View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5377-Insertion-1 (Length: 590)
Name: NF5377-Insertion-1
Description: NF5377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5377-Insertion-1 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 567; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 567; E-Value: 0
Query Start/End: Original strand, 8 - 590
Target Start/End: Original strand, 41299779 - 41300361
Alignment:
| Q |
8 |
tacacaagtggtgagagtttccaccaaggtggcagcagtggtggagtgtcattgacgttagggttacaacaacatggtggaaatggagtcagtttggctt |
107 |
Q |
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| T |
41299779 |
tacacaagtggtgagagtttccaccaaggtggcagcagtggtggagtgtcattgacgttagggttacaacaacatggtggaaatggagttagtttggctt |
41299878 |
T |
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| Q |
108 |
tcccaccaacatcacagagtccaatgttctataccagggaccaaattgaagaaccggttcagtactctcttttggatggtgaaggaacaaatattatgcc |
207 |
Q |
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| T |
41299879 |
tcccaccaacatcacagagtccaatgttctataccagggaccaaattgaagaaccggttcagtactctcttttggatggtgaaggaacaaatattatgcc |
41299978 |
T |
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| Q |
208 |
atacgggaatctcatggggacacaattgctacatgacttggcataatacatggcaaaggttgttgaattaatgttattaattttattgaagcttcagtca |
307 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
41299979 |
atacaggaatctcatggggacacaattgctacatgacttggcataatacatggcaaaggttgttgaattaatgttattaatttgattgaagcttcagtca |
41300078 |
T |
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| Q |
308 |
aaaatattgaatcatgaaggtgcgtattcagatatcacattttaggtcatggtataaccatttatattaataggggaactgagactagtgaaattaatga |
407 |
Q |
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| T |
41300079 |
aaaatattgaatcatgaaggtgcgtattcagatatcacattttaggtcatggtataaccatttatattaataggggaactgagactagtgaaattaatga |
41300178 |
T |
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| Q |
408 |
attaaattagacagattgatacttttaaaccttaactagctagctcagtatattggtattggtatattaatatatacatgatgttgcttccattgagaag |
507 |
Q |
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| T |
41300179 |
attaaattagacagattgatacttttaaatcttaactagctagctcagtatattggtattggtatattaatatatacatgatgttgcttccattgagaag |
41300278 |
T |
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| Q |
508 |
ttacacttagataatatattgcttcaatatgttttttatcatgcctctatttctcactttgaaattaaattaaatataatatc |
590 |
Q |
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| T |
41300279 |
ttacacttagataatatattgcttcaatatgttttttatcatgcctctatttctcactttgaaattaaattaaatataatatc |
41300361 |
T |
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