View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5384_low_14 (Length: 263)

Name: NF5384_low_14
Description: NF5384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5384_low_14
NF5384_low_14
[»] chr5 (31 HSPs)
chr5 (22-257)||(41088215-41088448)
chr5 (22-257)||(7483839-7484072)
chr5 (25-252)||(36348716-36348941)
chr5 (26-252)||(1696387-1696611)
chr5 (22-187)||(40937081-40937245)
chr5 (26-202)||(6791857-6792032)
chr5 (22-151)||(4722512-4722642)
chr5 (22-170)||(1973018-1973164)
chr5 (115-172)||(5961-6018)
chr5 (101-170)||(18309894-18309963)
chr5 (90-162)||(25499713-25499785)
chr5 (26-77)||(11357187-11357238)
chr5 (96-173)||(23190674-23190751)
chr5 (115-172)||(38855562-38855619)
chr5 (101-168)||(541093-541160)
chr5 (115-162)||(11028855-11028902)
chr5 (26-77)||(11357002-11357053)
chr5 (101-172)||(41201893-41201964)
chr5 (115-172)||(8574886-8574943)
chr5 (115-172)||(19035403-19035460)
chr5 (99-168)||(20199994-20200063)
chr5 (115-172)||(27660105-27660162)
chr5 (115-170)||(3603009-3603064)
chr5 (115-168)||(8539394-8539447)
chr5 (213-250)||(8539490-8539527)
chr5 (115-172)||(11348352-11348409)
chr5 (210-252)||(1973203-1973245)
chr5 (213-250)||(11348449-11348486)
chr5 (127-168)||(41798988-41799029)
chr5 (116-172)||(30711012-30711068)
chr5 (101-157)||(34682437-34682493)
[»] chr7 (33 HSPs)
chr7 (22-257)||(22292494-22292728)
chr7 (22-252)||(20876401-20876630)
chr7 (22-257)||(43349721-43349953)
chr7 (25-257)||(17184832-17185061)
chr7 (25-252)||(42736630-42736856)
chr7 (22-76)||(2205767-2205821)
chr7 (96-195)||(4231088-4231187)
chr7 (96-171)||(1641042-1641117)
chr7 (101-167)||(46860671-46860737)
chr7 (115-168)||(10524182-10524235)
chr7 (101-162)||(21185800-21185861)
chr7 (115-172)||(34142509-34142566)
chr7 (117-170)||(48272308-48272361)
chr7 (101-168)||(28112952-28113019)
chr7 (101-168)||(36392295-36392362)
chr7 (115-162)||(45257881-45257928)
chr7 (115-168)||(17840741-17840794)
chr7 (115-172)||(20566184-20566241)
chr7 (115-172)||(40590400-40590457)
chr7 (101-170)||(48314830-48314899)
chr7 (96-168)||(33603370-33603442)
chr7 (115-162)||(15070530-15070577)
chr7 (101-168)||(15309812-15309879)
chr7 (115-158)||(41623735-41623778)
chr7 (101-172)||(48194468-48194539)
chr7 (118-172)||(9365844-9365898)
chr7 (22-77)||(15899871-15899928)
chr7 (101-170)||(42684044-42684113)
chr7 (115-172)||(45361789-45361846)
chr7 (96-168)||(28977727-28977799)
chr7 (115-158)||(42503996-42504039)
chr7 (101-172)||(46597051-46597120)
chr7 (213-250)||(45257978-45258015)
[»] chr1 (43 HSPs)
chr1 (22-257)||(39855571-39855805)
chr1 (25-257)||(38043532-38043763)
chr1 (22-252)||(23344162-23344392)
chr1 (25-252)||(40531785-40532009)
chr1 (92-251)||(33285778-33285936)
chr1 (22-252)||(14440792-14441021)
chr1 (22-171)||(49260094-49260243)
chr1 (22-152)||(15355217-15355347)
chr1 (136-252)||(12789795-12789910)
chr1 (22-148)||(37779758-37779884)
chr1 (22-148)||(39063400-39063527)
chr1 (22-77)||(24268878-24268933)
chr1 (115-172)||(19162057-19162114)
chr1 (115-172)||(44336415-44336472)
chr1 (101-169)||(14172256-14172324)
chr1 (22-168)||(41803788-41803937)
chr1 (115-162)||(13634041-13634088)
chr1 (101-168)||(18974967-18975034)
chr1 (101-168)||(49925026-49925093)
chr1 (101-168)||(51271427-51271494)
chr1 (101-167)||(46141937-46142003)
chr1 (92-173)||(14771288-14771369)
chr1 (115-168)||(29760673-29760726)
chr1 (40-77)||(35186660-35186697)
chr1 (40-77)||(35585432-35585469)
chr1 (99-168)||(49398305-49398374)
chr1 (101-172)||(6437376-6437447)
chr1 (96-171)||(17373818-17373893)
chr1 (101-168)||(26633697-26633764)
chr1 (93-172)||(27485199-27485277)
chr1 (101-172)||(36911532-36911603)
chr1 (101-168)||(42570292-42570359)
chr1 (125-168)||(49429022-49429065)
chr1 (115-160)||(13148904-13148949)
chr1 (115-200)||(19261022-19261107)
chr1 (101-162)||(35524904-35524965)
chr1 (115-168)||(44598756-44598809)
chr1 (92-148)||(24268801-24268857)
chr1 (115-158)||(13285197-13285240)
chr1 (210-252)||(49260015-49260057)
chr1 (213-250)||(49429109-49429146)
chr1 (92-148)||(16530741-16530797)
chr1 (92-148)||(17684744-17684800)
[»] chr2 (29 HSPs)
chr2 (26-257)||(5421982-5422212)
chr2 (22-252)||(37311049-37311276)
chr2 (22-252)||(23719432-23719662)
chr2 (22-252)||(24107104-24107334)
chr2 (22-202)||(17537290-17537470)
chr2 (22-171)||(34520132-34520279)
chr2 (22-171)||(10358963-10359113)
chr2 (22-77)||(33405472-33405528)
chr2 (116-172)||(8268601-8268657)
chr2 (115-171)||(14181684-14181740)
chr2 (101-172)||(43493121-43493192)
chr2 (115-173)||(39798607-39798665)
chr2 (22-148)||(6978477-6978604)
chr2 (115-172)||(22003252-22003309)
chr2 (101-172)||(23409341-23409410)
chr2 (101-168)||(35493178-35493245)
chr2 (101-168)||(40675906-40675973)
chr2 (115-169)||(29090745-29090799)
chr2 (117-170)||(2917840-2917893)
chr2 (115-172)||(3936028-3936085)
chr2 (115-172)||(17426216-17426273)
chr2 (115-168)||(41497642-41497695)
chr2 (101-168)||(23786295-23786362)
chr2 (118-172)||(43984155-43984209)
chr2 (115-168)||(3943041-3943094)
chr2 (119-172)||(28476922-28476975)
chr2 (115-168)||(16583444-16583498)
chr2 (210-252)||(34520052-34520094)
chr2 (127-172)||(34639176-34639221)
[»] chr6 (21 HSPs)
chr6 (22-257)||(12398443-12398676)
chr6 (22-148)||(32133057-32133183)
chr6 (115-192)||(30763462-30763539)
chr6 (101-168)||(35019746-35019813)
chr6 (115-172)||(13616406-13616463)
chr6 (116-172)||(32026127-32026183)
chr6 (115-172)||(27641569-27641626)
chr6 (101-168)||(13404469-13404536)
chr6 (118-172)||(6206914-6206968)
chr6 (118-172)||(11693881-11693935)
chr6 (116-162)||(32691360-32691406)
chr6 (115-172)||(34801669-34801727)
chr6 (115-172)||(29068116-29068173)
chr6 (115-172)||(29083363-29083420)
chr6 (102-172)||(14124556-14124626)
chr6 (115-168)||(29076174-29076227)
chr6 (210-250)||(29076268-29076309)
chr6 (115-168)||(29109707-29109760)
chr6 (210-250)||(29109801-29109842)
chr6 (115-168)||(29111147-29111200)
chr6 (210-250)||(29111241-29111282)
[»] chr4 (41 HSPs)
chr4 (22-252)||(36774796-36775024)
chr4 (22-257)||(22438279-22438511)
chr4 (26-202)||(2774662-2774838)
chr4 (22-252)||(43887585-43887800)
chr4 (22-168)||(51026223-51026370)
chr4 (96-202)||(9718972-9719078)
chr4 (22-148)||(2567507-2567633)
chr4 (22-148)||(45941163-45941289)
chr4 (22-77)||(17045336-17045391)
chr4 (101-168)||(44558818-44558885)
chr4 (101-172)||(49422255-49422326)
chr4 (101-168)||(51426708-51426775)
chr4 (96-250)||(21410219-21410374)
chr4 (115-172)||(21015904-21015961)
chr4 (22-77)||(10315653-10315709)
chr4 (101-173)||(49572738-49572810)
chr4 (101-172)||(955956-956027)
chr4 (40-148)||(49815961-49816069)
chr4 (21-195)||(4909964-4910137)
chr4 (115-168)||(28083841-28083894)
chr4 (115-172)||(56140541-56140598)
chr4 (101-168)||(33383974-33384041)
chr4 (101-172)||(34528330-34528401)
chr4 (115-170)||(37959581-37959636)
chr4 (115-172)||(40352501-40352558)
chr4 (115-172)||(41793529-41793586)
chr4 (115-172)||(55799380-55799437)
chr4 (22-148)||(14968661-14968788)
chr4 (101-168)||(34151783-34151851)
chr4 (101-172)||(39590404-39590475)
chr4 (118-172)||(6176042-6176096)
chr4 (115-173)||(24076712-24076770)
chr4 (96-162)||(37868100-37868166)
chr4 (118-172)||(49096172-49096226)
chr4 (103-168)||(9491123-9491188)
chr4 (40-77)||(21171088-21171125)
chr4 (101-168)||(6281027-6281094)
chr4 (210-252)||(51026140-51026182)
chr4 (115-200)||(8866890-8866975)
chr4 (213-250)||(28083938-28083975)
chr4 (88-148)||(10315723-10315783)
[»] chr3 (51 HSPs)
chr3 (22-257)||(11377327-11377560)
chr3 (28-252)||(42321814-42322037)
chr3 (22-257)||(44929118-44929354)
chr3 (22-252)||(51016938-51017170)
chr3 (22-202)||(10051739-10051918)
chr3 (22-202)||(34470449-34470628)
chr3 (22-202)||(51011707-51011886)
chr3 (22-202)||(49275046-49275224)
chr3 (22-168)||(50457668-50457813)
chr3 (21-195)||(27096130-27096304)
chr3 (96-171)||(20374378-20374453)
chr3 (22-148)||(47759398-47759523)
chr3 (22-148)||(46412724-46412849)
chr3 (101-168)||(55267585-55267652)
chr3 (115-168)||(2267225-2267278)
chr3 (115-172)||(3493750-3493807)
chr3 (115-172)||(3497444-3497501)
chr3 (115-168)||(36136449-36136502)
chr3 (115-168)||(50998505-50998558)
chr3 (96-172)||(45098970-45099046)
chr3 (115-162)||(8397740-8397787)
chr3 (101-172)||(43571520-43571591)
chr3 (101-168)||(44490515-44490582)
chr3 (101-168)||(55205437-55205504)
chr3 (101-167)||(2430114-2430180)
chr3 (118-172)||(34645726-34645780)
chr3 (96-168)||(18441954-18442026)
chr3 (96-168)||(19487028-19487100)
chr3 (115-170)||(41579584-41579640)
chr3 (101-169)||(46345095-46345163)
chr3 (96-168)||(52567928-52568000)
chr3 (116-162)||(2645631-2645677)
chr3 (118-172)||(2950531-2950585)
chr3 (22-76)||(30194187-30194241)
chr3 (118-172)||(34051167-34051221)
chr3 (115-172)||(43478679-43478737)
chr3 (118-172)||(46406445-46406499)
chr3 (118-172)||(49138779-49138833)
chr3 (210-252)||(50457582-50457624)
chr3 (26-148)||(27188752-27188874)
chr3 (101-158)||(41805511-41805568)
chr3 (115-168)||(49217260-49217313)
chr3 (40-76)||(14633125-14633161)
chr3 (101-168)||(7247707-7247774)
chr3 (101-168)||(24700891-24700958)
chr3 (21-56)||(27096389-27096424)
chr3 (101-168)||(34691795-34691862)
chr3 (101-167)||(4002884-4002949)
chr3 (213-250)||(2267144-2267181)
chr3 (213-250)||(4002802-4002839)
chr3 (115-168)||(13894396-13894449)
[»] chr8 (23 HSPs)
chr8 (88-257)||(26488290-26488458)
chr8 (22-197)||(26488104-26488281)
chr8 (22-172)||(19241143-19241292)
chr8 (22-172)||(19314327-19314476)
chr8 (22-171)||(38032377-38032524)
chr8 (22-148)||(42167399-42167525)
chr8 (101-170)||(38872778-38872847)
chr8 (101-172)||(22550701-22550772)
chr8 (118-173)||(31170580-31170635)
chr8 (115-172)||(41016579-41016636)
chr8 (115-172)||(41276736-41276793)
chr8 (115-172)||(45066212-45066269)
chr8 (96-170)||(18438791-18438866)
chr8 (115-172)||(483981-484038)
chr8 (115-168)||(26455526-26455579)
chr8 (115-172)||(44052076-44052133)
chr8 (101-168)||(41855533-41855600)
chr8 (98-163)||(14120410-14120474)
chr8 (115-172)||(15031049-15031105)
chr8 (116-168)||(28168454-28168506)
chr8 (101-168)||(40703997-40704063)
chr8 (115-168)||(42605085-42605138)
chr8 (212-252)||(38032297-38032337)
[»] scaffold0859 (1 HSPs)
scaffold0859 (40-202)||(1942-2105)
[»] scaffold0192 (1 HSPs)
scaffold0192 (101-170)||(16559-16628)
[»] scaffold0176 (1 HSPs)
scaffold0176 (115-172)||(3434-3491)
[»] scaffold0199 (1 HSPs)
scaffold0199 (115-168)||(10847-10900)
[»] scaffold0014 (1 HSPs)
scaffold0014 (115-172)||(84745-84802)
[»] scaffold0494 (1 HSPs)
scaffold0494 (115-172)||(5496-5553)
[»] scaffold0094 (1 HSPs)
scaffold0094 (116-172)||(56-112)


Alignment Details
Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 41088448 - 41088215
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  41088448 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaac-ctatcaaatcaatcacaaaatagcaacgcaatag 41088350  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||    
T  41088349 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 41088251  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41088250 gttttggtaactcctatgctgttttgttcatatcac 41088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 7484072 - 7483839
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||          | ||||||||||||||||||||||||||||||||    
T  7484072 aacctaaactatcataacatcataaaatcaataaacttctataatcacaatttaaccaaaaaaaacc-atcaaatcaatcacaaaatagcaacgcaatag 7483974  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||       ||||||||||||    
T  7483973 gattaaaaaaacttacttgattttgtgcttgaaattggcttgaaatggcttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 7483875  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||| ||||||||||||||||||||||| ||||    
T  7483874 gttttggaaactcctatgctgttttgttcatatcac 7483839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 252
Target Start/End: Complemental strand, 36348941 - 36348716
Alignment:
Q  25 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggat 124  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||          ||| |||||||||||||||||||||| ||||||| ||    
T  36348941 ctaaactatcataacatcataaaatcaataaacctctataattgcaatttaaccaaacaaaa-ctaacaaatcaatcacaaaatagcaatgcaatagaat 36348843  T
Q  125 tcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagtt 224  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||  || ||||||||||       |||||||||||||||    
T  36348842 tcaaaaaacttacttgattttgtgcttgaaattggcttggaatgatttatgctttgtgaaattcacatctatggaagc-aaaaaacgtaacaatggagtt 36348744  T
Q  225 ttggtaactcctatgctgttttgttcat 252  Q
    |||| ||||||||||||||| |||||||    
T  36348743 ttggaaactcctatgctgttctgttcat 36348716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 1696387 - 1696611
Alignment:
Q  26 taaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggatt 125  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||          ||| |||||||||||||||||||||| |||||||||||    
T  1696387 taaactatcataacatcataaaatcaatatacctctataatcgcaatttaaccaaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaataggatt 1696485  T
Q  126 caaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagttt 225  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||  || |||||||| ||||||||||||||       |||||||| |||||||    
T  1696486 caaaaaacttaattgattttgtgcttgaaattgacttggaatggcttattcttcgtgaaattcgcacctatggaagc-aaaaaacgtaacaaaggagttt 1696584  T
Q  226 tggtaactcctatgctgttttgttcat 252  Q
    ||| ||||||||||||||| |||||||    
T  1696585 tggaaactcctatgctgttatgttcat 1696611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 40937081 - 40937245
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| |||||||    
T  40937081 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaatag 40937179  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatt 187  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  40937180 gattcaaaaaacttacttgattttgtgcttgaaattggcttggatagacttatgctttgtgaaatt 40937245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 6792032 - 6791857
Alignment:
Q  26 taaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggatt 125  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||          ||| ||||| |||||||||||||||| |||||||||||    
T  6792032 taaactatcggaacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaa-ctaacaaattaatcacaaaatagcaatgcaataggatt 6791934  T
Q  126 caaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| ||||||||| ||||    
T  6791933 caaaaaacttacttgattttgtgcttgaaattggcttagaatgacttatgctttatgaaattcgcacctatgaaagc 6791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 4722642 - 4722512
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  4722642 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaatag 4722543  T
Q  122 gattcaa-aaaacttacttgattttgtgctt 151  Q
    ||||||| |||||||||||||||||||||||    
T  4722542 gattcaaaaaaacttacttgattttgtgctt 4722512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 170
Target Start/End: Original strand, 1973018 - 1973164
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||| ||||| | |          ||| |||||||||||||||||||||| || ||||    
T  1973018 aacccaaactatcataatatcataaaatcaataaacctatataatcacaattaaccaaaaaaaa--ctaacaaatcaatcacaaaatagcaatgccatag 1973115  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  1973116 gattcaaaaaatttacttgattttgtgcttgaaattagcttggaatggc 1973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 6018 - 5961
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  6018 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 5961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 18309894 - 18309963
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  18309894 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggc 18309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 25499713 - 25499785
Alignment:
Q  90 atcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    ||||| |||| ||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  25499713 atcaattcaaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggctt 25499785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 11357238 - 11357187
Alignment:
Q  26 taaactatcataacatcataaaatcaataaacctctataatcgcaatttaac 77  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  11357238 taaactataataacatcataaaatcaataaatctctataatcgcaatttaac 11357187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 23190674 - 23190751
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctta 173  Q
    |||||||||||| | ||| ||||||||||   || ||||||||| |||||||||||||||||||||| ||||||||||    
T  23190674 tcaatcacaaaacaacaatgcaataggatgataacaacttacttaattttgtgcttgaaattggcttggaatggctta 23190751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 38855562 - 38855619
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  38855562 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 38855619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 541160 - 541093
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||    
T  541160 cacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatg 541093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 11028855 - 11028902
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  11028855 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggctt 11028902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 11357002 - 11357053
Alignment:
Q  26 taaactatcataacatcataaaatcaataaacctctataatcgcaatttaac 77  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  11357002 taaactataataacatcataaaatcaataaatctctataattgcaatttaac 11357053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 41201964 - 41201893
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||| |||||||||||||  ||||||| |||||||||||||| ||||||||    
T  41201964 cacaaaacaacaatgcaataggatttaaaaaacttacttatttttgtgattgaaattggcttaaaatggctt 41201893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 8574943 - 8574886
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  8574943 gcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 8574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 19035460 - 19035403
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  19035460 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 19035403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 20199994 - 20200063
Alignment:
Q  99 atcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||| | ||| |||||| ||||||||||| ||||||| ||||||| ||||||||||||| |||||    
T  20199994 atcacaaaacaacaatgcaataagattcaaaaaatttacttgtttttgtgattgaaattggcttggaatg 20200063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 27660162 - 27660105
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  27660162 gcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 27660105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 3603009 - 3603064
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    |||||| |||||||| |||||||||| ||||||| ||||||||||||| |||||||    
T  3603009 gcaatatgattcaaagaacttacttgtttttgtgattgaaattggcttggaatggc 3603064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 8539394 - 8539447
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| || |||||    
T  8539394 gcaataggattcaaaaaacttacttgtttttgtgattggaattggtttggaatg 8539447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 8539490 - 8539527
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8539490 aacaatggagttttggaaactcctatgctgttttgttc 8539527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 11348352 - 11348409
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||| ||||||||| ||||||| ||||||||||||| |||| ||||    
T  11348352 gcaataggattaaaaacacttacttgtttttgtgattgaaattggcttggaatagctt 11348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 1973203 - 1973245
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatgctgttttgttcat 252  Q
    ||||||||||||||||||| |||||||| |||||| |||||||    
T  1973203 cgtaacaatggagttttggaaactcctacgctgttctgttcat 1973245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 11348449 - 11348486
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  11348449 aacaatggagttttggaaactcctatgctgttctgttc 11348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 41799029 - 41798988
Alignment:
Q  127 aaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||| ||||||| ||||||||||||| |||||    
T  41799029 aaaaaacttacttgtttttgtgattgaaattggcttggaatg 41798988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 30711012 - 30711068
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||| |||||||||||||||||| ||||||  || ||||||||||  ||||||||    
T  30711012 caatagaattcaaaaaacttacttgtttttgttattaaaattggcttgtaatggctt 30711068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 34682493 - 34682437
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaatt 157  Q
    ||||||| | ||| ||||||| |||||||||||||||||| | ||||| ||||||||    
T  34682493 cacaaaacaacaatgcaatagaattcaaaaaacttacttgttcttgtgattgaaatt 34682437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 22 - 257
Target Start/End: Original strand, 22292494 - 22292728
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||          ||||||||||||||||||||||||||||||||||    
T  22292494 aacctaaactatcataacatcataaaatcaataaaactctataatcacaatttaacaaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaatag 22292593  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||       ||||||||||||    
T  22292594 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 22292692  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
     |||||| |||||||||| |||||||||||| ||||    
T  22292693 tttttggaaactcctatgttgttttgttcatatcac 22292728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 20876630 - 20876401
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||| |||||| ||| |||||||    
T  20876630 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaaactaacaaatcaatcaaaaaataacaatgcaatag 20876531  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||       ||||||||||||    
T  20876530 gattcaaaaaacttacttgattttgtgcttggaattggcttggaatggcttatgctttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 20876432  T
Q  222 gttttggtaactcctatgctgttttgttcat 252  Q
    ||||||| ||||||||| ||||| |||||||    
T  20876431 gttttggaaactcctatcctgttatgttcat 20876401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 43349953 - 43349721
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||          ||||||||||||||| ||| ||||||||||||||    
T  43349953 aacctaaactatcataacatcataaaatcaataaacctctataatcacaatataaccaaaaaaaa-ctatcaaatcaatcataaa-tagcaacgcaatag 43349856  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |       ||||||||||||    
T  43349855 gattcaaaaaacttacttgattttgtgcttgaaattggcttcgaatggcttatggtttgtgaaattcgcacctatggaa-ccaaaaaacgtaacaatgga 43349757  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||| |||||||||| ||| |||||||| ||||    
T  43349756 gttttggaaactcctatgttgtgttgttcatatcac 43349721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 257
Target Start/End: Original strand, 17184832 - 17185061
Alignment:
Q  25 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggat 124  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||| || | ||||    
T  17184832 ctaaactatcataacatcataaaatcaacaaacctctataatcgcaatttaacaaaaaaaa--ctatcaaatcaatcacaaaatagcaacacagttggat 17184929  T
Q  125 tcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagtt 224  Q
    || ||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||        ||||||||||||||    
T  17184930 tcgaaaaacttaattgattttgtgattgaaattggcttggaatggcttatagtttgtgaaattcgcacctatggaagcaaaaaat-gtaacaatggagtt 17185028  T
Q  225 ttggtaactcctatgctgttttgttcatctcac 257  Q
    |||| ||||||||||||||||||||||| ||||    
T  17185029 ttggaaactcctatgctgttttgttcatatcac 17185061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 42736630 - 42736856
Alignment:
Q  25 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggat 124  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||          ||| |||||||||||||| ||| ||| |||||| |||    
T  42736630 ctaaactatcataacatcataaaatcaataaacctatctaatcgcaatttaaccaaaaaaaa-ctaacaaatcaatcacaatataacaatgcaataagat 42736728  T
Q  125 tcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagtt 224  Q
    | |||||||||||||||||||||||||||||||||||| |||||||| ||| ||  |||||   ||||||  | || |       |||||||||||||||    
T  42736729 taaaaaaacttacttgattttgtgcttgaaattggcttggaatggctgatgtttgctgaaaaacgcacctgagaaatcaaaaaaacgtaacaatggagtt 42736828  T
Q  225 ttggtaactcctatgctgttttgttcat 252  Q
    |||| |||||| |||||||| |||||||    
T  42736829 ttggaaactccgatgctgttctgttcat 42736856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 2205821 - 2205767
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2205821 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaa 2205767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 4231088 - 4231187
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcaccta 195  Q
    |||||||||||| ||||| ||||||||||   || |||||||||||||||||||||||||||||||| ||||| |||||| || |||||| | |||||||    
T  4231088 tcaatcacaaaacagcaatgcaataggatgataacaacttacttgattttgtgcttgaaattggcttggaatgacttatgcttggtgaaaatcgcaccta 4231187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 1641117 - 1641042
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    |||||||||||| | ||| |||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  1641117 tcaatcacaaaaaaccaatgcaatatgattcaaaacacttacttgattttgtgattgaaattggcttggaatggct 1641042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 46860737 - 46860671
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaat 167  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  46860737 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttagaat 46860671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 10524182 - 10524235
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  10524182 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 10524235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 21185861 - 21185800
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    ||||||||| ||| |||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  21185861 cacaaaataacaatgcaataggattcaaaaaacttatttgtttttgtgattgaaattggctt 21185800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 34142509 - 34142566
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||    
T  34142509 gcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctt 34142566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 48272308 - 48272361
Alignment:
Q  117 aataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  48272308 aataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggc 48272361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 28113019 - 28112952
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  28113019 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 28112952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 36392362 - 36392295
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||    
T  36392362 cacaaaacaacaatgcaataggattctaaaaacttacttgtttttgtgattgaaattggcttggaatg 36392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 45257881 - 45257928
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  45257881 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggctt 45257928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 17840741 - 17840794
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  17840741 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggattggaatg 17840794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 20566184 - 20566241
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  20566184 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 20566241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 40590400 - 40590457
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| ||||| | ||||||||||||| |||||||||    
T  40590400 gcaataggattaaaaaaacttacttgtttttgcgattgaaattggcttggaatggctt 40590457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 48314899 - 48314830
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    ||||||| | ||| |||||| ||||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  48314899 cacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaatttgcttggaatggc 48314830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 33603442 - 33603370
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||| ||||||| ||||| |||||||||||| ||||| ||||||| ||||||| ||||||||| ||| |||||    
T  33603442 tcaaccacaaaacagcaatgcaataggattctaaaaatttacttgtttttgtgattgaaattgacttggaatg 33603370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 15070577 - 15070530
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  15070577 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggctt 15070530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 15309812 - 15309879
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| |||| |||||||||||||| ||||||| ||||||||||||| |||||    
T  15309812 cacaaaacaacaatgcaataagattaaaaaaacttacttgtttttgtgattgaaattggcttggaatg 15309879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 41623735 - 41623778
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattg 158  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  41623735 gcaataggattcaaaaaacttacttgtttttgtgattgaaattg 41623778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 48194468 - 48194539
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||||| |||||||||||| ||||||| |||||||| |||| |||| ||||    
T  48194468 cacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattcgcttggaatagctt 48194539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 9365898 - 9365844
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  9365898 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 9365844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 15899928 - 15899871
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaa--cctctataatcgcaatttaac 77  Q
    |||||||| ||||||||||||||||||||||||||   |||||||||| |||||||||    
T  15899928 aacctaaattatcataacatcataaaatcaataaatctctctataatcacaatttaac 15899871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 42684044 - 42684113
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    ||||||| | ||| ||||||||||| |||||||||||||  ||||||| |||||||||| || |||||||    
T  42684044 cacaaaacaacaatgcaataggattaaaaaaacttacttatttttgtgattgaaattggtttggaatggc 42684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 45361846 - 45361789
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| ||| |||||||||||||| |||| || |||||||||| ||||||||||||    
T  45361846 gcaatagaattaaaaaaacttacttgtttttatgattgaaattggtttagaatggctt 45361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 28977799 - 28977727
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||| ||||||| | ||| ||||||||||| |||||||||||||| || |||| |||||||||| || |||||    
T  28977799 tcaaccacaaaacaacaatgcaataggattaaaaaaacttacttgtttatgtgattgaaattggattggaatg 28977727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 42504039 - 42503996
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattg 158  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||    
T  42504039 gcaataggattaaaaaaacttacttgtttttgtgattgaaattg 42503996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 46597120 - 46597051
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||| |||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  46597120 cacaaaacaacaatgcaataggatt-aaaaaacttagttgtttttgtgattgaaattggctt-gaatggctt 46597051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 45257978 - 45258015
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  45257978 aacaatgaagttttggaaactcctatgctgttttgttc 45258015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 39855805 - 39855571
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||    
T  39855805 aacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacaaaaaaaaa-ctatcaaatcaatcacaaaatagcaacgcaatag 39855707  T
Q  122 gattcaaaaaacttacttga-ttttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgg 220  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||       |||||||||||    
T  39855706 gattcaaaaaacttacttgatttttgtgcttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgg 39855608  T
Q  221 agttttggtaactcctatgctgttttgttcatctcac 257  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  39855607 agttttggaaactcctatgctgttttgttcatatcac 39855571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 257
Target Start/End: Complemental strand, 38043763 - 38043532
Alignment:
Q  25 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggat 124  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||||||||||||||||||||||||||    
T  38043763 ctaaactatcataacatcataaaatcaataaacctctataatcacaatttaacaaaaaaaaaaatatcaaatcaatcacaaaatagcaacgcaataggat 38043664  T
Q  125 tcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagtt 224  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||       |||||||||||||||    
T  38043663 tcaaaaaacttacttgattttgtgtttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatggagtt 38043565  T
Q  225 ttggtaactcctatgctgttttgttcatctcac 257  Q
    |||| |||||||||| ||| |||||||| ||||    
T  38043564 ttggaaactcctatgttgtgttgttcatatcac 38043532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 252
Target Start/End: Original strand, 23344162 - 23344392
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn-ctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||| ||||||    
T  23344162 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaaaactaacaaatcaatcacaaaatagcaatgcaata 23344261  T
Q  121 ggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgg 220  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||       ||||||||||     
T  23344262 gaattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatgctttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatga 23344360  T
Q  221 agttttggtaactcctatgctgttttgttcat 252  Q
    |||||||| |||||||||| |||| |||||||    
T  23344361 agttttggaaactcctatgttgttctgttcat 23344392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 252
Target Start/End: Complemental strand, 40532009 - 40531785
Alignment:
Q  25 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggat 124  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  40532009 ctaaattatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaa--ctaacaaatcaatcacaaaatagcaatgcaatatgat 40531912  T
Q  125 tcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagtt 224  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||| | |||| ||||||||||| ||||||||||||||       ||||||||| |||||    
T  40531911 tcaaaaaacttacttgattttatgcttgaatttggcgtagaatgacgtatgctttgtgaaattcgcacctatggaagc-aaaacacgtaacaatagagtt 40531813  T
Q  225 ttggtaactcctatgctgttttgttcat 252  Q
    |||| |||||||||| |||| |||||||    
T  40531812 ttggaaactcctatgttgttatgttcat 40531785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 33285936 - 33285778
Alignment:
Q  92 caaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgca 191  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| |||    
T  33285936 caaatcaatcaaaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatgcattgtgaaattcgca 33285837  T
Q  192 cctatggaagcnnnnnnncgtaacaatggagttttggtaactcctatgctgttttgttca 251  Q
    |||||||||||       ||||||||||||||||||| ||||||||||||||| ||||||    
T  33285836 cctatggaagc-aaaaaacgtaacaatggagttttggaaactcctatgctgttctgttca 33285778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 252
Target Start/End: Original strand, 14440792 - 14441021
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn-ctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||           ||| |||||||||||||||||| ||| ||||||    
T  14440792 aacctaaactataataacatcataaaatcaataaatctctataatcgcaatttaacaaaaaaaaaaactaacaaatcaatcacaaaataacaatgcaata 14440891  T
Q  121 ggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgg 220  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||  | || |       | ||||| |||    
T  14440892 ggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatgctt-gtgaaattcgcacctgagaaatccaaaaa-cataacagtgg 14440989  T
Q  221 agttttggtaactcctatgctgttttgttcat 252  Q
    |||||||| |||||||||| ||||||||||||    
T  14440990 agttttggaaactcctatgttgttttgttcat 14441021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 49260243 - 49260094
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||          ||| |||||||||||||||||||||| ||||||     
T  49260243 aacctaaactgtcataacatcataaaatcaataaacctatataatcgcaatttaacccaaaaaaaactaacaaatcaatcacaaaatagcaatgcaatat 49260144  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49260143 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggct 49260094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 15355347 - 15355217
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| |||||||    
T  15355347 aacctaaactatcaaaacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaaactaacaaatcaatcacaaaatagcaatgcaatag 15355248  T
Q  122 gattcaaaaaacttacttgattttgtgcttg 152  Q
    ||||||||||| ||| |||||||||||||||    
T  15355247 gattcaaaaaatttatttgattttgtgcttg 15355217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 12789910 - 12789795
Alignment:
Q  136 acttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagttttggtaactcc 235  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||       ||||||||||||||||||| ||||||    
T  12789910 acttgattttgtgcttgaaattggcttggaatggcttatgctttgtgaaattcgcacctatgaaagc-aaaaaacgtaacaatggagttttggaaactcc 12789812  T
Q  236 tatgctgttttgttcat 252  Q
    ||| ||||| |||||||    
T  12789811 tattctgttctgttcat 12789795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 37779758 - 37779884
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||          ||| |||||||||||||||||||||| | |||||    
T  37779758 aacctaaactatcataatatcataaaatcaataaacctctataatcgcaattcaacaaaaaaaaaactaacaaatcaatcacaaaatagcaatgtaatag 37779857  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||||||||||||||||||    
T  37779858 gatggtaacaacttacttgattttgtg 37779884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 39063527 - 39063400
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaa-cctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||           || |||||||||||||||||||||| | ||||    
T  39063527 aacctaaactatcgtaacatcataagatcaataaaacctctataatcgtaatttaaccaaaaaaaaattaacaaatcaatcacaaaatagcaatgtaata 39063428  T
Q  121 ggattcaaaaaacttacttgattttgtg 148  Q
    |||||  || ||||||||||||||||||    
T  39063427 ggattataacaacttacttgattttgtg 39063400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 24268933 - 24268878
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac 77  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24268933 aacctaaactatcataacatcataaaatcaataaatccctataatcgcaatttaac 24268878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 19162114 - 19162057
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  19162114 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 19162057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 44336472 - 44336415
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  44336472 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 44336415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 14172324 - 14172256
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatgg 169  Q
    ||||||| | ||| ||||||||||||||||||||||| || ||||||| ||||||||||||| ||||||    
T  14172324 cacaaaacaacaatgcaataggattcaaaaaacttacctgtttttgtgattgaaattggcttggaatgg 14172256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 41803788 - 41803937
Alignment:
Q  22 aacctaaactatcataacat--cataaaatcaataaa-cctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaa 118  Q
    ||||||||||||| ||||||  ||||||||||||||| ||| |||||||| ||||||||          | | ||| || | ||||||| | ||| ||||    
T  41803788 aacctaaactatcctaacatatcataaaatcaataaaacctatataatcgaaatttaacaaaaaaaaaacaaacaattcgaccacaaaacaacaatgcaa 41803887  T
Q  119 taggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| |||||    
T  41803888 taggattcaaaaaacttacttatttttgtgattgaaattggcttggaatg 41803937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 13634088 - 13634041
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13634088 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggctt 13634041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 18974967 - 18975034
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| | ||||||||||| |||||    
T  18974967 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgatcgaaattggcttggaatg 18975034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 49925093 - 49925026
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||    
T  49925093 cacaaaacaacaatgcaataggattcaaaaatcttacttgtttttgtgattgaaattggcttggaatg 49925026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 51271427 - 51271494
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||    
T  51271427 cacaaaacaacaatgcaataggattcataaaacttacttgtttttgtgattgaaattggcttggaatg 51271494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 46142003 - 46141937
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaat 167  Q
    ||||||| | ||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||    
T  46142003 cacaaaacaacaatgcaataggattcaaaaaactcacttgtttttgtgattgaaattggcttggaat 46141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 14771369 - 14771288
Alignment:
Q  92 caaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctta 173  Q
    |||||||||||||||| || || | ||||||||   |  |||||||||||||||||||||||||||||||| ||||| ||||    
T  14771369 caaatcaatcacaaaacagaaatgtaataggatgatatcaacttacttgattttgtgcttgaaattggcttggaatgactta 14771288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 29760726 - 29760673
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| |||||||||||||  ||||||| |||||||||||||||||||    
T  29760726 gcaataggattaaaaaaacttacttctttttgtgattgaaattggcttagaatg 29760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 35186660 - 35186697
Alignment:
Q  40 atcataaaatcaataaacctctataatcgcaatttaac 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35186660 atcataaaatcaataaacctctataatcgcaatttaac 35186697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 35585469 - 35585432
Alignment:
Q  40 atcataaaatcaataaacctctataatcgcaatttaac 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35585469 atcataaaatcaataaacctctataatcgcaatttaac 35585432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 49398305 - 49398374
Alignment:
Q  99 atcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||| | ||| |||||| ||||||||||||||||||| ||||||| |||||||||| || |||||    
T  49398305 atcacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 49398374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 6437376 - 6437447
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| |||||||||||||||||| ||||||| ||||||| ||||||||| |||  ||||||||    
T  6437376 cacaaaacaacaatgcaataggattcaaaaaatttacttgtttttgtgattgaaattgacttgtaatggctt 6437447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 17373818 - 17373893
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    ||||| |||||| | ||| | |||||||||||||| |||||||||||||| |||||||||||| ||  ||||||||    
T  17373818 tcaataacaaaaaatcaatgtaataggattcaaaacacttacttgattttttgcttgaaattgactcggaatggct 17373893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 26633764 - 26633697
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||| |||||||||| ||| ||||||| ||||||||||||| |||||    
T  26633764 cacaaaacaacaatgcaataggattaaaaaaacttagttgtttttgtgattgaaattggcttggaatg 26633697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 27485277 - 27485199
Alignment:
Q  93 aaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||||| | ||| ||||||||||| |||||| ||||||| ||||||| ||||||||||||| |||||||||    
T  27485277 aaatcaaccgcaaaacaacaatgcaataggattaaaaaaa-ttacttgtttttgtgattgaaattggcttggaatggctt 27485199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 36911532 - 36911603
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| |||||| |||||||||||||||| || ||||||| |||||||||||||  ||||||||    
T  36911532 cacaaaacaacaatgcaataagattcaaaaaacttacctgtttttgtgattgaaattggcttgaaatggctt 36911603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 42570359 - 42570292
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| ||||||||||||||||||| ||||||| ||||||||| ||| |||||    
T  42570359 cacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattgactttgaatg 42570292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 49429022 - 49429065
Alignment:
Q  125 tcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  49429022 tcaaaaaacttacttgtttttgtgattgaaattggcttagaatg 49429065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 13148904 - 13148949
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggc 160  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||    
T  13148904 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggc 13148949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 19261107 - 19261022
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaa 200  Q
    ||||||||||||||   |||||||||||||| || ||| ||||||||| |||||||||| | || |||| | | ||||||||||||    
T  19261107 gcaataggattcaatgcacttacttgattttatgtttgtaattggcttggaatggcttaagcttggtgagaatcgcacctatggaa 19261022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 35524965 - 35524904
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    ||||||| ||||| |||||||||||||||||||||| ||  ||||||| || ||||||||||    
T  35524965 cacaaaacagcaatgcaataggattcaaaaaacttaattatttttgtgatttaaattggctt 35524904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 44598756 - 44598809
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| |||||||||||||| ||||||  ||||||||||||| |||||    
T  44598756 gcaataggattaaaaaaacttacttgtttttgttattgaaattggcttggaatg 44598809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 24268857 - 24268801
Alignment:
Q  92 caaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtg 148  Q
    |||||||||||||||||||||| | ||||||||   || ||||||||||||||||||    
T  24268857 caaatcaatcacaaaatagcaatgtaataggatggtaacaacttacttgattttgtg 24268801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 13285197 - 13285240
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattg 158  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||    
T  13285197 gcaatagaattcaaaacacttacttgattttgtgattgaaattg 13285240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 49260057 - 49260015
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatgctgttttgttcat 252  Q
    ||||||||||||||||||| |||| |||||||||| |||||||    
T  49260057 cgtaacaatggagttttggaaactgctatgctgttctgttcat 49260015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 49429109 - 49429146
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  49429109 aacaatggagttttggaaactcctatgctgttatgttc 49429146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 16530797 - 16530741
Alignment:
Q  92 caaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtg 148  Q
    |||||||||||||||||||||| | ||||||||   || ||||||| ||||||||||    
T  16530797 caaatcaatcacaaaatagcaatgtaataggatggtaacaacttacatgattttgtg 16530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 17684800 - 17684744
Alignment:
Q  92 caaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtg 148  Q
    ||||||||||| |||||||||| | ||||||||   || ||||||||||||||||||    
T  17684800 caaatcaatcagaaaatagcaatgtaataggatggtaacaacttacttgattttgtg 17684744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 5e-71; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 26 - 257
Target Start/End: Original strand, 5421982 - 5422212
Alignment:
Q  26 taaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggatt 125  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||          |||||||||||||||||||||||||||||||||| |||    
T  5421982 taaactatcataacatcataaaatcaataaacctctagaatcacaatttaaccaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaatagaatt 5422081  T
Q  126 caaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagttt 225  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||    
T  5422082 caaaaaacttacttgattttgtgcttgaaattggcttgaaatggcttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatggagttt 5422180  T
Q  226 tggtaactcctatgctgttttgttcatctcac 257  Q
    ||  |||||||||| |||||||||||| ||||    
T  5422181 tgaaaactcctatgttgttttgttcatatcac 5422212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 37311276 - 37311049
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||||    
T  37311276 aaccttaactatcataacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaa--ctaacaaatcaatcacaaaatagcaatgcaatag 37311179  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    |||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||       ||||||||||||    
T  37311178 gattcagaaaacttacttgattttgtgcttgaaattggcttggattggcttatgctttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 37311080  T
Q  222 gttttggtaactcctatgctgttttgttcat 252  Q
     |||||| |||||||||| |||| |||||||    
T  37311079 tttttggaaactcctatgttgttctgttcat 37311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 23719662 - 23719432
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn-ctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           ||| |||| ||||||||||||||||| ||||||    
T  23719662 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttcaccaaaaaaaaaactaacaaaccaatcacaaaatagcaatgcaata 23719563  T
Q  121 ggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgg 220  Q
    ||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||  ||||||||||| ||||||| ||||||       |||||||||||    
T  23719562 ggactcaaaaaacttacttaattttgtgcttgaaattggcttggaatgacttatactttgtgaaattcgcacctacggaagc-aaaaaacgtaacaatgg 23719464  T
Q  221 agttttggtaactcctatgctgttttgttcat 252  Q
    |||||||| |||||||||| |||| |||||||    
T  23719463 agttttggaaactcctatgttgttatgttcat 23719432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 24107334 - 24107104
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn-ctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           ||| |||| ||||||||||||||||| ||||||    
T  24107334 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttcaccaaaaaaaaaactaacaaaccaatcacaaaatagcaatgcaata 24107235  T
Q  121 ggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgg 220  Q
    ||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||  ||||||||||| ||||||| ||||||       |||||||||||    
T  24107234 ggactcaaaaaacttacttaattttgtgcttgaaattggcttggaatgacttatactttgtgaaattcgcacctacggaagc-aaaaaacgtaacaatgg 24107136  T
Q  221 agttttggtaactcctatgctgttttgttcat 252  Q
    |||||||| |||||||||| |||| |||||||    
T  24107135 agttttggaaactcctatgttgttatgttcat 24107104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 17537470 - 17537290
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||          ||| ||||||||||||||||| |||| |||||||    
T  17537470 aacctaaactatcaaaacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaaactaacaaatcaatcacaaaattgcaatgcaatag 17537371  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||| |||||| | ||||||||| ||||||||||||||    
T  17537370 gattcacaaaacttacttgattttgtgcttgaaattagcttggaatgacttatgctctgtgaaattcgcacctatggaagc 17537290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 34520279 - 34520132
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||            || |||||||||||||||||||||| |||||||    
T  34520279 aacctaaactatcataacatcataaaataaataaacctatataatcgcgatttaatcaaaaaaat--taacaaatcaatcacaaaatagcaatgcaatag 34520182  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  34520181 gattcaaaaaacttacttgattttgtgcttgaaattagcttggaatggct 34520132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 10359113 - 10358963
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn--ctatcaaatcaatcacaaaatagcaacgcaat 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||            ||| ||||||||||||||| |||||| |||||    
T  10359113 aacctaaactatcataacatcataaaatcaataaacctatataa-cgcaatttaacaaaaaaaaaaaactaacaaatcaatcacaaattagcaatgcaat 10359015  T
Q  120 aggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  10359014 aggattcaaaaaacttacttgattttgtgtttgaaattggcttggaatggct 10358963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 33405472 - 33405528
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaat-aaacctctataatcgcaatttaac 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33405472 aacctaaactatcataacatcataaaatcaataaaacctctataatcgcaatttaac 33405528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 8268601 - 8268657
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8268601 caatagaattcaaaaaacttacttgtttttgtgattgaaattggcttagaatggctt 8268657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 14181684 - 14181740
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  14181684 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggct 14181740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 43493121 - 43493192
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||    
T  43493121 cacaaaacaacaatgcaataggattcaaaaaacttgcttgtttttgtgattgaaattggcttggaatggctt 43493192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 39798665 - 39798607
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctta 173  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  |||||||||    
T  39798665 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctta 39798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 6978477 - 6978604
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac-nnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||           ||| |||||||||||||||||||||| | ||||    
T  6978477 aacctaaactttcataacatcaaaaaatcaataaatctctataatcgcaacttaacaaaaaaaaaaactaacaaatcaatcacaaaatagcaatgtaata 6978576  T
Q  121 ggattcaaaaaacttacttgattttgtg 148  Q
    ||||    | ||||||||||||||||||    
T  6978577 ggatgatgacaacttacttgattttgtg 6978604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 22003252 - 22003309
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  22003252 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 22003309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 23409341 - 23409410
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||    
T  23409341 cacaaaacaacaatgcaataggattcaaaaaacttacttg--tttgtgattgaaattggcttggaatggctt 23409410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 35493178 - 35493245
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||    
T  35493178 cacaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatg 35493245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 40675973 - 40675906
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||    
T  40675973 cacaaaacaacaatgcaataggattcaaaaaactgacttgtttttgtgattgaaattggcttggaatg 40675906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 29090799 - 29090745
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatgg 169  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||    
T  29090799 gcaataggattaaaaaaacttacttgtttttgtggttgaaattggcttggaatgg 29090745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 2917893 - 2917840
Alignment:
Q  117 aataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||| |||||||    
T  2917893 aataggattcaaaacatttacttgtttttgtgcttgaaattggcttggaatggc 2917840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 3936085 - 3936028
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  3936085 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 3936028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 17426216 - 17426273
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  17426216 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 17426273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 41497695 - 41497642
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||| |||||    
T  41497695 gcaataggattcaaaaaacttacttatttttgtgattgaaattggctttgaatg 41497642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 23786362 - 23786295
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||| | |||||||||||| ||||||| ||||||||||||| |||||    
T  23786362 cacaaaacaacaatgcaataggatttagaaaacttacttgtttttgtgattgaaattggcttggaatg 23786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 43984155 - 43984209
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  43984155 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 43984209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 3943041 - 3943094
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| |||||| ||||||| ||||||| ||||||||||||| |||||    
T  3943041 gcaataggattaaaaaaatttacttgtttttgtgattgaaattggcttggaatg 3943094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 28476922 - 28476975
Alignment:
Q  119 taggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||  ||||||||    
T  28476922 taggattcacaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 28476975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 16583444 - 16583498
Alignment:
Q  115 gcaataggattcaaaa-aacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| |||| |||||||||| ||||||| ||||||||||||| |||||    
T  16583444 gcaataggattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatg 16583498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 34520094 - 34520052
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatgctgttttgttcat 252  Q
    |||||||||||| |||||| ||||||||||||||| |||||||    
T  34520094 cgtaacaatggatttttggaaactcctatgctgttctgttcat 34520052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 34639176 - 34639221
Alignment:
Q  127 aaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||| ||||||  ||||||||||||| |||||||||    
T  34639176 aaaaaacttacttgtttttgttattgaaattggcttggaatggctt 34639221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 257
Target Start/End: Original strand, 12398443 - 12398676
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||          ||||||||||||||||||||||||||| ||||||    
T  12398443 aacctaaactatcataacatcataaaatcaataaacttctataatcacaatttaacaaaaaaaaa-ctatcaaatcaatcacaaaatagcaacacaatag 12398541  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||||||       ||||||||||||    
T  12398542 gattcaaaaaacttacttgattttgtgcttgaaattggctttgaatggcttatggtttgtaaatttcgcacctatggaagc-aataaacgtaacaatgga 12398640  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||  ||||||||||||||||||||||| ||||    
T  12398641 gttttgaaaactcctatgctgttttgttcatatcac 12398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 32133183 - 32133057
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||          ||| |||||||||||||||||||||| | |||||    
T  32133183 aacctaaactatcataacatcataaaatcaaaaatcttctataatcgcaatttaacaaaaaaaaacctaacaaatcaatcacaaaatagcaatgtaatag 32133084  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||||||||||||||||||    
T  32133083 gatgataacaacttacttgattttgtg 32133057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 30763539 - 30763462
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcac 192  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||| | || |||||| ||||||    
T  30763539 gcaataggattcaaaacacttacttgattttgtgcttgtaattggcttggaatgacttaagcttggtgaaaattgcac 30763462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 35019813 - 35019746
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  35019813 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 35019746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 13616463 - 13616406
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  13616463 gcaataggatttaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 13616406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 32026183 - 32026127
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||    
T  32026183 caataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatagctt 32026127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 27641569 - 27641626
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  27641569 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 27641626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 13404469 - 13404536
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| || ||||||| || |||||    
T  13404469 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgatttaaattggattggaatg 13404536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 6206914 - 6206968
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  6206914 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 6206968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 11693881 - 11693935
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  11693881 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 11693935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 32691406 - 32691360
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||    
T  32691406 caataggattcaaaaaacttacttgtttttgtgattaaaattggctt 32691360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 34801727 - 34801669
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattt-tgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||  ||| |||| ||||||||||||| |||||||||    
T  34801727 gcaataggattcaaaaaacttactttttttgtgtgattgaaattggcttggaatggctt 34801669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 29068116 - 29068173
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||||  ||||||||    
T  29068116 gcaatagaattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggctt 29068173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 29083363 - 29083420
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||||  ||||||||    
T  29083363 gcaatagaattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggctt 29083420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 14124556 - 14124626
Alignment:
Q  102 acaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||| | ||| |||||| |||||| || || |||||| ||||||| ||||||||||||| |||||||||    
T  14124556 acaaaacaacaatgcaataagattcagaacacgtacttgtttttgtgattgaaattggcttggaatggctt 14124626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 29076174 - 29076227
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||| || |||||    
T  29076174 gcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatg 29076227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 29076268 - 29076309
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatg-ctgttttgttc 250  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  29076268 cgtaacaatggagttttggaaactcctatgtctgttttgttc 29076309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 29109707 - 29109760
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||| || |||||    
T  29109707 gcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatg 29109760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 29109801 - 29109842
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatg-ctgttttgttc 250  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  29109801 cgtaacaatggagttttggaaactcctatgtctgttttgttc 29109842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 29111147 - 29111200
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||| || |||||    
T  29111147 gcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatg 29111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 29111241 - 29111282
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatg-ctgttttgttc 250  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  29111241 cgtaacaatggagttttggaaactcctatgtctgttttgttc 29111282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 8e-70; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 36775024 - 36774796
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| |||||||    
T  36775024 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaatag 36774926  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
     ||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||||||       ||||||||||||    
T  36774925 aattcaaaaaacttacttgattttgtgcttgaaattcgcttggaatggcttatgctttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 36774827  T
Q  222 gttttggtaactcctatgctgttttgttcat 252  Q
    ||||||| ||||||||||||||| |||||||    
T  36774826 gttttggaaactcctatgctgttatgttcat 36774796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 257
Target Start/End: Original strand, 22438279 - 22438511
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||| ||||||| ||||||    
T  22438279 aacctaaactatcataacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaa-ctatcaaatcaatcacaaa-tagcaacacaatag 22438376  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||       ||||||||||||    
T  22438377 gattcaaaaaacttacttgattttgtgcttgaaattgtctttgaatggcttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 22438475  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||| |||| ||||||||| |||||||| ||||    
T  22438476 gttttggaaacttctatgctgtcttgttcatatcac 22438511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 2774662 - 2774838
Alignment:
Q  26 taaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggatt 125  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||    
T  2774662 taaactatcataacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaac-ctatcaaatcaatcacaaaatagcaacgcaataggatt 2774760  T
Q  126 caaaa-aacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  2774761 caaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagc 2774838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 43887800 - 43887585
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||                 
T  43887800 aacctaaactctcataacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaa-ctatcaaatcaatcacaaaat------------- 43887715  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||       ||||||||||||    
T  43887714 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatgga 43887616  T
Q  222 gttttggtaactcctatgctgttttgttcat 252  Q
    ||||||| ||||||||||||||| |||||||    
T  43887615 gttttggaaactcctatgctgttctgttcat 43887585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 51026370 - 51026223
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn-ctatcaaatcaatcacaaaatagcaacgcaata 120  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||| ||||||    
T  51026370 aacctaaactatcataacatcataaaatcaataaacctatataatcgcaatttaaccaaaaaaaaaactaacaaatcaatcacaaaatagcaatgcaata 51026271  T
Q  121 ggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  51026270 ggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 51026223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 9718972 - 9719078
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcaccta 195  Q
    |||||||||||| | ||| | |||| |||||||||||||||||||||||| ||||||||||||||||  |||| |||||| |||||||||||||||| ||    
T  9718972 tcaatcacaaaacaacaatgaaataagattcaaaaaacttacttgattttatgcttgaaattggcttgaaatgacttatgctttgtgaaatttgcacata 9719071  T
Q  196 tggaagc 202  Q
    |||||||    
T  9719072 tggaagc 9719078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 2567633 - 2567507
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||| | |||||    
T  2567633 aacctaaactatcataacatcacaaaatcaataaacctctataatcgcaatttaataaaaaaaaagctaacaaatcaatcacaaaatagcaatgtaatag 2567534  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||||||||||||||||||    
T  2567533 gatggtaacaacttacttgattttgtg 2567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 45941163 - 45941289
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||           ||| |||||||||||||||| ||||| | |||||    
T  45941163 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaattcaataaaaaaaaaactaacaaatcaatcacaaaacagcaatgtaatag 45941262  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||| ||||||||||||||    
T  45941263 gatggtaacaacctacttgattttgtg 45941289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 17045391 - 17045336
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac 77  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  17045391 aacctaaactaccataacatcataaaatcaataaacatctataatcgcaatttaac 17045336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 44558885 - 44558818
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  44558885 cacaaaataacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 44558818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 49422326 - 49422255
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  49422326 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 49422255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 51426775 - 51426708
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  51426775 cacaaaacagcaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 51426708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 250
Target Start/End: Complemental strand, 21410374 - 21410219
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcaccta 195  Q
    |||||||||||| | ||| |||| |||  |||||| |||||||||||||||||||||||||||| || |||| ||||||| ||  ||||| |||||||||    
T  21410374 tcaatcacaaaaaaccaatgcaacagggctcaaaacacttacttgattttgtgcttgaaattggtttcgaatagcttatgtttgctgaaaattgcaccta 21410275  T
Q  196 tggaagcnnnnnnncgtaacaatggagttttggtaactcctatg-ctgttttgttc 250  Q
     | |  |       || |||||||||||||||| |||||||||| |||||||||||    
T  21410274 agaattccaaaaaacgcaacaatggagttttggaaactcctatgtctgttttgttc 21410219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 21015961 - 21015904
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  21015961 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 21015904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 10315653 - 10315709
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaat-aaacctctataatcgcaatttaac 77  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  10315653 aacctaaactatcataacatcataaaatccataaaacctctataatcgcaatttaac 10315709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 49572738 - 49572810
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctta 173  Q
    ||||||||| ||| |||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||    
T  49572738 cacaaaataacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgactta 49572810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 956027 - 955956
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| |||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||    
T  956027 cacaaaacaacaatgcaataggattcaaaaaacttacttatttttgtgattgaaattggcttggaatggctt 955956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 49816069 - 49815961
Alignment:
Q  40 atcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttactt 139  Q
    |||||||||||||||||||||||| |||||||||||||          ||  |||||||||||||||||||||| | ||||||||   || |||||||||    
T  49816069 atcataaaatcaataaacctctatgatcgcaatttaacaaaaaaaaaactcacaaatcaatcacaaaatagcaatgtaataggatggtaacaacttactt 49815970  T
Q  140 gattttgtg 148  Q
    |||||||||    
T  49815969 gattttgtg 49815961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 195
Target Start/End: Complemental strand, 4910137 - 4909964
Alignment:
Q  21 aaacctaaactatcataacatcataaaatcaataaa-cctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaat 119  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||| | ||||||           ||  || |||||||||||| | ||| |||||    
T  4910137 aaacctaaactatcataaaatcataaaatcaacaaaacctctataatcgaagtttaacaaaaaaaat--taataattcaatcacaaaacaacaatgcaat 4910040  T
Q  120 aggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcaccta 195  Q
    | |||   || ||||||||||||||||||||||||||| |||| ||||| |||||| || |||||| | |||||||    
T  4910039 aagatgataacaacttacttgattttgtgcttgaaattagcttggaatgacttatgcttggtgaaaatcgcaccta 4909964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 28083841 - 28083894
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  28083841 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 28083894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 56140541 - 56140598
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  56140541 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 56140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 33384041 - 33383974
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  33384041 cacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 33383974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 34528401 - 34528330
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||||| |||||||| ||| ||||||| ||||||||||||| |||||||||    
T  34528401 cacaaaacaacaatgcaataggattcagaaaacttatttgtttttgtgattgaaattggcttggaatggctt 34528330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 37959581 - 37959636
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  37959581 gcaacaggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggc 37959636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 40352558 - 40352501
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  40352558 gcaatagaattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 40352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 41793586 - 41793529
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  41793586 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 41793529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 55799380 - 55799437
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  55799380 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 55799437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 14968788 - 14968661
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaa---cctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaa 118  Q
    |||||||| ||||||||||||||||||||| ||||    ||||||||||||||||||||          ||| |||||||||||||||||| ||| | ||    
T  14968788 aacctaaattatcataacatcataaaatcattaaaacctctctataatcgcaatttaac--aaaaaaaactaacaaatcaatcacaaaatatcaatgtaa 14968691  T
Q  119 taggattcaaaaaacttacttgattttgtg 148  Q
    ||||||   || ||||||||||||||||||    
T  14968690 taggatggtaacaacttacttgattttgtg 14968661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 34151851 - 34151783
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaa-cttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||    
T  34151851 cacaaaacaacaatgcaataggattcaaaaaaacttacttggttttgtgattgaaattggcttggaatg 34151783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 39590404 - 39590475
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| |||||||| |||| |||||||||||| ||||||| ||||||||| ||| |||||||||    
T  39590404 cacaaaacaacaatgcaatagggttcagaaaacttacttgtttttgtgattgaaattgacttggaatggctt 39590475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 6176096 - 6176042
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  6176096 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 6176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 24076712 - 24076770
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctta 173  Q
    |||||||||||||||  ||||||||| ||||||| ||| ||||||||| ||||||||||    
T  24076712 gcaataggattcaaagcacttacttggttttgtgtttgtaattggcttggaatggctta 24076770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 37868100 - 37868166
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    |||||| ||||| | ||| |||||||||||  ||||||||||||| ||||||| |||||||||||||    
T  37868100 tcaatcgcaaaacaacaatgcaataggattacaaaaacttacttgtttttgtgattgaaattggctt 37868166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 49096172 - 49096226
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  49096172 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 49096226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 9491123 - 9491188
Alignment:
Q  103 caaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| ||| ||||||||||| |||||||||||||  ||||||| ||||||||| ||| |||||    
T  9491123 caaaataacaatgcaataggattaaaaaaacttacttatttttgtgattgaaattgacttggaatg 9491188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 21171088 - 21171125
Alignment:
Q  40 atcataaaatcaataaacctctataatcgcaatttaac 77  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21171088 atcataaaatcaataaacatctataatcgcaatttaac 21171125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 6281094 - 6281027
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| |||| |||||||||||||| ||||||| |||||||||| || |||||    
T  6281094 cacaaaacaacaatgcaatatgattaaaaaaacttacttgtttttgtgattgaaattggtttggaatg 6281027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 51026182 - 51026140
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatgctgttttgttcat 252  Q
    ||||||||||||||||||| |||||||||| |||| |||||||    
T  51026182 cgtaacaatggagttttggaaactcctatgttgttctgttcat 51026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 8866975 - 8866890
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaa 200  Q
    |||| ||||||||||  ||||||||||||||||| ||| |||||| || ||||| |||| | || | |||| | ||||||||||||    
T  8866975 gcaaaaggattcaaagcacttacttgattttgtgtttgtaattggtttggaatgacttaagcttggagaaaatcgcacctatggaa 8866890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 28083938 - 28083975
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  28083938 aacaatggagttttggaaactcctatgctgttatgttc 28083975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 10315723 - 10315783
Alignment:
Q  88 ctatcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtg 148  Q
    ||| |||||||||||||||||||||| | ||||||||   || |||||||||||| |||||    
T  10315723 ctaacaaatcaatcacaaaatagcaatgtaataggatggtaacaacttacttgatattgtg 10315783  T

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Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 11377560 - 11377327
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| |    
T  11377560 aacctaaactatcataacatcataaaattaataaacctctataatcgcaatttaaccaaaaaaaa-ctatcaaatcaatcacaaaatagcaacgcaattg 11377462  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatgga 221  Q
    ||||| ||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||       ||||||||| ||    
T  11377461 gattcgaaaaacttaattaattttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctattgaagc-aaaaaacgtaacaattga 11377363  T
Q  222 gttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||| ||||||||||||||||||||||| ||||    
T  11377362 gttttggaaactcctatgctgttttgttcatatcac 11377327  T

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Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 28 - 252
Target Start/End: Complemental strand, 42322037 - 42321814
Alignment:
Q  28 aactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggattca 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||| ||| |||||||||||||    
T  42322037 aactatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaaactaacaaatcaatcacaaaataacaatgcaataggattca 42321938  T
Q  128 aaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatggagttttg 227  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||||| ||||||||||| ||||||||||||||       ||||||||||||||||||    
T  42321937 aaaaacttacttgattttttgctttaaattggcttgaaatggcttatgctttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatggagttttg 42321839  T
Q  228 gtaactcctatgctgttttgttcat 252  Q
    | ||||||||||||||| |||||||    
T  42321838 gaaactcctatgctgttctgttcat 42321814  T

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Target: chr3; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 22 - 257
Target Start/End: Original strand, 44929118 - 44929354
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn--ctatcaaatcaatcacaaaatagcaacgcaat 119  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||            ||||||||||||||||||||||||||| ||||    
T  44929118 aacctaaactatcataacatcataaaaccaataaacctttataatcacaatttaaccaaaaaaaaaaactatcaaatcaatcacaaaatagcaacacaat 44929217  T
Q  120 aggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaatg 219  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||||        |||||||||    
T  44929218 aggattcaaaaaacttacttgattttgtgcttgaaattgacttggaatgacttatgctttgtgaaattcgcacctatggaagcaaaaaat-gtaacaatg 44929316  T
Q  220 gagttttggtaactcctatgctgttttgttcatctcac 257  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  44929317 gagttttggaaactcctatgctgttttgttcatatcac 44929354  T

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Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 252
Target Start/End: Original strand, 51016938 - 51017170
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn---ctatcaaatcaatcacaaaatagcaacgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||| |||||||||||||||||| ||| ||||    
T  51016938 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaaaagactaacaaatcaatcacaaaatatcaatgcaa 51017037  T
Q  119 taggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagcnnnnnnncgtaacaat 218  Q
    |||||||||||||||||||||||||||||||| |||||||| || ||||| |||||| ||||||||||| ||||||||||||||       |||||||||    
T  51017038 taggattcaaaaaacttacttgattttgtgctagaaattggtttggaatgacttatgctttgtgaaattcgcacctatggaagc-aaaaaacgtaacaat 51017136  T
Q  219 ggagttttggtaactcctatgctgttttgttcat 252  Q
    |||||||||| |||||||||| ||||||||||||    
T  51017137 ggagttttggaaactcctatgttgttttgttcat 51017170  T

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Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 10051918 - 10051739
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| ||||||     
T  10051918 aacctaaactatcagaacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaatat 10051820  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10051819 gattcaaaaaccttacttgattttgtgcttgaaattggcttagaatggcttatgctttgtgaaattcgcacctatggaagc 10051739  T

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Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 34470628 - 34470449
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||          ||| |||||||||||||||||||||| |||||||    
T  34470628 aacctaaactatcataacatcataaaatcaataaacctctacaatcccaatttaaccaaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaatag 34470530  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||    
T  34470529 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggtttatgctttgtgaaattcgcacctatggaagc 34470449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 51011886 - 51011707
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||          |||||||||||||||||||||||||||||| |||    
T  51011886 aacctaaactatcataacatcataaattcaataaacctctataatcacaatttaaccaaaaaaaa-ctatcaaatcaatcacaaaatagcaacgcagtag 51011788  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    ||| ||||||| ||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||    
T  51011787 gatacaaaaaatttacttgattttgtgcttgaaattgacttcgaatgacttatggtttgtgaaattcgcacctatggaagc 51011707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 49275046 - 49275224
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||          ||| |||||||||| ||||||||||| |||||||    
T  49275046 aacctaaactatcagaacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaa--ctaacaaatcaatcgcaaaatagcaatgcaatag 49275143  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    |||| ||||||||||||| ||||||||||||||||||||||  |||| |||||| ||||||||||| ||||||||||||||    
T  49275144 gattaaaaaaacttacttaattttgtgcttgaaattggcttgaaatgacttatgctttgtgaaattcgcacctatggaagc 49275224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 50457813 - 50457668
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||           ||| |||||||||||||||||||| | |||||||    
T  50457813 aacctaaaccatcataacatcataaaatcaataaacctacataatcgcaatttaa-aaataaaaaactaacaaatcaatcacaaaatagcgatgcaatag 50457715  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  50457714 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 50457668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 195
Target Start/End: Complemental strand, 27096304 - 27096130
Alignment:
Q  21 aaacctaaactatcataacatcataaaatcaataaacc-tctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaat 119  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||          ||| ||| |||||||||| | ||||| |||||    
T  27096304 aaacctaaactatcataaaatcataaaatcaataaaacatctataatcgaaatttaaccaaaaacaa-ctaacaattcaatcacaacacagcaatgcaat 27096206  T
Q  120 aggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcaccta 195  Q
    ||||||||||| |||||||||||||| | |||  ||||||||| |||||||||| | || |||||| | |||||||    
T  27096205 aggattcaaaacacttacttgattttttccttagaattggcttggaatggcttaagcttggtgaaaatcgcaccta 27096130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 20374453 - 20374378
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    ||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20374453 tcaatcataaaacaacaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggct 20374378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 47759523 - 47759398
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||           ||| |||||||||||||||||||||| | |||||    
T  47759523 aacctaaactatcataacatcataaaatcaataaacctctgcaatcgcaatttaa-taaaaaaaaactaacaaatcaatcacaaaatagcaatgtaatag 47759425  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||||||||||||||||||    
T  47759424 gatggtaacaacttacttgattttgtg 47759398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 46412849 - 46412724
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||          |||  ||||||||||||||||||||| | |||||    
T  46412849 aacctaaactatcagaacatcataaaattaataaacttctataatcgcaatttaac-aaaaaaaaactaataaatcaatcacaaaatagcaatgtaatag 46412751  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||||||||||||||||||    
T  46412750 gatggtaacaacttacttgattttgtg 46412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 55267652 - 55267585
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  55267652 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 55267585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 2267278 - 2267225
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  2267278 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 2267225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 3493807 - 3493750
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  3493807 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttctaatggctt 3493750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 3497501 - 3497444
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  3497501 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttctaatggctt 3497444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 36136449 - 36136502
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  36136449 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 36136502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 50998505 - 50998558
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  50998505 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 50998558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 45099046 - 45098970
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||| ||||||| | ||| |||||||||||||||||||||||||| ||||||| || |||||| ||| |||||||||    
T  45099046 tcaaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattgacttggaatggctt 45098970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 8397787 - 8397740
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  8397787 gcaataggattcaaaacacttacttgattttgtgcttgtaattggctt 8397740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 43571520 - 43571591
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| |||||||||||||||||||||||||| || |||| ||||||||| ||| |||||||||    
T  43571520 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttctgtgattgaaattgacttggaatggctt 43571591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 44490582 - 44490515
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  44490582 cacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 44490515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 55205504 - 55205437
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| || |||||||||| |||||    
T  55205504 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttggaatg 55205437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 2430114 - 2430180
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaat 167  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||| |||| ||||    
T  2430114 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattagcttggaat 2430180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 34645780 - 34645726
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||    
T  34645780 ataggattcaaaaaacttacttgtttttgtgatcgaaattggcttggaatggctt 34645726  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 18441954 - 18442026
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||| | ||| |||||| ||||||||| |||||||||||| |||||||  ||||||||| |||||    
T  18441954 tcaatcacaaaacaacaatgcaatatgattcaaaacacttacttgattatgtgcttagaattggcttggaatg 18442026  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 19487028 - 19487100
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||||||| | ||| |||||| ||||||||| |||||||||||| |||||||  ||||||||| |||||    
T  19487028 tcaatcacaaaacaacaatgcaatatgattcaaaacacttacttgattatgtgcttagaattggcttggaatg 19487100  T

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Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 41579584 - 41579640
Alignment:
Q  115 gcaataggattcaaaa-aacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||||    
T  41579584 gcaataggattcaaaaaaacttacttgtttttgtgattgaaattggcttggaatggc 41579640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 46345163 - 46345095
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatgg 169  Q
    ||||||| | ||| |||||| |||| |||||||||||||| ||||||| ||||||||||||| ||||||    
T  46345163 cacaaaacaacaatgcaataagattaaaaaaacttacttgtttttgtgattgaaattggcttggaatgg 46345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 52568000 - 52567928
Alignment:
Q  96 tcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||| ||||||| | ||| |||||| ||||||||||||||||||| ||||||| ||||||||| ||| |||||    
T  52568000 tcaaccacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattgacttggaatg 52567928  T

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Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 2645677 - 2645631
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggctt 162  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||    
T  2645677 caataggattcaaaaaacttacttgtttttgtgattaaaattggctt 2645631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 2950585 - 2950531
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  2950585 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 2950531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 30194187 - 30194241
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaa 76  Q
    |||||||| ||||||| ||||||||| ||||||||| | ||||||||||||||||    
T  30194187 aacctaaattatcatagcatcataaactcaataaacttgtataatcgcaatttaa 30194241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 34051167 - 34051221
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  34051167 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 34051221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 43478679 - 43478737
Alignment:
Q  115 gcaataggattcaaaa-aacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||| |||||||||| ||||||| ||||||||||||| |||||||||    
T  43478679 gcaataggattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 43478737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 46406445 - 46406499
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  46406445 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 46406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 49138833 - 49138779
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  49138833 ataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 49138779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 50457624 - 50457582
Alignment:
Q  210 cgtaacaatggagttttggtaactcctatgctgttttgttcat 252  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  50457624 cgtaacaatggagttttggaaactcctatgctgttctgttcat 50457582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 27188752 - 27188874
Alignment:
Q  26 taaactatcataacatcataaaatcaataaa-cctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggat 124  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||||||           |||  ||||||||||||||||||||| | ||||| ||    
T  27188752 taaactatcataacat-acaaaatcaataaaacctctataatcgcaatttaaacaaaaaaaaactaagaaatcaatcacaaaatagcaatgtaatagaat 27188850  T
Q  125 tcaaaaaacttacttgattttgtg 148  Q
       || ||||||||||||||||||    
T  27188851 ggtaacaacttacttgattttgtg 27188874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 41805511 - 41805568
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattg 158  Q
    ||||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||||||    
T  41805511 cacaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattg 41805568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 49217313 - 49217260
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||| || |||||    
T  49217313 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggtttggaatg 49217260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 14633125 - 14633161
Alignment:
Q  40 atcataaaatcaataaacctctataatcgcaatttaa 76  Q
    |||||||||||||||||||| ||||||||||||||||    
T  14633125 atcataaaatcaataaacctttataatcgcaatttaa 14633161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 7247707 - 7247774
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||||||||||||||||||||||  |||| || ||||||||| ||| |||||    
T  7247707 cacaaaacaacaatgcaataggattcaaaaaacttacttatttttttgattgaaattgacttggaatg 7247774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 24700958 - 24700891
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| ||||||||||||||||||| |||| || ||||| ||||||| |||||    
T  24700958 cacaaaacaacaatgcaataagattcaaaaaacttacttgtttttttgattgaatttggcttggaatg 24700891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 27096424 - 27096389
Alignment:
Q  21 aaacctaaactatcataacatcataaaatcaataaa 56  Q
    |||||||||||||||||| |||||||||||||||||    
T  27096424 aaacctaaactatcataaaatcataaaatcaataaa 27096389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 34691862 - 34691795
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||||||||||| || ||||||||| ||||||| |||||||| |||| |||||    
T  34691862 cacaaaacaacaatgcaataggattcagaatacttacttgtttttgtgattgaaattagcttggaatg 34691795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 4002949 - 4002884
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaat 167  Q
    ||||||| | ||| |||||||||||| ||||||||||||| ||||||| || |||||||||| ||||    
T  4002949 cacaaaacaacaatgcaataggattctaaaaacttacttgtttttgtgatt-aaattggcttggaat 4002884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 2267181 - 2267144
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  2267181 aacaatggagttttggaaactcctatgctgttctgttc 2267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 4002839 - 4002802
Alignment:
Q  213 aacaatggagttttggtaactcctatgctgttttgttc 250  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  4002839 aacaatggagttttggaaactcctatgctgttctgttc 4002802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 13894449 - 13894396
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| ||||||| |||||| ||| ||| ||||||||||||| |||||    
T  13894449 gcaataggattaaaaaaacctacttgttttggtgattgaaattggcttggaatg 13894396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 88 - 257
Target Start/End: Original strand, 26488290 - 26488458
Alignment:
Q  88 ctatcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatt 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||    
T  26488290 ctatcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatggcttatggtttgtgaattt 26488389  T
Q  188 tgcacctatggaagcnnnnnnncgtaacaatggagttttggtaactcctatgctgttttgttcatctcac 257  Q
     ||||||||||||||       ||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  26488390 cgcacctatggaagc-aaaaaacgtaacaatggagttttggaaactcctatgctgtttggttcatatcac 26488458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 26488104 - 26488281
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnn--ctatcaaatcaatcacaaaatagcaacgcaat 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||            ||||||||||||||||||||||||||||||||    
T  26488104 aacctaaactatcgtaacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaat 26488203  T
Q  120 aggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatg 197  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| || |||||||||    
T  26488204 aggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatgacttatggtttgtgaatttcgcacctatg 26488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 19241292 - 19241143
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| ||||||     
T  19241292 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacctaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaatat 19241194  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  19241193 gattcaaaaaacttacttgattttgtgtttgaaattggcttggaatggctt 19241143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 19314476 - 19314327
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||| ||||||     
T  19314476 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacctaaaaaaa-ctaacaaatcaatcacaaaatagcaatgcaatat 19314378  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  19314377 gattcaaaaaacttacttgattttgtgtttgaaattggcttggaatggctt 19314327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 38032524 - 38032377
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||| ||||| |||||||||||||||| |||||||    
T  38032524 aacctaaactatcataacatcataaaatcaataaacctatataatcgcaatttaaccaaaaaaa--ctaacaaataaatcacaaaatagcaatgcaatag 38032427  T
Q  122 gattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggct 171  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38032426 gattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggct 38032377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 42167525 - 42167399
Alignment:
Q  22 aacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaatag 121  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||            || ||||||| |||||||||||||| | |||||    
T  42167525 aacctaaactatcataacatcaaaaaatcaataaacctctataatcgcaatttaataaaaaaaaatttaacaaatcattcacaaaatagcaatgtaatag 42167426  T
Q  122 gattcaaaaaacttacttgattttgtg 148  Q
    |||   || ||||||||||||||||||    
T  42167425 gatgttaacaacttacttgattttgtg 42167399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 38872778 - 38872847
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    ||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  38872778 cacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggc 38872847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 22550701 - 22550772
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||| | ||| ||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||    
T  22550701 cacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctt 22550772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 31170635 - 31170580
Alignment:
Q  118 ataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctta 173  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  31170635 ataggattcaaaacacttacttgattttgtgcttgaaattggcttggaatgactta 31170580  T

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Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 41016636 - 41016579
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  41016636 gcaataggattcaaaaaacttaattgtttttgtgattgaaattggcttggaatggctt 41016579  T

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Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 41276736 - 41276793
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  41276736 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggctt 41276793  T

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Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 45066212 - 45066269
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  45066212 gcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggctt 45066269  T

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Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 18438866 - 18438791
Alignment:
Q  96 tcaatcacaaaatagcaacgcaatagg-attcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    |||| ||||||| | ||| |||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  18438866 tcaaccacaaaacaacaatgcaatagggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggc 18438791  T

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Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 484038 - 483981
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  484038 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 483981  T

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Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 26455526 - 26455579
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  26455526 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggctgagaatg 26455579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 44052076 - 44052133
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||  ||||||||    
T  44052076 gcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggctt 44052133  T

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Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 41855600 - 41855533
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| ||||| |||||||||||||||||||| ||||||| |||||||||| || |||||    
T  41855600 cacaaaacaacaatgcaatgggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatg 41855533  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 14120410 - 14120474
Alignment:
Q  98 aatcacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggctta 163  Q
    |||||||||| |||||  ||||||||||||||| |||||||||||||| |||||  ||||||||||    
T  14120410 aatcacaaaacagcaatacaataggattcaaaacacttacttgatttt-tgcttagaattggctta 14120474  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 15031105 - 15031049
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||  ||||||||    
T  15031105 gcaataggattcaaaaa-cttacttgtttttgtgattgaaattggcttgtaatggctt 15031049  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 28168454 - 28168506
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||||  |||||||||||||||| ||||||| ||||||||||||| |||||    
T  28168454 caatagggctcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 28168506  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 40703997 - 40704063
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    ||||||| | ||| |||||| ||||||||| ||||||||| ||||||| ||||||||||||| |||||    
T  40703997 cacaaaacaacaatgcaatatgattcaaaa-acttacttgtttttgtgattgaaattggcttggaatg 40704063  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 42605085 - 42605138
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||| ||||||||||||||||||  || |||| ||||||||||||| |||||    
T  42605085 gcaatatgattcaaaaaacttacttatttctgtgattgaaattggcttggaatg 42605138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 38032337 - 38032297
Alignment:
Q  212 taacaatggagttttggtaactcctatgctgttttgttcat 252  Q
    ||||||| ||||||||| ||||||||||||||| |||||||    
T  38032337 taacaattgagttttggaaactcctatgctgttatgttcat 38032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 1942 - 2105
Alignment:
Q  40 atcataaaatcaataaa-cctctataatcgcaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttact 138  Q
    ||||||||||||||||| || ||||||||| ||||||||          ||| ||| |||||||||||| | |||  |||||| ||||| ||||||||||    
T  1942 atcataaaatcaataaaaccactataatcgaaatttaaccaaaaaaaaactaacaattcaatcacaaaacatcaatacaatagaattcacaaaacttact 2041  T
Q  139 tgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaatttgcacctatggaagc 202  Q
    || ||||||||||||||||| ||| |||||||||||| ||||||||||| |||||| |||||||    
T  2042 tgtttttgtgcttgaaattgacttggaatggcttatgctttgtgaaattcgcacctttggaagc 2105  T

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Target: scaffold0192 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 16628 - 16559
Alignment:
Q  101 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggc 170  Q
    ||||||| | ||| |||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||    
T  16628 cacaaaacaacaatgcaataggattcaaaaaatttacttgtttttgtgcttgaaattgacttggaatggc 16559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 3434 - 3491
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||    
T  3434 gcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctt 3491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 10900 - 10847
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatg 168  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  10900 gcaatatgattcaaaaaacttacttgtttttgtgattgaaattggcttaaaatg 10847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 84802 - 84745
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||    
T  84802 gcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggctt 84745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 5553 - 5496
Alignment:
Q  115 gcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||| |||||||||||||| |||| || |||||||||||||  ||||||||    
T  5553 gcaataggattaaaaaaacttacttgtttttatgattgaaattggcttgtaatggctt 5496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 56 - 112
Alignment:
Q  116 caataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggctt 172  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||  ||||||||    
T  56 caataggattcaaaaaacttacttgtttttgtgattaaaattgacttgtaatggctt 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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