View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5371-Insertion-2 (Length: 861)

Name: NF5371-Insertion-2
Description: NF5371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5371-Insertion-2
NF5371-Insertion-2
[»] chr8 (1 HSPs)
chr8 (8-804)||(43132219-43133005)


Alignment Details
Target: chr8 (Bit Score: 689; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 689; E-Value: 0
Query Start/End: Original strand, 8 - 804
Target Start/End: Original strand, 43132219 - 43133005
Alignment:
Q  8 accatcccttccactaaccctaccattgttgaagctatcgttatctgattcgctagcttcgcgaattgaccttttccactagttcccatgtagttcactt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43132219 accatcccttccactaaccctaccattgttgaagctatcgttatctgattcgctagcttcacgaattgaccttttccactagttcccatgtagttcactt 43132318  T
Q  108 tccccaatgatgaaaacaatggggaaagttttttcacgattgattcatctcctccggcgaatattgctagggttccattcttcgcgccacggtctccgcc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43132319 tccccaatgatgaaaacaatggggaaagttttttcacgattgattcatctcctccggcgaatattgctagggttccattcttcgcgccacggtctccgcc 43132418  T
Q  208 agaaacgggagcgtcgattgagtgacagcttttaatagatgcagcgtcggcgatttcgacggcgagggaaggatctgaggttgtcatgtcaacgaggatg 307  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43132419 agaaacgggagcgtcgattgagtgacagcttttaacagatgcagcgtcggcgatttcgacggcgagggaaggatctgaggttgtcatgtcaacgaggatg 43132518  T
Q  308 ccaccggatttgagaccggcgagagcgccggtgtttgggtcgaggaggacggagcgaacgtcggaggggtaaccgacgatggagaaaacgacgtcggatt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43132519 ccaccggatttgagaccggcgagagcgccggtgtttgggtcgaggaggacggagcgaacgtcggaggggtaaccgacgatggagaaaacgacgtcagatt 43132618  T
Q  408 gagatgcgacggcgtggggggaagtagcgagggtggcgccgatgtcgaggagtggttgggctttggagggggtgcggttgaagacagtgagggtgtaacc 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43132619 gagatgcgacggcgtggggggaagtagcgagggtggcgccgatgtcgaggagtggttgggctttggagggggtgcggttgaagacagtgagggtgtaacc 43132718  T
Q  508 ggaacggatgagatgggcgcacatggattggcccattacaccggtgccgatccagcccaggcgggtgtttgatgggggttatgggctcgggaggtggcca 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  43132719 ggaacggatgagatgggcgcacatggattggcccattacaccggtgccgatccagcccaggcgggtgtttgat-ggggttatgggctc-ggaggtggcca 43132816  T
Q  608 tgaaagtggcgggtgaggaggtgggtgtgagagtggcggtagagtgaacggaaacgtaggaatgggaagtgggcatctctcttcttttatttgcccacat 707  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  43132817 tg-aagtggcgggtgaggaggtgagtgtgagagtggcggtagagtgaacggaaacgtaggaat-ggaagt-ggcatctctcttcttttatttg-ccacat 43132912  T
Q  708 tatatatctattattttcgccgcgaaaattatcctccttttgtcgtggggtgatgtttgagatccaattattgatgggggtaagagctaattttggg 804  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||| ||||| |||||||    
T  43132913 tatatatctattattttcgccgcg-aaattatcctccttttgtcgt-gggtgatgtttgagat-caaatattgat-ggggtaaaagctatttttggg 43133005  T

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