View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5381_high_33 (Length: 224)
Name: NF5381_high_33
Description: NF5381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5381_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 29605334 - 29605529
Alignment:
| Q |
19 |
aagggtacatttcctctttcaccatatcatctacatctctaagtattacatctcaaccaaatcaccttatcataatacacaaaccatactccataaataa |
118 |
Q |
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| T |
29605334 |
aaggttacatttcctctttcaccatatcatctacatctctaagtattacatctcaaccaaatcaccttatcataatacacaaaccatactccataaataa |
29605433 |
T |
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| Q |
119 |
caagctaaaactcatcaaccaaatcagtaaaatcacaaacatcttcttacaatggctgcagtgttttgggcattggctttagcaagcctatgctac |
214 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29605434 |
caagctaaaacttatcaaccaaatcagtaaaatcacaaacatcttcttacaatggctgcagtgttttgggcattggctttagcaagcctatgctac |
29605529 |
T |
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