View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5371-Insertion-1 (Length: 382)
Name: NF5371-Insertion-1
Description: NF5371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5371-Insertion-1 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 7 - 381
Target Start/End: Original strand, 8522223 - 8522603
Alignment:
| Q |
7 |
aaaatcaaactagcaagatcaaaagagtcaagcttgttttaacagaaagtaaaaacccaacagacaaaagagaaaataattacaacaataaaactacgac |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
8522223 |
aaaatcaaactagcaagatcaaaagagtcaagcttgttttaacagaaagtaaaaacccaacagacaaaagagaaaataattacaacaacaaaactacgac |
8522322 |
T |
 |
| Q |
107 |
atttgcaccatctaattc------tgattcgtgattgaactatggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaata |
200 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8522323 |
atttgcaccatctgattctgattctgattcgtgattgaactttggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaata |
8522422 |
T |
 |
| Q |
201 |
tcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactggtttcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8522423 |
tcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccaatcacaaatccacatccgtatccaattgccactggtttcca |
8522522 |
T |
 |
| Q |
301 |
tccaaatccaaatttctcctcaccgcaaaagttgttggctgaaggtgcagaatgttgttcaggttcacacatttttgacaa |
381 |
Q |
| |
|
||||||| |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8522523 |
tccaaattcaaacttctcttcactgcaaaagttgttggctgaaggtgcagaatgttgttcaggtccacacatttttgacaa |
8522603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 47 - 381
Target Start/End: Original strand, 42122646 - 42122980
Alignment:
| Q |
47 |
aacagaaagtaaaaacccaacagacaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgtgattgaactatggt |
146 |
Q |
| |
|
||||||||||||||| |||||| |||| ||| ||| ||| |||||||||||||||| |||||||||||||||| |||||||||| || |||||| ||| |
|
|
| T |
42122646 |
aacagaaagtaaaaaaccaacacacaacagataaagtaactacaacaataaaactatgacatttgcaccatctgattctgattcatggttgaaccatgtg |
42122745 |
T |
 |
| Q |
147 |
tcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatcc |
246 |
Q |
| |
|
|||| ||| |||||| || ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42122746 |
ccctcctcactcttgttctccttgtcactcttctcttaggcggaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatcc |
42122845 |
T |
 |
| Q |
247 |
aatgcctattccgatcacaaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaagttgttggctgaaggt |
346 |
Q |
| |
|
||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| |||| |||||||||||| |
|
|
| T |
42122846 |
aatgcatattccaatcacaaatccacatccatatccaatcgccactggtttccatccaaatctaaatttctcttcactccaagagttcttggctgaaggt |
42122945 |
T |
 |
| Q |
347 |
gcagaatgttgttcaggttcacacatttttgacaa |
381 |
Q |
| |
|
| |||||||||||||||| |||| |||||||||| |
|
|
| T |
42122946 |
ggagaatgttgttcaggtccacatttttttgacaa |
42122980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 50 - 381
Target Start/End: Original strand, 42116886 - 42117232
Alignment:
| Q |
50 |
agaaagtaaaaacccaacagacaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcg------------tgattg |
137 |
Q |
| |
|
|||||||||||| | |||| |||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| || ||| |
|
|
| T |
42116886 |
agaaagtaaaaaactaacacacaatagagaaaataacaacaacaataaaactatgacatttgcaccatctgattctgattctgattctgattcatggttg |
42116985 |
T |
 |
| Q |
138 |
aactatggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacat |
237 |
Q |
| |
|
|| ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
42116986 |
taccatggttccttctcattcttgttcttcttttcactcttctcttaggctgaccaccaaatatcatcacaatccatctaggctttccaattaaaaacat |
42117085 |
T |
 |
| Q |
238 |
ataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaa---gttg |
334 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||| |
|
|
| T |
42117086 |
aaaatatccaatgcctattccaatcacaaatccacatccatatccaattgccactgctttccatccaaatccaaatttctcttcactgcaaaagctgttg |
42117185 |
T |
 |
| Q |
335 |
ttggctgaaggtgcagaatgttgttcaggttcacacatttttgacaa |
381 |
Q |
| |
|
||||||||| || |||||| ||||||||| |||| || |||||||| |
|
|
| T |
42117186 |
ttggctgaaattggagaatgatgttcaggtccacaaatctttgacaa |
42117232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 50 - 337
Target Start/End: Original strand, 42128044 - 42128331
Alignment:
| Q |
50 |
agaaagtaaaaacccaacagacaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgtgattgaactatggttcc |
149 |
Q |
| |
|
|||||||||||| | || | |||| ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| || |||||| ||| || |
|
|
| T |
42128044 |
agaaagtaaaaaactaatacacaatagagaaaataactagaacaataaaactatgacatttgcaccatctgattctgattcatggttgaaccatgtgccc |
42128143 |
T |
 |
| Q |
150 |
tcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaat |
249 |
Q |
| |
|
|| ||| |||||| || ||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
42128144 |
tcctcactcttgttctccttgtcactcttctcttaggctgaccaccaaatatcataacaagccatctagacttttcaattaaaaacatataatatccaat |
42128243 |
T |
 |
| Q |
250 |
gcctattccgatcacaaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaagttgttg |
337 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| |||||||| |
|
|
| T |
42128244 |
gcctattccaatcacaaatccacatccatatccaatcgccactggtttccatccaaatctaaatttctcttcactccaagagttgttg |
42128331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 65 - 369
Target Start/End: Complemental strand, 34241466 - 34241168
Alignment:
| Q |
65 |
aacagacaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgtgattgaactatggttcctcgtcattcttgtcc |
164 |
Q |
| |
|
|||| |||| ||||||||||| | || |||||||||| |||||||||||||||| ||||| || ||| || || ||| ||| ||| | ||| | |
|
|
| T |
34241466 |
aacacacaatagagaaaataaccagaataataaaactatgacatttgcaccatct------gattcatggttggaccattgtttctcctcacttatgttc |
34241373 |
T |
 |
| Q |
165 |
ttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcac |
264 |
Q |
| |
|
| || |||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| | ||| |
|
|
| T |
34241372 |
tcctattcactcttctcttaggatgaccaccaaatatcatcacaaaccatctaggctttccaattaaaaacatataatatccaaggcctattccaaacac |
34241273 |
T |
 |
| Q |
265 |
aaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaagttgttggctgaaggtgcagaatgttgttcaggt |
364 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
34241272 |
aaatccacatccataaccaattgccactggtttccatccaaagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggt |
34241173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 70 - 369
Target Start/End: Complemental strand, 34233688 - 34233395
Alignment:
| Q |
70 |
acaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgtgattgaactatggttcctcgtcattcttgtccttctt |
169 |
Q |
| |
|
|||| ||||||||||| | || |||||||||| |||||||||||||||| ||||| || ||| || || ||| ||| ||| | ||| || || |
|
|
| T |
34233688 |
acaatagagaaaataaccagaataataaaactatgacatttgcaccatct------gattcatggttggaccattgtttctcctcacttatgttctccta |
34233595 |
T |
 |
| Q |
170 |
ttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatc |
269 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
34233594 |
ttcactcttctcttaggatgaccaccaaatatcatcacaaaccatctaggctttccaattaaaaacatataatatccaaggcctattccaaacacaaatc |
34233495 |
T |
 |
| Q |
270 |
cacatccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaagttgttggctgaaggtgcagaatgttgttcaggttcaca |
369 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
34233494 |
cacatccataaccaattgccactggtttccatccaaagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccaca |
34233395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 95 - 318
Target Start/End: Complemental strand, 41714393 - 41714176
Alignment:
| Q |
95 |
taaaactacgacatttgcaccatctaattctgattcgtgattgaactatggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccac |
194 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || |||||| || | ||||| |||||||||| || | | ||||| | |||||||||||||||| |
|
|
| T |
41714393 |
taaaactacgacatttgcaccat-----tc-gattcatggttgaaccattggtcctcctcattcttgttctccctgtcactattctcttaggctgaccac |
41714300 |
T |
 |
| Q |
195 |
caaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactgg |
294 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
41714299 |
caaatatcatgacaagccatctaggctttccgatcaaaaacatgtaatacccaatgcctattccaatcacaaatccacatccatatccaattgccactgc |
41714200 |
T |
 |
| Q |
295 |
tttccatccaaatccaaatttctc |
318 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
41714199 |
tttccatccaaatccaaatttctc |
41714176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 41618448 - 41618260
Alignment:
| Q |
181 |
cttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatccacatccgtat |
280 |
Q |
| |
|
|||||| ||||| |||| ||||| |||||||||||||||||||||||||| |||| | || |||||| ||||||||| || || | ||||||||| ||| |
|
|
| T |
41618448 |
cttaggttgacctccaaccatcatcacaagccatctaggctttccaattaacaacacaaaacatccaaggcctattccaataaccattccacatccatat |
41618349 |
T |
 |
| Q |
281 |
ccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaagttgttggctgaaggtgcagaatgttgttcaggttcaca |
369 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||| || | | | ||||||||||||||||||||| |
|
|
| T |
41618348 |
ccaatagccactggtttccatccaaatccaaatttctcttcactccaaaggttgttgggtggaagcggagaatgttgttcaggttcaca |
41618260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 74 - 369
Target Start/End: Complemental strand, 41572910 - 41572621
Alignment:
| Q |
74 |
aagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgtgattgaactatggttcctcgtcattcttgtccttcttttca |
173 |
Q |
| |
|
||||||||||||| | ||||||||||||| |||| ||||||||||| |||| || |||| | ||| | ||| ||| |||| |||| ||| | | |
|
|
| T |
41572910 |
aagagaaaataatcagaacaataaaactatcacatctgcaccatcta------attcatggttgagccatgaattctcctcactcttatcctccttgtaa |
41572817 |
T |
 |
| Q |
174 |
ctctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatccaca |
273 |
Q |
| |
|
|||| |||||| ||||| |||| ||||| |||||||||||||||||||| |||| |||| | || |||||| ||||||||| || || | |||||| |
|
|
| T |
41572816 |
ctctttgcttaggttgacctccaaccatcatcacaagccatctaggctttccggttaacaacacaaaacatccaaggcctattccaataaccattccaca |
41572717 |
T |
 |
| Q |
274 |
tccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaagttgttggctgaaggtgcagaatgttgttcaggttcaca |
369 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||| || | | | ||||||||||||||||||||| |
|
|
| T |
41572716 |
tccatatccaatagccactggtttccatccaaatccaaatttctcttcactccaaaggttgttgggtggaagcggagaatgttgttcaggttcaca |
41572621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 34 - 369
Target Start/End: Original strand, 11117289 - 11117631
Alignment:
| Q |
34 |
tcaagcttgttttaa-cagaaagtaaaaacccaacagacaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgt |
132 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||| ||| |||||| ||| ||| |||||||||||| |||||||||||||||| |||||||||| | |
|
|
| T |
11117289 |
tcaagcttattttaaacagaaagtaaaaaaccaacacccaacggagaaagtaactacgacaataaaactatgacatttgcaccatctgattctgattcat |
11117388 |
T |
 |
| Q |
133 |
gattgaactatggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaa |
232 |
Q |
| |
|
| |||||| ||| ||| ||| |||||| || ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11117389 |
gtttgaaccatgtgcgctcctcactcttgttctccttgtcactcttctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaa |
11117488 |
T |
 |
| Q |
233 |
aacatataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcctca--cc----gc |
326 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||| || | |
|
|
| T |
11117489 |
aacatataatatccaatgcttattccaatcacaaatccacatgcatatccaattgccactgctttccatccaaatccaaatttctcttcattccaagagg |
11117588 |
T |
 |
| Q |
327 |
aaaagttgttggctgaaggtgcagaatgttgttcaggttcaca |
369 |
Q |
| |
|
|| |||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
11117589 |
aagagttgttggctgaaggtggagaatgttgttcaggtccaca |
11117631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 121 - 381
Target Start/End: Complemental strand, 11995254 - 11994991
Alignment:
| Q |
121 |
attctgattcgtgattgaactatggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggc |
220 |
Q |
| |
|
|||||||||| || ||| || ||||||||| ||| |||||| || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11995254 |
attctgattcatggttgcaccatggttcctactcactcttgttctccttttcactcttcttttaggctgaccaccaaatatcatcacaagccatctaggc |
11995155 |
T |
 |
| Q |
221 |
tttccaattaaaaacatataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcct |
320 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
11995154 |
tttccaattaaaaacatacaatatccgaggcctattccaatcacaaatccacatccatatccaattgccactggtttccatccaaatccaaatttctctt |
11995055 |
T |
 |
| Q |
321 |
caccgcaaaa---gttgttggctgaaggtgcagaatgttgttcaggttcacacatttttgacaa |
381 |
Q |
| |
|
||| |||| |||||||| |||||||| |||| ||||||||||| | ||| | |||||||| |
|
|
| T |
11995054 |
cactcgaaaagctgttgttgggtgaaggtggagaacgttgttcaggtccgcacttctttgacaa |
11994991 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 99 - 316
Target Start/End: Original strand, 12247654 - 12247871
Alignment:
| Q |
99 |
actacgacatttgcaccatctaattctgattcgtgattgaactatggttcctcgtcattcttgtccttcttttcactctcctcttaggctgaccaccaaa |
198 |
Q |
| |
|
||||||||||| |||||| | |||||||||| || ||| || ||||||||| ||| |||||| || ||||||||||| || ||||||||||||||||| |
|
|
| T |
12247654 |
actacgacattgccaccatttgattctgattcatggttgcaccatggttcctactcactcttgttctccttttcactcttcttttaggctgaccaccaaa |
12247753 |
T |
 |
| Q |
199 |
tatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactggtttc |
298 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
12247754 |
tatcatcacaagccatctaggctttccaattaaaaacatacaatatccgaggcctattccaatcacaaatccacatccatatccaattgccaccggtttc |
12247853 |
T |
 |
| Q |
299 |
catccaaatccaaatttc |
316 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
12247854 |
catccaaatccaaatttc |
12247871 |
T |
 |
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Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 32682497 - 32682381
Alignment:
| Q |
168 |
ttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaa |
267 |
Q |
| |
|
|||||||||| |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
32682497 |
ttttcactcttctcttaggatgaccaccaattatcatcacaagccatctaggctttccaattaaaaacataaagtatccaatgcctattccaatcacaaa |
32682398 |
T |
 |
| Q |
268 |
tccacatccgtatccaa |
284 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
32682397 |
tccacatccatatccaa |
32682381 |
T |
 |
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Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 9423506 - 9423388
Alignment:
| Q |
200 |
atcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatcacaaatccacatccgtatccaattgccactggtttcc |
299 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| | |||| || |||||| |||| |||| | ||| | ||||||||| |||||||||||||||| ||||| |
|
|
| T |
9423506 |
atcatcacaggccatctaggctttccaattaacagcatacaacatccaaggccttttccaagcaccattccacatccatatccaattgccactgatttcc |
9423407 |
T |
 |
| Q |
300 |
atccaaatccaaatttctc |
318 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
9423406 |
atccaaatccaaatttctc |
9423388 |
T |
 |
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Target: chr6 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 70 - 361
Target Start/End: Complemental strand, 25523943 - 25523644
Alignment:
| Q |
70 |
acaaaagagaaaataattacaacaataaaactacgacatttgcaccatctaattctgattcgtgattga-------actatggttcctcgtcattcttgt |
162 |
Q |
| |
|
|||||||||||||||| || ||||||||| ||| |||||||||| ||||| |||||||||| ||||| | || ||| |||||| |||||||||| |
|
|
| T |
25523943 |
acaaaagagaaaataactaaaacaataaa-ctatgacatttgcatcatctgattctgattc-tgattcatggctgtaccatgattcctcctcattcttgt |
25523846 |
T |
 |
| Q |
163 |
ccttcttttcactctcctcttaggctgaccaccaaatatcatgacaagccatctaggctttccaattaaaaacatataatatccaatgcctattccgatc |
262 |
Q |
| |
|
|||| ||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |
|
|
| T |
25523845 |
cctttttttcacctttctcttaggctgaccgccaaatatcatcacaagccatctaggctttccaactaaaaacatacaatatccaatgcctattccaatc |
25523746 |
T |
 |
| Q |
263 |
acaaatccacatccgtatccaattgccactggtttccatccaaatccaaatttctcctcaccgcaaaag---ttgttggctgaaggtgcagaatgttgtt |
359 |
Q |
| |
|
| |||||||||||| ||||||||| |||| ||| |||||||||||||||||||||| |||| |||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
25523745 |
agaaatccacatccatatccaattaccaccggtatccatccaaatccaaatttctcttcactccaaaagtttttgttgggtgaaggtggagaatgttgtt |
25523646 |
T |
 |
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