(20977958-20978084)
chr2 (58-114)||(21330493-21330549)
chr2 (184-350)||(36270199-36270366)
chr2 (12-58)||(24628626-24628672)
chr2 (12-58)||(24649270-24649316)
chr2 (12-58)||(27379580-27379626)
chr2 (12-58)||(27383626-27383672)
chr2 (12-58)||(27601709-27601755)
chr2 (12-57)||(31345126-31345171)
chr2 (14-58)||(12901661-12901705)
chr2 (12-58)||(10101792-10101838)
chr2 (12-57)||(1283303-1283348)
chr2 (12-57)||(9784691-9784736)
chr2 (12-57)||(23069349-23069394)
chr2 (12-57)||(27472429-27472474)
chr2 (12-57)||(30345138-30345183)
chr2 (12-57)||(41531151-41531196)
chr2 (184-342)||(18822115-18822275)
chr2 (12-57)||(22459628-22459673)
chr2 (12-57)||(23707354-23707399)
chr2 (12-57)||(24681424-24681469)
chr2 (12-57)||(24918120-24918165)
chr2 (12-49)||(34874278-34874315)
chr2 (12-57)||(18358799-18358844)
chr2 (57-114)||(19692773-19692830)
chr2 (12-49)||(21081802-21081839)
chr2 (12-57)||(24671005-24671050)
chr2 (12-57)||(34492200-34492245)
chr2 (12-52)||(21914926-21914966)
chr2 (57-114)||(18796411-18796470)
[»] scaffold0433 (2 HSPs)
scaffold0433 (150-350)||(7107-7307)
scaffold0433 (57-114)||(7014-7071)
[»] scaffold0186 (2 HSPs)
scaffold0186 (150-350)||(25997-26197)
scaffold0186 (57-113)||(26231-26287)
[»] scaffold0657 (2 HSPs)
scaffold0657 (150-350)||(993-1193)
scaffold0657 (58-114)||(901-957)
[»] scaffold0063 (2 HSPs)
scaffold0063 (152-350)||(5531-5729)
scaffold0063 (57-114)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (152-333)||(230365-230545)
scaffold0008 (58-114)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (150-214)||(8446-8510)
scaffold0176 (52-114)||(8546-8608)
[»] scaffold0203 (1 HSPs)
scaffold0203 (57-114)||(23769-23826)
[»] scaffold0326 (2 HSPs)
scaffold0326 (57-114)||(16522-16579)
scaffold0326 (150-183)||(16615-16648)
[»] scaffold0525 (1 HSPs)
scaffold0525 (12-58)||(4022-4068)
[»] scaffold0029 (3 HSPs)
scaffold0029 (12-58)||(65675-65721)
scaffold0029 (12-58)||(80628-80674)
scaffold0029 (12-58)||(61759-61805)
[»] scaffold0028 (1 HSPs)
scaffold0028 (12-58)||(58866-58912)
[»] scaffold0705 (1 HSPs)
scaffold0705 (57-114)||(41-98)
[»] scaffold0484 (1 HSPs)
scaffold0484 (12-57)||(862-907)
[»] scaffold0200 (1 HSPs)
scaffold0200 (12-57)||(17583-17628)
[»] scaffold0117 (1 HSPs)
scaffold0117 (12-57)||(39262-39307)
[»] scaffold0016 (1 HSPs)
scaffold0016 (12-57)||(207649-207694)
[»] scaffold0637 (1 HSPs)
scaffold0637 (58-114)||(8944-9000)
[»] scaffold0349 (1 HSPs)
scaffold0349 (14-58)||(12335-12379)
[»] scaffold0372 (1 HSPs)
scaffold0372 (15-58)||(5251-5294)
[»] scaffold0676 (1 HSPs)
scaffold0676 (12-58)||(363-409)
[»] scaffold0877 (1 HSPs)
scaffold0877 (12-57)||(2779-2824)
[»] scaffold0278 (1 HSPs)
scaffold0278 (12-57)||(7844-7889)
[»] scaffold0109 (1 HSPs)
scaffold0109 (12-57)||(36089-36134)
[»] scaffold0107 (2 HSPs)
scaffold0107 (12-57)||(15480-15525)
scaffold0107 (17-57)||(10155-10195)
[»] scaffold0096 (1 HSPs)
scaffold0096 (12-57)||(21176-21221)
[»] scaffold0051 (1 HSPs)
scaffold0051 (12-57)||(31133-31178)
[»] scaffold0037 (1 HSPs)
scaffold0037 (12-57)||(80482-80527)
[»] scaffold0031 (1 HSPs)
scaffold0031 (12-57)||(36233-36278)
[»] scaffold0020 (1 HSPs)
scaffold0020 (12-57)||(169815-169860)
[»] scaffold0017 (2 HSPs)
scaffold0017 (12-57)||(1231-1276)
scaffold0017 (12-57)||(7982-8027)
[»] scaffold0012 (1 HSPs)
scaffold0012 (12-57)||(189524-189569)
[»] scaffold0011 (1 HSPs)
scaffold0011 (12-57)||(125965-126010)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-57)||(71311-71356)
[»] scaffold0141 (1 HSPs)
scaffold0141 (12-55)||(14234-14277)
[»] scaffold0565 (2 HSPs)
scaffold0565 (60-114)||(10202-10256)
scaffold0565 (169-200)||(10127-10158)
[»] scaffold0061 (1 HSPs)
scaffold0061 (12-58)||(67449-67494)
[»] scaffold0747 (1 HSPs)
scaffold0747 (12-57)||(569-614)
[»] scaffold0462 (1 HSPs)
scaffold0462 (12-57)||(10519-10564)
[»] scaffold0434 (1 HSPs)
scaffold0434 (12-57)||(7007-7052)
[»] scaffold0415 (1 HSPs)
scaffold0415 (12-57)||(309-354)
[»] scaffold0293 (1 HSPs)
scaffold0293 (12-57)||(20276-20321)
[»] scaffold0290 (1 HSPs)
scaffold0290 (12-57)||(169-214)
[»] scaffold0229 (1 HSPs)
scaffold0229 (12-57)||(11648-11693)
[»] scaffold0157 (1 HSPs)
scaffold0157 (12-57)||(32807-32852)
[»] scaffold0138 (1 HSPs)
scaffold0138 (12-57)||(33216-33261)
[»] scaffold0123 (1 HSPs)
scaffold0123 (12-49)||(555-592)
[»] scaffold0034 (1 HSPs)
scaffold0034 (12-49)||(120026-120063)
[»] scaffold0022 (1 HSPs)
scaffold0022 (12-57)||(53904-53949)
[»] scaffold1783 (1 HSPs)
scaffold1783 (12-52)||(432-472)
[»] scaffold0767 (1 HSPs)
scaffold0767 (58-94)||(1-37)
[»] scaffold0575 (1 HSPs)
scaffold0575 (12-52)||(6225-6265)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-48)||(20769-20805)
[»] scaffold0306 (1 HSPs)
scaffold0306 (8-47)||(15017-15056)
[»] scaffold0741 (1 HSPs)
scaffold0741 (7-57)||(4330-4380)
[»] scaffold0780 (1 HSPs)
scaffold0780 (12-57)||(3393-3438)
[»] scaffold0599 (1 HSPs)
scaffold0599 (12-57)||(1358-1403)
[»] scaffold0317 (1 HSPs)
scaffold0317 (12-57)||(6968-7013)
[»] scaffold0170 (1 HSPs)
scaffold0170 (57-110)||(5877-5930)
[»] scaffold0125 (1 HSPs)
scaffold0125 (12-57)||(1940-1985)
[»] scaffold0076 (1 HSPs)
scaffold0076 (12-57)||(24663-24708)
[»] scaffold0058 (1 HSPs)
scaffold0058 (12-57)||(5757-5802)
[»] scaffold0001 (2 HSPs)
scaffold0001 (12-57)||(176091-176136)
scaffold0001 (12-57)||(168737-168782)
[»] scaffold0057 (1 HSPs)
scaffold0057 (12-52)||(70536-70576)
[»] scaffold0100 (1 HSPs)
scaffold0100 (12-51)||(36096-36135)
[»] scaffold0046 (1 HSPs)
scaffold0046 (12-57)||(22477-22522)
[»] scaffold0032 (2 HSPs)
scaffold0032 (179-251)||(92194-92267)
scaffold0032 (12-40)||(67288-67316)
[»] scaffold0023 (1 HSPs)
scaffold0023 (12-57)||(105090-105135)
[»] scaffold0359 (1 HSPs)
scaffold0359 (24-52)||(15597-15625)
[»] scaffold0073 (1 HSPs)
scaffold0073 (24-52)||(56983-57011)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-52)||(85560-85600)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-52)||(166426-166454)


Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 5707320 - 5707520
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  350 c 350  Q
    |    
T  5707520 c 5707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 5713948 - 5714148
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  350 c 350  Q
    |    
T  5714148 c 5714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 19926967 - 19926767
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  350 c 350  Q
    |    
T  19926767 c 19926767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 26970463 - 26970663
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  350 c 350  Q
    |    
T  26970663 c 26970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 55612683 - 55612883
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  350 c 350  Q
    |    
T  55612883 c 55612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 868597 - 868797
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  350 c 350  Q
    |    
T  868797 c 868797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 26963640 - 26963840
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  350 c 350  Q
    |    
T  26963840 c 26963840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 10621540 - 10621340
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  350 c 350  Q
    |    
T  10621340 c 10621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 10628619 - 10628419
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  350 c 350  Q
    |    
T  10628419 c 10628419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 18262214 - 18262412
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 28393339 - 28393141
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 28393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 4426808 - 4426611
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 4426611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 18269070 - 18269273
Alignment:
Q  152 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgt 246  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  247 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggt 346  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  347 agac 350  Q
    ||||    
T  18269270 agac 18269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 8845215 - 8845401
Alignment:
Q  162 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  262 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtag 348  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 8858179 - 8858365
Alignment:
Q  162 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  262 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtag 348  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  250 accccattaaacataa 265  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 349
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  158 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaag-tataacttaattgtgagaccccat 256  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |   || |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  257 taaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||| ||| || | |||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 342
Target Start/End: Complemental strand, 5668327 - 5668140
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  256 ttaaacataaggaaactattctcaaag--tatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||||||||||| |||  |||||| ||||||| |||||||||||||||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgt 5668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 10677753 - 10677562
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||  | ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||||||  || || | |||||| |||||||||||||||||||||||  | ||| ||||||| |||||||| ||| |||||||||||| |||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagac 10677562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 10891393 - 10891202
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||  | ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||||||  || || | |||||| |||||||||||||||||||||||  | ||| ||||||| |||||||| ||| |||||||||||| |||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagac 10891202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 152 - 349
Target Start/End: Original strand, 5616215 - 5616414
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||| ||||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||||||  ||| || ||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 350
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||| |||||||| | |||||||          |     
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    | ||||  ||||| | |||||| ||||||| ||||||||||||||||||  ||    |||| |||||||||||| |||||||||||| |||||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 5713855 - 5713912
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713855 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 26963547 - 26963604
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963547 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 26970370 - 26970427
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970370 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 10621633 - 10621576
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621633 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  60 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4561481 - 4561527
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4561481 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 4561527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 5757085 - 5757131
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5757085 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 5757131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 9556489 - 9556443
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9556489 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 9556443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 14757569 - 14757615
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14757569 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 14757615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 17048200 - 17048245
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17048200 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 17048245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 18268975 - 18269032
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268975 ttgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 17810231 - 17810185
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17810231 tgttgttgattatgtgaaatatttatatgccttatgtggaagatgtt 17810185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 10712815 - 10712770
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  10712815 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 10712770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 10926585 - 10926540
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  10926585 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 10926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 14954314 - 14954359
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  14954314 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 14954359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 27533985 - 27533940
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27533985 tgttgttggttatgtgaaatacttatatgccttatgtggaagatgt 27533940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 43256224 - 43256269
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43256224 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 43256269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 10056693 - 10056653
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10056693 tgttgttggttatgtgaaatatttatatgccttatgtggaa 10056653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 13591992 - 13592032
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13591992 tgttgttggttatgtgaaatatttatatgccttatgtggaa 13592032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 342
Target Start/End: Complemental strand, 21454319 - 21454152
Alignment:
Q  176 tttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaag-tataacttaattgtgagaccccattaaacataaggaaactat 274  Q
    ||||||||||| ||||||||| | |||||||||||||    |||||||||||||||  | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  275 tctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    | | ||| ||||  ||||||| |||||||| ||| ||||||| || ||| ||||| ||| ||||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgt 21454152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 12487670 - 12487625
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  12487670 tgttgttggttatgtgaaatatttatatgacttatgtgaaagatgt 12487625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 14746649 - 14746694
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  14746649 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 14746694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 25689829 - 25689784
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  25689829 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 25689784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  65 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  287 cgtagtcaagctttattgagaagtgagatatcattaaagcatagagactatta 339  Q
    ||||||||  |||||||| ||||||||||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  199 ctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 266  Q
    |||||||| ||||||| ||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 40619872 - 40619829
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  40619872 ttgttggttatgtgaaataattatatgccttatgtggaaaatgt 40619829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  73 taatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 15497101 - 15497146
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  15497101 tgttgttggttatgtgaaataattatatgtcttatgtggaaaatgt 15497146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 15884123 - 15884160
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15884123 tgttgttggttatgtgaaataattatatgccttatgtg 15884160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 28385587 - 28385542
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  28385587 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 28385542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  66 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  66 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  74 aatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 56516124 - 56516255
Alignment:
Q  218 taatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaagtatccgtagtcaagctttattgagaagtgagata 316  Q
    ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||  |||||||||||||||| |||    ||||    
T  56516124 taatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatctatagtcaagctttattgtgaataacgata 56516222  T
Q  317 tcattaaagcatagagactattatgtaggtaga 349  Q
      |||||| ||||||||||||||||||||||||    
T  56516223 gtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33742337 - 33742293
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  33742337 tgttgttggttatgtgaaatatt--tatgtcttatgtggaagatgtt 33742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  60 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 10694955 - 10695000
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||| ||||| |||||| |||||||||||| ||||    
T  10694955 tgttgttggttatgtaaaataattatattccttatgtggaaaatgt 10695000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 10908721 - 10908766
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||| ||||| |||||| |||||||||||| ||||    
T  10908721 tgttgttggttatgtaaaataattatattccttatgtggaaaatgt 10908766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15008309 - 15008264
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  15008309 tgttgttggttatgtgaaataattatatatcttatgtggaaaatgt 15008264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 14650866 - 14650838
Alignment:
Q  24 tgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||    
T  14650866 tgtgaaatatttatatgccttatgtggaa 14650838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 24699958 - 24700006
Alignment:
Q  66 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||| |||||||||||||||||  ||||| |||||||||||    
T  24699958 taagcccgaataaccaatctatattgattgaatttggttttgtatcatg 24700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 193; Significance: 1e-105; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 2528 - 2328
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  350 c 350  Q
    |    
T  2328 c 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 11419 - 11219
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  350 c 350  Q
    |    
T  11219 c 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 2621 - 2564
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2621 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 11512 - 11455
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11512 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 29308890 - 29309090
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  350 c 350  Q
    |    
T  29309090 c 29309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 29315850 - 29316050
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  350 c 350  Q
    |    
T  29316050 c 29316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 16566525 - 16566327
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 27381459 - 27381259
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  350 c 350  Q
    |    
T  27381259 c 27381259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 27471842 - 27471642
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  350 c 350  Q
    |    
T  27471642 c 27471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 17684674 - 17684476
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17684476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 17691647 - 17691447
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  350 c 350  Q
    |    
T  17691447 c 17691447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 189182 - 188984
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 188984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 11651725 - 11651923
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 11651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 25537364 - 25537166
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 25537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 152 - 340
Target Start/End: Complemental strand, 13359474 - 13359286
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattat 340  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||||||| ||| || || | ||||||||| |||||||||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattat 13359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 342
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  169 attttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 267  Q
    ||||| |||||||| ||||||||||||||  ||||||| |||||| |||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  268 aaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    |   |||| | |||||||  ||||| ||||||||||  ||| ||||||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 350
Target Start/End: Complemental strand, 20553755 - 20553594
Alignment:
Q  189 aataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 288  Q
    ||||||||| |||| |||| |||||| ||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  289 tagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||| ||  ||||||| |||||||||||  ||||||||||| ||| | |||||| |||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagac 20553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  60 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 27381552 - 27381495
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381552 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 27471935 - 27471878
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471935 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 29308797 - 29308854
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308797 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 29315757 - 29315814
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315757 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 17684769 - 17684712
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684769 ttgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 8243820 - 8243774
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8243820 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 8243774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 11566821 - 11566775
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11566821 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 11566775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 112  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 18917413 - 18917459
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18917413 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 18917459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 19870549 - 19870503
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19870549 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 19870503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 22862905 - 22862859
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22862905 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 22862859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 23395027 - 23394981
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23395027 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 23394981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 14472230 - 14472185
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14472230 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 14472185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 18955910 - 18955955
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18955910 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 18955955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 23414939 - 23414894
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23414939 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 23414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 25537462 - 25537405
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537462 ttgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 27556697 - 27556652
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27556697 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 27556652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 1644667 - 1644621
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  1644667 tgttgttggttatgtgaaatacttatatgccttatgtggaagatgtt 1644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 350
Target Start/End: Complemental strand, 17850663 - 17850502
Alignment:
Q  188 taataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 287  Q
    |||||||||||||| ||||| ||||   |||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  288 gtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
     |||||||||||| ||| ||||| | ||| |||| ||| ||| |||||||||| | |||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagac 17850502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 23989879 - 23989833
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  23989879 tgttgttggttaggtgaaatatttatatgccttatgtggaagatgtt 23989833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 14979453 - 14979498
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14979453 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 14979498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 17743432 - 17743387
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17743432 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 17743387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 18696542 - 18696497
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18696542 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 18696497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 19773608 - 19773653
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  19773608 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 19773653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 27416005 - 27416050
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27416005 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 27416050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 342
Target Start/End: Original strand, 27925772 - 27925946
Alignment:
Q  173 tgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 267  Q
    |||||||||||||||||||||||||| |||||||  ||||   ||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  268 aaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||| |||||| ||||||||  ||||||| |||||||  ||||||  ||| |||| ||||| | ||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgt 27925946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 28103964 - 28104009
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  28103964 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 28104009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 31477957 - 31478002
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  31477957 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 31478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 16760254 - 16760211
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagat 55  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  16760254 tgttgttggttatgtgaaatatttatatgacttatgtggaagat 16760211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  157 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 212  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 18914005 - 18913955
Alignment:
Q  7 tttggtgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18914005 tttgatgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 18913955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 18937263 - 18937213
Alignment:
Q  7 tttggtgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18937263 tttgatgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 18937213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 13359569 - 13359512
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359569 ttgtgggagtaagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 15705509 - 15705554
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  15705509 tgttgttggttatgtgaaatatttatatgtcttatgtggaaaatgt 15705554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 17377863 - 17377908
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  17377863 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 17377908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 18706360 - 18706315
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  18706360 tgtttttggttatgtgaaatatttatatgccttatgtggaaaatgt 18706315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 22949067 - 22949022
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  22949067 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 22949022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 22953023 - 22952978
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  22953023 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 22952978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 23871511 - 23871466
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  23871511 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 23871466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 23875467 - 23875422
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  23875467 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 23875422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  66 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 189280 - 189221
Alignment:
Q  58 tgttggaataagccctaatagccaatcta---tattgattgggtttggctttgtatcatg 114  Q
    ||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||||||    
T  189280 tgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 15174163 - 15174208
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  15174163 tgttgttggttatgtgaaataattatatgacttatgtggaaaatgt 15174208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 15817587 - 15817632
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  15817587 tgttgttggttatgtgaaataattatatgtcttatgtggaaaatgt 15817632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  166 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaa 231  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||||||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 22805987 - 22805942
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||    
T  22805987 tgttgttggttatgtgaaatatttatattcgttatgtggaaaatgt 22805942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 23956206 - 23956161
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  23956206 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 23956161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 12618991 - 12619035
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  12618991 tgttgttggttatgtgaaatatt--tatgtcttatgtggaagatgtt 12619035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 15875435 - 15875393
Alignment:
Q  15 tgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||    
T  15875435 tgttggttatgtgaaataattatatgtcttatgtggaaaatgt 15875393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  72 ctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 18252030 - 18252230
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  350 c 350  Q
    |    
T  18252230 c 18252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 18532721 - 18532521
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  350 c 350  Q
    |    
T  18532521 c 18532521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 27131616 - 27131416
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  350 c 350  Q
    |    
T  27131416 c 27131416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 21171438 - 21171240
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 21171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 27310782 - 27310584
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagac 27310584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 16359240 - 16359042
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagac 16359042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 156 - 342
Target Start/End: Complemental strand, 36816834 - 36816648
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||||||||||||| | |||||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgt 36816648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 3856126 - 3855926
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||||||| |||||| ||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  350 c 350  Q
    |    
T  3855926 c 3855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 150 - 342
Target Start/End: Complemental strand, 22657429 - 22657236
Alignment:
Q  150 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtga 248  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  249 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgt 22657236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||| ||| | ||||||| | |||| ||      
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatt-agtgtgacttaatcgcgaga-cctt 27277659  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||| |  || || | |||||| |||||||||||||||| ||||||||| |||  | |||| ||||||||||||||||||||||||| |||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 12006712 - 12006554
Alignment:
Q  184 aaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 283  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  284 atccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    || ||||||||||| ||| || |||| | |||| ||||||| | |||||| | ||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgt 12006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 349
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  184 aaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 283  Q
    |||||||||||||| ||||||||  |||||| |||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  284 atccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||| |||||||| || |||| | ||||  |||||||| || |||| ||||||| ||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 1010682 - 1010636
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1010682 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 1010636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 16375606 - 16375652
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16375606 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 16375652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 20228956 - 20229002
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20228956 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 20229002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 21407314 - 21407268
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21407314 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 21407268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 348
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  162 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 261  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||   |||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  262 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtag 348  Q
    ||||||| | |||||| ||| ||||  |||| |||||||||||  ||||| |||| |||| ||||||||||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 52639500 - 52639454
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  52639500 tgttgttggttatgtgaaatatttatacgccttatgtggaagatgtt 52639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1925276 - 1925321
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1925276 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 1925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 3856225 - 3856164
Alignment:
Q  53 gatgttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||| || |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856225 gatgttgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13881447 - 13881492
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13881447 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 13881492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 20924290 - 20924335
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20924290 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 20924335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 21171536 - 21171479
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171536 ttgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22130972 - 22131017
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22130972 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 22131017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 33797576 - 33797531
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  33797576 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 33797531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 48603507 - 48603462
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  48603507 tgttgttggctatgtgaaatatttatatgccttatgtggaagatgt 48603462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 41781654 - 41781694
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41781654 tgttgttggttatgtgaaatatttatatgccttatgtggaa 41781694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 36816935 - 36816881
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 111  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816935 ttgtcggattaagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 48520563 - 48520521
Alignment:
Q  15 tgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  48520563 tgttggttatgtgaaatatttatatgccttatgtggaaaatgt 48520521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 22657522 - 22657469
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 110  Q
    |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657522 ttgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 29764346 - 29764391
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29764346 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 29764391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 46198433 - 46198478
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  46198433 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 46198478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 51326847 - 51326802
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||    
T  51326847 tgttgttggttatgtgaaatgtttatatgccttatgtggaaaatgt 51326802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 27653288 - 27653324
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgt 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  27653288 tgttgttggttatgtgaaatatttatatgccttatgt 27653324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 12271609 - 12271564
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||    
T  12271609 tgttgttggttatgtgaaatgttcatatgccttatgtggaaaatgt 12271564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaa 225  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| | ||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 50000817 - 50000780
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  50000817 tgttgttggttatgtgaaataattatatgccttatgtg 50000780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 43543183 - 43543144
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtgga 51  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  43543183 tgttgttggttatgtgaaatgttcatatgccttatgtgga 43543144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  180 tttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccatt 257  Q
    ||||||| ||||||||||  || |||||||||||   ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  180 tttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccatt 257  Q
    ||||||| ||||||||||  || |||||||||||   ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 153 - 350
Target Start/End: Original strand, 13211305 - 13211502
Alignment:
Q  153 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  253 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 13211502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 6110064 - 6110264
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  350 c 350  Q
    |    
T  6110264 c 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 10572799 - 10572599
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  350 c 350  Q
    |    
T  10572599 c 10572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 16482688 - 16482490
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 17781319 - 17781125
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 15601091 - 15600891
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  350 c 350  Q
    |    
T  15600891 c 15600891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 15607636 - 15607436
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  350 c 350  Q
    |    
T  15607436 c 15607436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 10579556 - 10579362
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 10579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 18522665 - 18522863
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagac 18522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 13248607 - 13248807
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  350 c 350  Q
    |    
T  13248807 c 13248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 15357793 - 15357593
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  350 c 350  Q
    |    
T  15357593 c 15357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 18519980 - 18520175
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 150 - 336
Target Start/End: Original strand, 8490488 - 8490674
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagacta 336  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 19089946 - 19089752
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagac 19089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 17200389 - 17200191
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagac 17200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 169 - 350
Target Start/End: Complemental strand, 15342407 - 15342226
Alignment:
Q  169 attttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 268  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  269 aactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 13516813 - 13517011
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagac 13517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 32057101 - 32056907
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 32056907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 156 - 342
Target Start/End: Complemental strand, 1647726 - 1647536
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataa----cttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||| |||||||||||||||||||| | |||||||||||| |||||||||||||||||  | ||||| ||||||||||||||||||||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgt 1647536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 150 - 342
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 150 - 342
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 152 - 338
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactatt 338  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||||||| |||||| |||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 152 - 338
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactatt 338  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||||||| |||||| ||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 157 - 350
Target Start/End: Complemental strand, 24253589 - 24253395
Alignment:
Q  157 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgaga-cccca 255  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || | ||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    | ||||||||||| |||||||| |||||||  || |||||  |||||||  ||||||| || ||||||||||||||||||||||||| |||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagac 24253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 256 - 350
Target Start/End: Original strand, 17136465 - 17136559
Alignment:
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagac 17136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 6109969 - 6110028
Alignment:
Q  55 tgttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109969 tgttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 13248514 - 13248571
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248514 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 13211210 - 13211267
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211210 ttgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 17200492 - 17200427
Alignment:
Q  49 ggaagatgttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200492 ggaagatattgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 15607731 - 15607672
Alignment:
Q  56 gttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607731 gttgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4107544 - 4107590
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4107544 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 4107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4111396 - 4111442
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4111396 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 4111442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 7109660 - 7109614
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7109660 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 7109614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 7113595 - 7113549
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7113595 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 7113549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 10579653 - 10579603
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 11070030 - 11069984
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11070030 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 11069984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 11165676 - 11165722
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11165676 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 11165722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 22321626 - 22321580
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22321626 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 22321580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 22336681 - 22336635
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22336681 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 22336635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 27409791 - 27409837
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27409791 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 27409837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 28949686 - 28949640
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28949686 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 28949640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 55022829 - 55022783
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  55022829 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 55022783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 11300577 - 11300622
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11300577 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 11300622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 12339760 - 12339715
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12339760 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 12339715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 15351294 - 15351237
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351294 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 15357886 - 15357829
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357886 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 16796540 - 16796495
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16796540 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 16796495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 10572891 - 10572840
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgt 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  10572891 ttgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4588920 - 4588966
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4588920 tgttgttgattatgtgaaatatttatatgccttatgtggaagatgtt 4588966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 5223355 - 5223313
Alignment:
Q  15 tgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5223355 tgttggttatgtgaaatatttatatgccttatgtggaagatgt 5223313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 15601185 - 15601127
Alignment:
Q  57 ttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601185 ttgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 30065908 - 30065862
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30065908 tgttgttgattatgtgaaatatttatatgccttatgtggaagatgtt 30065862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 324289 - 324244
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  324289 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 324244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 12469955 - 12469910
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12469955 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 12469910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 13516718 - 13516775
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516718 ttgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 14670977 - 14670932
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14670977 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 14670932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15465129 - 15465084
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  15465129 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 15465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15964931 - 15964886
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15964931 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 15964886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15968855 - 15968810
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15968855 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 15968810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15972779 - 15972734
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15972779 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 15972734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 16643226 - 16643181
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  16643226 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 16643181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 17691774 - 17691819
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17691774 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 17691819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 17781415 - 17781358
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781415 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 19090042 - 19089985
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090042 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 37439783 - 37439828
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  37439783 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 37439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 52989788 - 52989833
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  52989788 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 52989833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 54876456 - 54876501
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  54876456 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 54876501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 14682476 - 14682436
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14682476 tgttgttggttatgtgaaatatttatatgccttatgtggaa 14682436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 14966223 - 14966183
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14966223 tgttgttggttatgtgaaatatttatatgccttatgtggaa 14966183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 15617333 - 15617290
Alignment:
Q  15 tgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  15617333 tgttgattatgtgaaatatttatatgccttatgtggaagatgtt 15617290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 19775725 - 19775682
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  19775725 ttgttggttatgtgaaatatttatatgacttatgtggaagatgt 19775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 21837476 - 21837434
Alignment:
Q  15 tgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  21837476 tgttggttatgtgaaatatttatatgccttatgtggaaaatgt 21837434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 18510828 - 18510885
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510828 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 18522569 - 18522626
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522569 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 18534662 - 18534719
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534662 ttgttgtagtaagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 35961596 - 35961641
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  35961596 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 35961641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 43889692 - 43889737
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  43889692 tgttgttggttatgtgaaatatttatatgccttatgtagaaaatgt 43889737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 14499287 - 14499241
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  14499287 tgttgtgggttatgtaaaatattaatatgccttatgtggaagatgtt 14499241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 18700373 - 18700411
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtgg 50  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18700373 tgttgttggttatgtgaaataattatatgccttatgtgg 18700411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 41871 - 41826
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  41871 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 41826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11854695 - 11854650
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||    
T  11854695 tgttgttggttatgtgaaatgtttatatgtcttatgaggaagatgt 11854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 11914082 - 11914127
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||    
T  11914082 tgttgttggctatgtgaaatatttatatgcgttatgtggaaaatgt 11914127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 22652174 - 22652134
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  22652174 tgttgttggttatgtgaaataattatatgcattatgtggaa 22652134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 16325249 - 16325294
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  ||||||||||| |||||| ||||    
T  16325249 tgttgttggttatgtgaaataactatatgccttacgtggaaaatgt 16325294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 16979254 - 16979218
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgt 48  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  16979254 tgttgttggttatgtgaaataattatatgtcttatgt 16979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 18288 - 18488
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  350 c 350  Q
    |    
T  18488 c 18488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 29327784 - 29327984
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  350 c 350  Q
    |    
T  29327984 c 29327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 11536269 - 11536069
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  350 c 350  Q
    |    
T  11536069 c 11536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 11543187 - 11542987
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  350 c 350  Q
    |    
T  11542987 c 11542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 15152445 - 15152643
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15152643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 15148144 - 15148342
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15148342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 18561009 - 18561207
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagac 18561207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 152 - 342
Target Start/End: Original strand, 12750828 - 12751018
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    | | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgt 12751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 156 - 350
Target Start/End: Original strand, 12738542 - 12738736
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 152 - 342
Target Start/End: Complemental strand, 18258047 - 18257857
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  ||||  |||| || ||| ||||| ||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgt 18257857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 338
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | ||||||   |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactatt 338  Q
    |||||   ||||| | |||||| ||||||||  ||||||| |||||||| |||  | |||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 342
Target Start/End: Original strand, 2364917 - 2365086
Alignment:
Q  172 ttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 271  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  272 tattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    |||||| ||| ||| ||||||||| | |||||| ||| ||||||| ||||||| |||||||||||| ||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgt 2365086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  183 caaaataataaagtccctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 281  Q
    |||||||| || ||| |||||||||||||| ||||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  282 gtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
      ||  |||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 11543280 - 11543223
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543280 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 340
Target Start/End: Original strand, 39111819 - 39112002
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||| ||||||| |||||||||||  |||||||    ||||  |     
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaatcacaagacatct 39111917  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattat 340  Q
    ||||||||||||| ||||||   ||| ||| |  |||| |||||||||| |||  || ||| |||||||  ||||||||||||||    
T  39111918 ttaaacataaggacactatttcaaaaatattcacagtccagctttattgtgaaacgaaataacattaaaatatagagactattat 39112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 11536362 - 11536305
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536362 ttgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 12750732 - 12750789
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750732 ttgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 15152349 - 15152406
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152349 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 29327689 - 29327745
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327689 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33066 - 33020
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33066 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 33020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 70912 - 70958
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  70912 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 70958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 75021 - 75067
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  75021 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 75067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 12704806 - 12704852
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12704806 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 12704852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 12714823 - 12714777
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12714823 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 12714777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 12718627 - 12718581
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12718627 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 12718581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 12723538 - 12723492
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12723538 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 12723492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 16907348 - 16907394
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16907348 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 16907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 18279362 - 18279316
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18279362 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 18279316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 18283325 - 18283279
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18283325 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 18283279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 26292354 - 26292308
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26292354 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 26292308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 16114200 - 16114154
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16114200 tgttgttgattatgtgaaatatttatatgccttatgtggaagatgtt 16114154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 16117353 - 16117307
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16117353 tgttgttgattatgtgaaatatttatatgccttatgtggaagatgtt 16117307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1858897 - 1858942
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1858897 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 1858942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 14258505 - 14258460
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14258505 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 14258460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 25927314 - 25927359
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  25927314 tgttgttggttatgtgaaatatttatatgtcttatgtggaagatgt 25927359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 39722225 - 39722180
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  39722225 tgttgttggttatgtgaaatacttatatgccttatgtggaagatgt 39722180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 45170153 - 45170198
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  45170153 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 45170198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 46580741 - 46580786
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  46580741 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 46580786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 13392029 - 13392085
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 113  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392029 ttgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  224 aacattaagtataacttaattgtgagaccccattaaacataagg 267  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 8940304 - 8940259
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  8940304 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 8940259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13918591 - 13918636
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  13918591 tgttgttggttatgtgaaatatttatatgccttatatggaaaatgt 13918636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 14273569 - 14273524
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  14273569 tgttgttggttatgtgaaatatttatataccttatgtggaaaatgt 14273524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 15720050 - 15720013
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15720050 tgttgttggttatgtgaaatatttatatgccttatgtg 15720013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 16460831 - 16460876
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  16460831 tgttgttagttatgtgaaatatttatatgccttatgtggaaaatgt 16460876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 17060490 - 17060535
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  17060490 tgttgttggttatgtgaaatatttatattccttatgtggaaaatgt 17060535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 20487596 - 20487551
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  20487596 tgttgttggttatgtgaaatatttatatggcttatgtggaaaatgt 20487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 32301342 - 32301297
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  32301342 tgttgttggttatgtgaaatatttatacgccttatgtggaaaatgt 32301297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 16550712 - 16550752
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  16550712 tgttgttggttatgtgaaataattatatgccttatgtggaa 16550752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 16614950 - 16614910
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  16614950 tgttgttggttatgtgaaataattatatgccttatgtggaa 16614910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 16998647 - 16998611
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgt 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  16998647 tgttgttggttatgtgaaatatttatatgccttatgt 16998611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 32160910 - 32160950
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  32160910 tgttgttggttatgtgaaataattatatgccttatgtggaa 32160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 2530202 - 2530246
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  2530202 tgttgttggttatgtgaaata-ttatatgccttatgtggaaaatgt 2530246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  200 tagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataa 265  Q
    ||||||||||||||| ||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 16579813 - 16579776
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  16579813 tgttgttggttatgtgaaatatttatacgccttatgtg 16579776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 16585850 - 16585887
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  16585850 tgttgttggttatgtgaaatatttatacgccttatgtg 16585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  150 acaaggcatttctttattgattttgttttgttt 182  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||| | || |||||||| ||||||||| ||||||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 8468772 - 8468733
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtgga 51  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  8468772 tgttgttggttatgtgaaatgttcatatgccttatgtgga 8468733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 17232973 - 17232934
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtgga 51  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  17232973 tgttgttggttatgtgaaatgttcatatgccttatgtgga 17232934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15112998 - 15112953
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||| || ||||||||||||| ||| ||||    
T  15112998 tgttgttggttatgtgaaatgttcatatgccttatgtagaaaatgt 15112953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 7141 - 6941
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  350 c 350  Q
    |    
T  6941 c 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 14157 - 13957
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  350 c 350  Q
    |    
T  13957 c 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 7234 - 7177
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7234 ttgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 21940665 - 21940865
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  350 c 350  Q
    |    
T  21940865 c 21940865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 22171491 - 22171687
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagac 22171687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 156 - 350
Target Start/End: Original strand, 24642655 - 24642849
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagac 24642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 28554885 - 28555083
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 28555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 156 - 349
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  256 ttaaacataaggaaactattctcaaagt 283  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 22171395 - 22171452
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171395 ttgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 24642555 - 24642608
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24642555 ttgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 350
Target Start/End: Complemental strand, 38232570 - 38232384
Alignment:
Q  162 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 261  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||  ||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  262 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
     |||  | | |||||| |||||||  |||||||| ||||||||  ||||||||||   |||||||||| | |||||| ||| |||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagac 38232384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 171 - 325
Target Start/End: Original strand, 2375027 - 2375179
Alignment:
Q  171 tttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaa 270  Q
    |||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||| |  || |||||||  ||| | ||||||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  271 ctattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaag 325  Q
     |||| | |||||||  ||||||| | ||||||| | ||||||||| ||||||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcg-agtgagataacattaaag 2375179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 19278430 - 19278476
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19278430 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 19278476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 21972732 - 21972778
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21972732 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 21972778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 21976817 - 21976863
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21976817 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 21976863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 22111890 - 22111844
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22111890 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 22111844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 341
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  180 tttcaaaataataaagtccctagaatagttagtccattta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 278  Q
    ||||||||||||||||||| || |||||||  |||||||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  279 aaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatg 341  Q
    ||| |||  ||||| ||| ||||||| |||||| |||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 43251772 - 43251726
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43251772 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 43251726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 28554790 - 28554847
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554790 ttgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 17461118 - 17461163
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17461118 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 17461163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 18833617 - 18833572
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18833617 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 18833572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 18862792 - 18862837
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  18862792 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 18862837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 21828161 - 21828206
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21828161 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 21828206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 23659462 - 23659417
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23659462 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 23659417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 23914092 - 23914047
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23914092 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 23914047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 22238085 - 22238125
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22238085 tgttgttggttatgtgaaatatttatatgccttatgtggaa 22238125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 16402068 - 16402113
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  16402068 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 16402113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 19880172 - 19880127
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19880172 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 19880127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 21410909 - 21410864
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  21410909 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 21410864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 21805401 - 21805356
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  21805401 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 21805356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 23409850 - 23409810
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  23409850 tgttgttggttatgtgaaatatttatataccttatgtggaa 23409810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 37515760 - 37515720
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  37515760 tgttgttggttatgtgaaatatttatgtgccttatgtggaa 37515720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19808430 - 19808473
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  19808430 ttgttggttatgtgaaatatttatatgcctcatgtggaaaatgt 19808473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 23478422 - 23478379
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  23478422 ttgttggttatgtgaaataattatatgccttatgtggaaaatgt 23478379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 8414418 - 8414463
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  8414418 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 8414463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11775066 - 11775021
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  11775066 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 11775021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  188 taataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||| | ||||||||| ||||||  |||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 2374946 - 2375000
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 111  Q
    |||||||||||||||||||||   ||| | |||||||||| ||||||||||||||    
T  2374946 ttgttggaataagccctaataataaatatgtattgattggatttggctttgtatc 2375000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 14397928 - 14397957
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgc 41  Q
    ||||||||||||||||||||||||||||||    
T  14397928 tgttgttggttatgtgaaatatttatatgc 14397957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 19929556 - 19929597
Alignment:
Q  12 tgttgttggttat-gtgaaatatttatatgccttatgtggaa 52  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  19929556 tgttgttgattattgtgaaatatttatatgccttatgtggaa 19929597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattg 95  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 26454054 - 26454017
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  26454054 tgttgttggttatgtgaaataattatatgtcttatgtg 26454017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 24695673 - 24695473
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  350 c 350  Q
    |    
T  24695473 c 24695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 18570070 - 18569870
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  350 c 350  Q
    |    
T  18569870 c 18569870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 152 - 350
Target Start/End: Complemental strand, 19714703 - 19714505
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| |||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19714505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 156 - 350
Target Start/End: Complemental strand, 19707419 - 19707225
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 338
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  155 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccc 254  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| ||  ||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  255 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactatt 338  Q
    |||||||  ||||| | |||||| |||||||  ||||||||||||||||| |||  | |||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 342
Target Start/End: Complemental strand, 22547217 - 22547031
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| |||||||||||  |||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
    ||||| ||| ||| | |||| | ||||||| || |||||| |||||||| ||||||||||| |||||||  ||||||||||||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgt 22547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 259
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || | ||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  250 accccattaa 259  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 335
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  154 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccc 253  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  |||||||||||||  |||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  254 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagact 335  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||||||| ||| || ||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  256 ttaa 259  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 24695766 - 24695709
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695766 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 350
Target Start/End: Complemental strand, 18807176 - 18807041
Alignment:
Q  215 atttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttattgagaagtgag 313  Q
    ||||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| |||||| ||||| ||    
T  18807176 atttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaag 18807078  T
Q  314 atatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| || |||||||||||||||||||||  |||||||    
T  18807077 ataacaataaagcatagagactattatgcgggtagac 18807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 19707520 - 19707462
Alignment:
Q  56 gttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707520 gttgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 335
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  154 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccc 253  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||  |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  254 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagact 335  Q
     | |||||  || || | |||||| ||||||| | ||||| | ||||||||  ||||| ||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 350
Target Start/End: Original strand, 39538701 - 39538788
Alignment:
Q  263 taaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    |||||| |||||||| ||| ||||| |||| ||||||||||| |||||| ||||||||||||||||  |||||||||||| |||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagac 39538788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 15236982 - 15237028
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15236982 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 15237028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 19472867 - 19472913
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19472867 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 19472913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 20295806 - 20295760
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20295806 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 20295760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 18356251 - 18356206
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18356251 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 18356206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 40723734 - 40723779
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40723734 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 40723779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 20910982 - 20911027
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20910982 tgttgttggttatgtgaaatatttatatgtcttatgtggaagatgt 20911027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 10753321 - 10753278
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  10753321 ttgttggttatgtgaaatatttatatgacttatgtggaagatgt 10753278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 18570166 - 18570108
Alignment:
Q  56 gttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||| || ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570166 gttgttcgagtaagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 17011069 - 17011024
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  17011069 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 17011024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22107500 - 22107545
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  22107500 tgttgttggttatgtcaaatatttatatgccttatgtggaaaatgt 22107545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 29448058 - 29448018
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  29448058 tgttgttggttatgtgaaataattatatgccttatgtggaa 29448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 113  Q
    ||||||| |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  176 tttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataag 266  Q
    ||||||||||||||||||||||| || ||||||||| |   |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 263201 - 263156
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||    
T  263201 tgttgttggttatgtgaaataattatgtgccttatgtggaaaatgt 263156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 6765883 - 6765838
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||    
T  6765883 tgttgttggttgtgtgaaatgtttatatgccttatgtggaaaatgt 6765838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 33473272 - 33473317
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  33473272 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 33473317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 33895711 - 33895756
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||||    
T  33895711 tgttgtgggttttgtgaaatatttatatgccttatgtggaaaatgt 33895756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 20910863 - 20910897
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttat 46  Q
    |||||||| ||||||||||||||||||||||||||    
T  20910863 tgttgttgattatgtgaaatatttatatgccttat 20910897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 346
Target Start/End: Complemental strand, 21330455 - 21330259
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 21330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 18796506 - 18796706
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  350 c 350  Q
    |    
T  18796706 c 18796706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 152 - 348
Target Start/End: Original strand, 18619807 - 18620002
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtag 348  Q
    ||||||||||| ||||| | |||||| |||||||| || ||||| |||||||| |||  | ||||  ||||||||||| |||||||||||| |||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  156 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 255  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  256 ttaaacataaggaaactattctcaaagtatccgtagtcaa 295  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 20977958 - 20978084
Alignment:
Q  216 tttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagat 315  Q
    ||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||| || ||||||||||    
T  20977958 tttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgagat 20978057  T
Q  316 atcattaaagcatagagactattatgt 342  Q
    |||| ||||||||||||||||||||||    
T  20978058 atcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 36270199 - 36270366
Alignment:
Q  184 aaaataataaagtccctagaatagttagtcca-tttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 282  Q
    |||||||||||||||||||||||||||||  | || |||| ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  283 tatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
     ||||||| |||||||||| || |||| | |||| |||||||| ||| |||||||| ||| |||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagac 36270366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 24628626 - 24628672
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24628626 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 24628672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 24649316 - 24649270
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24649316 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 24649270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 27379580 - 27379626
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27379580 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 27379626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 27383626 - 27383672
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27383626 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 27383672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 27601755 - 27601709
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27601755 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 27601709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 31345171 - 31345126
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31345171 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 31345126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 12901661 - 12901705
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12901661 ttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 12901705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 10101792 - 10101838
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  10101792 tgttgttgattatgtgaaatatttatatgccttatgtggaagatgtt 10101838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 1283348 - 1283303
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1283348 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 1283303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 9784736 - 9784691
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  9784736 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 9784691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 23069349 - 23069394
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23069349 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 23069394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 27472474 - 27472429
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27472474 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 27472429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 30345138 - 30345183
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  30345138 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 30345183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 41531151 - 41531196
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  41531151 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 41531196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  184 aaaataataaagtccctagaatagttagtccatttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 281  Q
    ||||||||||||||  |||||| |||||| | ||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  282 gtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgt 342  Q
      ||  ||| |||||||||| |  |||||| ||||||||||||||| | ||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22459628 - 22459673
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  22459628 tgttgtcggttatgtgaaatatttatatgccttatgtggaaaatgt 22459673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 23707354 - 23707399
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  23707354 tgttgttggttatgtgaaatatttatatgcattatgtggaaaatgt 23707399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 24681469 - 24681424
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  24681469 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 24681424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 24918165 - 24918120
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  24918165 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 24918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 34874278 - 34874315
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34874278 tgttgttggttatgtgaaatatttatatgccttatgtg 34874315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 18358799 - 18358844
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||    
T  18358799 tgttgttggttttgtgaaatgtttatatgccttatgtggaaaatgt 18358844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 19692830 - 19692773
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692830 ttgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 21081802 - 21081839
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    |||||||||||||||||||||||||||| |||||||||    
T  21081802 tgttgttggttatgtgaaatatttatataccttatgtg 21081839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 24671050 - 24671005
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||    
T  24671050 tgttgttggttatgtgaaatatttatatgggttatgtggaaaatgt 24671005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 34492200 - 34492245
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||    
T  34492200 tgttgttggttatgtgaaataattatataccttatgtggaaaatgt 34492245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 21914966 - 21914926
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  21914966 tgttgtaggttatgtgaaataattatatgccttatgtggaa 21914926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 18796411 - 18796470
Alignment:
Q  57 ttgttggaataagccctaatagccaatctata--ttgattgggtttggctttgtatcatg 114  Q
    |||||||| |||||||||| ||  ||||||||  ||||||| ||||||||||||||||||    
T  18796411 ttgttggattaagccctaacagaaaatctatatattgattgcgtttggctttgtatcatg 18796470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 7107 - 7307
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  350 c 350  Q
    |    
T  7307 c 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 7014 - 7071
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7014 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 150 - 350
Target Start/End: Complemental strand, 26197 - 25997
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  350 c 350  Q
    |    
T  25997 c 25997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 26287 - 26231
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26287 ttgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 173; Significance: 6e-93; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 150 - 350
Target Start/End: Original strand, 993 - 1193
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  250 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 349  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  350 c 350  Q
    |    
T  1193 c 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 901 - 957
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 152 - 350
Target Start/End: Original strand, 5531 - 5729
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 350  Q
    ||| ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 5435 - 5492
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5435 ttgttgaagtaagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 152 - 333
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  152 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  252 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagaga 333  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| |||||||||||||| |||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 8608 - 8546
Alignment:
Q  52 agatgttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8608 agatattgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 23826 - 23769
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23826 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 16522 - 16579
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16522 ttgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  150 acaaggcatttctttattgattttgttttgtttc 183  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4022 - 4068
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4022 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 4068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 9e-18; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 65675 - 65721
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  65675 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 65721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 80674 - 80628
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  80674 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 80628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 61759 - 61805
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||    
T  61759 tgttgttgaatatgtgaaatatttatatgccttatgtggaagatgtt 61805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 58866 - 58912
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  58866 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 98 - 41
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  98 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 907 - 862
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  907 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 17628 - 17583
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17628 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 17583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 39307 - 39262
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39307 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 39262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 207649 - 207694
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  207649 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 207694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 12379 - 12335
Alignment:
Q  14 ttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12379 ttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 12335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 5251 - 5294
Alignment:
Q  15 tgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5251 tgttggttatgtgaaatatttatatgccttatgtggaagatgtt 5294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 409 - 363
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  409 tgttgttggttatgtgaaatatttatatgccttatgtgaaagatgtt 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 2779 - 2824
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2779 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 2824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 7889 - 7844
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  7889 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 7844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 36089 - 36134
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  36089 tgttgttggttatgtgaaatacttatatgccttatgtggaagatgt 36134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 15480 - 15525
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  15480 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 15525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 10155 - 10195
Alignment:
Q  17 ttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  10155 ttggttatgtgaaatgtttatatgccttatgtggaaaatgt 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 21221 - 21176
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21221 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 21176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 31178 - 31133
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31178 tgttgttagttatgtgaaatatttatatgccttatgtggaagatgt 31133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 80482 - 80527
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  80482 tgttgttggttatatgaaatatttatatgccttatgtggaagatgt 80527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 36233 - 36278
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36233 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 36278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 169815 - 169860
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  169815 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 169860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1231 - 1276
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1231 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 7982 - 8027
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  7982 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 8027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 189524 - 189569
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  189524 tgttgttggttatgtgaaatatttatatgacttatgtggaagatgt 189569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 126010 - 125965
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  126010 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 125965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 71356 - 71311
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  71356 tgttgttggttatgtgaaatatttatatgccttatgtggaaaatgt 71311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 14234 - 14277
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagat 55  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  14234 tgttgttggttatgtgaaatatttatatgacttatgtggaagat 14277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  60 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 114  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 200
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  169 attttgttttgtttcaaaataataaagtccct 200  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 67449 - 67494
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgtt 58  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  67449 tgttgttggttatgt-aaatatttatatgccttatgtggaagatgtt 67494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 614 - 569
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  614 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 10564 - 10519
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  10564 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 10519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 7007 - 7052
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||    
T  7007 tgttgttggttatgtgaaatatgtatatgccttatgtggaaaatgt 7052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 354 - 309
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  354 tgttgttggttatgtgaaatatttatatgacttatgtgaaagatgt 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 20276 - 20321
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  20276 tgttgttggttatgtgaaatatttatataacttatgtggaagatgt 20321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 214 - 169
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  214 tgttgttggttatgtgaaatatttatatgccttaggtggaaaatgt 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 11648 - 11693
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  11648 tgttgttggttatgtgaaatatttatatgacttatgtgaaagatgt 11693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 32807 - 32852
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  32807 tgttgttggttatgtgaaatatttatatgacttatgtgaaagatgt 32852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 33261 - 33216
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33261 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgt 33216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 592 - 555
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  592 tgttgttggttatgtgaaatatttatatgccttatgtg 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 120063 - 120026
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtg 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  120063 tgttgttggttatgtgaaatatttatatgccttatgtg 120026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 53904 - 53949
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  53904 tgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgt 53949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 472 - 432
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  472 tgttgttggttatgtgaaataattatatgccttatgtggaa 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  58 tgttggaataagccctaatagccaatctatattgatt 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 6225 - 6265
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  6225 tgttgttggttatgtgaaatatttatatggcttatgtggaa 6265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 20805 - 20769
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgt 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  20805 tgttgttggttatgtgaaatatttatatgccttatgt 20769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 15056 - 15017
Alignment:
Q  8 ttggtgttgttggttatgtgaaatatttatatgccttatg 47  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  15056 ttggtgttgttggttatgtgaaatatttatatgcgttatg 15017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 4330 - 4380
Alignment:
Q  7 tttggtgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||| |||||||||||||||||||||||||||| | |||||||||| ||||    
T  4330 tttgctgttgttggttatgtgaaatatttatatacgttatgtggaaaatgt 4380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 3393 - 3438
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||    
T  3393 tgttgttggttatgtgaaatatttatatgaattatgtggaaaatgt 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1358 - 1403
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||    
T  1358 tgttgttggctatgtgaaatatttatatgcgttatgtggaaaatgt 1403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 6968 - 7013
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  6968 tgttgttggttatgtgaaatttttatatgcgttatgtggaaaatgt 7013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 5877 - 5930
Alignment:
Q  57 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 110  Q
    |||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||    
T  5877 ttgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1940 - 1985
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||    
T  1940 tgttattggttatgtgaaatatttatatgtcttatgtggaaaatgt 1985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 24663 - 24708
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  24663 tgttgatggttatgtgaaatatttatatgccttatctggaaaatgt 24708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 5802 - 5757
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  5802 tgttgttggttatgtgaaataattatatgtcttatgtggaaaatgt 5757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 176136 - 176091
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  176136 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgt 176091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 168782 - 168737
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||| ||||||||||||  |||||||||||||||||| ||||    
T  168782 tgttgttgcttatgtgaaataactatatgccttatgtggaaaatgt 168737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 70536 - 70576
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  70536 tgttcttggttatgtgaaataattatatgccttatgtggaa 70576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 36096 - 36135
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtgga 51  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  36096 tgttgttggttatgtgaaatgttcatatgccttatgtgga 36135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22477 - 22522
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||||| |||||||||||| ||||||| ||||||||||| ||||    
T  22477 tgttgttgattatgtgaaataattatatgtcttatgtggaaaatgt 22522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  179 gtttcaaaataataaagtccctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagac 251  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 67316 - 67288
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatg 40  Q
    |||||||||||||||||||||||||||||    
T  67316 tgttgttggttatgtgaaatatttatatg 67288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 105135 - 105090
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaagatgt 57  Q
    |||||| ||||||| |||||| ||||||||||||||||||| ||||    
T  105135 tgttgtcggttatgcgaaataattatatgccttatgtggaaaatgt 105090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 15625 - 15597
Alignment:
Q  24 tgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||    
T  15625 tgtgaaatatttatatgccttatgtggaa 15597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 57011 - 56983
Alignment:
Q  24 tgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||    
T  57011 tgtgaaatatttatatgccttatgtggaa 56983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 85600 - 85560
Alignment:
Q  12 tgttgttggttatgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||| || | |||||||||||||||    
T  85600 tgttgttggttatgtgaaatgttcagatgccttatgtggaa 85560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 166426 - 166454
Alignment:
Q  24 tgtgaaatatttatatgccttatgtggaa 52  Q
    |||||||||||||||||||||||||||||    
T  166426 tgtgaaatatttatatgccttatgtggaa 166454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University