View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5378_high_5 (Length: 534)

Name: NF5378_high_5
Description: NF5378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5378_high_5
NF5378_high_5
[»] chr4 (6 HSPs)
chr4 (18-526)||(33814478-33814986)
chr4 (286-348)||(11307334-11307396)
chr4 (286-348)||(47680673-47680735)
chr4 (271-317)||(38534496-38534542)
chr4 (275-348)||(20090545-20090618)
chr4 (286-314)||(47681223-47681251)
[»] chr5 (2 HSPs)
chr5 (273-345)||(28296058-28296130)
chr5 (295-367)||(27856164-27856234)
[»] chr1 (5 HSPs)
chr1 (239-391)||(11199934-11200082)
chr1 (287-349)||(26231700-26231762)
chr1 (248-367)||(38637545-38637662)
chr1 (277-367)||(11766012-11766100)
chr1 (274-313)||(48273306-48273345)
[»] chr2 (3 HSPs)
chr2 (271-350)||(14571878-14571957)
chr2 (261-359)||(8252608-8252704)
chr2 (288-348)||(19548196-19548256)
[»] chr3 (6 HSPs)
chr3 (273-359)||(43407669-43407755)
chr3 (273-338)||(54328774-54328839)
chr3 (286-348)||(40196155-40196217)
chr3 (286-348)||(43481640-43481702)
chr3 (295-348)||(43978628-43978681)
chr3 (288-348)||(23161956-23162016)
[»] chr8 (5 HSPs)
chr8 (277-336)||(42115199-42115258)
chr8 (255-360)||(5073024-5073127)
chr8 (296-361)||(11806729-11806794)
chr8 (286-367)||(5981486-5981565)
chr8 (287-327)||(12156399-12156439)
[»] chr7 (3 HSPs)
chr7 (295-348)||(11776400-11776453)
chr7 (276-348)||(33730086-33730158)
chr7 (265-308)||(33730413-33730456)
[»] scaffold0039 (1 HSPs)
scaffold0039 (286-360)||(29063-29137)


Alignment Details
Target: chr4 (Bit Score: 481; Significance: 0; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 18 - 526
Target Start/End: Original strand, 33814478 - 33814986
Alignment:
Q  18 cataagagagggagacgtctctcttcagcccaaaatcttaaaacgttacattttactcattaataaatgatatgagacttaaccatccacacttgaatcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  33814478 cataagagagggagacgtctctcttcagcccaaaatcttaaaacgttacattttattcattaataaatggtatgagaaataaccatccacacttgaatcc 33814577  T
Q  118 aaagatctctccctcaagtgtttttaacgtcctataataggatccaaaacaggatccagctcttgctcccctaccaagttgaactaggcatctgatacca 217  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33814578 aatgatctctccctcaagtgtttttaacgtcctataataggatccaaaacaggatccagctcttgctcccctaccaagttgaactagggatctgatacca 33814677  T
Q  218 cttgttggggagtctgggtaagtcgggaacaacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33814678 cttgttggggagtctgggtaagtcgggaacaacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgt 33814777  T
Q  318 attaggtatacgggtcacctctcttatatatatccaacattttatccattgacatgcgatgtgagacttgaccaacttacacttgtactcaacatgaagt 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33814778 attaggtatacgggtcacctctcttatatatatccaacattttatccattgacatgcgatgtgagacttgaccaacttacacttgtactcaacatgaagt 33814877  T
Q  418 ctctcatcccaaccatgttttctcatctcaaactcgagacgttgcttaagagatccaagtctaatttagtatattgaagtatttgaagaaagaattaggt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33814878 ctctcatcccaaccatgttttctcatctcaaactcgagacgttgcttaagagatccaaatctaatttagtatattgaagtatttgaagaaagaattaggt 33814977  T
Q  518 acctatgct 526  Q
    |||||||||    
T  33814978 acctatgct 33814986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 11307334 - 11307396
Alignment:
Q  286 agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||||||| ||||||||||||||| |||| | || ||||||||| ||| ||||||||||||||    
T  11307334 agacaccacatctccacccaaaacattaaggcatcaggtatacgtgtcccctctcttatatat 11307396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 47680735 - 47680673
Alignment:
Q  286 agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||||||| |||||||||||||||||||| | || ||||||| ||||| |||||| |||||||    
T  47680735 agacaccacatctccacccaaaaccttaaggcatcaggtatatgggtctcctctcatatatat 47680673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 38534542 - 38534496
Alignment:
Q  271 ggccacaagagagggagacaccatatctccacccaaaaccttaatgt 317  Q
    |||||||| |||||||| ||| | |||||||||||||||||||||||    
T  38534542 ggccacaaaagagggaggcactaaatctccacccaaaaccttaatgt 38534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 20090545 - 20090618
Alignment:
Q  275 acaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    ||||||| ||||||||| |  || ||| |||||||| ||||| ||||||||||   ||||||||||||||||||    
T  20090545 acaagagggggagacacgacgtcgccatccaaaaccctaatgcattaggtatataagtcacctctcttatatat 20090618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 47681251 - 47681223
Alignment:
Q  286 agacaccatatctccacccaaaaccttaa 314  Q
    |||||||||||||||||||||||||||||    
T  47681251 agacaccatatctccacccaaaaccttaa 47681223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 273 - 345
Target Start/End: Original strand, 28296058 - 28296130
Alignment:
Q  273 ccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttata 345  Q
    ||||||||||||||||||||| ||||||||||||||||||||   |||||||||| |||||||||||||||||    
T  28296058 ccacaagagagggagacaccacatctccacccaaaaccttaagagattaggtatatgggtcacctctcttata 28296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 27856234 - 27856164
Alignment:
Q  295 atctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattttatccatt 367  Q
    ||||||||||||||| |||| | |||||||||| | | ||||||||||||  ||||||||||||||| |||||    
T  27856234 atctccacccaaaactttaaggcattaggtatatgagccacctctcttat--atatccaacattttacccatt 27856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 239 - 391
Target Start/End: Complemental strand, 11200082 - 11199934
Alignment:
Q  239 gtcgggaacaacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctc 338  Q
    |||||||||||||||| | |||  || |||| | |||||| |||||||||| ||| |||||||||||||||||||| | |||||| ||| | ||||||||    
T  11200082 gtcgggaacaacaacaagtcaa--tgatccaggaccacaacagagggagacgccacatctccacccaaaaccttaaggcattaggcatatgagtcacctc 11199985  T
Q  339 tcttatatatatccaacattttatccattgacatgcgatgtgagacttgacca 391  Q
    ||||||  ||||||||||||||| | ||| | | || ||||||||||| ||||    
T  11199984 tcttat--atatccaacattttacctattcataggcaatgtgagacttaacca 11199934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 26231700 - 26231762
Alignment:
Q  287 gacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatata 349  Q
    ||||||| |||||||||||||||||||| ||| | |||||| ||||| |||||||||||||||    
T  26231700 gacaccacatctccacccaaaaccttaaggtaattggtatatgggtcccctctcttatatata 26231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 367
Target Start/End: Complemental strand, 38637662 - 38637545
Alignment:
Q  248 aacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatata 347  Q
    ||||||||| | ||||| |||| | | ||||||||||||||  ||  |||||||||||| ||||||| | ||||||||||  ||||||||| ||  ||||    
T  38637662 aacaacaggcccaaatgctccaggactacaagagagggagatgccgcatctccacccaataccttaaggcattaggtatataggtcacctcact--tata 38637565  T
Q  348 tatccaacattttatccatt 367  Q
    |  |||||||||||||||||    
T  38637564 tggccaacattttatccatt 38637545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 367
Target Start/End: Original strand, 11766012 - 11766100
Alignment:
Q  277 aagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattttatccatt 367  Q
    ||||||||||||| ||| |||||||||||||||||||| | |||||||  |  ||||| ||||||  |||| ||||||||||||| |||||    
T  11766012 aagagagggagacgccacatctccacccaaaaccttaaggcattaggttaataggtcaactctct--tataaatccaacattttacccatt 11766100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 48273345 - 48273306
Alignment:
Q  274 cacaagagagggagacaccatatctccacccaaaacctta 313  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  48273345 cacaagagagggagacgccatatctccacccaaaaactta 48273306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 14571878 - 14571957
Alignment:
Q  271 ggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatat 350  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||   | |||| |||||||||| |||||||||||||||    
T  14571878 ggccacaagagagggagaaaccacatctccaaccaaaaccttaaaccaataggaatacgggtcatctctcttatatatat 14571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 359
Target Start/End: Original strand, 8252608 - 8252704
Alignment:
Q  261 aatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattt 359  Q
    |||||||||||  || ||||||||| ||||||| ||||||| ||||||| |||| |  ||||||||||| || ||||||||||||  ||||||||||||    
T  8252608 aatgttccaagatcataagagagggcgacaccacatctccatccaaaactttaaggcgttaggtatacgagttacctctcttata--tatccaacattt 8252704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 19548256 - 19548196
Alignment:
Q  288 acaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||||| ||||||||||||||||||||   ||||| |||| ||||| ||||||||||||||    
T  19548256 acaccacatctccacccaaaaccttaagacattagatatatgggtctcctctcttatatat 19548196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 43407755 - 43407669
Alignment:
Q  273 ccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattt 359  Q
    |||||||| |||||||| ||  |||||||||||||||||||    |||||||||| | ||||||| |||||||||||||||||||||    
T  43407755 ccacaagatagggagactccggatctccacccaaaaccttacgtcattaggtatatgagtcacctttcttatatatatccaacattt 43407669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 54328774 - 54328839
Alignment:
Q  273 ccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctc 338  Q
    |||||||||| |||||||||| |||||||||||||| ||||  |  ||||||||| ||||||||||    
T  54328774 ccacaagagacggagacaccacatctccacccaaaatcttatggcgttaggtatatgggtcacctc 54328839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 40196155 - 40196217
Alignment:
Q  286 agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||| |||||||||||||||||||||||| |  | ||||||| ||||| ||||||||| ||||    
T  40196155 agactccatatctccacccaaaaccttaaggcgtcaggtatatgggtcccctctcttacatat 40196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 43481702 - 43481640
Alignment:
Q  286 agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||| ||| ||||||||| |||| ||||||| || ||||||| ||||| ||||||||||||||    
T  43481702 agacgccacatctccacctaaaatcttaatgcatcaggtatatgggtcccctctcttatatat 43481640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 43978628 - 43978681
Alignment:
Q  295 atctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||||||||||||||||||| | | |||||||| | ||| ||||||||||||||    
T  43978628 atctccacccaaaaccttaaggcaataggtatatgagtctcctctcttatatat 43978681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 23162016 - 23161956
Alignment:
Q  288 acaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||||| |||||||||||||| ||||| | ||  |||||| | ||||||||||||||||||    
T  23162016 acaccacatctccacccaaaatcttaaggcatcgggtatatgagtcacctctcttatatat 23161956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 42115258 - 42115199
Alignment:
Q  277 aagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacc 336  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| ||||| || |||||    
T  42115258 aagagagggagacaccacatctccacccaaaaccttaatgcattatgtatatggttcacc 42115199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 360
Target Start/End: Complemental strand, 5073127 - 5073024
Alignment:
Q  255 gggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaa 354  Q
    |||| ||||| |||| | |||||||||||||||||  || |||||||||||||||||||| | |||| ||||| | | | ||||||||||  ||||||||    
T  5073127 gggctaaatgctccaggaccacaagagagggagacgacacatctccacccaaaaccttaaggcattacgtatatgagacgcctctcttat--atatccaa 5073030  T
Q  355 catttt 360  Q
    ||||||    
T  5073029 catttt 5073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 11806794 - 11806729
Alignment:
Q  296 tctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacatttta 361  Q
    ||||||||||||||||||| | |  ||||||| |||||||||||||||||||||  ||||||||||    
T  11806794 tctccacccaaaaccttaaggcacaaggtatatgggtcacctctcttatatatacacaacatttta 11806729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 5981486 - 5981565
Alignment:
Q  286 agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattttatccatt 367  Q
    |||||||| || ||||||||||||||||| | || ||||| | ||||| |||||||||||  |||||||| |||| ||||||    
T  5981486 agacaccacatttccacccaaaaccttaaggcatcaggtacatgggtcccctctcttata--tatccaacgttttctccatt 5981565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 12156439 - 12156399
Alignment:
Q  287 gacaccatatctccacccaaaaccttaatgtattaggtata 327  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  12156439 gacaccacatctccaccctaaaccttaacgtattaggtata 12156399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 11776400 - 11776453
Alignment:
Q  295 atctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    |||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  11776400 atctccacccaaaaccttaaggtattatgtatatgggtcccctctcttatatat 11776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 33730086 - 33730158
Alignment:
Q  276 caagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat 348  Q
    ||||||| |||| ||||| ||||||| |||||||||||||| ||||| | || |||||||||||||| |||||    
T  33730086 caagagatggaggcaccacatctccatccaaaaccttaatgcattagctctatgggtcacctctcttttatat 33730158  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 33730413 - 33730456
Alignment:
Q  265 ttccaaggccacaagagagggagacaccatatctccacccaaaa 308  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||    
T  33730413 ttccaagaccacaagagagggagacgccacatctccacccaaaa 33730456  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 29137 - 29063
Alignment:
Q  286 agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacatttt 360  Q
    |||||||| |||||||||||||| |||||   || || |||| | ||| ||||||||||||||||||||||||||    
T  29137 agacaccacatctccacccaaaatcttaagacatcagatatatgagtcccctctcttatatatatccaacatttt 29063  T

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