View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5385-Insertion-3 (Length: 894)

Name: NF5385-Insertion-3
Description: NF5385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5385-Insertion-3
NF5385-Insertion-3
[»] chr8 (28 HSPs)
chr8 (8-168)||(4950924-4951085)
chr8 (747-894)||(4950590-4950734)
chr8 (356-551)||(4950750-4950929)
chr8 (272-354)||(27325861-27325943)
chr8 (276-346)||(36251433-36251503)
chr8 (276-349)||(32501087-32501160)
chr8 (276-353)||(34186714-34186791)
chr8 (276-352)||(4054174-4054250)
chr8 (274-354)||(12898815-12898895)
chr8 (272-356)||(37449309-37449393)
chr8 (276-346)||(5277393-5277463)
chr8 (276-352)||(42768311-42768387)
chr8 (272-352)||(22719543-22719623)
chr8 (279-353)||(11253429-11253503)
chr8 (283-349)||(36816507-36816573)
chr8 (276-352)||(7271957-7272033)
chr8 (272-356)||(43397884-43397968)
chr8 (279-353)||(29025370-29025444)
chr8 (283-351)||(36660339-36660407)
chr8 (283-355)||(37133747-37133819)
chr8 (282-353)||(24479336-24479407)
chr8 (275-312)||(31249452-31249489)
chr8 (276-353)||(34639640-34639717)
chr8 (289-353)||(10692551-10692615)
chr8 (693-728)||(1605038-1605073)
chr8 (283-312)||(10731660-10731689)
chr8 (668-728)||(16687521-16687582)
chr8 (699-728)||(33763466-33763495)
[»] chr4 (52 HSPs)
chr4 (272-354)||(26492110-26492192)
chr4 (272-356)||(51986145-51986229)
chr4 (272-352)||(38376378-38376458)
chr4 (272-355)||(26732328-26732411)
chr4 (272-354)||(23369218-23369300)
chr4 (276-352)||(43175091-43175167)
chr4 (276-354)||(44539841-44539919)
chr4 (272-349)||(24575742-24575819)
chr4 (279-352)||(53801647-53801720)
chr4 (276-352)||(39440591-39440667)
chr4 (276-354)||(37297156-37297233)
chr4 (272-354)||(10250401-10250483)
chr4 (275-353)||(36178012-36178090)
chr4 (272-353)||(5622561-5622642)
chr4 (279-352)||(15175656-15175729)
chr4 (276-353)||(26724859-26724936)
chr4 (282-355)||(29175338-29175411)
chr4 (279-356)||(37997364-37997441)
chr4 (272-357)||(46213073-46213158)
chr4 (276-355)||(11068795-11068874)
chr4 (672-721)||(6608451-6608500)
chr4 (282-354)||(2575676-2575748)
chr4 (282-354)||(34616674-34616746)
chr4 (282-354)||(39195170-39195242)
chr4 (276-355)||(31641450-31641529)
chr4 (279-354)||(38382431-38382506)
chr4 (279-354)||(39478547-39478622)
chr4 (279-354)||(42853687-42853762)
chr4 (279-354)||(47181951-47182026)
chr4 (279-354)||(48402083-48402158)
chr4 (276-353)||(27965094-27965169)
chr4 (670-728)||(31846791-31846849)
chr4 (672-725)||(31012229-31012282)
chr4 (280-352)||(38510661-38510731)
chr4 (282-353)||(27050973-27051044)
chr4 (279-354)||(56363931-56364006)
chr4 (290-352)||(5233558-5233620)
chr4 (283-356)||(19473840-19473913)
chr4 (668-724)||(2254630-2254686)
chr4 (276-312)||(29531534-29531570)
chr4 (576-620)||(31846888-31846932)
chr4 (276-344)||(38134460-38134528)
chr4 (279-351)||(56474656-56474728)
chr4 (697-728)||(31846919-31846950)
chr4 (670-728)||(32008336-32008395)
chr4 (283-346)||(45083086-45083149)
chr4 (570-612)||(25818384-25818426)
chr4 (278-312)||(42360265-42360299)
chr4 (295-352)||(26907970-26908027)
chr4 (296-353)||(39259080-39259137)
chr4 (283-352)||(39606086-39606155)
chr4 (668-724)||(46321433-46321490)
[»] chr3 (56 HSPs)
chr3 (272-353)||(52939754-52939835)
chr3 (272-352)||(19149093-19149173)
chr3 (272-355)||(27541387-27541470)
chr3 (276-355)||(38926735-38926814)
chr3 (276-356)||(5114185-5114265)
chr3 (272-348)||(5244332-5244408)
chr3 (276-352)||(42356972-42357048)
chr3 (272-352)||(44413283-44413363)
chr3 (272-352)||(47472432-47472512)
chr3 (272-354)||(44813239-44813321)
chr3 (276-352)||(32924169-32924245)
chr3 (272-356)||(44856056-44856140)
chr3 (273-352)||(16969454-16969533)
chr3 (272-355)||(37302649-37302732)
chr3 (279-354)||(52326129-52326204)
chr3 (276-353)||(52254025-52254102)
chr3 (276-352)||(13735837-13735913)
chr3 (668-728)||(22893900-22893960)
chr3 (279-351)||(24256660-24256732)
chr3 (272-352)||(36670902-36670982)
chr3 (279-349)||(42358529-42358599)
chr3 (276-354)||(46624014-46624092)
chr3 (279-352)||(26014922-26014995)
chr3 (276-353)||(41309224-41309301)
chr3 (276-352)||(7934081-7934157)
chr3 (276-355)||(33939345-33939424)
chr3 (670-728)||(11512487-11512545)
chr3 (283-353)||(55151604-55151674)
chr3 (279-355)||(31157562-31157638)
chr3 (276-356)||(35597269-35597349)
chr3 (279-354)||(44383299-44383374)
chr3 (272-354)||(35376967-35377049)
chr3 (282-352)||(37503635-37503705)
chr3 (272-329)||(20547901-20547958)
chr3 (276-352)||(288833-288909)
chr3 (279-355)||(13348019-13348095)
chr3 (576-620)||(20286921-20286965)
chr3 (279-354)||(21217622-21217697)
chr3 (279-354)||(37056943-37057018)
chr3 (272-349)||(8847213-8847289)
chr3 (279-351)||(23592568-23592640)
chr3 (273-356)||(7668072-7668154)
chr3 (693-728)||(49159502-49159537)
chr3 (272-358)||(25641465-25641551)
chr3 (672-729)||(29081597-29081655)
chr3 (282-356)||(44445407-44445481)
chr3 (283-348)||(11630642-11630707)
chr3 (279-351)||(23600703-23600775)
chr3 (280-353)||(39630504-39630577)
chr3 (693-729)||(25790897-25790933)
chr3 (276-312)||(41505598-41505634)
chr3 (272-304)||(45000166-45000198)
chr3 (272-312)||(50318317-50318357)
chr3 (564-620)||(11512386-11512448)
chr3 (699-729)||(36738382-36738412)
chr3 (566-616)||(48342888-48342937)
[»] chr7 (27 HSPs)
chr7 (410-525)||(10485023-10485137)
chr7 (272-352)||(38956506-38956586)
chr7 (276-351)||(32529745-32529820)
chr7 (272-352)||(44895460-44895540)
chr7 (272-355)||(3937008-3937091)
chr7 (670-728)||(17272799-17272857)
chr7 (276-353)||(24614203-24614280)
chr7 (272-353)||(40112841-40112922)
chr7 (272-353)||(43025443-43025524)
chr7 (272-352)||(22918057-22918137)
chr7 (280-355)||(43942743-43942818)
chr7 (279-353)||(41189428-41189504)
chr7 (276-355)||(25192802-25192881)
chr7 (272-352)||(41989628-41989710)
chr7 (279-354)||(46022153-46022228)
chr7 (279-352)||(40417884-40417957)
chr7 (283-352)||(45851095-45851164)
chr7 (279-354)||(7701654-7701729)
chr7 (693-728)||(29681896-29681931)
chr7 (282-353)||(31445431-31445502)
chr7 (674-729)||(43500085-43500140)
chr7 (670-712)||(29681864-29681906)
chr7 (272-312)||(38073323-38073363)
chr7 (272-312)||(38861199-38861239)
chr7 (272-352)||(46578023-46578103)
chr7 (565-620)||(7211860-7211921)
chr7 (565-620)||(17272699-17272760)
[»] chr5 (38 HSPs)
chr5 (272-355)||(18258678-18258761)
chr5 (279-354)||(1671652-1671727)
chr5 (272-354)||(26791130-26791212)
chr5 (272-352)||(14923176-14923256)
chr5 (272-352)||(28306020-28306100)
chr5 (276-352)||(33037627-33037703)
chr5 (276-354)||(36739055-36739133)
chr5 (279-352)||(41321365-41321438)
chr5 (272-351)||(13168625-13168704)
chr5 (273-351)||(1764328-1764406)
chr5 (272-353)||(5168286-5168367)
chr5 (668-728)||(5215569-5215629)
chr5 (276-352)||(7287077-7287153)
chr5 (276-356)||(28467337-28467417)
chr5 (279-349)||(2972434-2972504)
chr5 (272-353)||(14051202-14051283)
chr5 (668-724)||(36568802-36568858)
chr5 (279-362)||(13309993-13310076)
chr5 (282-360)||(39591793-39591871)
chr5 (282-360)||(39592185-39592263)
chr5 (279-360)||(8687001-8687082)
chr5 (279-352)||(15479579-15479652)
chr5 (576-620)||(1839988-1840032)
chr5 (272-344)||(7076464-7076536)
chr5 (279-354)||(17626096-17626171)
chr5 (286-353)||(35634722-35634789)
chr5 (282-354)||(1274471-1274542)
chr5 (283-355)||(7552852-7552924)
chr5 (576-620)||(29385382-29385426)
chr5 (693-728)||(19417444-19417479)
chr5 (678-721)||(19417552-19417595)
chr5 (693-728)||(29385409-29385444)
chr5 (284-351)||(42175034-42175101)
chr5 (668-729)||(9904167-9904229)
chr5 (279-355)||(22972227-22972303)
chr5 (669-709)||(25879328-25879368)
chr5 (693-728)||(1839970-1840005)
chr5 (283-350)||(39054701-39054768)
[»] chr2 (44 HSPs)
chr2 (272-351)||(9207693-9207772)
chr2 (272-354)||(22888703-22888785)
chr2 (272-355)||(9760121-9760204)
chr2 (272-355)||(18254094-18254177)
chr2 (272-354)||(1248789-1248871)
chr2 (276-354)||(43487486-43487564)
chr2 (272-349)||(6049236-6049313)
chr2 (272-355)||(42421783-42421866)
chr2 (272-356)||(9194344-9194428)
chr2 (275-355)||(9990797-9990877)
chr2 (279-357)||(32477442-32477520)
chr2 (283-352)||(3838768-3838837)
chr2 (276-349)||(42091393-42091468)
chr2 (279-354)||(2076679-2076754)
chr2 (272-351)||(34944979-34945058)
chr2 (674-728)||(12918637-12918691)
chr2 (276-357)||(19633389-19633471)
chr2 (276-357)||(19830290-19830372)
chr2 (670-728)||(39819163-39819221)
chr2 (276-361)||(9647239-9647324)
chr2 (282-355)||(41042367-41042440)
chr2 (272-352)||(7698274-7698354)
chr2 (283-354)||(8848583-8848654)
chr2 (280-355)||(21611540-21611615)
chr2 (279-354)||(25270468-25270543)
chr2 (282-353)||(37737858-37737929)
chr2 (282-353)||(41195697-41195768)
chr2 (272-312)||(17388531-17388571)
chr2 (693-736)||(12918500-12918543)
chr2 (670-729)||(15562304-15562363)
chr2 (283-353)||(27490617-27490687)
chr2 (282-354)||(3097747-3097819)
chr2 (576-620)||(39819080-39819124)
chr2 (279-351)||(41056636-41056708)
chr2 (283-354)||(13333056-13333127)
chr2 (693-728)||(39819062-39819097)
chr2 (578-620)||(12918552-12918594)
chr2 (276-312)||(6511358-6511394)
chr2 (272-312)||(44287370-44287410)
chr2 (297-352)||(42434247-42434302)
chr2 (291-353)||(18846733-18846795)
chr2 (285-351)||(29349622-29349688)
chr2 (688-725)||(13421692-13421729)
chr2 (583-616)||(15562228-15562261)
[»] chr1 (62 HSPs)
chr1 (272-354)||(27464943-27465025)
chr1 (276-349)||(45333818-45333891)
chr1 (276-352)||(26469466-26469542)
chr1 (272-352)||(48470742-48470822)
chr1 (276-355)||(649876-649955)
chr1 (272-354)||(31088284-31088366)
chr1 (272-354)||(45121367-45121448)
chr1 (670-728)||(50754824-50754882)
chr1 (276-352)||(44914459-44914536)
chr1 (668-728)||(28045417-28045477)
chr1 (272-352)||(50726136-50726216)
chr1 (272-355)||(23645514-23645597)
chr1 (276-355)||(37274918-37274997)
chr1 (282-356)||(19055643-19055717)
chr1 (276-353)||(33100915-33100992)
chr1 (276-352)||(8350087-8350162)
chr1 (276-348)||(35369807-35369879)
chr1 (670-729)||(9379918-9379977)
chr1 (670-728)||(9884941-9884999)
chr1 (279-352)||(44519039-44519112)
chr1 (277-353)||(30735180-30735256)
chr1 (272-352)||(37619647-37619727)
chr1 (272-356)||(45640405-45640488)
chr1 (277-352)||(15469945-15470019)
chr1 (279-354)||(21401508-21401583)
chr1 (279-346)||(50932414-50932481)
chr1 (276-346)||(3851265-3851335)
chr1 (282-352)||(3981914-3981984)
chr1 (670-728)||(28739313-28739371)
chr1 (276-357)||(37685436-37685517)
chr1 (276-357)||(37700001-37700082)
chr1 (272-348)||(40861154-40861230)
chr1 (282-362)||(43775319-43775399)
chr1 (272-355)||(18434898-18434981)
chr1 (279-354)||(46907305-46907380)
chr1 (279-353)||(52576188-52576263)
chr1 (276-357)||(2571742-2571824)
chr1 (668-729)||(44381916-44381978)
chr1 (283-357)||(50149060-50149134)
chr1 (272-351)||(49065253-49065332)
chr1 (669-715)||(35251189-35251235)
chr1 (272-309)||(3159479-3159516)
chr1 (279-352)||(19947632-19947705)
chr1 (576-620)||(9379835-9379879)
chr1 (576-620)||(9884858-9884902)
chr1 (668-704)||(15928097-15928133)
chr1 (290-354)||(30467419-30467483)
chr1 (564-612)||(44382439-44382486)
chr1 (273-352)||(48103250-48103330)
chr1 (564-620)||(28739410-28739472)
chr1 (282-353)||(31827064-31827135)
chr1 (564-621)||(4579168-4579230)
chr1 (272-322)||(4776859-4776909)
chr1 (318-356)||(41677220-41677258)
chr1 (279-312)||(6693267-6693300)
chr1 (275-312)||(12657329-12657366)
chr1 (587-620)||(15928171-15928204)
chr1 (279-356)||(18512227-18512304)
chr1 (283-352)||(26207955-26208024)
chr1 (290-351)||(30570645-30570706)
chr1 (669-725)||(49200057-49200114)
chr1 (587-620)||(50754752-50754785)
[»] scaffold0199 (1 HSPs)
scaffold0199 (276-356)||(8775-8855)
[»] chr6 (22 HSPs)
chr6 (272-352)||(552896-552976)
chr6 (272-352)||(14818035-14818115)
chr6 (276-355)||(33430247-33430326)
chr6 (670-728)||(2543744-2543802)
chr6 (277-355)||(15974716-15974794)
chr6 (279-353)||(32316815-32316889)
chr6 (272-353)||(1156823-1156904)
chr6 (279-351)||(11612298-11612370)
chr6 (670-728)||(11448157-11448215)
chr6 (279-352)||(13689882-13689955)
chr6 (279-347)||(18737460-18737528)
chr6 (279-355)||(26595459-26595535)
chr6 (276-352)||(31077901-31077977)
chr6 (279-354)||(16199560-16199635)
chr6 (272-355)||(34047490-34047573)
chr6 (281-354)||(4820479-4820552)
chr6 (279-352)||(5694039-5694112)
chr6 (283-352)||(277105-277174)
chr6 (587-620)||(2543840-2543873)
chr6 (699-728)||(16193850-16193879)
chr6 (283-352)||(22079451-22079520)
chr6 (282-355)||(24900887-24900960)
[»] scaffold0056 (1 HSPs)
scaffold0056 (272-355)||(76504-76587)
[»] scaffold0010 (2 HSPs)
scaffold0010 (406-525)||(223999-224109)
scaffold0010 (21-99)||(223789-223878)
[»] scaffold0098 (1 HSPs)
scaffold0098 (276-352)||(49402-49478)
[»] scaffold0519 (1 HSPs)
scaffold0519 (279-353)||(11892-11966)
[»] scaffold0067 (1 HSPs)
scaffold0067 (276-312)||(35630-35666)
[»] scaffold0148 (1 HSPs)
scaffold0148 (296-355)||(20786-20845)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 5e-74; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 4951085 - 4950924
Alignment:
Q  8 aaaacatataatgaatcaaaagggtatccactataaacattgtggacgaggttttttatggtcttctctgcataccccc-atctttcattcataaaaaac 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4951085 aaaacatataatgaatcaaaagggtatccactaaaaacattgtggacgaggttttttatggtcttctctgcataccccccatctttcattcataaaaaac 4950986  T
Q  107 ttgataatatcatcaagtggtgcaggtgtcgcttgaaatcacaatataccaggttttaaata 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4950985 ttgataatatcatcaagtggtgcaggtgtcgcttgaaatcacaatatacaaggttgtaaata 4950924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 747 - 894
Target Start/End: Complemental strand, 4950734 - 4950590
Alignment:
Q  747 cgttttcagtataaagcaaaactagatattcgaaataaaaaactactagaagcaaaactagatactgcatgtagcacaaagtgtatgtgagaaaatttga 846  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4950734 cgttttcagtataaagcaaaactagatattcgaaataaaaaactactaaaagcaaaactagatactgcatgtagcaccaagtgtatgtgagaaaatttga 4950635  T
Q  847 ttttgtaaaattggattattgcttataatttgagttgaaggtaaagtg 894  Q
    |||| ||||||| ||||||||| ||||| |||||||||||||||||||    
T  4950634 ttttttaaaatt-gattattgc-tataa-ttgagttgaaggtaaagtg 4950590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 356 - 551
Target Start/End: Complemental strand, 4950929 - 4950750
Alignment:
Q  356 taaataaggtggaccctttggtacccaagagtctgcgacgcaagtgcaatgtgcaaccattgatgtgaccataatttaacaaagtgacaatgaagtgcat 455  Q
    ||||||||||| || || |||||||||||||| |||||||||| |||||       |||||||||||||| |||||||| ||||||||||| ||||||||    
T  4950929 taaataaggtgaacactctggtacccaagagtttgcgacgcaaatgcaa-------ccattgatgtgaccttaatttaaaaaagtgacaat-aagtgcat 4950838  T
Q  456 cagcaaatacccaatagagtattccacacttttcaatttgtcaaacttttgaatttccttttggtggtgtcaggtgtgtgtgatctaaaaattcac 551  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  4950837 cagcaa-tacccaatagagtattccacacttttcaatttgtcaaacttttgaatttccttttgg-------aggtgtgtgtgatctaaaaattcac 4950750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 27325861 - 27325943
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||    
T  27325861 gtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactctt 27325943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 36251433 - 36251503
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 346  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||    
T  36251433 cactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 32501160 - 32501087
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| ||||||||||||||||||    
T  32501160 cactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 34186714 - 34186791
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||| ||||||||||||||||||||||    
T  34186714 cactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 4054250 - 4054174
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||| |||||||| ||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  4054250 cactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 12898895 - 12898815
Alignment:
Q  274 gccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||| |||||||    
T  12898895 gccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 37449393 - 37449309
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||| || ||| |||||| ||| |||||||||||||||||||||    
T  37449393 gtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactctttt 37449309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 5277463 - 5277393
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 346  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| || ||| |||||||||||||||    
T  5277463 cactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 42768311 - 42768387
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||| |||||||||||||||||||||||  ||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  42768311 cactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 22719543 - 22719623
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||| |||||||||||| ||||||||||||||| || |||| ||| |||||| |||||| | |||||||||||||||||||    
T  22719543 gtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 11253503 - 11253429
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||| || ||||||||||||||||| ||||||||    
T  11253503 tacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 36816573 - 36816507
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||| ||||| |||||||||||| |||| ||| |||||| |||||||||||||||||||||||||    
T  36816573 tcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 7271957 - 7272033
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||| |||||||| |||| ||||||||||||||||| ||| |||||| || ||| |||||||| ||||||||||||    
T  7271957 cactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 43397884 - 43397968
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||| ||||||| ||||||||||||||| ||||||| |||  ||||| || ||| ||||||||| ||||||| |||||||    
T  43397884 gtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctctttt 43397968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 29025370 - 29025444
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||| ||||||||||||||| ||||| | ||| |||||| ||| || |||||| |||||||||||||||    
T  29025370 tacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactct 29025444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 36660407 - 36660339
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||| |||| |||||||||||||||||| ||| || ||| || ||| ||||||||||||||||||||    
T  36660407 tcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 37133819 - 37133747
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||| ||||||||||||||| ||||||| ||| ||||||  || || |||||| |||||||||||||||||    
T  37133819 tcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactcttt 37133747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 24479336 - 24479407
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||||||  ||||||| ||| || ||| ||||||  ||| |||||||||||||||||    
T  24479336 ctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 31249489 - 31249452
Alignment:
Q  275 ccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31249489 ccactacctcatttcctttgtaaaattttggttgtcac 31249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 34639640 - 34639717
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||||||  ||||||||||||||||| || | |||||| |||  || || ||||||||||||||| ||||||    
T  34639640 cactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactct 34639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 10692551 - 10692615
Alignment:
Q  289 cctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||||||||||||||||   || ||| || |||||| ||||||||||||| ||||||||    
T  10692551 cctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactct 10692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 728
Target Start/End: Original strand, 1605038 - 1605073
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1605038 aatgtcaccaatgtcaccaactacaatgtcacccaa 1605073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 312
Target Start/End: Original strand, 10731660 - 10731689
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||||||||||||||||||||    
T  10731660 tcatttcctttgtaaaattttgattgtcac 10731689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 728
Target Start/End: Complemental strand, 16687582 - 16687521
Alignment:
Q  668 gtacacttgtaacattgtcgtt-gataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||  ||||||| ||| | ||||||||||||| |||||||||||||||||| ||||    
T  16687582 gtacacttgggacattgtggttagctaatgtcaccaatatcaccaaccacaatgtcatccaa 16687521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 728
Target Start/End: Complemental strand, 33763495 - 33763466
Alignment:
Q  699 accaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||    
T  33763495 accaatgtcaccaaccacaatgtcacccaa 33763466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 1e-31; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 26492110 - 26492192
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  26492110 gtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 51986145 - 51986229
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  51986145 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttt 51986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 38376458 - 38376378
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  38376458 gtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 26732328 - 26732411
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  26732328 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 26732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 23369300 - 23369218
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  23369300 gtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 43175091 - 43175167
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||| |||||| |||||||||||||||||||||    
T  43175091 cactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 44539841 - 44539919
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||||||||||||    
T  44539841 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 24575819 - 24575742
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||    
T  24575819 gtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 53801720 - 53801647
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  53801720 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 39440591 - 39440667
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  39440591 cactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 37297156 - 37297233
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||||||||||||| ||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  37297156 cactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 10250483 - 10250401
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||||| ||||||||||||||| ||||||| ||| |||||  |||||| |||||||||||||||||| ||||    
T  10250483 gtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaattctt 10250401  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 353
Target Start/End: Original strand, 36178012 - 36178090
Alignment:
Q  275 ccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||| |||||||||  ||||||| ||| || ||| ||||||| |||||||||||||||||||||    
T  36178012 ccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

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Target: chr4; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 5622561 - 5622642
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||| |||||||||||||||||||||||||||  || |||| ||| |||| | |||||||||| ||||||||||||||||||    
T  5622561 gtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactct 5622642  T

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Target: chr4; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 15175656 - 15175729
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||| |||| || ||| |||||| |||||| ||||||||||||| |||||||    
T  15175656 tacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 26724936 - 26724859
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||||||||||||  |||| || ||| || ||| |||||| ||||||||||||||||||||||    
T  26724936 cactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 29175338 - 29175411
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||| ||||||||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||    
T  29175338 ctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 29175411  T

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Target: chr4; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 37997364 - 37997441
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||||||| ||||||||||||||| |||| || |||||| ||| ||||||||||||||||||| |||| |||||||    
T  37997364 tacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagctctttt 37997441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 46213073 - 46213158
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 357  Q
    |||| |||||||||||||||||||||||||||| |||| || ||| || ||| |||||| ||| ||||||||||||||||| ||||    
T  46213073 gtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactcattta 46213158  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 11068795 - 11068874
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||| |||||||||||||||||||||||| ||| ||| ||| |||||| ||||||  ||||||||||||||||| |||||    
T  11068795 cactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattcttt 11068874  T

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Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 672 - 721
Target Start/End: Original strand, 6608451 - 6608500
Alignment:
Q  672 acttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgt 721  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  6608451 acttgtaacattgtggttggtaatgtcaccaatgtcaccaaccacaatgt 6608500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 2575748 - 2575676
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||| |||||||||| |||  ||||||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  2575748 ctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 34616674 - 34616746
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||| |||| |||||||||| ||||| | ||| |||||| ||| ||||||||||||||||||||||||||    
T  34616674 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 39195170 - 39195242
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||| |||||||||| ||||||| |||| ||  |||||| ||| ||||||||||||||||||||||||||    
T  39195170 ctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactctt 39195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 31641529 - 31641450
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||| ||||||||| |||||||||| ||||||| ||| || |||  |||||  |||||||||||||||||||||||    
T  31641529 cactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactcttt 31641450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 38382431 - 38382506
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  38382431 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 39478547 - 39478622
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| |||||| ||  ||||||||||||    
T  39478547 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctt 39478622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 42853687 - 42853762
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||||||||| | ||||||||||   | || |||||||||||||||||||||||    
T  42853687 tacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactctt 42853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 47181951 - 47182026
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  47181951 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 48402158 - 48402083
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  48402158 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 27965094 - 27965169
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||| ||  ||||||||| |||||||  || |||||| |||||| ||||||||||||||||||||||    
T  27965094 cactacctcatttccatt--aaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 670 - 728
Target Start/End: Complemental strand, 31846849 - 31846791
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||| | |||| ||||||||| |||||||||||||| ||||||||||||    
T  31846849 acacttgtaacattttggttggtaatgtcacgaatgtcaccaaccataatgtcacccaa 31846791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 672 - 725
Target Start/End: Original strand, 31012229 - 31012282
Alignment:
Q  672 acttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacc 725  Q
    |||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  31012229 acttgtaatattgtggttggtaatgtcactaatgtcaccaaccacaatgtcacc 31012282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 38510731 - 38510661
Alignment:
Q  280 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||  ||||||| ||||| ||||||||||||||    
T  38510731 accttatttcctttataaaattttgattgtcacaaaaattatc--atatataaatgttgaaataacacaactc 38510661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 27051044 - 27050973
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||| ||||||||||||||| ||||||| ||| |||||| || |||  |||||||||||||||| ||||    
T  27051044 ctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 56364006 - 56363931
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| ||||||  || || |||||||||||||||||||||||    
T  56364006 tacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctt 56363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 5233620 - 5233558
Alignment:
Q  290 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||  | ||| |||| | ||| ||||||||||||||||||||||||    
T  5233620 ctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 19473913 - 19473840
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||| ||||||||||||||||||||| | ||| |||||| ||| ||  || |||||||||||||| ||||||    
T  19473913 tcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatctttt 19473840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 668 - 724
Target Start/End: Original strand, 2254630 - 2254686
Alignment:
Q  668 gtacacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcac 724  Q
    ||||||||||||||||||  ||| |||| ||| ||||||||| ||||||||||||||    
T  2254630 gtacacttgtaacattgtgattggtaatatcatcaatgtcacgaaccacaatgtcac 2254686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 29531570 - 29531534
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29531570 cactacctcatttcctttgtaaaattttggttgtcac 29531534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 576 - 620
Target Start/End: Complemental strand, 31846932 - 31846888
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||| |||  |||||||||||||||||||||||||||||    
T  31846932 ggtgacattggtgatattggccaaccacaatgtcacatgtggctt 31846888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 38134460 - 38134528
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataa 344  Q
    |||| |||||||||||||||||||||||| || |||| ||| |||||| || |||  ||||||||||||    
T  38134460 cactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 56474728 - 56474656
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||||||| ||||||||| ||||| ||||| | |||||||| |  |  |||||||||||||||||||||||    
T  56474728 tacctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaact 56474656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 728
Target Start/End: Original strand, 31846919 - 31846950
Alignment:
Q  697 tcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||||    
T  31846919 tcaccaatgtcaccaaccacaatgtcacccaa 31846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 32008336 - 32008395
Alignment:
Q  670 acacttgtaacattgtcgttgat-aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||| | |||| | ||| |||| |||||||||||||||||||||||||||    
T  32008336 acacttgtaacattttggttggtcaatatcactaatgtcaccaaccacaatgtcacccaa 32008395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 346  Q
    |||||| |||| ||||||||||||||| |  ||| |||||| |||||| |||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 570 - 612
Target Start/End: Original strand, 25818384 - 25818426
Alignment:
Q  570 cacttgggtgacattgatgacgttggccaaccacaatgtcaca 612  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||    
T  25818384 cacttgggtgacattgatgacattggtcaatcacaatgtcaca 25818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 42360265 - 42360299
Alignment:
Q  278 ctacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||||||||||||||||| |||||||    
T  42360265 ctacctcatttcctttgtaaaattttggttgtcac 42360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 26908027 - 26907970
Alignment:
Q  295 taaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||| |||||||  |||||| ||| |||||| ||| |||||||||||||||||    
T  26908027 taaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 39259080 - 39259137
Alignment:
Q  296 aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||| |||||||| ||||||||||  || || ||| ||||||||||||||||||    
T  39259080 aaaattttaattgtcacaaaaattgtcatctaaatggatattcaaataacacaactct 39259137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 39606086 - 39606155
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||| |||||||||| || ||   ||| |||||| ||||||| |||||||||||| |||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaactc 39606155  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 724
Target Start/End: Original strand, 46321433 - 46321490
Alignment:
Q  668 gtacacttgtaacattgtcgttgat-aatgtcaccaatgtcaccaaccacaatgtcac 724  Q
    ||||| |||| ||||||| |||| | |||||||||||| |||||||||||||||||||    
T  46321433 gtacagttgtgacattgtggttggtcaatgtcaccaatatcaccaaccacaatgtcac 46321490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 1e-28; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 52939754 - 52939835
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  52939754 gtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 19149093 - 19149173
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  19149093 gtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

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Target: chr3; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 27541470 - 27541387
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  27541470 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 27541387  T

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Target: chr3; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 38926735 - 38926814
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38926735 cactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactcttt 38926814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 5114185 - 5114265
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||    
T  5114185 cactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactctttt 5114265  T

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Target: chr3; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 5244332 - 5244408
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 348  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||    
T  5244332 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 42357048 - 42356972
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  42357048 cactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 44413363 - 44413283
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  44413363 gtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 47472432 - 47472512
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  47472432 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 44813239 - 44813321
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||| |||||||||||    
T  44813239 gtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 32924245 - 32924169
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  32924245 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 44856056 - 44856140
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||||||||||||||||||||||||||| ||||||   || |||||| |||||| |||||||||||||||||||||||||    
T  44856056 gtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactctttt 44856140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 16969533 - 16969454
Alignment:
Q  273 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||||||||  ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  16969533 tgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 37302649 - 37302732
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||| ||||||||||||| ||||||||||    
T  37302649 gtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactcttt 37302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 52326129 - 52326204
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||||||||||||||||||||||  ||| |||||| |||||| |||||||||||||||||||||||    
T  52326129 tacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 52254102 - 52254025
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||| |||||| ||||||||||| ||||||||||    
T  52254102 cactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 13735837 - 13735913
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||| ||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  13735837 cactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 668 - 728
Target Start/End: Complemental strand, 22893960 - 22893900
Alignment:
Q  668 gtacacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  22893960 gtacacttgtaacattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaa 22893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 24256732 - 24256660
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||| ||||||||||||||||    
T  24256732 tacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 36670982 - 36670902
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||| || ||| |||||| |||||||||||||||||||||    
T  36670982 gtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 42358599 - 42358529
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  42358599 tacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 46624014 - 46624092
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||||||||| ||||||||||||||||||||||| ||| || ||| || ||| |||||||||||||||||||||||    
T  46624014 cactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 26014922 - 26014995
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| || |||||||||| ||||||||||||||    
T  26014922 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 41309224 - 41309301
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||| ||||||||||||||||||||||| ||| || ||  |||||| ||||||||||||||||||||||    
T  41309224 cactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 7934081 - 7934157
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||| ||||| ||||||||||||||||  ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  7934081 cactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 33939345 - 33939424
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||| |||||||||||| | ||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  33939345 cactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 33939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 11512487 - 11512545
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  11512487 acacttgtaacattgtggttggtaatgtcaccaatgtcaccaaccataatgtcacccaa 11512545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 55151674 - 55151604
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||||| ||||| || ||| |||||| ||||||| |||||||||||||||||||||    
T  55151674 tcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 279 - 355
Target Start/End: Complemental strand, 31157638 - 31157562
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||| |||||||||||||||||||||| |||||  || || ||| |||||| ||||||||||||||||||||||||    
T  31157638 tacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactcttt 31157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 35597269 - 35597349
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||||| ||||||  || |||||||||||||||| ||||    
T  35597269 cactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaactttttt 35597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 44383299 - 44383374
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||||||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  44383299 tacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 35377049 - 35376967
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||| ||| |||||| ||||||||||||||| ||||||| ||| ||||||  || || |||||||||||||||||||||||    
T  35377049 gtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 35376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 37503705 - 37503635
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||| ||||||||| ||||||| ||| || ||| ||||||| ||||||||||||||||||||    
T  37503705 ctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 20547958 - 20547901
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatata 329  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||    
T  20547958 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 288833 - 288909
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||| |||||||| ||||||||||||||||||| || | | |||||| |||||| ||| |||||||||||||||||    
T  288833 cactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 279 - 355
Target Start/End: Complemental strand, 13348095 - 13348019
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||||| ||||||||||||||| ||||| | ||| |||||| ||| || ||||||||||||||| ||||||||    
T  13348095 tacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactcttt 13348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 576 - 620
Target Start/End: Original strand, 20286921 - 20286965
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  20286921 ggtgacattgatgacattggccaaccacaatgtcacatgtggctt 20286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 21217622 - 21217697
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  21217622 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 37057018 - 37056943
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| ||||||||||| ||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  37057018 tacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 8847213 - 8847289
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||| ||||||||||  ||||||||||||||||| |||| ||| |||| | |||||| ||||||||||||||||||    
T  8847213 gtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 23592568 - 23592640
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  23592568 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 7668154 - 7668072
Alignment:
Q  273 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||||| || |||||||| | ||||||||| ||||||| ||| |||||| || ||| |||||||||||||||||| ||||||    
T  7668154 tgccactatcttatttcctt-gcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattctttt 7668072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 728
Target Start/End: Original strand, 49159502 - 49159537
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||||||||    
T  49159502 aatgtcaccaatgtcaccaaccacaatgtcacccaa 49159537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 25641551 - 25641465
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaa 358  Q
    |||||| ||||| |||| || ||||||| |||| ||||| | ||| |||||| ||| || ||||||||||||| |||||||||||||    
T  25641551 gtgccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactcttttaa 25641465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 729
Target Start/End: Complemental strand, 29081655 - 29081597
Alignment:
Q  672 acttgtaacattgtcgttgat-aatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    |||||| ||||||| |||| | ||||||||| |||||||||||||||||||||||||||    
T  29081655 acttgtgacattgtggttggtcaatgtcaccgatgtcaccaaccacaatgtcacccaaa 29081597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 44445407 - 44445481
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||| |||| |||||||||| ||||||  ||| |||| | |||||| ||||||||||||||| |||||||||    
T  44445407 ctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactctttt 44445481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 11630707 - 11630642
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 348  Q
    |||||| |||||||||||||| |||||| | |||||||||| ||| ||  ||||||||||||||||    
T  11630707 tcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 23600703 - 23600775
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||| |||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  23600703 tacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 39630577 - 39630504
Alignment:
Q  280 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||| |||| |||||||||||||||||||||   |||||| | | ||| |||||||||||||||||| ||||||    
T  39630577 acctaattttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 693 - 729
Target Start/End: Original strand, 25790897 - 25790933
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    ||||||||||||||||||||||| |||||||||||||    
T  25790897 aatgtcaccaatgtcaccaaccataatgtcacccaaa 25790933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 41505598 - 41505634
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||||||||||||||||||| |||||||    
T  41505598 cactacctcatttcctttgtaaaattttggttgtcac 41505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 304
Target Start/End: Original strand, 45000166 - 45000198
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttg 304  Q
    |||||||||||||||||||||||||||||||||    
T  45000166 gtgccactacctcatttcctttgtaaaattttg 45000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 50318357 - 50318317
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  50318357 gtgccactatctcatttcctttgtaaaattttggttgtcac 50318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 620
Target Start/End: Original strand, 11512386 - 11512448
Alignment:
Q  564 gggtagcacttgggtgacattga------tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  11512386 gggtagcacttgggtgacattgtggttggtgacattggccaaccacaatgtcacatgtggctt 11512448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 729
Target Start/End: Original strand, 36738382 - 36738412
Alignment:
Q  699 accaatgtcaccaaccacaatgtcacccaaa 729  Q
    |||||||||||||||||||||||||||||||    
T  36738382 accaatgtcaccaaccacaatgtcacccaaa 36738412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 566 - 616
Target Start/End: Complemental strand, 48342937 - 48342888
Alignment:
Q  566 gtagcacttgggtgacattgatgacgttggccaaccacaatgtcacatgtg 616  Q
    |||||||||||||||||||| |||| || |||||| |||||||||||||||    
T  48342937 gtagcacttgggtgacattg-tgacattagccaacgacaatgtcacatgtg 48342888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 2e-27; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 410 - 525
Target Start/End: Original strand, 10485023 - 10485137
Alignment:
Q  410 aaccattgatgtgaccataatttaacaaagtgacaatgaagtgcatcagcaaatacccaatagagtattccacacttttcaatttgtcaaacttttgaat 509  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| | | ||| |||||||||||||  | |||||||||||| ||||    
T  10485023 aaccattgatgtgatcataatttaacaaagtgacaatgaagtgcattagc-aataccaagttgagcattccacacttttttaattgtcaaactttcgaat 10485121  T
Q  510 ttccttttggtggtgt 525  Q
    |||||||||| |||||    
T  10485122 ttccttttggaggtgt 10485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 38956586 - 38956506
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  38956586 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 32529820 - 32529745
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||    
T  32529820 cactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 44895540 - 44895460
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| | |||||| ||||||||||||||| |||||    
T  44895540 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 3937091 - 3937008
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||| |||||| || ||| ||||||||||||||||||||||||    
T  3937091 gtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactcttt 3937008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 17272799 - 17272857
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  17272799 acacttgtaacattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaa 17272857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 24614280 - 24614203
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||||||||||||||||||||||||| |||| ||| || ||| ||||||  |||||||||||||||||||||    
T  24614280 cactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 40112922 - 40112841
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||||| |||||||||||||||||||||||||||   || |||| | |||||| ||||||||||||||||||||||    
T  40112922 gtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 43025443 - 43025524
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||| ||||||||||||||||||||||  |||| || ||| |||||| |||||||||||||| ||||||||||||||    
T  43025443 gtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 22918137 - 22918057
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||| || ||| |||| |||||||| |||||||    
T  22918137 gtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 43942743 - 43942818
Alignment:
Q  280 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||| ||||||||||||||| ||| ||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactcttt 43942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 41189504 - 41189428
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatata--gatgttcaaataacacaactct 353  Q
    |||||||||||||||||||||||||||||||||  ||| || ||| |||||||   |||||||||||||||||||||    
T  41189504 tacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 25192881 - 25192802
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||| ||||||||||||||  ||||||| ||| |||||| || |||  || ||||||||||||||||||||    
T  25192881 cactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactcttt 25192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 41989710 - 41989628
Alignment:
Q  272 gtgccactacctcatttccttt--gtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||  |||  ||||||||||| ||||||| ||| || ||| |||||| |||||||||||||||||||||    
T  41989710 gtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 46022228 - 46022153
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  46022228 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 40417884 - 40417957
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||| || ||||||||||||||| ||||| | ||| |||||  ||| ||||||||||||||||||||||||    
T  40417884 tacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 45851164 - 45851095
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||  ||||||  |||||||| | | |||| |||||||||||||||||||||    
T  45851164 tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 7701654 - 7701729
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| ||||| |||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  7701654 tacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 728
Target Start/End: Original strand, 29681896 - 29681931
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||||||||    
T  29681896 aatgtcaccaatgtcaccaaccacaatgtcacccaa 29681931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 31445431 - 31445502
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||| ||||||||||||||||||||  | |||||| ||| ||| |  ||||||||||||||||||||||    
T  31445431 ctcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactct 31445502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 674 - 729
Target Start/End: Original strand, 43500085 - 43500140
Alignment:
Q  674 ttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||| || ||||||    
T  43500085 ttgtaacattgtggttggtaatgtcaccaatatcaccaaccacaatatcgcccaaa 43500140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 712
Target Start/End: Original strand, 29681864 - 29681906
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaa 712  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  29681864 acacttgtaacattgtggttggtaatgtcaccaatgtcaccaa 29681906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 38073323 - 38073363
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  38073323 gtgccaatacctcatttcctttgtaaaattttggttgtcac 38073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 38861199 - 38861239
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  38861199 gtgccactaccttatttactttgtaaaattttgattgtcac 38861239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 46578103 - 46578023
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| |||||| |||| ||| |||||||||| ||||||   ||||| ||| |||||| ||||||||||||| |||||||    
T  46578103 gtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataagacaactc 46578023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 565 - 620
Target Start/End: Original strand, 7211860 - 7211921
Alignment:
Q  565 ggtagcacttgggtgacattga------tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  7211860 ggtagcacttgggtgacattgtggttggtgacattggccaaccacaatgtcacatgtggctt 7211921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 565 - 620
Target Start/End: Original strand, 17272699 - 17272760
Alignment:
Q  565 ggtagcacttgggtgacattga------tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  17272699 ggtagcacttgggtgacattgtggttggtgacattggccaaccacaatgtcacatgtggctt 17272760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 2e-27; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 18258761 - 18258678
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  18258761 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 1671652 - 1671727
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1671652 tacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 26791212 - 26791130
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  26791212 gtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 26791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 14923176 - 14923256
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||| |||||||||||||| || |||||||| |||||| |||||| |||||||||||||||||||||    
T  14923176 gtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 28306100 - 28306020
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  28306100 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 33037627 - 33037703
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  33037627 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 36739055 - 36739133
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||| |||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||||||    
T  36739055 cactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 41321365 - 41321438
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||||||||||||||||    
T  41321365 tacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 351
Target Start/End: Original strand, 13168625 - 13168704
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||  ||||| |||||||||||||    
T  13168625 gtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 1764328 - 1764406
Alignment:
Q  273 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  1764328 tgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 5168286 - 5168367
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||| ||||||||||||||  ||||||| ||| |||||| ||||||  |||||||||||||||||||||    
T  5168286 gtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 668 - 728
Target Start/End: Complemental strand, 5215629 - 5215569
Alignment:
Q  668 gtacacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  5215629 gtacacttgtaacattgtggttggtaatgtcaccaatgttaccaaccacaatgtcacccaa 5215569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 7287153 - 7287077
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||| ||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  7287153 cactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 356
Target Start/End: Complemental strand, 28467417 - 28467337
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||| ||||||||||||| |||||||||| ||||||| |||||||||| ||||||  ||||||| ||||||||||||||||    
T  28467417 cactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactctttt 28467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 2972434 - 2972504
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||||||||||| || |||||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  2972434 tacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 14051283 - 14051202
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| || ||| |||||| ||||||  ||||||||||||||    
T  14051283 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 668 - 724
Target Start/End: Original strand, 36568802 - 36568858
Alignment:
Q  668 gtacacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcac 724  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  36568802 gtacacttgtaacattgtggttgattatgtcactaatgtcaccaaccacaatgtcac 36568858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 13309993 - 13310076
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaataa 362  Q
    |||||||||| |||||||||| |||||||||| | ||||||||||  || || |||||||||||||||||| ||||| ||||||    
T  13309993 tacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaattctttgaaataa 13310076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 39591793 - 39591871
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 360  Q
    ||||||| |||||||||| |||| ||||||| ||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  39591793 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctttgaaat 39591871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 39592185 - 39592263
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 360  Q
    ||||||| |||||||||| |||| ||||||| ||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  39592185 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctttgaaat 39592263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 360
Target Start/End: Original strand, 8687001 - 8687082
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 360  Q
    |||||||||| |||||||||||||||||||| |  ||| |||||| ||||||  ||||||||||||||| |||||| |||||    
T  8687001 tacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactcttgtaaat 8687082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 15479579 - 15479652
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||  ||||||||||||| |||||||| ||| |||||| || ||| |||||||||||||||||||||    
T  15479579 tacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 576 - 620
Target Start/End: Original strand, 1839988 - 1840032
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  1839988 ggtgacattgatgacattggccaaccacaatgtcacatgtggctt 1840032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 7076536 - 7076464
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataa 344  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||    
T  7076536 gtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 17626096 - 17626171
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  17626096 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 35634789 - 35634722
Alignment:
Q  286 tttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||| || |||  ||| |||||| |||||| ||||||||||||||||||||||    
T  35634789 tttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 1274471 - 1274542
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||| |||||||||||||||| ||| ||  ||| |||||| |||||| |||||||||||||||||||||||    
T  1274471 ctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 7552924 - 7552852
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||| ||||| ||||||||| ||||||| ||| ||||||  || || ||||||||||||||||||||||||    
T  7552924 tcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttt 7552852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 620
Target Start/End: Complemental strand, 29385426 - 29385382
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  29385426 ggtgacattggtgacattggccaaccacaatgtcacatgtggctt 29385382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 728
Target Start/End: Complemental strand, 19417479 - 19417444
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||||||||    
T  19417479 aatgtcaccaatgtcaccaaccacaatgtcacccaa 19417444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 678 - 721
Target Start/End: Original strand, 19417552 - 19417595
Alignment:
Q  678 aacattgtcgttgataatgtcaccaatgtcaccaaccacaatgt 721  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  19417552 aacattgtggttggtaatgtcaccaatgtcaccaaccacaatgt 19417595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 728
Target Start/End: Original strand, 29385409 - 29385444
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||||||||    
T  29385409 aatgtcaccaatgtcaccaaccacaatgtcacccaa 29385444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 284 - 351
Target Start/End: Original strand, 42175034 - 42175101
Alignment:
Q  284 catttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||||||| ||||||||||| |||||  ||| ||| || |||||| ||||||||||||||||||||    
T  42175034 catttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 668 - 729
Target Start/End: Complemental strand, 9904229 - 9904167
Alignment:
Q  668 gtacacttgtaacattgtcgttgat-aatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    |||||||||||||||||| |||||| ||| | |||||||||| |||||| |||||||||||||    
T  9904229 gtacacttgtaacattgtggttgatcaatattaccaatgtcaacaaccataatgtcacccaaa 9904167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 22972227 - 22972303
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||| |||| ||||||||||||||  ||||| | ||| |||| | ||| || ||||||||||||||||||||||||    
T  22972227 taccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactcttt 22972303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 669 - 709
Target Start/End: Complemental strand, 25879368 - 25879328
Alignment:
Q  669 tacacttgtaacattgtcgttgataatgtcaccaatgtcac 709  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  25879368 tacacttgtaacattgtggttgataatgtcaccaatatcac 25879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 728
Target Start/End: Complemental strand, 1840005 - 1839970
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||| ||||||||||||||||||||||||||||    
T  1840005 aatgtcatcaatgtcaccaaccacaatgtcacccaa 1839970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 39054701 - 39054768
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaac 350  Q
    |||||| ||||| |||||||||||| |||| ||| ||||||  || || |||||||||||||||||||    
T  39054701 tcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 2e-27; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 272 - 351
Target Start/End: Original strand, 9207693 - 9207772
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  9207693 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 22888785 - 22888703
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  22888785 gtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 9760121 - 9760204
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  9760121 gtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 18254177 - 18254094
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  18254177 gtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 1248789 - 1248871
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1248789 gtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 43487486 - 43487564
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||| |||||| |||||||||||||||||||||||    
T  43487486 cactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 6049313 - 6049236
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  6049313 gtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 42421866 - 42421783
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||    
T  42421866 gtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 42421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 9194344 - 9194428
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||||| | ||||||  ||||||||||||||||||||||||    
T  9194344 gtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactctttt 9194428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 9990797 - 9990877
Alignment:
Q  275 ccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||| ||||||||||||||||||||| |||||||| ||| || ||| |||||| ||||||||||||||||||||||||    
T  9990797 ccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactcttt 9990877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 32477442 - 32477520
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 357  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||||    
T  32477442 tacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctttta 32477520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 3838837 - 3838768
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||||||||||||||||||    
T  3838837 tcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 42091468 - 42091393
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgt--cagatatatagatgttcaaataacacaa 349  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||  || |||||||||||||||||||||||||    
T  42091468 cactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 2076679 - 2076754
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| || ||| |||||||||||||||||||||||    
T  2076679 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 34945058 - 34944979
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||  || ||||| ||||||||||    
T  34945058 gtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 674 - 728
Target Start/End: Original strand, 12918637 - 12918691
Alignment:
Q  674 ttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  12918637 ttgtaacattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaa 12918691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 19633389 - 19633471
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc-agatatatagatgttcaaataacacaactctttta 357  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||||||| |||||||||||| ||||||| ||||    
T  19633389 cactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 19830290 - 19830372
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc-agatatatagatgttcaaataacacaactctttta 357  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||||||| |||||||||||| ||||||| ||||    
T  19830290 cactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19830372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 39819163 - 39819221
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  39819163 acacttgtaatattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaa 39819221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 9647239 - 9647324
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaata 361  Q
    |||||| |||||||||||||||||||||| ||||||| ||| || ||  ||||||  ||||||||||||||||||||||| |||||    
T  9647239 cactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactctttaaaata 9647324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 41042367 - 41042440
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||||||| |||||||||| ||||||  |||||||||| |||||| ||||||||||||||| ||||||||    
T  41042367 ctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 7698274 - 7698354
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||| ||||||||||||||||||| ||| |||| ||| || ||| || ||||||||||| |||||||||||||    
T  7698274 gtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 8848654 - 8848583
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||| ||||| ||||||||||||||||| |||||| |||  || ||||||||||||||||||||||||||    
T  8848654 tcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctt 8848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 21611615 - 21611540
Alignment:
Q  280 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||| ||||| |||||||||||||| ||||||  ||| |||||| |||||| ||||||||||||||||||||||||    
T  21611615 accttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactcttt 21611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 25270543 - 25270468
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| ||||| |||||| ||| || |||||||||||||||||||||||    
T  25270543 tacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 37737929 - 37737858
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||| ||||| ||||||| ||| |||||| |||||| || |||||||||||||||||||    
T  37737929 ctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 41195697 - 41195768
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||||||||||||||||| ||||||| ||| |||| | ||||||  |||||||||||||||||||||    
T  41195697 ctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 17388571 - 17388531
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17388571 gtgccactacctcatttcctttgtaaaattttgattgtcac 17388531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 693 - 736
Target Start/End: Complemental strand, 12918543 - 12918500
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaaaatattat 736  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  12918543 aatgtcaccaatgtcaccaaccacaatgtcacccaaagtattat 12918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 729
Target Start/End: Original strand, 15562304 - 15562363
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||||| |||||||||||||    
T  15562304 acacttgtaacattgtgattggtaatgtcaccaatatcaccaaccataatgtcacccaaa 15562363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 27490687 - 27490617
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||| ||||||||||||||||||||||| ||| ||||||   | || ||||||||||||||||||||||    
T  27490687 tcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 3097819 - 3097747
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  3097819 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 620
Target Start/End: Original strand, 39819080 - 39819124
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  39819080 ggtgacattggtgacattggccaaccacaatgtcacatgtggctt 39819124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 41056708 - 41056636
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  41056708 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 13333127 - 13333056
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  13333127 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 728
Target Start/End: Complemental strand, 39819097 - 39819062
Alignment:
Q  693 aatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||||||||    
T  39819097 aatgtcaccaatgtcaccaaccacaatgtcacccaa 39819062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 620
Target Start/End: Original strand, 12918552 - 12918594
Alignment:
Q  578 tgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  12918552 tgacattggtgacattggccaaccacaatgtcacatgtggctt 12918594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 6511358 - 6511394
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcac 312  Q
    |||||||||||||||||| ||||||||||||||||||    
T  6511358 cactacctcatttcctttataaaattttgattgtcac 6511394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 44287410 - 44287370
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  44287410 gtgccacaacctcatttcctttgtaaaattttggttgtcac 44287370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  297 aaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||| ||| | ||| |||||| ||| ||||||||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 18846733 - 18846795
Alignment:
Q  291 tttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||| ||||||||||||||||  ||||||||||  || || ||||||||||||||| ||||||    
T  18846733 tttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataacataactct 18846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 29349622 - 29349688
Alignment:
Q  285 atttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||| ||||||||||||||||||||||| ||| ||||||  || || |||||| |||||||| ||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 725
Target Start/End: Complemental strand, 13421729 - 13421692
Alignment:
Q  688 ttgataatgtcaccaatgtcaccaaccacaatgtcacc 725  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  13421729 ttgataatgtcatcaatgtcaccaaccacgatgtcacc 13421692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 616
Target Start/End: Original strand, 15562228 - 15562261
Alignment:
Q  583 ttgatgacgttggccaaccacaatgtcacatgtg 616  Q
    |||||||| |||||||||||||||||||||||||    
T  15562228 ttgatgacattggccaaccacaatgtcacatgtg 15562261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 6e-27; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 27465025 - 27464943
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  27465025 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 45333818 - 45333891
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 349  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||||||    
T  45333818 cactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 26469466 - 26469542
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  26469466 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 48470742 - 48470822
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| || ||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  48470742 gtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 649876 - 649955
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||| | ||||||||||||||||||||||||    
T  649876 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 31088284 - 31088366
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  31088284 gtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 45121448 - 45121367
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  45121448 gtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 50754824 - 50754882
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50754824 acacttgtaacattgtggttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 50754882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 44914536 - 44914459
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcac-gaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| |||||| |||||||||||||||||||||    
T  44914536 cactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 668 - 728
Target Start/End: Original strand, 28045417 - 28045477
Alignment:
Q  668 gtacacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  28045417 gtacacttgtaacattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaa 28045477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 50726216 - 50726136
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  50726216 gtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 23645514 - 23645597
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| | ||||||  |||||||||||||| ||||||||    
T  23645514 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactcttt 23645597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 37274997 - 37274918
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||  ||||||||||||||||||||||||    
T  37274997 cactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 19055717 - 19055643
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||||||||||||||||  ||||||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  19055717 ctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttt 19055643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 33100915 - 33100992
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||    
T  33100915 cactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 8350162 - 8350087
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||| |||||||||||||| ||||| ||||||||||| |||||| |||||| |||||||||||||||||||||    
T  8350162 cactaccttatttcctttgtaaa-ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 35369807 - 35369879
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 348  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||    
T  35369807 cactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 670 - 729
Target Start/End: Original strand, 9379918 - 9379977
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  9379918 acacttgtaacattgtggttggtaatgttaccaatgtcaccaaccacaatgtcacccaaa 9379977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 9884941 - 9884999
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  9884941 acacttgtaacattgtggttgataatgtcacgaatgtcaccaaccacaatatcacccaa 9884999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 44519112 - 44519039
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||||| || |||| ||| |||||| ||||||  ||||||||||||||||||||    
T  44519112 tacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 30735256 - 30735180
Alignment:
Q  277 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||||| |||| |||||||||||||||||| |||||| ||| ||| || ||| ||||||||||||||||||    
T  30735256 actacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 37619647 - 37619727
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| |||||||||||||||||||||||||| |||| |  ||| |||||| |||||| ||||||||||||||| |||||    
T  37619647 gtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 45640405 - 45640488
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||| || |||||||| |||||||||||||| |||  || ||| |||||| ||||||||||||||||||||||||||||||||    
T  45640405 gtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactctttt 45640488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 15470019 - 15469945
Alignment:
Q  277 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||| ||||||||| |||||||| |||||| ||| ||||||  ||||||||||||||||||||    
T  15470019 actacctcatttcctttataaaattttaattgtcac-aaaattatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 21401508 - 21401583
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| ||||||||||||||||||||  | ||| |||||| ||| || |||||||||||||||||||||||    
T  21401508 tacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 50932414 - 50932481
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 346  Q
    |||||||||||||||||||||||||| |||| || ||| |||||| |||||| |||||||||||||||    
T  50932414 tacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 3851265 - 3851335
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 346  Q
    |||||||||||||||||| |||||||||| ||||||  ||| |||||| |||||| |||||||||||||||    
T  3851265 cactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 3981984 - 3981914
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||| ||||||||||||||||||||||| ||  |||||| || ||| |||||||||||||||||||||    
T  3981984 ctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 670 - 728
Target Start/End: Complemental strand, 28739371 - 28739313
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||| ||||||||    
T  28739371 acacttgtaacattgtggttggtaatgtcaccaatatcaccaaccacaatatcacccaa 28739313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 37685436 - 37685517
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 357  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||| || |||  |||||||||||||| ||||| ||||    
T  37685436 cactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37685517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 357
Target Start/End: Complemental strand, 37700082 - 37700001
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 357  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||| || |||  |||||||||||||| ||||| ||||    
T  37700082 cactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37700001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 40861230 - 40861154
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 348  Q
    ||||||||| || ||||||||| |||||||||  ||||||| ||| ||| || ||||||||||||||||||||||||    
T  40861230 gtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 43775319 - 43775399
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaataa 362  Q
    ||||||| ||||||||||||||||||||||  ||| |||||| ||||||  || |||||||||||||| |||||| |||||    
T  43775319 ctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtctttttaataa 43775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 18434898 - 18434981
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||| ||| |||||| ||||| ||||||||| ||||||| ||| ||||||  || |||||| ||||||||||||||||||||    
T  18434898 gtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactcttt 18434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 46907305 - 46907380
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||||||||| | ||| |||||  ||| || |||||||||||||||||||||||    
T  46907305 tacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctt 46907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 52576263 - 52576188
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatat-agatgttcaaataacacaactct 353  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||  ||||| |  ||||||||||||||||||||    
T  52576263 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 2571742 - 2571824
Alignment:
Q  276 cactacctcatttcctttgt-aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 357  Q
    ||||||||||||| |||||| ||||||||| ||||||| ||| |||||| ||  || ||||||||||||||||||||| ||||    
T  2571742 cactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactcgttta 2571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 668 - 729
Target Start/End: Complemental strand, 44381978 - 44381916
Alignment:
Q  668 gtacacttgtaacattgtcgttgat-aatgtcaccaatgtcaccaaccacaatgtcacccaaa 729  Q
    |||||| ||||||||||| |||| | |||||||||||| ||||||||||||||||||||||||    
T  44381978 gtacacgtgtaacattgtggttggtcaatgtcaccaatatcaccaaccacaatgtcacccaaa 44381916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 50149060 - 50149134
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 357  Q
    |||||| ||||||||||||||||||||  | ||| |||||| ||| |  ||||||||||||||||||||||||||    
T  50149060 tcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactctttta 50149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 49065332 - 49065253
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||| ||| |||||| ||||||||||||||| || ||   |||||||||| ||| |||||| ||||||||||||||||    
T  49065332 gtgccaatacttcattttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 715
Target Start/End: Complemental strand, 35251235 - 35251189
Alignment:
Q  669 tacacttgtaacattgtcgttgataatgtcaccaatgtcaccaacca 715  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  35251235 tacacttgtaacattgtggttggtaatgtcaccaatatcaccaacca 35251189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 3159479 - 3159516
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgt 309  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3159479 gtgccactacctcatttcctttgtaaaattttggttgt 3159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 19947705 - 19947632
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| ||| |||| |||||||||| ||||| | ||| |||||| ||| ||| ||||||||||||||||||||    
T  19947705 tacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 576 - 620
Target Start/End: Original strand, 9379835 - 9379879
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||| |||  |||||||||||||||||||||||||||||    
T  9379835 ggtgacattggtgatattggccaaccacaatgtcacatgtggctt 9379879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 576 - 620
Target Start/End: Original strand, 9884858 - 9884902
Alignment:
Q  576 ggtgacattgatgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||    
T  9884858 ggtgacattggtgacattggtcaaccacaatgtcacatgtggctt 9884902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 15928133 - 15928097
Alignment:
Q  668 gtacacttgtaacattgtcgttgataatgtcaccaat 704  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15928133 gtacacttgtaacattgtggttgataatgtcaccaat 15928097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 30467483 - 30467419
Alignment:
Q  290 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||  ||||||| ||| |||||| |||  |||||||||||||||||||||||||    
T  30467483 ctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctt 30467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 44382486 - 44382439
Alignment:
Q  564 gggtagcacttgggtgacattgatgacgttggccaaccacaatgtcaca 612  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  44382486 gggtagcacttgggtgacattg-tgacattggccaaccacaatatcaca 44382439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 273 - 352
Target Start/End: Complemental strand, 48103330 - 48103250
Alignment:
Q  273 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatg-ttcaaataacacaactc 352  Q
    ||||| ||||| |||| ||||||||||||||| ||||| | ||| |||||| ||| ||||||| |||||||| ||||||||    
T  48103330 tgccaataccttattttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 620
Target Start/End: Complemental strand, 28739472 - 28739410
Alignment:
Q  564 gggtagcacttgggtgacattga------tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  28739472 gggtagcacttgggtgacattgtggttggtgacattggccaaccacaatgtcacatgtggctt 28739410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 31827064 - 31827135
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||  |||||||||||||| ||||  | ||| ||||||  || |||||||||||||||||||||||||    
T  31827064 ctcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 564 - 621
Target Start/End: Original strand, 4579168 - 4579230
Alignment:
Q  564 gggtagcacttgggtgacattga-----tgacgttggccaaccacaatgtcacatgtggcttc 621  Q
    |||||||||||||||||||| ||     |||| ||||||||||||||||||||| ||||||||    
T  4579168 gggtagcacttgggtgacatagaattggtgacattggccaaccacaatgtcacaagtggcttc 4579230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 4776859 - 4776909
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc 322  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||| |||||    
T  4776859 gtgccactacctcatttcctttataaaatttaaattgtcacaaaagttgtc 4776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 41677258 - 41677220
Alignment:
Q  318 ttgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  41677258 ttgtcacatatatggatgttcaaataacacaactctttt 41677220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 6693267 - 6693300
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||||||||||||||||||| ||||    
T  6693267 tacctcatttcctttgtaaaattttgattatcac 6693300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 12657329 - 12657366
Alignment:
Q  275 ccactacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  12657329 ccactacctcatttcctttataaaattttggttgtcac 12657366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 620
Target Start/End: Complemental strand, 15928204 - 15928171
Alignment:
Q  587 tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||| |||||||||||||||||||||||||||||    
T  15928204 tgacattggccaaccacaatgtcacatgtggctt 15928171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 356
Target Start/End: Complemental strand, 18512304 - 18512227
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    |||||||||| |||| |||||||||  |||||   |||||| ||| ||| || |||||| ||||||||||||||||||    
T  18512304 tacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactctttt 18512227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 26207955 - 26208024
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| ||||| |||||||||||| |||| ||| || | |  || ||||||||||||||||||||||||    
T  26207955 tcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 30570645 - 30570706
Alignment:
Q  290 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    ||||||||||||||||||||  | |||||| ||| ||| ||  |||||||||||||||||||    
T  30570645 ctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 725
Target Start/End: Original strand, 49200057 - 49200114
Alignment:
Q  669 tacacttgtaacattgtcgttgat-aatgtcaccaatgtcaccaaccacaatgtcacc 725  Q
    ||||||||| ||||||| |||| | ||||||| |||| ||||||||||||||||||||    
T  49200057 tacacttgtgacattgtggttggtcaatgtcatcaatatcaccaaccacaatgtcacc 49200114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 620
Target Start/End: Original strand, 50754752 - 50754785
Alignment:
Q  587 tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||| |||||||||||||||||||||||||||||    
T  50754752 tgacattggccaaccacaatgtcacatgtggctt 50754785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 8775 - 8855
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 356  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||| |||||||||||||||||||||||||    
T  8775 cactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctttt 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 1e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 552896 - 552976
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  552896 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 14818035 - 14818115
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  14818035 gtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 33430326 - 33430247
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||  |||| ||||||||||||||||||    
T  33430326 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactcttt 33430247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 670 - 728
Target Start/End: Complemental strand, 2543802 - 2543744
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  2543802 acacttgtaacattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaa 2543744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 277 - 355
Target Start/End: Original strand, 15974716 - 15974794
Alignment:
Q  277 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||| | |||||| ||||||||||||||||||||||||    
T  15974716 actacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 32316889 - 32316815
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  32316889 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 1156823 - 1156904
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    ||||||||| ||||||||||||  ||||||||||||||||| ||| || ||| |||||| ||||||||||||||||||||||    
T  1156823 gtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 11612298 - 11612370
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 351  Q
    |||||||||| |||||||||||||||||| |||| |||||| ||| ||||||| || ||||||||||||||||    
T  11612298 tacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 11448157 - 11448215
Alignment:
Q  670 acacttgtaacattgtcgttgataatgtcaccaatgtcaccaaccacaatgtcacccaa 728  Q
    |||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  11448157 acacttataacattgtggttggtaatgtcaccaatatcaccaaccacaatgtcacccaa 11448215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 13689955 - 13689882
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||| |||||||||  |||||   |||||||||| |||||| |||||||||||||||||||||    
T  13689955 tacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 18737528 - 18737460
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacac 347  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| ||| || ||||||||||||||||    
T  18737528 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 26595459 - 26595535
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||||| ||||||||||||||| ||||  | ||| |||||| ||| || ||||||||||||||||||||||||    
T  26595459 tacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttt 26595535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 31077901 - 31077977
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||| || |||  || |||||||||||||||||    
T  31077901 cactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 16199560 - 16199635
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  16199560 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 34047490 - 34047573
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||| || ||| ||| ||||||||||||||| ||||||| ||| |||||| || ||| ||||||||||||||| ||||||||    
T  34047490 gtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactcttt 34047573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 4820479 - 4820552
Alignment:
Q  281 cctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 354  Q
    |||||||| ||||||||||||||||||||| | ||| || |||  || |||| |||||||||||||||||||||    
T  4820479 cctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 5694112 - 5694039
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||||||||||||||||||||| | ||||| | ||| |||||| ||| ||  ||||| ||||||||||||||    
T  5694112 tacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 277105 - 277174
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| ||||||||||||||| ||||||| ||||||||||  || |   ||||| ||||||||||||||    
T  277105 tcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 620
Target Start/End: Complemental strand, 2543873 - 2543840
Alignment:
Q  587 tgacgttggccaaccacaatgtcacatgtggctt 620  Q
    |||| |||||||||||||||||||||||||||||    
T  2543873 tgacattggccaaccacaatgtcacatgtggctt 2543840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 728
Target Start/End: Original strand, 16193850 - 16193879
Alignment:
Q  699 accaatgtcaccaaccacaatgtcacccaa 728  Q
    ||||||||||||||||||||||||||||||    
T  16193850 accaatgtcaccaaccacaatgtcacccaa 16193879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 22079520 - 22079451
Alignment:
Q  283 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    |||||| ||||| ||||||||| ||||||| ||| | ||||  || || |||||||||||||||||||||    
T  22079520 tcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 24900887 - 24900960
Alignment:
Q  282 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||| |||||||||||||| |||||  | ||  |||||| ||| |  ||||||||||||||||||||||||    
T  24900887 ctcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactcttt 24900960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 76587 - 76504
Alignment:
Q  272 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||| |||||||||||||||||    
T  76587 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactcttt 76504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 406 - 525
Target Start/End: Original strand, 223999 - 224109
Alignment:
Q  406 gtgcaaccattgatgtgaccataatttaacaaagtgacaatgaagtgcatcagcaaatacccaatagagtattccacacttttcaatttgtcaaactttt 505  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||        |||||||||||| ||| |||||||||||||    
T  223999 gtgcagccattgatgtgaccataatttaacaaagtgaaaatgaagtgcatcagc-aatcccc--------attccacactttccaaattgtcaaactttt 224089  T
Q  506 gaatttccttttggtggtgt 525  Q
    |||||||||||||| |||||    
T  224090 gaatttccttttggaggtgt 224109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 223789 - 223878
Alignment:
Q  21 aatcaaaagggtatccactataaacattgtggacgaggtttttt-----------atggtcttctctgcatacccccatctttcattcat 99  Q
    ||||||||| |||||||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  223789 aatcaaaagtgtatccactaaaaacattgtggacgaggttttttatgaggccatcatggtcttctctgcatacccccatctttcattcat 223878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 49402 - 49478
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 352  Q
    ||||||||||||||||||||||||||||| || |||| ||| |||||| |||||| ||||||||||||||| |||||    
T  49402 cactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 11892 - 11966
Alignment:
Q  279 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 353  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||| || ||||||||||||||||| ||||||||    
T  11892 tacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 35630 - 35666
Alignment:
Q  276 cactacctcatttcctttgtaaaattttgattgtcac 312  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35630 cactacctcattttctttgtaaaattttgattgtcac 35666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 20845 - 20786
Alignment:
Q  296 aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 355  Q
    |||||||||||| |||| |||||| |||  || || ||||||||||||||||||||||||    
T  20845 aaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactcttt 20786  T

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