View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5381_high_1 (Length: 669)

Name: NF5381_high_1
Description: NF5381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5381_high_1
NF5381_high_1
[»] chr7 (31 HSPs)
chr7 (336-641)||(2276024-2276337)
chr7 (18-238)||(2274841-2275061)
chr7 (565-627)||(7017179-7017241)
chr7 (565-627)||(7032537-7032599)
chr7 (565-641)||(11201277-11201353)
chr7 (581-641)||(49106984-49107044)
chr7 (569-635)||(10056611-10056677)
chr7 (581-641)||(12275817-12275877)
chr7 (566-629)||(26862900-26862961)
chr7 (581-628)||(3235559-3235606)
chr7 (20-79)||(27804710-27804769)
chr7 (568-641)||(46074134-46074205)
chr7 (568-629)||(49106895-49106954)
chr7 (584-629)||(18089793-18089838)
chr7 (584-641)||(26862992-26863049)
chr7 (581-641)||(40134465-40134523)
chr7 (572-641)||(2276356-2276423)
chr7 (572-629)||(3235650-3235705)
chr7 (581-627)||(5443622-5443668)
chr7 (581-627)||(5452667-5452713)
chr7 (596-641)||(7526133-7526178)
chr7 (584-641)||(24516559-24516616)
chr7 (596-629)||(29356932-29356965)
chr7 (581-626)||(31042139-31042184)
chr7 (159-234)||(21081640-21081715)
chr7 (584-627)||(26647783-26647826)
chr7 (581-634)||(10056709-10056762)
chr7 (584-629)||(12275741-12275786)
chr7 (581-621)||(316458-316498)
chr7 (158-238)||(27240805-27240885)
chr7 (581-641)||(47497779-47497839)
[»] chr6 (27 HSPs)
chr6 (336-515)||(1512026-1512203)
chr6 (18-130)||(1512237-1512349)
chr6 (26-83)||(5477351-5477408)
chr6 (576-629)||(24110148-24110201)
chr6 (568-629)||(1473686-1473748)
chr6 (584-629)||(1473618-1473663)
chr6 (581-626)||(4033086-4033131)
chr6 (584-629)||(34093903-34093948)
chr6 (581-629)||(5706710-5706758)
chr6 (20-80)||(12200404-12200464)
chr6 (584-628)||(12731557-12731601)
chr6 (590-624)||(24110072-24110106)
chr6 (584-625)||(4494397-4494438)
chr6 (581-626)||(17389991-17390036)
chr6 (49-85)||(7413996-7414032)
chr6 (584-624)||(10729959-10729999)
chr6 (590-641)||(479812-479863)
chr6 (590-629)||(28865481-28865520)
chr6 (586-641)||(31989213-31989268)
chr6 (49-83)||(7425066-7425100)
chr6 (581-627)||(9645010-9645056)
chr6 (581-627)||(9651027-9651073)
chr6 (581-627)||(12731647-12731693)
chr6 (572-641)||(3150200-3150269)
chr6 (575-627)||(6643311-6643361)
chr6 (608-641)||(11650916-11650949)
chr6 (49-85)||(7417944-7417980)
[»] chr3 (49 HSPs)
chr3 (336-515)||(1539124-1539301)
chr3 (336-515)||(54332669-54332846)
chr3 (18-123)||(22522584-22522689)
chr3 (19-130)||(1538979-1539090)
chr3 (336-515)||(22522730-22522907)
chr3 (18-130)||(6032814-6032926)
chr3 (18-130)||(54332522-54332635)
chr3 (383-515)||(6033010-6033141)
chr3 (581-641)||(3901572-3901632)
chr3 (567-641)||(3901485-3901559)
chr3 (568-629)||(11532526-11532587)
chr3 (581-641)||(36480707-36480767)
chr3 (568-628)||(40554130-40554190)
chr3 (567-627)||(799334-799394)
chr3 (581-641)||(36480786-36480846)
chr3 (577-620)||(19560729-19560772)
chr3 (564-641)||(13540161-13540236)
chr3 (20-85)||(19792278-19792343)
chr3 (588-641)||(29955045-29955098)
chr3 (588-641)||(30004199-30004252)
chr3 (572-625)||(46555587-46555640)
chr3 (580-635)||(799259-799314)
chr3 (583-629)||(799147-799193)
chr3 (571-629)||(29955129-29955187)
chr3 (571-629)||(30004283-30004341)
chr3 (590-628)||(35357326-35357364)
chr3 (596-629)||(35357408-35357441)
chr3 (590-631)||(49750611-49750652)
chr3 (585-641)||(19560633-19560689)
chr3 (581-629)||(31205369-31205417)
chr3 (583-635)||(32880999-32881051)
chr3 (581-628)||(14345151-14345198)
chr3 (580-627)||(44890430-44890477)
chr3 (594-628)||(31205461-31205495)
chr3 (590-628)||(37189236-37189274)
chr3 (568-606)||(40716007-40716045)
chr3 (575-628)||(48543474-48543525)
chr3 (571-627)||(3300715-3300769)
chr3 (569-626)||(11532423-11532480)
chr3 (588-629)||(26986300-26986341)
chr3 (587-628)||(36007447-36007488)
chr3 (584-629)||(40117817-40117862)
chr3 (581-629)||(1458628-1458676)
chr3 (584-628)||(4276977-4277021)
chr3 (577-629)||(31524066-31524117)
chr3 (584-628)||(37341315-37341359)
chr3 (159-207)||(38176949-38176997)
chr3 (594-630)||(45332557-45332593)
chr3 (159-207)||(49758212-49758260)
[»] chr8 (39 HSPs)
chr8 (336-515)||(44587388-44587565)
chr8 (19-106)||(44587623-44587710)
chr8 (572-629)||(43042130-43042187)
chr8 (581-628)||(20271105-20271152)
chr8 (581-628)||(21057733-21057780)
chr8 (20-91)||(30273689-30273760)
chr8 (581-628)||(36009914-36009961)
chr8 (584-641)||(8402483-8402538)
chr8 (592-641)||(42072671-42072720)
chr8 (581-629)||(2288599-2288647)
chr8 (30-82)||(25939032-25939084)
chr8 (590-630)||(34504386-34504426)
chr8 (581-641)||(40175973-40176033)
chr8 (581-641)||(40694692-40694752)
chr8 (586-629)||(2288690-2288733)
chr8 (160-238)||(10864996-10865074)
chr8 (581-627)||(27072908-27072954)
chr8 (581-627)||(35586496-35586542)
chr8 (152-233)||(13469363-13469444)
chr8 (584-629)||(23848267-23848312)
chr8 (596-641)||(26018539-26018584)
chr8 (20-85)||(40796539-40796604)
chr8 (581-641)||(20271008-20271068)
chr8 (581-641)||(21057636-21057696)
chr8 (581-629)||(34504468-34504516)
chr8 (175-238)||(26536585-26536648)
chr8 (585-635)||(30649954-30650002)
chr8 (581-628)||(40566548-40566595)
chr8 (594-641)||(40696201-40696248)
chr8 (160-238)||(26930054-26930132)
chr8 (596-626)||(35586419-35586449)
chr8 (583-629)||(38835002-38835048)
chr8 (580-629)||(40175892-40175942)
chr8 (581-626)||(13772487-13772532)
chr8 (160-237)||(21306950-21307027)
chr8 (583-628)||(38357571-38357616)
chr8 (598-635)||(42209446-42209483)
chr8 (588-629)||(43042229-43042270)
chr8 (567-622)||(24306362-24306418)
[»] scaffold0169 (2 HSPs)
scaffold0169 (336-507)||(22892-23061)
scaffold0169 (18-130)||(22746-22858)
[»] chr5 (33 HSPs)
chr5 (20-93)||(14489334-14489407)
chr5 (594-641)||(4190072-4190119)
chr5 (581-629)||(17474864-17474912)
chr5 (571-641)||(4158158-4158228)
chr5 (577-641)||(3907733-3907797)
chr5 (581-641)||(36059286-36059346)
chr5 (581-629)||(4190150-4190200)
chr5 (585-628)||(13122043-13122086)
chr5 (581-628)||(28907368-28907415)
chr5 (581-628)||(28943763-28943810)
chr5 (581-628)||(41169482-41169529)
chr5 (20-93)||(27039794-27039865)
chr5 (581-629)||(3907656-3907702)
chr5 (587-628)||(22399776-22399817)
chr5 (584-625)||(25545313-25545354)
chr5 (602-635)||(35244861-35244894)
chr5 (22-91)||(38356654-38356723)
chr5 (581-628)||(25545220-25545265)
chr5 (581-641)||(32309676-32309736)
chr5 (584-628)||(42420109-42420153)
chr5 (590-641)||(33029573-33029624)
chr5 (568-622)||(9999775-9999829)
chr5 (598-628)||(22399862-22399892)
chr5 (591-641)||(27195262-27195312)
chr5 (572-626)||(43461952-43462006)
chr5 (594-627)||(825072-825105)
chr5 (591-624)||(33420656-33420689)
chr5 (596-641)||(41169405-41169450)
chr5 (584-628)||(3416266-3416310)
chr5 (590-626)||(4003532-4003568)
chr5 (563-635)||(17474787-17474859)
chr5 (581-629)||(40927697-40927745)
chr5 (581-633)||(42249410-42249462)
[»] chr4 (41 HSPs)
chr4 (581-641)||(33414003-33414063)
chr4 (565-641)||(16457904-16457980)
chr4 (581-641)||(21433952-21434012)
chr4 (568-627)||(52375010-52375069)
chr4 (584-641)||(19382300-19382357)
chr4 (581-641)||(52374917-52374977)
chr4 (581-628)||(7403175-7403222)
chr4 (581-628)||(21433873-21433920)
chr4 (567-629)||(9024001-9024063)
chr4 (570-627)||(1338524-1338580)
chr4 (584-641)||(2247658-2247715)
chr4 (581-641)||(1338433-1338491)
chr4 (581-626)||(2247580-2247625)
chr4 (565-630)||(7403075-7403140)
chr4 (21-85)||(11116161-11116225)
chr4 (581-629)||(15134567-15134615)
chr4 (585-629)||(15134658-15134702)
chr4 (568-628)||(34119627-34119687)
chr4 (572-628)||(41840684-41840740)
chr4 (581-641)||(45654090-45654150)
chr4 (585-628)||(2324762-2324805)
chr4 (584-627)||(31758690-31758733)
chr4 (590-633)||(32286318-32286361)
chr4 (572-641)||(993210-993277)
chr4 (586-628)||(3688663-3688705)
chr4 (160-234)||(7438047-7438121)
chr4 (578-624)||(25592292-25592338)
chr4 (580-629)||(3688569-3688618)
chr4 (18-63)||(50858466-50858511)
chr4 (581-629)||(993288-993336)
chr4 (581-629)||(41840593-41840641)
chr4 (581-640)||(48791232-48791291)
chr4 (581-611)||(16458028-16458058)
chr4 (590-628)||(38036246-38036284)
chr4 (568-641)||(38036314-38036385)
chr4 (581-627)||(42516538-42516584)
chr4 (160-198)||(49320245-49320283)
chr4 (576-629)||(34119711-34119763)
chr4 (566-606)||(8108951-8108991)
chr4 (581-641)||(9023910-9023970)
chr4 (581-641)||(16577253-16577313)
[»] chr2 (44 HSPs)
chr2 (565-629)||(42251254-42251318)
chr2 (568-641)||(33171678-33171751)
chr2 (572-628)||(16209366-16209422)
chr2 (565-625)||(23001414-23001474)
chr2 (581-629)||(42094293-42094341)
chr2 (572-629)||(44247529-44247586)
chr2 (584-641)||(45300446-45300503)
chr2 (581-627)||(41496059-41496105)
chr2 (571-628)||(25666788-25666845)
chr2 (588-629)||(37810153-37810194)
chr2 (584-641)||(37810225-37810282)
chr2 (580-641)||(42251162-42251223)
chr2 (581-641)||(9430216-9430276)
chr2 (581-641)||(25666877-25666937)
chr2 (583-627)||(33069169-33069213)
chr2 (584-640)||(35715053-35715109)
chr2 (20-79)||(14150332-14150391)
chr2 (581-628)||(42029434-42029481)
chr2 (594-629)||(44247629-44247664)
chr2 (581-627)||(1930670-1930716)
chr2 (584-626)||(18719734-18719776)
chr2 (160-234)||(34753402-34753476)
chr2 (581-630)||(1469739-1469788)
chr2 (567-628)||(3466374-3466434)
chr2 (581-642)||(15194535-15194596)
chr2 (21-82)||(32835946-32836007)
chr2 (572-629)||(42029333-42029390)
chr2 (581-629)||(3466478-3466526)
chr2 (581-629)||(12779741-12779789)
chr2 (568-628)||(29160828-29160888)
chr2 (177-233)||(30874279-30874335)
chr2 (581-628)||(12703472-12703519)
chr2 (590-641)||(33171608-33171659)
chr2 (20-86)||(13221826-13221892)
chr2 (581-622)||(2683474-2683515)
chr2 (160-233)||(13450352-13450425)
chr2 (590-635)||(33069252-33069297)
chr2 (30-86)||(40492433-40492490)
chr2 (581-629)||(12779502-12779549)
chr2 (584-624)||(21309794-21309834)
chr2 (577-629)||(30841005-30841057)
chr2 (162-238)||(34576202-34576278)
chr2 (583-627)||(44487245-44487289)
chr2 (581-621)||(45300367-45300407)
[»] chr1 (32 HSPs)
chr1 (561-641)||(34437578-34437658)
chr1 (581-641)||(49822607-49822667)
chr1 (581-634)||(34437683-34437736)
chr1 (584-626)||(40669023-40669065)
chr1 (18-86)||(3158423-3158491)
chr1 (581-641)||(31970120-31970180)
chr1 (581-628)||(2542702-2542749)
chr1 (20-79)||(3215058-3215117)
chr1 (572-629)||(2542793-2542850)
chr1 (568-629)||(38663742-38663803)
chr1 (581-641)||(38663651-38663711)
chr1 (581-628)||(16661815-16661862)
chr1 (583-634)||(34783433-34783484)
chr1 (581-640)||(38948172-38948231)
chr1 (13-84)||(46149308-46149379)
chr1 (572-629)||(40668922-40668977)
chr1 (590-627)||(31851952-31851989)
chr1 (567-624)||(45215423-45215480)
chr1 (581-629)||(7444372-7444420)
chr1 (18-85)||(30091975-30092042)
chr1 (585-628)||(45563158-45563201)
chr1 (584-622)||(15366504-15366542)
chr1 (184-234)||(15597534-15597584)
chr1 (21-63)||(19477384-19477426)
chr1 (603-641)||(22336914-22336952)
chr1 (581-634)||(39131565-39131616)
chr1 (595-641)||(45563080-45563126)
chr1 (581-641)||(21281477-21281538)
chr1 (572-633)||(35752129-35752190)
chr1 (584-629)||(40374127-40374172)
chr1 (601-629)||(16257545-16257573)
chr1 (581-641)||(31970199-31970259)
[»] scaffold0620 (1 HSPs)
scaffold0620 (584-629)||(9237-9282)
[»] scaffold0137 (1 HSPs)
scaffold0137 (581-641)||(8259-8319)
[»] scaffold0003 (1 HSPs)
scaffold0003 (581-641)||(136400-136460)
[»] scaffold0015 (1 HSPs)
scaffold0015 (581-628)||(201049-201096)


Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-135; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 336 - 641
Target Start/End: Original strand, 2276024 - 2276337
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  2276024 cacaactttcttggcatccaaaccaaaatctacattcgaagaagtgttaaatctcgcacccattgaatagcatggtaaagacccaatgctttgcctacat 2276123  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacacagcccaaaatattgattttagacgagaca 535  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2276124 ccgaatagcaaacgggtttggaccacaatgttttagctttgataaaattcccgtattcatctctaatacacagcccaaaatattgattttagacgagaca 2276223  T
Q  536 aaataagatagagtttgtctaacatatgcaatgagaaatgttagc--------aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  2276224 aaataagatagggtttgtctaacatatgcaatgagaaatgttagcaacacactaacacacacttttcaacacactctctttgattggttaaaattcacat 2276323  T
Q  628 ggatcccaacaaat 641  Q
    |||||||| |||||    
T  2276324 ggatcccaccaaat 2276337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 2274841 - 2275061
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctacactcatccttta 117  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  2274841 cgagcaagaatatgagcgaccacattcgcttgtctccgactaaacttcaccttaaagttttcaaaataatcattgcaattcttcctacactcatccctta 2274940  T
Q  118 tagctctaaactccaccttatagtttcaaaatatttattgaaactagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaa 217  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||    
T  2274941 tagctctaaactccaccttatagtttcaaaataattattgaaactagcgaaacgacgggcactcacgtgcccgccttttcgctatttttactgcgttaaa 2275040  T
Q  218 tattgaaaattatgaactatg 238  Q
    | |||||||||||||||||||    
T  2275041 ttttgaaaattatgaactatg 2275061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 565 - 627
Target Start/End: Complemental strand, 7017241 - 7017179
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7017241 aatgagaaatgctagcaacacacatttttcaatacactctctttgattggttaaaattcacat 7017179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 565 - 627
Target Start/End: Complemental strand, 7032599 - 7032537
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7032599 aatgagaaatgctagcaacacacatttttcaatacactctctttgattggttaaaattcacat 7032537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 565 - 641
Target Start/End: Original strand, 11201277 - 11201353
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||| |||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  11201277 aatgaggaatgctagcaacacacactttccaacacactctctttcattagttaaaattcacatgggtcccaccaaat 11201353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 49107044 - 49106984
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  49107044 aacacacacttttcaacacactctctttgattggttaaaattcacataggtcccaccaaat 49106984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 569 - 635
Target Start/End: Original strand, 10056611 - 10056677
Alignment:
Q  569 agaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatccca 635  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  10056611 agaaatgttagtaacacatacttttcaacacactctttttgattggtcaaaattcacatggaaccca 10056677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 12275877 - 12275817
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |||| ||||| |||||    
T  12275877 aacacacactttccaacacactctcttcgattggttaaaattcatatgggtcccaccaaat 12275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 566 - 629
Target Start/End: Original strand, 26862900 - 26862961
Alignment:
Q  566 atgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||| ||||||||| |||  ||||||||||| |||||||||||||||||||||||    
T  26862900 atgagaaatgttatcaacacacatttt--aacacactctccttgattggttaaaattcacatgg 26862961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 3235559 - 3235606
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3235559 aacacacactttccaatacactctctttgattggttaaaattcacatg 3235606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 27804710 - 27804769
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttc 79  Q
    ||||||||||||||||||| ||||| ||||| ||||||| |||| |||||||||||||||    
T  27804710 agcaagagtatgagcgacctcattcgcttgtttccgactgaactccaccttagagttttc 27804769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 641
Target Start/End: Complemental strand, 46074205 - 46074134
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||| |||||||||||||| |||  |||||||||||||| |||||||||||||||||||  ||||| |||||    
T  46074205 gagaaaagttagcaacacacatttt--aacacactctctttaattggttaaaattcacatgagtcccatcaaat 46074134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 629
Target Start/End: Original strand, 49106895 - 49106954
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||  ||| |||||||| ||||||||||| |||||||||||||||    
T  49106895 gagaaatgttagcaacacac--tttccaacacacactctttgattgattaaaattcacatgg 49106954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 18089838 - 18089793
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  18089838 acacactttttaacacactctctttggttggttaaaattcacatgg 18089793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 641
Target Start/End: Complemental strand, 26863049 - 26862992
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||| || ||||||||| |||||||||||||||||||| ||||| |||||    
T  26863049 acacacttttcatcaaactctctttaattggttaaaattcacatgggtcccaccaaat 26862992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 40134523 - 40134465
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  40134523 aacacacactttccaacacactctct--gattggttaaaattcacatgggtcccaccaaat 40134465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 641
Target Start/End: Complemental strand, 2276423 - 2276356
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| |||||||||||| |||  |||||||| ||||| ||||||||||||||||||| |||||| |||||    
T  2276423 aatgctagcaacacacatttt--aacacactatctttaattggttaaaattcacatgaatcccaccaaat 2276356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 629
Target Start/End: Complemental strand, 3235705 - 3235650
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| ||||||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  3235705 aatgctagcaacacaca--ttccaacacactctttttgattggttaaaattcacatgg 3235650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 5443668 - 5443622
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  5443668 aacacacatttttcaacatactttctttgattggttaaaattcacat 5443622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 5452713 - 5452667
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  5452713 aacacacatttttcaacatactttctttgattggttaaaattcacat 5452667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 641
Target Start/End: Original strand, 7526133 - 7526178
Alignment:
Q  596 acacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||    
T  7526133 acacactcactttgatttgttaaaattcacatggatcccaccaaat 7526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 641
Target Start/End: Original strand, 24516559 - 24516616
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| |||| ||||| ||| |||||||||||||||||||||||||| ||||| |||||    
T  24516559 acactctttccaacatactttctttgattggttaaaattcacatgggtcccaccaaat 24516616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 629
Target Start/End: Original strand, 29356932 - 29356965
Alignment:
Q  596 acacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||||||||||||||||    
T  29356932 acacactctctttgattggttaaaattcacatgg 29356965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 626
Target Start/End: Original strand, 31042139 - 31042184
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||    
T  31042139 aacacacacttttcaatacattatctttgattggttaaaattcaca 31042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 21081715 - 21081640
Alignment:
Q  159 aactagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaac 234  Q
    ||||||||||| ||||  |||||| ||||||  |||| ||||||||||||| ||||||   |||||||||||||||    
T  21081715 aactagcgaaaagacaaacactcatgtgcccatctttccgctatttttactgcgctaatatttgaaaattatgaac 21081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 627
Target Start/End: Complemental strand, 26647826 - 26647783
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||||||||||| | |||||||||||| |||||||||    
T  26647826 acacacttttcaacacactatttttgattggttagaattcacat 26647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 634
Target Start/End: Complemental strand, 10056762 - 10056709
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatccc 634  Q
    ||||| |||||||||||||||||||||| ||| |||||||| || |||| ||||    
T  10056762 aacacgcacttttcaacacactctctttaattagttaaaatccatatgggtccc 10056709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 629
Target Start/End: Original strand, 12275741 - 12275786
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||| ||||||||||||||  ||||||||||| ||||||||    
T  12275741 acacactttccaacacactctcttcaattggttaaaaatcacatgg 12275786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 621
Target Start/End: Complemental strand, 316498 - 316458
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaat 621  Q
    |||||||| ||||||||||| ||||||||||||| ||||||    
T  316498 aacacacatttttcaacacattctctttgattggataaaat 316458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 27240805 - 27240885
Alignment:
Q  158 aaactagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaactatg 238  Q
    |||||||||||| ||| |||||||| ||||| | |||| |||| || ||||| ||| |||  |||||||||||||| ||||    
T  27240805 aaactagcgaaaagacgggcactcatgtgccagtctttccgctcttcttactgcgcaaaaatttgaaaattatgaattatg 27240885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 47497839 - 47497779
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||| | | | |||||||||||||||||||||||||  ||||| |||||    
T  47497839 aacacacatttttcaatatattttctttgattggttaaaattcacatgagtcccaccaaat 47497779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 1e-61; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 336 - 515
Target Start/End: Complemental strand, 1512203 - 1512026
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1512203 cacaactttcttggcatccaactcaaaatctacattcgaaa--gttgtaattctcgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 1512106  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacacagcccaaaa 515  Q
    || || ||||||||||  | |||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1512105 ccgaagagcaaacgggaatcgaccacaatgttttagctttgataaaattcctgtattcatctctaatacacagcccaaaa 1512026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 1512349 - 1512237
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctacactcatccttta 117  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||| |||    
T  1512349 cgagcaagagtatgagcgaccacattcgcttgtctccgactaaactccaccttagaattttcaaaacaatcattgcaattcttcctacattcatccatta 1512250  T
Q  118 tagctctaaactc 130  Q
    |||||| ||||||    
T  1512249 tagctccaaactc 1512237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 5477351 - 5477408
Alignment:
Q  26 agtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaa 83  Q
    |||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  5477351 agtatgagtgacctcattcgcttgtctccgactaaactccaccttagagttttcaaaa 5477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 629
Target Start/End: Complemental strand, 24110201 - 24110148
Alignment:
Q  576 ttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  24110201 ttagcaacacacacttttcaatatactctctttaattggttaaaattcacatgg 24110148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 629
Target Start/End: Complemental strand, 1473748 - 1473686
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggtt-aaaattcacatgg 629  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  1473748 gagaaatgccagcaacacacacttttcaacatactctctttgattgtttaaaaattcacatgg 1473686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 629
Target Start/End: Original strand, 1473618 - 1473663
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  1473618 acacatttttcaacacactatctttgattggttaaaattcacatgg 1473663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 626
Target Start/End: Complemental strand, 4033131 - 4033086
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  4033131 aacacacacttttcaatacactatctttgattggttaaaattcaca 4033086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 34093948 - 34093903
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  34093948 acacacttttcaacataatctctttgattggttaaaattcacatgg 34093903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 5706758 - 5706710
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  5706758 aacacatacttttcaacacactctctttgattgattaaaatttacatgg 5706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 12200404 - 12200464
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttca 80  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||| || |||| ||||||||    
T  12200404 agcaagagtatgagcgacctcattcgcttgtctccaactaaactccatcttaaagttttca 12200464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 628
Target Start/End: Original strand, 12731557 - 12731601
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  12731557 acacacttctcaacacattctctttgattggttaaaattcacatg 12731601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 624
Target Start/End: Original strand, 24110072 - 24110106
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattca 624  Q
    |||||||||||||||||||||||||||||||||||    
T  24110072 ttttcaacacactctctttgattggttaaaattca 24110106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 625
Target Start/End: Original strand, 4494397 - 4494438
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcac 625  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  4494397 acacatttttcaacacactttctttgattggttaaaattcac 4494438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 626
Target Start/End: Complemental strand, 17390036 - 17389991
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||    
T  17390036 aacacgcaattttcaacactctctctttgattggttaaaattcaca 17389991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 7413996 - 7414032
Alignment:
Q  49 gtctccgactaaacttcaccttagagttttcaaaata 85  Q
    |||||||||||||||||| ||||||||||||||||||    
T  7413996 gtctccgactaaacttcatcttagagttttcaaaata 7414032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 10729999 - 10729959
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattca 624  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  10729999 acacacttttcaacacgctctctttgatcggttaaaattca 10729959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 641
Target Start/End: Original strand, 479812 - 479863
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||| ||||| | |||||||||||||||||||||| ||||||| |||||    
T  479812 ttttcaaaacactttatttgattggttaaaattcacattgatcccaccaaat 479863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 28865520 - 28865481
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  28865520 ttttcaacacgctctctttgattggttaaaactcacatgg 28865481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 641
Target Start/End: Complemental strand, 31989268 - 31989213
Alignment:
Q  586 acacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||| | | ||||||||||| ||||||||  ||||||||||||||||||    
T  31989268 acacttttcaatatattctctttgatttgttaaaatatacatggatcccaacaaat 31989213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 7425066 - 7425100
Alignment:
Q  49 gtctccgactaaacttcaccttagagttttcaaaa 83  Q
    |||||||||||||||||| ||||||||||||||||    
T  7425066 gtctccgactaaacttcatcttagagttttcaaaa 7425100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 9645056 - 9645010
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||| ||||| ||||||| ||| ||||||||||||||||||||||    
T  9645056 aacacatactttccaacacaatctttttgattggttaaaattcacat 9645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 9651073 - 9651027
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||| ||||| ||||||| ||| ||||||||||||||||||||||    
T  9651073 aacacatactttccaacacaatctttttgattggttaaaattcacat 9651027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 12731693 - 12731647
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| ||||    
T  12731693 aacacacattttccaacacactctttttgattggttaaaatttacat 12731647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 641
Target Start/End: Original strand, 3150200 - 3150269
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| |||||||||| | ||||||||| ||  | ||| |||||||||||||||||||| ||||| |||||    
T  3150200 aatgctagcaacacatatttttcaacagacaatttttaattggttaaaattcacatgggtcccaccaaat 3150269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 627
Target Start/End: Original strand, 6643311 - 6643361
Alignment:
Q  575 gttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||| | |||  ||||||||||| |||||||||||||||||||||    
T  6643311 gttagcaacacatatttt--aacacactctcattgattggttaaaattcacat 6643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 11650916 - 11650949
Alignment:
Q  608 tgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||||||||||||||||| |||||    
T  11650916 tgattggttaaaattcacatggatcccaccaaat 11650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 7417944 - 7417980
Alignment:
Q  49 gtctccgactaaacttcaccttagagttttcaaaata 85  Q
    |||||||||||||||||| |||||| |||||||||||    
T  7417944 gtctccgactaaacttcatcttagaattttcaaaata 7417980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 336 - 515
Target Start/End: Original strand, 1539124 - 1539301
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||  ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  1539124 cacaactttcttggcatccaactcaaaatctacattcgaaa--gttgtaattctcgcacctattgaatagcatggtaaagacctaatgcttcgcctacat 1539221  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacacagcccaaaa 515  Q
    ||||| ||||||||||  | |||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||||    
T  1539222 ccaaagagcaaacgggaatcgaccacaatgttttagctttgataaaattcatgtattcatctctaatacacaacccaaaa 1539301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 336 - 515
Target Start/End: Original strand, 54332669 - 54332846
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    ||||||||||||||  || || ||||||||||| || ||||  ||  ||||||| |||||||||||||| |||| | ||||| |||||||||||||||||    
T  54332669 cacaactttcttggtgtcaaactcaaaatctacgtttgaaa--gttgtaattctcgcacccattgaatatcatgatgaagactcaatgcttcgcctacat 54332766  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacacagcccaaaa 515  Q
    ||||| |||||||||| || |||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  54332767 ccaaagagcaaacgggattcgaccacaatgttttagctttgataaaattcctgtgttcatctctaatacacagcccaaaa 54332846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 22522584 - 22522689
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctacactcatccttta 117  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |||    
T  22522584 cgagcaagagtatgagcgaccacattcgcttgtctccgactaaactccaccttagagttttcaaaaaaatcattgcaattcttcctacattcatccatta 22522683  T
Q  118 tagctc 123  Q
    | ||||    
T  22522684 tggctc 22522689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 1538979 - 1539090
Alignment:
Q  19 gagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctacactcatcctttat 118  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  1538979 gagcaagagtatgagcgaccatattcgcttgtctccgactaaactccaccttagagttttcaaaacaatcattgcaattcttcctacattcatccattat 1539078  T
Q  119 agctctaaactc 130  Q
    | ||| ||||||    
T  1539079 atctccaaactc 1539090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 336 - 515
Target Start/End: Original strand, 22522730 - 22522907
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    ||||||||||||||| ||||| ||||||||||  |||||||  ||  ||||||  |||||||||||||||||| ||||||||||||||||| ||||||||    
T  22522730 cacaactttcttggcgtccaactcaaaatctatgttcgaaa--gttgtaattcccgcacccattgaatagcattgtaaagacccaatgctttgcctacat 22522827  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacacagcccaaaa 515  Q
    || || || ||||||| || |  ||| |||| ||||||||||||||||   ||| ||||||||||||||| |||||||||    
T  22522828 ccgaagagaaaacgggattcggacacaatgtgttagctttgataaaatactcgtgttcatctctaatacaaagcccaaaa 22522907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 6032814 - 6032926
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctacactcatccttta 117  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||| || | |||||||||||||||||||||| |||||| |||    
T  6032814 cgagcaagagtatgagcgaccacattcgcttgtctccgactaaacaccaccttagagtttttaagaaaatcattgcaattcttcctacattcatccatta 6032913  T
Q  118 tagctctaaactc 130  Q
    | |||| ||||||    
T  6032914 tggctccaaactc 6032926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 54332522 - 54332635
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagtttt-caaaataatcattgcaattcttcctacactcatccttt 116  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||||| | |||| ||    
T  54332522 cgagcaagagtatgagcgaccacattcgtttgtctccgactaaactccaccttagagttttgaaaaaaaatcattgcaattcttcctacatttatccatt 54332621  T
Q  117 atagctctaaactc 130  Q
    || |||| ||||||    
T  54332622 atggctccaaactc 54332635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 6033010 - 6033141
Alignment:
Q  383 taattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacatccaaatagcaaacgggtttggaccaccatgttttagctttgataaaa 482  Q
    ||||||| ||||||||||||||||||||||| |||  ||||||||||| |||||| || |||||| ||| || |||||| |||||||||||||||| |||    
T  6033010 taattctcgcacccattgaatagcatggtaaggacggaatgcttcgccaacatccgaagagcaaatgggattcgaccacaatgttttagctttgat-aaa 6033108  T
Q  483 tttccgtattcatctctaatacacagcccaaaa 515  Q
    || |||| ||||||||| || |||| |||||||    
T  6033109 ttcccgtgttcatctcttatgcacaacccaaaa 6033141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 3901632 - 3901572
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3901632 aacacacacttttcaacacactctctttgattggttaaaattcacatgggtcccaccaaat 3901572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 567 - 641
Target Start/End: Original strand, 3901485 - 3901559
Alignment:
Q  567 tgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||  |||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  3901485 tgagaaatactagcaacacatatttttcaacacattctctttgattggttaaaattcacatgggtcccaccaaat 3901559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 568 - 629
Target Start/End: Complemental strand, 11532587 - 11532526
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||| || |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11532587 gagaaatgctaacaacacacactttctaacacactctctttgattggttaaaattcacatgg 11532526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 36480707 - 36480767
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  36480707 aacacaccctttccaacacactctctttgattggttaaaattcacatgggacccaacaaat 36480767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 568 - 628
Target Start/End: Complemental strand, 40554190 - 40554130
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  40554190 gagaaatgctagcaacacacaattttcaatacactctctttgattggttaaaactcacatg 40554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 567 - 627
Target Start/End: Complemental strand, 799394 - 799334
Alignment:
Q  567 tgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||| ||||    
T  799394 tgagaaatgctagcaacacacacttttcaatactttctctttgattggttaaaattgacat 799334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 36480846 - 36480786
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||| ||||| |||||    
T  36480846 aacacacacttttcaacattctctctttgattggctaaaattcacatgggtcccaccaaat 36480786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 620
Target Start/End: Complemental strand, 19560772 - 19560729
Alignment:
Q  577 tagcaacacacacttttcaacacactctctttgattggttaaaa 620  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  19560772 tagcaacacacatttttcaacacactctctttgattggttaaaa 19560729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 641
Target Start/End: Original strand, 13540161 - 13540236
Alignment:
Q  564 caatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||| ||||||||||||||||| |||  |||||||||||||||||||||| ||| | |||||| ||||| |||||    
T  13540161 caatgaggaatgttagcaacacacatttt--aacacactctctttgattggtttaaactaacatggctcccaccaaat 13540236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 19792343 - 19792278
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaata 85  Q
    |||||| |||||||| ||| ||||  ||||||||||| |||||| |||||||||||||||||||||    
T  19792343 agcaagtgtatgagcaaccacatttgcttgtctccgattaaactccaccttagagttttcaaaata 19792278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 641
Target Start/End: Original strand, 29955045 - 29955098
Alignment:
Q  588 acttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| |||||    
T  29955045 acttttcaacacactttttttgattggttaaaattcacatgggtcccatcaaat 29955098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 641
Target Start/End: Original strand, 30004199 - 30004252
Alignment:
Q  588 acttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| |||||    
T  30004199 acttttcaacacactttttttgattggttaaaattcacatgggtcccatcaaat 30004252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 572 - 625
Target Start/End: Complemental strand, 46555640 - 46555587
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcac 625  Q
    |||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  46555640 aatgctaggaacacacactttttaacacactctctttgattgattaaaattcac 46555587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 635
Target Start/End: Original strand, 799259 - 799314
Alignment:
Q  580 caacacacacttttcaacacactctctttgattggttaaaattcacatggatccca 635  Q
    ||||||||| |||||||||| |||||||| ||||||| |||||||||||| |||||    
T  799259 caacacacatttttcaacacgctctctttaattggtttaaattcacatgggtccca 799314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 583 - 629
Target Start/End: Original strand, 799147 - 799193
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  799147 cacacacttttcaacacactctctttaattagtttaaattcacatgg 799193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 629
Target Start/End: Complemental strand, 29955187 - 29955129
Alignment:
Q  571 aaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||| |||||||||||||||||||| |||||||  |||||| ||||||||||| ||||    
T  29955187 aaatgctagcaacacacacttttcaatacactcttcttgattagttaaaattcatatgg 29955129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 629
Target Start/End: Complemental strand, 30004341 - 30004283
Alignment:
Q  571 aaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||| |||||||||||||||||||| |||||||  |||||| ||||||||||| ||||    
T  30004341 aaatgctagcaacacacacttttcaatacactcttcttgattagttaaaattcatatgg 30004283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 35357326 - 35357364
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35357326 ttttcaacacactctctttgattggttaaaactcacatg 35357364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 629
Target Start/End: Complemental strand, 35357441 - 35357408
Alignment:
Q  596 acacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||||||||||||||||    
T  35357441 acacactctctttgattggttaaaattcacatgg 35357408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 631
Target Start/End: Original strand, 49750611 - 49750652
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatggat 631  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  49750611 ttttcaacacattctctttgattgattaaaattcacatggat 49750652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 585 - 641
Target Start/End: Original strand, 19560633 - 19560689
Alignment:
Q  585 cacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||| |||||| |||||||||||| ||||||| |||| ||||| |||||    
T  19560633 cacacttttcaatacactcgctttgattggttgaaattcatatgggtcccaccaaat 19560689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 31205369 - 31205417
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||| | ||| ||||||||||||||||||||||||||||| ||||||    
T  31205369 aacacatattttccaacacactctctttgattggttaaaatttacatgg 31205417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 635
Target Start/End: Original strand, 32880999 - 32881051
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacatggatccca 635  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||||| |||||    
T  32880999 cacacatttttcaacatactctccttgattggttaatattcacatgggtccca 32881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 14345151 - 14345198
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||| | ||||||||||||| |||||||||||||||||| ||||||    
T  14345151 aacacatatttttcaacacactttctttgattggttaaaatccacatg 14345198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 44890477 - 44890430
Alignment:
Q  580 caacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| ||||    
T  44890477 caacatacatttttcaacacactctttttgattggttaaaatttacat 44890430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 628
Target Start/End: Complemental strand, 31205495 - 31205461
Alignment:
Q  594 caacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||||||||||| ||||||||||||    
T  31205495 caacacactctctttgattggtcaaaattcacatg 31205461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 37189274 - 37189236
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  37189274 tttttaacagactctctttgattggttaaaattcacatg 37189236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 606
Target Start/End: Complemental strand, 40716045 - 40716007
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctct 606  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  40716045 gagaaatgttagcaacactcacttttcaacactctctct 40716007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 628
Target Start/End: Complemental strand, 48543525 - 48543474
Alignment:
Q  575 gttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||| |||  || ||||||||||| |||||||||||||||||||    
T  48543525 gttagcaacacacatttt--aatacactctctttaattggttaaaattcacatg 48543474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 3300715 - 3300769
Alignment:
Q  571 aaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||    
T  3300715 aaatgctagcaacacacatttt--aacacattctctttgatcggttaaaattcacat 3300769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 626
Target Start/End: Original strand, 11532423 - 11532480
Alignment:
Q  569 agaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||||  |||||||||||||||  |||| ||||| |||||||||| ||||||||||    
T  11532423 agaaatgccagcaacacacactttctaacatactctttttgattggtcaaaattcaca 11532480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 26986300 - 26986341
Alignment:
Q  588 acttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||| |||| |||||| ||||||||||||||||    
T  26986300 acttttcaacacattctccttgattagttaaaattcacatgg 26986341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 587 - 628
Target Start/End: Complemental strand, 36007488 - 36007447
Alignment:
Q  587 cacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||| | ||||||| |||||||||||||||||    
T  36007488 cacttttcaacacattttctttgagtggttaaaattcacatg 36007447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 40117862 - 40117817
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||    
T  40117862 acacacttttcaacacactcttattcattggttaaaattcaaatgg 40117817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 1458676 - 1458628
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| |||||||||||||||||||  |||||||||| ||||||| ||||    
T  1458676 aacaaacacttttcaacacactcttcttgattggtttaaattcatatgg 1458628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 628
Target Start/End: Original strand, 4276977 - 4277021
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||||||||||| | ||||| |||||||| ||||||||||||||    
T  4276977 acacacttttcaatatactctttttgattgattaaaattcacatg 4277021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 577 - 629
Target Start/End: Original strand, 31524066 - 31524117
Alignment:
Q  577 tagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||| |||| |||||| | ||||||||||||||||||| ||||||    
T  31524066 tagcaacacacattttt-aacacattttctttgattggttaaaatttacatgg 31524117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 628
Target Start/End: Complemental strand, 37341359 - 37341315
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||||||| ||||| ||| | |||||||||||||||||||||||    
T  37341359 acacactttccaacatactttatttgattggttaaaattcacatg 37341315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 38176949 - 38176997
Alignment:
Q  159 aactagcgaaacgacaggcactcacgtgcccgccttttcgctattttta 207  Q
    ||||||||||| |||||||||||||||| | | |||| |||||||||||    
T  38176949 aactagcgaaaagacaggcactcacgtgtctgtctttccgctattttta 38176997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 630
Target Start/End: Original strand, 45332557 - 45332593
Alignment:
Q  594 caacacactctctttgattggttaaaattcacatgga 630  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  45332557 caacacactttctttaattggttaaaattcacatgga 45332593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 49758212 - 49758260
Alignment:
Q  159 aactagcgaaacgacaggcactcacgtgcccgccttttcgctattttta 207  Q
    |||||||| || ||| |||||||||||||||| ||||||||| ||||||    
T  49758212 aactagcgtaaagacgggcactcacgtgcccgtcttttcgctcttttta 49758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 4e-52; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 336 - 515
Target Start/End: Complemental strand, 44587565 - 44587388
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    ||||||||||||||| ||||  ||||||||||| || ||||  ||  ||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  44587565 cacaactttcttggcgtccatctcaaaatctacgtttgaaa--gttgtaattctcgcacccattgaatatcatggtaaagacccaatgcttcgcctacat 44587468  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacacagcccaaaa 515  Q
    || || |||||||||| || |||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  44587467 ccgaagagcaaacgggattcgaccacaatgttttagctttgataaaattcctgtattcatctctaatacacagcccaaaa 44587388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 44587710 - 44587623
Alignment:
Q  19 gagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctaca 106  Q
    ||||||||| |||||| ||| |||||  ||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  44587710 gagcaagagcatgagcaaccacattcgattgtctccgactaaactccaccttagagttttcaaaataatcaatggaattcttcctaca 44587623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 629
Target Start/End: Original strand, 43042130 - 43042187
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  43042130 aatgctagcaacacacactttccaacgcactctctttgattgattaaaattcacatgg 43042187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 20271152 - 20271105
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  20271152 aacacgcacttttcaacacactctctttgattagttaaaattcacatg 20271105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 21057780 - 21057733
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  21057780 aacacgcacttttcaacacactctctttgattagttaaaattcacatg 21057733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 30273689 - 30273760
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcatt 91  Q
    ||||||||||||||||||  ||||| |||||||||||||||||| |||||||| |||||  |||||| ||||    
T  30273689 agcaagagtatgagcgacttcattcgcttgtctccgactaaactccaccttagtgtttttgaaataaccatt 30273760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 36009961 - 36009914
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  36009961 aacacacactttccaacacactctctttggttggttaaaattcacatg 36009914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 584 - 641
Target Start/End: Original strand, 8402483 - 8402538
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  8402483 acacacttttcaacacactct--ttgattgtttaaaattcacatgggtcccaacaaat 8402538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 592 - 641
Target Start/End: Original strand, 42072671 - 42072720
Alignment:
Q  592 ttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  42072671 ttcaacacactctctttgattggttaacattcacatgggtcccaccaaat 42072720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 2288599 - 2288647
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  2288599 aacacacactttcgaacacactctctttgattggttaaaatttacatgg 2288647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 25939084 - 25939032
Alignment:
Q  30 tgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaa 82  Q
    ||||||||| ||||| ||||||||||||||||||  |||||||||||||||||    
T  25939084 tgagcgacctcattcgcttgtctccgactaaactctaccttagagttttcaaa 25939032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 630
Target Start/End: Original strand, 34504386 - 34504426
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatgga 630  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  34504386 ttttcaacacactctttttgattggttaaaattcacatgga 34504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 40176033 - 40175973
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||||||| ||||| |||||    
T  40176033 aacacacactttttaacacactccttttaattggttaaaattcacatgggtcccaccaaat 40175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 40694752 - 40694692
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||| ||||| |||||    
T  40694752 aacacacacttttcaatacactcttttttattagttaaaattcacatgggtcccaccaaat 40694692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 586 - 629
Target Start/End: Complemental strand, 2288733 - 2288690
Alignment:
Q  586 acacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  2288733 acacttttcaacaatctctctttgattggttaaaattcacatgg 2288690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 10864996 - 10865074
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaactatg 238  Q
    |||||||||| ||| |||||||| ||||||| |||| |||| ||||||||  | ||||  |||||||||||||||||||    
T  10864996 actagcgaaaagaccggcactcatgtgcccgtctttccgctctttttactgtgataaaatttgaaaattatgaactatg 10865074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 27072954 - 27072908
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  27072954 aacacacacttttcaacacattctttttgattggttaaaatttacat 27072908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 35586542 - 35586496
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||    
T  35586542 aacacacacttttcaacacattctctttaattgattaaaattcacat 35586496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 13469444 - 13469363
Alignment:
Q  152 ttattgaaactagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaa 233  Q
    ||||| ||||| |||||| ||| |||||||||||||||| |||| |||| |||||| || | ||||  ||||||||||||||    
T  13469444 ttatttaaacttgcgaaaagacgggcactcacgtgcccgtctttccgctctttttattatgttaaagtttgaaaattatgaa 13469363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 629
Target Start/End: Original strand, 23848267 - 23848312
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  23848267 acacacttttcaacacactatctttgattgattaaaattcatatgg 23848312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 641
Target Start/End: Complemental strand, 26018584 - 26018539
Alignment:
Q  596 acacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||    
T  26018584 acacactctccttgattggttaaaattcacatgggtcccatcaaat 26018539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 40796604 - 40796539
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaata 85  Q
    |||||| |||||||| ||| ||||  ||||| ||||| |||||||||||||| |||||||||||||    
T  40796604 agcaagtgtatgagcaaccacatttgcttgtttccgattaaacttcaccttaaagttttcaaaata 40796539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 20271008 - 20271068
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggtt--aaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||||||  |||||||||||||||  ||||||||||||||||||| |||||    
T  20271008 aacacacatttttcaacac--tctctttgattggttaaaaaattcacatggatcccaccaaat 20271068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 21057636 - 21057696
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggtt--aaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||||||  |||||||||||||||  ||||||||||||||||||| |||||    
T  21057636 aacacacatttttcaacac--tctctttgattggttaaaaaattcacatggatcccaccaaat 21057696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 34504516 - 34504468
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  34504516 aacatacacttttcaacacactttttttgattggttaaaattcgcatgg 34504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 26536648 - 26536585
Alignment:
Q  175 ggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaactatg 238  Q
    |||| ||||||||||| |||| |||| |||||||| | |||||  |||||||||||||||||||    
T  26536648 ggcaatcacgtgcccgtctttccgctctttttactgcactaaaatttgaaaattatgaactatg 26536585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 635
Target Start/End: Original strand, 30649954 - 30650002
Alignment:
Q  585 cacacttttcaacacactctctttgattggttaaaattcacatggatccca 635  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||||||||    
T  30649954 cacacttttcaacacattct--ttgatttgttaaaattcacatggatccca 30650002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 40566595 - 40566548
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||| | |||||||||| |||| |||||||||||||||||||||||    
T  40566595 aacacatatttttcaacacgctctttttgattggttaaaattcacatg 40566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 641
Target Start/End: Original strand, 40696201 - 40696248
Alignment:
Q  594 caacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||| ||||||| |||||||||||||||| ||||| |||||    
T  40696201 caacacactctttttgattagttaaaattcacatgggtcccaccaaat 40696248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 26930132 - 26930054
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaactatg 238  Q
    |||||||||| ||| |||| |||| ||| || |||| |||| |||||||| || ||||  |||||||||||||||||||    
T  26930132 actagcgaaaagacgggcattcacttgctcgtctttccgctctttttactgcgttaaaatttgaaaattatgaactatg 26930054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 596 - 626
Target Start/End: Original strand, 35586419 - 35586449
Alignment:
Q  596 acacactctctttgattggttaaaattcaca 626  Q
    |||||||||||||||||||||||||||||||    
T  35586419 acacactctctttgattggttaaaattcaca 35586449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 629
Target Start/End: Original strand, 38835002 - 38835048
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  38835002 cacacacatttcaacacattctctttgattgactaaaattcacatgg 38835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 580 - 629
Target Start/End: Original strand, 40175892 - 40175942
Alignment:
Q  580 caacacacacttttcaacacac-tctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||||||| | | ||| ||||||||||||||||||||    
T  40175892 caacacacacttttcaacacactttttttttattggttaaaattcacatgg 40175942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 626
Target Start/End: Complemental strand, 13772532 - 13772487
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||| |||||| |||||| |||||||||||| ||||||||||||    
T  13772532 aacacaaacttttaaacacattctctttgattgattaaaattcaca 13772487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 21306950 - 21307027
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaactat 237  Q
    |||||| ||| ||||| ||||||||||| |  |||| | || |||||||| |||||||  ||||||||||||||||||    
T  21306950 actagcaaaaagacagacactcacgtgctcatctttccactctttttactgcgctaaaatttgaaaattatgaactat 21307027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 583 - 628
Target Start/End: Original strand, 38357571 - 38357616
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||| ||||||||||||||||||| ||| ||| |||||||    
T  38357571 cacacactttccaacacactctctttgattagttgaaactcacatg 38357616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 635
Target Start/End: Complemental strand, 42209483 - 42209446
Alignment:
Q  598 acactctctttgattggttaaaattcacatggatccca 635  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  42209483 acacactctttgattggttaaaattcacatggttccca 42209446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 629
Target Start/End: Complemental strand, 43042270 - 43042229
Alignment:
Q  588 acttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||    
T  43042270 acttttcaatacactctttttgattggttaaaattcatatgg 43042229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 622
Target Start/End: Complemental strand, 24306418 - 24306362
Alignment:
Q  567 tgagaaatgttagcaacacacacttttcaacacactctc-tttgattggttaaaatt 622  Q
    ||||||||||||| |||||||| |||   |||||||||| |||||||||||||||||    
T  24306418 tgagaaatgttaggaacacacattttaacacacactctcttttgattggttaaaatt 24306362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 336 - 507
Target Start/End: Original strand, 22892 - 23061
Alignment:
Q  336 cacaactttcttggcatccaaatcaaaatctacattcgaaaaagtgttaattcttgcacccattgaatagcatggtaaagacccaatgcttcgcctacat 435  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  22892 cacaactttcttggcatccaactcaaaatctacattcgaaa--gttgtaattctcgcacccattgcatagcatggtaaagacccaatgcttcgcctacat 22989  T
Q  436 ccaaatagcaaacgggtttggaccaccatgttttagctttgataaaatttccgtattcatctctaatacaca 507  Q
    || || ||||||||||  | |||||| ||||||||||||||||||||||   |||||||||| |||||||||    
T  22990 ccgaagagcaaacgggaatcgaccacaatgttttagctttgataaaattcttgtattcatctttaatacaca 23061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 22746 - 22858
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgcaattcttcctacactcatccttta 117  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||    
T  22746 cgagcaagagtatgagcgaccacattcgcttgtctccgactaaacttcaccttagagttttcaaaacaatcattgcaattcttcctacattcatccatta 22845  T
Q  118 tagctctaaactc 130  Q
    |||||| ||||||    
T  22846 tagctccaaactc 22858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 5e-24; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 14489334 - 14489407
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgc 93  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14489334 agcaagagtatgagcgacctcattcgcttgtctccgactaaacttcaccttagagttttcgaaataaacattgc 14489407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 594 - 641
Target Start/End: Original strand, 4190072 - 4190119
Alignment:
Q  594 caacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4190072 caacacactctctttgattggttaaaattcacatggatcccaacaaat 4190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 17474912 - 17474864
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17474912 aacacacacttttcaacacacactctttgattgattaaaattcacatgg 17474864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 641
Target Start/End: Complemental strand, 4158228 - 4158158
Alignment:
Q  571 aaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||| |||||||||||| |||| || | ||||||||||||||||||||||||||| | |||||| |||||    
T  4158228 aaatgatagcaacacacattttttaatatactctctttgattggttaaaattcacacgaatcccatcaaat 4158158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 641
Target Start/End: Complemental strand, 3907797 - 3907733
Alignment:
Q  577 tagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||  ||| ||||||| ||| |||||||||||||||||||||||| ||||| |||||    
T  3907797 tagcaacacactttttccaacacattctttttgattggttaaaattcacatgggtcccaccaaat 3907733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 36059346 - 36059286
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||| ||||| ||||||||| | ||||||||||||||||| |||||||||||| |||||    
T  36059346 aacacatactttccaacacactttatttgattggttaaaatttacatggatcccatcaaat 36059286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 4190200 - 4190150
Alignment:
Q  581 aacacacacttttcaacacac--tctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  4190200 aacacacacttttcaacacacggtctctttgataggttaaaattcacatgg 4190150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 585 - 628
Target Start/End: Original strand, 13122043 - 13122086
Alignment:
Q  585 cacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  13122043 cacacttttcaacatactctctttgattgggtaaaattcacatg 13122086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 28907368 - 28907415
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  28907368 aacacacatttttcaacacattctctttgatcggttaaaattcacatg 28907415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 28943763 - 28943810
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  28943763 aacacacatttttcaacacattctctttgatcggttaaaattcacatg 28943810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 41169529 - 41169482
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||||    
T  41169529 aacacacatttttcaacacactctctttgatccgttaaaattcacatg 41169482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 27039794 - 27039865
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcattgc 93  Q
    ||||||||||||||||||| ||||| || ||||||   |||||| ||||||||||||||| |||||| ||||||    
T  27039794 agcaagagtatgagcgacctcattcgctcgtctcct--taaactccaccttagagttttcgaaataaacattgc 27039865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 3907656 - 3907702
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  3907656 aacaaacacttttcaacacactct--ttgattggttaaaattcacatgg 3907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 628
Target Start/End: Original strand, 22399776 - 22399817
Alignment:
Q  587 cacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  22399776 cacttttcaacacactctttttgattggataaaattcacatg 22399817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 625
Target Start/End: Complemental strand, 25545354 - 25545313
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcac 625  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  25545354 acacacattttaacacactctctttgattggttaaaattcac 25545313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 635
Target Start/End: Original strand, 35244861 - 35244894
Alignment:
Q  602 tctctttgattggttaaaattcacatggatccca 635  Q
    ||||||||||||||||||||||||||||||||||    
T  35244861 tctctttgattggttaaaattcacatggatccca 35244894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 38356723 - 38356654
Alignment:
Q  22 caagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataatcatt 91  Q
    |||||||||||| |||  || ||||||||||||||||||| | ||||||||| ||||| |||||| ||||    
T  38356723 caagagtatgagggacttcactcacttgtctccgactaaattccaccttagaattttcgaaataaacatt 38356654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 25545220 - 25545265
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||    
T  25545220 aacacacatttttcaacacactct--ttgattggttaaaattcacatg 25545265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 32309736 - 32309676
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||| || ||||||||||| ||||||||| ||||  |||||| |||||    
T  32309736 aacacacacttttcaacgcattctctttgatttgttaaaatttacattaatcccaccaaat 32309676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 628
Target Start/End: Complemental strand, 42420153 - 42420109
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||    
T  42420153 acacgcttttcaacacactctatttgattggttaaaactcacatg 42420109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 641
Target Start/End: Complemental strand, 33029624 - 33029573
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||||||||||| |||||||| |||||||  ||||| |||||    
T  33029624 ttttcaacacactctctttgatcggttaaaactcacatgagtcccaccaaat 33029573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 622
Target Start/End: Complemental strand, 9999829 - 9999775
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaatt 622  Q
    |||||||| |||||||||||| |||   ||||||| |||||||||||||||||||    
T  9999829 gagaaatgctagcaacacacattttaacacacactgtctttgattggttaaaatt 9999775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 628
Target Start/End: Complemental strand, 22399892 - 22399862
Alignment:
Q  598 acactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||||||||||||||||||||    
T  22399892 acactctctttgattggttaaaattcacatg 22399862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 641
Target Start/End: Original strand, 27195262 - 27195312
Alignment:
Q  591 tttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||    
T  27195262 tttcaacacactctttttaattgattaaaattcacatggattccaccaaat 27195312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 626
Target Start/End: Original strand, 43461952 - 43462006
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    ||||||||||||||||| |||  |||||||||| ||| || ||||||||||||||    
T  43461952 aatgttagcaacacacattttctaacacactctttttaatcggttaaaattcaca 43462006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 825072 - 825105
Alignment:
Q  594 caacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||| ||||||||||||||||||||||    
T  825072 caacacactctatttgattggttaaaattcacat 825105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 624
Target Start/End: Original strand, 33420656 - 33420689
Alignment:
Q  591 tttcaacacactctctttgattggttaaaattca 624  Q
    |||||||||||||| |||||||||||||||||||    
T  33420656 tttcaacacactctttttgattggttaaaattca 33420689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 596 - 641
Target Start/End: Original strand, 41169405 - 41169450
Alignment:
Q  596 acacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||| ||||||||||| |||||||||||||| ||| |||||    
T  41169405 acacactctatttgattggttgaaattcacatggattccaccaaat 41169450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 628
Target Start/End: Original strand, 3416266 - 3416310
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||    
T  3416266 acacacatttcaacacactttctttgattgattaaaatttacatg 3416310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 626
Target Start/End: Original strand, 4003532 - 4003568
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||||||||||||| || |||||||||||||||||    
T  4003532 ttttcaacacactctcatttattggttaaaattcaca 4003568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 17474787 - 17474859
Alignment:
Q  563 gcaatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatccca 635  Q
    ||||| ||||||| |||| ||||||| |||   ||||||| | ||||||| ||||||||||||||||| ||||    
T  17474787 gcaataagaaatgctagcgacacacattttaacacacactttatttgatttgttaaaattcacatggaaccca 17474859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 40927745 - 40927697
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||| | ||||||||| ||| |||||||||||| |||||||||||||    
T  40927745 aacacaaatttttcaacaaactatctttgattggtcaaaattcacatgg 40927697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 633
Target Start/End: Original strand, 42249410 - 42249462
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcc 633  Q
    |||||| | ||||||||||||| | ||| ||||||||||||| ||||||||||    
T  42249410 aacacatatttttcaacacactatttttaattggttaaaatttacatggatcc 42249462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 33414003 - 33414063
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33414003 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaccaaat 33414063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 565 - 641
Target Start/End: Original strand, 16457904 - 16457980
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||| |||| |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16457904 aatgaggaatgctagcaacacacattttctaacacactctctttgattggttaaaattcacatggatcccatcaaat 16457980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 21434012 - 21433952
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  21434012 aacatacacttttcaacacactctcattgattggttaaaattcacatggatcccaccaaat 21433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 568 - 627
Target Start/End: Complemental strand, 52375069 - 52375010
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  52375069 gagaaatgttagcaacacacatttttcaatacactctttttgattggttaaaattcacat 52375010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 584 - 641
Target Start/End: Original strand, 19382300 - 19382357
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  19382300 acacactttccaacacactctatttgattggttaaaattcacatggatcccaccaaat 19382357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 52374917 - 52374977
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||||    
T  52374917 aacacacacttttcaacacactctctttgatagattaaaattcacatggatctcaccaaat 52374977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 7403222 - 7403175
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  7403222 aacacacactattcaacacactctctttgattggttaaaattcacatg 7403175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 21433873 - 21433920
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  21433873 aacacacatttttcaacacactctctttgattggttaaaattcacatg 21433920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 567 - 629
Target Start/End: Complemental strand, 9024063 - 9024001
Alignment:
Q  567 tgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  9024063 tgagaaatgctagcaatacacacttttcaacacattctctttgatttgttaaaatttacatgg 9024001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 627
Target Start/End: Complemental strand, 1338580 - 1338524
Alignment:
Q  570 gaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  1338580 gaaatgttagcaacacacacatttca-cacactctctttgattggttaagattcacat 1338524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 641
Target Start/End: Complemental strand, 2247715 - 2247658
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||    
T  2247715 acacactttccaacccactctctttgattggttaaaattaacatggatcccaccaaat 2247658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 1338433 - 1338491
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||||||  ||||||||||||||||||| |||||||||||||| |||||    
T  1338433 aacacacatttttcaacac--tctctttgattggttaaaaatcacatggatcccaccaaat 1338491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 626
Target Start/End: Original strand, 2247580 - 2247625
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  2247580 aacacacacttttcaacacactctctttaattgattaaaattcaca 2247625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 565 - 630
Target Start/End: Original strand, 7403075 - 7403140
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgga 630  Q
    ||||||||||| ||| ||||||||||||| | || ||||||||| ||||||||||| |||||||||    
T  7403075 aatgagaaatgctagtaacacacactttttatcatactctctttaattggttaaaactcacatgga 7403140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 11116225 - 11116161
Alignment:
Q  21 gcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaata 85  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||  |||||||||||| |||||||    
T  11116225 gcaagagtgtgagcgacctcgttcgcttgtctccgactaaactctaccttagagtttgcaaaata 11116161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 15134567 - 15134615
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  15134567 aacacacatttttcaacacattctcttttattggttaaaattcacatgg 15134615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 629
Target Start/End: Complemental strand, 15134702 - 15134658
Alignment:
Q  585 cacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  15134702 cacacttttcaacacactgtctgtgattggttaaaattcacatgg 15134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 628
Target Start/End: Original strand, 34119627 - 34119687
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||| |||||||| ||||||||||||||  |||||| ||||||||||||||||    
T  34119627 gagaaatgctagtaacacacatttttcaacacactcgttttgatcggttaaaattcacatg 34119687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 628
Target Start/End: Complemental strand, 41840740 - 41840684
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||| |||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  41840740 aatgctagcaacacatattgttcaacacactctatttgattggttaaaattcacatg 41840684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 45654150 - 45654090
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||| | |||| |||||||| | |||||||||||||||||||||||||||||| |||||    
T  45654150 aacacatattttttaacacactttttttgattggttaaaattcacatggatcccatcaaat 45654090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 585 - 628
Target Start/End: Original strand, 2324762 - 2324805
Alignment:
Q  585 cacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||| | |||||||||||||||||||||||||||||    
T  2324762 cacacttttcaatatactctctttgattggttaaaattcacatg 2324805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 584 - 627
Target Start/End: Original strand, 31758690 - 31758733
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  31758690 acacacttttcaacacattctatttgattggttaaaattcacat 31758733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 633
Target Start/End: Complemental strand, 32286361 - 32286318
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatggatcc 633  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  32286361 ttttcaacacactcttttttattggttaaaattcacatggatcc 32286318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 641
Target Start/End: Original strand, 993210 - 993277
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| ||||||||||||  ||||||||||||||  ||||||||||||||||||||||  ||||| |||||    
T  993210 aatgctagcaacacacatctttcaacacactct--ttgattggttaaaattcacatgagtcccaccaaat 993277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 586 - 628
Target Start/End: Complemental strand, 3688705 - 3688663
Alignment:
Q  586 acacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  3688705 acactttccaacacactttctttgattggttaaaattcacatg 3688663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 7438047 - 7438121
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaac 234  Q
    |||||||||| ||| ||| |||||||||||| |||| ||||||||||| ||||||||   ||| |||||||||||    
T  7438047 actagcgaaaagacgggccctcacgtgcccgtctttccgctatttttattacgctaacgtttgtaaattatgaac 7438121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 25592338 - 25592292
Alignment:
Q  578 agcaacacacacttttcaacacactctctttgattggttaaaattca 624  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||    
T  25592338 agcaacacacactttttaatacactctctttcattggttaaaattca 25592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 629
Target Start/End: Original strand, 3688569 - 3688618
Alignment:
Q  580 caacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||| ||||||||||| | ||||||||| ||||||||||||||||    
T  3688569 caacacacatttttcaacacattttctttgattagttaaaattcacatgg 3688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 50858511 - 50858466
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaact 63  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  50858511 cgagcaagagtatgagcgacctcgttcgcttgtctccgactaaact 50858466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 993336 - 993288
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||| ||||| ||||||||||||| |||| |||||||||||    
T  993336 aacacacactttccaacaaactctctttgatttgttagaattcacatgg 993288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 41840593 - 41840641
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||| | |||||||||||||||||||||||| |||||||| ||||||    
T  41840593 aacacatatttttcaacacactctctttgattgattaaaatttacatgg 41840641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 640
Target Start/End: Original strand, 48791232 - 48791291
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaa 640  Q
    |||||||||||| ||||||||||||||| || |||| ||||||| ||||| |||| ||||    
T  48791232 aacacacactttccaacacactctctttaatcggttgaaattcatatggaacccaccaaa 48791291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 611
Target Start/End: Complemental strand, 16458058 - 16458028
Alignment:
Q  581 aacacacacttttcaacacactctctttgat 611  Q
    |||||||||||||||||||||||||||||||    
T  16458058 aacacacacttttcaacacactctctttgat 16458028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 38036246 - 38036284
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  38036246 ttttcaacacattttctttgattggttaaaattcacatg 38036284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 641
Target Start/End: Complemental strand, 38036385 - 38036314
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| |||||||||||| |||  |||||| | ||||||||| |||||||||||||||   ||||||||||    
T  38036385 gagaaatgctagcaacacacatttt--aacacattgtctttgatttgttaaaattcacatgagacccaacaaat 38036314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 627
Target Start/End: Complemental strand, 42516584 - 42516538
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||||||||||| |||||||  |||||| ||||||||||    
T  42516584 aacacacacttttcaacacattctctttatttggtttaaattcacat 42516538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 49320245 - 49320283
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcg 198  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  49320245 actagcgaaaagacaggcactcacgtgcccgtcttttcg 49320283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 576 - 629
Target Start/End: Complemental strand, 34119763 - 34119711
Alignment:
Q  576 ttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||| | ||||||||||| || |||||||| ||||||||||||||||||    
T  34119763 ttagcaacagatacttttcaacataccctctttga-tggttaaaattcacatgg 34119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 8108951 - 8108991
Alignment:
Q  566 atgagaaatgttagcaacacacacttttcaacacactctct 606  Q
    |||||||||| ||||||||| ||||||||||||| ||||||    
T  8108951 atgagaaatgctagcaacactcacttttcaacactctctct 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 9023910 - 9023970
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| |||||||| |||||||  | ||||||||| |||||||||||||  |||||||||||    
T  9023910 aacatacactttttaacacacgttttttgattgggtaaaattcacatgagtcccaacaaat 9023970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 16577253 - 16577313
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||| |||| | ||||| |||||    
T  16577253 aacacacatttttcaacacattctgtttgatttgttaaaatttacataggtcccaccaaat 16577313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 565 - 629
Target Start/End: Complemental strand, 42251318 - 42251254
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42251318 aatgagaaatgctagcaacacacacttttcaacacactctctttgattgattaaaattcacatgg 42251254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 568 - 641
Target Start/End: Complemental strand, 33171751 - 33171678
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  33171751 gagaaatgctagcaccacacacttttcaacacactctctttgattggttaaatttcacatgggtcccaccaaat 33171678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 628
Target Start/End: Original strand, 16209366 - 16209422
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  16209366 aatgctagcaacacacactttccaacacactctctttaattggttaaaattcacatg 16209422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 565 - 625
Target Start/End: Original strand, 23001414 - 23001474
Alignment:
Q  565 aatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcac 625  Q
    ||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  23001414 aatgagaaatactagcaacacacatttttcaacatactctctttgattggttaaaattcac 23001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 42094341 - 42094293
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42094341 aacacacacttttcaacacacactctttgattggttaaaattcacatgg 42094293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 629
Target Start/End: Original strand, 44247529 - 44247586
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  44247529 aatgttagcaacacacatttttcaacaaactatctttgattggttgaaattcacatgg 44247586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 641
Target Start/End: Complemental strand, 45300503 - 45300446
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||    
T  45300503 acacacttttcaatacactctttttgattggttaaaattcacatggattccatcaaat 45300446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 627
Target Start/End: Original strand, 41496059 - 41496105
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  41496059 aacacacacttttcaatacactatctttgattggttaaaattcacat 41496105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 628
Target Start/End: Original strand, 25666788 - 25666845
Alignment:
Q  571 aaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||| ||| |||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  25666788 aaatgctaggaacacacatttttcaacacactctatttgattgattaaaattcacatg 25666845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 37810153 - 37810194
Alignment:
Q  588 acttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  37810153 acttttcaacacactctctttgattggttataattcacatgg 37810194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 641
Target Start/End: Complemental strand, 37810282 - 37810225
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||| ||||| |||||    
T  37810282 acacactttccatcacactcactttgattggttaaaattcacatgggtcccaccaaat 37810225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 641
Target Start/End: Original strand, 42251162 - 42251223
Alignment:
Q  580 caacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||| |||||    
T  42251162 caacacacatttttcgacacactctctttgatcggttaaaattcgcatgggtcccaccaaat 42251223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 9430276 - 9430216
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||| | |||| |||||    
T  9430276 aacacacacttttcaacatattctatttgattggttaaaattcacatgaaccccatcaaat 9430216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 25666937 - 25666877
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| ||| ||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  25666937 aacatacaattttcaacacactctctttgatgtgttaaaatccacatggatcccaccaaat 25666877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 627
Target Start/End: Original strand, 33069169 - 33069213
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  33069169 cacacacttttcaacacactttctttgatcggttaaaattcacat 33069213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 640
Target Start/End: Complemental strand, 35715109 - 35715053
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaa 640  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| | ||||| ||||    
T  35715109 acacacttttcaatacactctctttgattggttaaaatttacataggtcccatcaaa 35715053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 14150332 - 14150391
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttc 79  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||   |||||||||||||    
T  14150332 agcaagagtatgagcgacctcattcgcttgtctccgactgaactcatccttagagttttc 14150391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 42029481 - 42029434
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||    
T  42029481 aacacacacttttcaacacacttttttttattggttaaaattcacatg 42029434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 594 - 629
Target Start/End: Complemental strand, 44247664 - 44247629
Alignment:
Q  594 caacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||||||||||||||||||||||||    
T  44247664 caacacactctctttgattggttaaaattcacatgg 44247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 627
Target Start/End: Original strand, 1930670 - 1930716
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  1930670 aacacacatttttcaagacactctttttgattggttaaaattcacat 1930716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 18719734 - 18719776
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  18719734 acacatttttcaacacactctttttgattggttaaaattcaca 18719776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 34753476 - 34753402
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaac 234  Q
    |||||||||| ||| |||||||||||||||| ||||  ||| |||||| ||||||||   |||||||||||||||    
T  34753476 actagcgaaaagacgggcactcacgtgcccgtctttctgctctttttattacgctaatgtttgaaaattatgaac 34753402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 630
Target Start/End: Original strand, 1469739 - 1469788
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgga 630  Q
    |||||| | ||||||||||||||| ||| |||||||||||||||||||||    
T  1469739 aacacatatttttcaacacactctatttaattggttaaaattcacatgga 1469788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 628
Target Start/End: Original strand, 3466374 - 3466434
Alignment:
Q  567 tgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||  ||||||||| | |||| ||||| ||||||||||||||||||||||||||||    
T  3466374 tgagaaatgcaagcaacacatattttttaacac-ctctctttgattggttaaaattcacatg 3466434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 642
Target Start/End: Original strand, 15194535 - 15194596
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaata 642  Q
    |||| |||||||||| |||||||| ||||||||||||||| |||||||| || || ||||||    
T  15194535 aacatacacttttcagcacactctttttgattggttaaaagtcacatgggtcgcaccaaata 15194596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 32835946 - 32836007
Alignment:
Q  21 gcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaa 82  Q
    |||||| ||||||| ||| |||||  |||||||||||||||||  |||||||||||||||||    
T  32835946 gcaagattatgagctacctcattcgtttgtctccgactaaactcaaccttagagttttcaaa 32836007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 629
Target Start/End: Original strand, 42029333 - 42029390
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| |||||||||||| ||||||||||||| | ||||||| ||||||||||| ||||    
T  42029333 aatgctagcaacacacatttttcaacacactgtatttgatttgttaaaattcatatgg 42029390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 3466526 - 3466478
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||  |||| | ||||||||||||||||||||||||||||    
T  3466526 aacacacactttcaaacatagtctctttgattggttaaaattcacatgg 3466478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 12779789 - 12779741
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  12779789 aacacacacttaccaacacactctttttaattggttaaaattcacatgg 12779741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 628
Target Start/End: Original strand, 29160828 - 29160888
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||| |||||||||||||||||||||  ||||| |||| ||||||| ||||||    
T  29160828 gagaaatgctagtaacacacacttttcaacacaccatctttaattgattaaaatccacatg 29160888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 30874279 - 30874335
Alignment:
Q  177 cactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaa 233  Q
    |||||||||||||| ||||||||| |||||||| ||||||   ||||||||||||||    
T  30874279 cactcacgtgcccgtcttttcgctttttttactgcgctaatacttgaaaattatgaa 30874335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 12703472 - 12703519
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||||||| ||||| ||||||||||||||| |||||||||    
T  12703472 aacacacatttttcaatacactttctttgattggttaatattcacatg 12703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 641
Target Start/End: Original strand, 33171608 - 33171659
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||| |||||||||| |||||||||| |||| ||||| |||||    
T  33171608 ttttcaacacactttctttgattgtttaaaattcatatgggtcccaccaaat 33171659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 13221892 - 13221826
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataa 86  Q
    |||||| |||||||| ||| || |  |||||||| |||||||||  |||||||||||||||||||||    
T  13221892 agcaagtgtatgagcaacctcagttgcttgtctctgactaaactctaccttagagttttcaaaataa 13221826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 622
Target Start/End: Complemental strand, 2683515 - 2683474
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaatt 622  Q
    |||||||||||||||  ||||||| |||||||||||||||||    
T  2683515 aacacacacttttcacgacactctttttgattggttaaaatt 2683474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 13450425 - 13450352
Alignment:
Q  160 actagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaa 233  Q
    |||||||||| ||| || ||||||||||||| |||| |||| |||||| | ||||||   ||||||||||||||    
T  13450425 actagcgaaaagacgggtactcacgtgcccgtctttccgctctttttattgcgctaatgtttgaaaattatgaa 13450352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 635
Target Start/End: Complemental strand, 33069297 - 33069252
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacatggatccca 635  Q
    ||||||||||||||| ||||||||||||||| |||| ||| |||||    
T  33069297 ttttcaacacactctttttgattggttaaaaatcacttgggtccca 33069252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 40492490 - 40492433
Alignment:
Q  30 tgagcgaccgcattcacttgtctccgactaaacttcacc-ttagagttttcaaaataa 86  Q
    ||||||||| ||||| ||||||||||||||||||  ||| ||||||||| ||||||||    
T  40492490 tgagcgacctcattcgcttgtctccgactaaactctacctttagagtttacaaaataa 40492433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 12779502 - 12779549
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||||||    
T  12779502 aacatacatttttcaacacattct-tttgattggttaaaattcacatgg 12779549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 21309834 - 21309794
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattca 624  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  21309834 acacactttttaacacacttactttgattggttaaaattca 21309794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 577 - 629
Target Start/End: Original strand, 30841005 - 30841057
Alignment:
Q  577 tagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||||||| |||  |||| ||||| ||||||||||||||||||| ||||    
T  30841005 tagcaacacacattttctaacatactctttttgattggttaaaattcatatgg 30841057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 34576202 - 34576278
Alignment:
Q  162 tagcgaaacgacaggcactcacgtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaactatg 238  Q
    |||||||| ||| | ||||||||| | || |||| |||| |||||||| |||||||  ||| |||||||||||||||    
T  34576202 tagcgaaaagacggacactcacgtactcgtctttccgctctttttactgcgctaaaatttgtaaattatgaactatg 34576278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 627
Target Start/End: Complemental strand, 44487289 - 44487245
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||| || ||||||| |||||| |||||||||||||||    
T  44487289 cacacactttttaatacactctttttgatcggttaaaattcacat 44487245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 621
Target Start/End: Original strand, 45300367 - 45300407
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaat 621  Q
    |||||||| ||||||||||||||  ||||||||||||||||    
T  45300367 aacacacatttttcaacacactccttttgattggttaaaat 45300407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 561 - 641
Target Start/End: Original strand, 34437578 - 34437658
Alignment:
Q  561 atgcaatgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||| ||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  34437578 atgctatgaggaatgctagcaacacacatttttcaacaaactctctttgattggttaaaattcacatgggtcccaccaaat 34437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 49822667 - 49822607
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49822667 aacacacatttttcaacacactctctttgattggttaaaattcacatggatcccatcaaat 49822607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 581 - 634
Target Start/End: Complemental strand, 34437736 - 34437683
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatccc 634  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34437736 aacacgcacttttcaacacactctctttgattggttaaaattcacatgggtccc 34437683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 584 - 626
Target Start/End: Complemental strand, 40669065 - 40669023
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcaca 626  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40669065 acacacttttcaacacactctctttgattggttaaaattcaca 40669023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 3158423 - 3158491
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaataa 86  Q
    |||||||||||||||| |||  || || ||||||||||||||||||  |||||||||||||||||||||    
T  3158423 cgagcaagagtatgagtgacttcactcgcttgtctccgactaaactctaccttagagttttcaaaataa 3158491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 31970120 - 31970180
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| || |||| |||||    
T  31970120 aacacacatttttcaacacactctttttgattggttaaaattcacattgaacccaccaaat 31970180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 2542702 - 2542749
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  2542702 aacacacatttttcaacacactctctttgattggttaaaatttacatg 2542749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 3215117 - 3215058
Alignment:
Q  20 agcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttc 79  Q
    ||||||||||||||||||| ||||| ||||||||| ||| |||| |||||||||||||||    
T  3215117 agcaagagtatgagcgacctcattcgcttgtctcctactgaactccaccttagagttttc 3215058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 572 - 629
Target Start/End: Complemental strand, 2542850 - 2542793
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||| || || ||| ||||||| ||||||||||||||||||||||||||||    
T  2542850 aatgttagcaatacccattttccaacacattctctttgattggttaaaattcacatgg 2542793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 568 - 629
Target Start/End: Complemental strand, 38663803 - 38663742
Alignment:
Q  568 gagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||||||| ||||||||| || ||||||||| ||||| ||| ||||||||||||||||||||    
T  38663803 gagaaatgctagcaacacgcatttttcaacatactctttttaattggttaaaattcacatgg 38663742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 38663651 - 38663711
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  38663651 aacacatatttttcaacacactctctttgattggttacaattcacataggtcccaccaaat 38663711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 628
Target Start/End: Original strand, 16661815 - 16661862
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  16661815 aacacacatttttcaacacattctctttgatcggttaaaattcacatg 16661862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 583 - 634
Target Start/End: Complemental strand, 34783484 - 34783433
Alignment:
Q  583 cacacacttttcaacacactctctttgattggttaaaattcacatggatccc 634  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||    
T  34783484 cacacacttctcaacacactatctttgattggttaaaattcatatggctccc 34783433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 640
Target Start/End: Complemental strand, 38948231 - 38948172
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaa 640  Q
    ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| ||||    
T  38948231 aacacacactttttaacacactctctttgatttgttagaattcatatggaacccatcaaa 38948172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 46149308 - 46149379
Alignment:
Q  13 catcacgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaat 84  Q
    |||| ||||||||||| ||| ||||| ||||| ||||| | | |||||||| ||||||||||||||||||||    
T  46149308 catctcgagcaagagtctgaacgaccacattcccttgttttcaactaaactccaccttagagttttcaaaat 46149379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 629
Target Start/End: Original strand, 40668922 - 40668977
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| |||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  40668922 aatgctagcaacacacatttt--aacacactctctttgattggttaaaactcacatgg 40668977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 627
Target Start/End: Complemental strand, 31851989 - 31851952
Alignment:
Q  590 ttttcaacacactctctttgattggttaaaattcacat 627  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31851989 ttttcaacacactctctttgatttgttaaaattcacat 31851952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 624
Target Start/End: Complemental strand, 45215480 - 45215423
Alignment:
Q  567 tgagaaatgttagcaacacacacttttcaacacactctctttgattggttaaaattca 624  Q
    |||||||| ||| ||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  45215480 tgagaaatcttaccaacacacacttttcgacacattctttttgattgattaaaattca 45215423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Complemental strand, 7444420 - 7444372
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    |||| ||||||||||||||| ||||||||||  ||||||||||||||||    
T  7444420 aacaaacacttttcaacacattctctttgatgagttaaaattcacatgg 7444372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 30091975 - 30092042
Alignment:
Q  18 cgagcaagagtatgagcgaccgcattcacttgtctccgactaaacttcaccttagagttttcaaaata 85  Q
    ||||| ||||| ||||||||| | |||  |||||||||||||||||  ||||||| ||||||||||||    
T  30091975 cgagctagagtgtgagcgacctccttcgattgtctccgactaaactctaccttagtgttttcaaaata 30092042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 628
Target Start/End: Complemental strand, 45563201 - 45563158
Alignment:
Q  585 cacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    |||||||||||||||||| |||||||| |||||||||| |||||    
T  45563201 cacacttttcaacacactttctttgatcggttaaaatttacatg 45563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 622
Target Start/End: Original strand, 15366504 - 15366542
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaatt 622  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  15366504 acacactttccaacacactctttttgattggttaaaatt 15366542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 15597584 - 15597534
Alignment:
Q  184 gtgcccgccttttcgctatttttactacgctaaatattgaaaattatgaac 234  Q
    ||||||| |||||||||||||||| | |||||| | |||||||||||||||    
T  15597584 gtgcccgtcttttcgctatttttagtgcgctaacttttgaaaattatgaac 15597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 19477426 - 19477384
Alignment:
Q  21 gcaagagtatgagcgaccgcattcacttgtctccgactaaact 63  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||    
T  19477426 gcaagagtgtgagcgacctcattcgcttgtctccgactaaact 19477384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 641
Target Start/End: Original strand, 22336914 - 22336952
Alignment:
Q  603 ctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||||||||||||||||||||||||| || |||||    
T  22336914 ctctttgattggttaaaattcacatggatctcatcaaat 22336952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 634
Target Start/End: Original strand, 39131565 - 39131616
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatccc 634  Q
    |||||||||||| |||| |  |||||||||||||||||||||||||||| ||||    
T  39131565 aacacacactttccaactc--tctctttgattggttaaaattcacatgggtccc 39131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 641
Target Start/End: Original strand, 45563080 - 45563126
Alignment:
Q  595 aacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| |||||||||||||||||| ||||||| ||||| |||||    
T  45563080 aacacactatctttgattggttaaaatgcacatggctcccaccaaat 45563126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 21281477 - 21281538
Alignment:
Q  581 aacacacacttttcaacacactctcttt-gattggttaaaattcacatggatcccaacaaat 641  Q
    |||| ||||||||||||||| ||| ||| ||||||||||||||||||| | ||||| |||||    
T  21281477 aacatacacttttcaacacattcttttttgattggttaaaattcacataggtcccaccaaat 21281538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 633
Target Start/End: Complemental strand, 35752190 - 35752129
Alignment:
Q  572 aatgttagcaacacacacttttcaacacactctctttgattggttaaaattcacatggatcc 633  Q
    |||| |||||||||||  ||||||||||||| | ||| ||||||||||||||| ||| ||||    
T  35752190 aatgctagcaacacactgttttcaacacactattttttattggttaaaattcagatgaatcc 35752129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 40374172 - 40374127
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||| ||||||| || |||| ||||||||||||||||||||||||    
T  40374172 acacatttttcaatacgctctatttgattggttaaaattcacatgg 40374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 629
Target Start/End: Original strand, 16257545 - 16257573
Alignment:
Q  601 ctctctttgattggttaaaattcacatgg 629  Q
    |||||||||||||||||||||||||||||    
T  16257545 ctctctttgattggttaaaattcacatgg 16257573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 31970259 - 31970199
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||| |||||||||||||||| ||| |||| ||||| |||| |||| ||||| |||||    
T  31970259 aacacacgcttttcaacacactctttttaattgattaaatttcatatgggtcccaccaaat 31970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 9282 - 9237
Alignment:
Q  584 acacacttttcaacacactctctttgattggttaaaattcacatgg 629  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  9282 acacacttttcaacataatctctttgattggttaaaattcacatgg 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 8319 - 8259
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    ||||||||||||||||| || ||| ||||||||| ||||||||||||| |||||| |||||    
T  8319 aacacacacttttcaacgcattctttttgattggctaaaattcacatgaatcccaccaaat 8259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 136460 - 136400
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaacaaat 641  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||  ||||| |||||    
T  136460 aacacacatttttcaacacactctttttgattggttaaaactcacatgtgtcccatcaaat 136400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 628
Target Start/End: Complemental strand, 201096 - 201049
Alignment:
Q  581 aacacacacttttcaacacactctctttgattggttaaaattcacatg 628  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  201096 aacacacacttatcaacacactctctttgatttgttaagattcacatg 201049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University