View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5370_high_1 (Length: 263)
Name: NF5370_high_1
Description: NF5370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5370_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 10478946 - 10479168
Alignment:
| Q |
23 |
cagagatattcacacaaagatattattttgagagctacttttatcccacatataattttctaagaatcacaatcatttaaaaatatacaatctttcaaat |
122 |
Q |
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| T |
10478946 |
cagagatattcacacaaagatatcattttaagagctacttttatcccacatataattttctaagaatcacaatcatttaaaaatacacaatcttttgaat |
10479045 |
T |
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| Q |
123 |
tcgactccaaacatgaatatgcaacaacattaaaactcgtaagaagaatgatcttattacatcaaaaagaaaataggcaacgttatgtccgaatgtatcc |
222 |
Q |
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| T |
10479046 |
tcgaccccaaacattaatatgcaacaacattaaaacttgtaggaagaatgatcttattacatcaaaaagaaaataggcaacgttatgtctgaatttatcc |
10479145 |
T |
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| Q |
223 |
atctagaaggcaatggtcttatt |
245 |
Q |
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| T |
10479146 |
atctagaaggcaatggtcttatt |
10479168 |
T |
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