View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5386-Insertion-2 (Length: 1007)

Name: NF5386-Insertion-2
Description: NF5386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5386-Insertion-2
NF5386-Insertion-2
[»] chr2 (38 HSPs)
chr2 (8-983)||(40144655-40145638)
chr2 (767-825)||(11513858-11513916)
chr2 (769-825)||(33942112-33942168)
chr2 (777-827)||(35755552-35755602)
chr2 (764-825)||(10143129-10143190)
chr2 (764-825)||(10563610-10563671)
chr2 (756-825)||(28933773-28933842)
chr2 (862-926)||(12140597-12140661)
chr2 (765-821)||(14666506-14666562)
chr2 (753-825)||(29300591-29300663)
chr2 (764-826)||(1493564-1493626)
chr2 (764-822)||(3673764-3673822)
chr2 (764-830)||(39567860-39567926)
chr2 (756-825)||(43299454-43299524)
chr2 (764-825)||(6988072-6988133)
chr2 (756-825)||(15377714-15377783)
chr2 (835-896)||(39621989-39622050)
chr2 (768-824)||(550467-550523)
chr2 (862-922)||(4350755-4350815)
chr2 (764-827)||(5133729-5133792)
chr2 (764-819)||(36114581-36114636)
chr2 (770-825)||(36863677-36863732)
chr2 (765-823)||(4550735-4550793)
chr2 (771-825)||(5043612-5043666)
chr2 (764-810)||(6546935-6546981)
chr2 (769-827)||(10494630-10494688)
chr2 (764-926)||(13866846-13867007)
chr2 (764-822)||(37053551-37053609)
chr2 (764-814)||(39929824-39929874)
chr2 (764-821)||(11344340-11344397)
chr2 (880-925)||(13869050-13869095)
chr2 (834-883)||(14299615-14299664)
chr2 (764-825)||(17952753-17952814)
chr2 (863-896)||(19978013-19978046)
chr2 (767-824)||(22681238-22681295)
chr2 (765-798)||(40758981-40759014)
chr2 (764-825)||(42592296-42592357)
chr2 (764-825)||(42817428-42817489)
[»] chr3 (36 HSPs)
chr3 (862-946)||(53735893-53735977)
chr3 (767-825)||(31337453-31337511)
chr3 (764-822)||(48397603-48397661)
chr3 (764-825)||(1816540-1816601)
chr3 (764-825)||(10101528-10101589)
chr3 (764-825)||(10212453-10212514)
chr3 (753-825)||(3365351-3365423)
chr3 (764-828)||(33882985-33883049)
chr3 (764-824)||(48323778-48323838)
chr3 (764-827)||(237354-237417)
chr3 (835-925)||(43115094-43115184)
chr3 (764-825)||(28306115-28306176)
chr3 (769-822)||(35364254-35364307)
chr3 (768-825)||(36646434-36646491)
chr3 (764-825)||(42084303-42084364)
chr3 (765-822)||(48364934-48364991)
chr3 (766-825)||(23530236-23530296)
chr3 (767-827)||(32555031-32555091)
chr3 (758-797)||(39971270-39971309)
chr3 (836-927)||(41724251-41724342)
chr3 (782-825)||(42530490-42530533)
chr3 (764-823)||(44061077-44061136)
chr3 (863-926)||(50211801-50211864)
chr3 (764-823)||(51197790-51197848)
chr3 (764-825)||(1217852-1217911)
chr3 (836-894)||(47132033-47132091)
chr3 (764-825)||(10357390-10357451)
chr3 (756-789)||(20192694-20192727)
chr3 (756-825)||(22232775-22232844)
chr3 (764-825)||(24235735-24235796)
chr3 (867-924)||(30573857-30573914)
chr3 (764-821)||(30956682-30956739)
chr3 (764-821)||(30972494-30972551)
chr3 (764-825)||(33405219-33405280)
chr3 (764-825)||(37788817-37788878)
chr3 (764-805)||(42808936-42808977)
[»] chr6 (24 HSPs)
chr6 (764-825)||(4006671-4006732)
chr6 (764-825)||(281900-281961)
chr6 (764-827)||(33787795-33787858)
chr6 (756-798)||(5551411-5551453)
chr6 (770-819)||(11363426-11363475)
chr6 (764-825)||(29274281-29274342)
chr6 (770-825)||(33817823-33817879)
chr6 (764-807)||(9582668-9582711)
chr6 (764-827)||(14492259-14492322)
chr6 (764-827)||(22742323-22742386)
chr6 (749-827)||(4247111-4247189)
chr6 (775-825)||(31776327-31776377)
chr6 (764-825)||(1402953-1403014)
chr6 (764-825)||(2727908-2727969)
chr6 (764-825)||(2735026-2735087)
chr6 (756-789)||(4420566-4420599)
chr6 (766-807)||(8349734-8349775)
chr6 (764-825)||(9093608-9093669)
chr6 (774-827)||(9732443-9732496)
chr6 (764-825)||(10150304-10150365)
chr6 (764-825)||(11340677-11340738)
chr6 (764-797)||(24836279-24836312)
chr6 (764-797)||(29940753-29940786)
chr6 (770-827)||(32386613-32386670)
[»] chr4 (40 HSPs)
chr4 (756-825)||(2996522-2996591)
chr4 (756-825)||(3175900-3175969)
chr4 (749-825)||(17884010-17884086)
chr4 (764-821)||(10192241-10192298)
chr4 (764-827)||(25885816-25885879)
chr4 (765-821)||(18630638-18630694)
chr4 (764-820)||(42321936-42321992)
chr4 (761-825)||(49085943-49086007)
chr4 (764-824)||(49219096-49219156)
chr4 (765-825)||(52746892-52746952)
chr4 (767-814)||(46013363-46013410)
chr4 (764-825)||(437484-437545)
chr4 (764-817)||(4071839-4071892)
chr4 (764-825)||(24160547-24160608)
chr4 (756-825)||(51630060-51630129)
chr4 (764-825)||(53626733-53626794)
chr4 (764-825)||(55870393-55870454)
chr4 (775-827)||(927260-927312)
chr4 (764-824)||(24929450-24929510)
chr4 (765-825)||(46796976-46797036)
chr4 (867-926)||(18628494-18628553)
chr4 (772-827)||(32920450-32920505)
chr4 (767-814)||(46247178-46247225)
chr4 (766-825)||(52735081-52735140)
chr4 (765-824)||(56480306-56480365)
chr4 (836-926)||(4691887-4691977)
chr4 (774-824)||(6927546-6927596)
chr4 (764-821)||(8422895-8422950)
chr4 (772-818)||(13949903-13949949)
chr4 (758-824)||(27043883-27043949)
chr4 (835-897)||(37575906-37575968)
chr4 (764-825)||(8130131-8130192)
chr4 (764-825)||(11802491-11802552)
chr4 (766-827)||(18628593-18628654)
chr4 (771-824)||(22471295-22471348)
chr4 (764-825)||(23459585-23459646)
chr4 (770-819)||(25434518-25434567)
chr4 (764-825)||(30207623-30207683)
chr4 (756-789)||(41701529-41701562)
chr4 (764-825)||(43372021-43372082)
[»] chr7 (34 HSPs)
chr7 (761-825)||(1417218-1417282)
chr7 (756-818)||(29274888-29274952)
chr7 (767-824)||(30456503-30456560)
chr7 (770-824)||(31338471-31338525)
chr7 (764-825)||(5006561-5006622)
chr7 (753-821)||(5373171-5373239)
chr7 (777-825)||(29278629-29278677)
chr7 (862-914)||(36537973-36538025)
chr7 (764-823)||(49060497-49060556)
chr7 (775-821)||(28340452-28340498)
chr7 (764-825)||(9527142-9527203)
chr7 (764-817)||(28613594-28613647)
chr7 (764-821)||(45813236-45813293)
chr7 (862-926)||(23214920-23214984)
chr7 (769-825)||(27548225-27548281)
chr7 (764-812)||(35536064-35536112)
chr7 (835-927)||(36598296-36598388)
chr7 (778-837)||(44821930-44821990)
chr7 (766-825)||(21453253-21453312)
chr7 (764-819)||(25511584-25511639)
chr7 (764-827)||(34083575-34083638)
chr7 (764-807)||(39591537-39591580)
chr7 (761-820)||(45777228-45777287)
chr7 (836-926)||(24967100-24967190)
chr7 (836-926)||(25670527-25670617)
chr7 (770-819)||(946715-946764)
chr7 (761-818)||(5010527-5010584)
chr7 (772-825)||(12110325-12110378)
chr7 (774-827)||(15309615-15309668)
chr7 (764-825)||(17989075-17989136)
chr7 (753-786)||(20526392-20526425)
chr7 (764-809)||(31341151-31341196)
chr7 (767-824)||(38010674-38010731)
chr7 (764-821)||(48157176-48157233)
[»] chr8 (26 HSPs)
chr8 (761-827)||(34551074-34551140)
chr8 (768-825)||(34770853-34770910)
chr8 (764-825)||(42597358-42597419)
chr8 (766-827)||(30627952-30628013)
chr8 (774-825)||(6864511-6864562)
chr8 (761-824)||(38561680-38561743)
chr8 (862-923)||(2487952-2488013)
chr8 (772-825)||(6509355-6509408)
chr8 (764-821)||(29699211-29699268)
chr8 (867-936)||(40280157-40280226)
chr8 (862-926)||(4560567-4560631)
chr8 (761-809)||(8066909-8066957)
chr8 (771-827)||(12361156-12361212)
chr8 (770-825)||(26473804-26473860)
chr8 (764-811)||(8823459-8823506)
chr8 (761-800)||(20672726-20672765)
chr8 (768-819)||(45071163-45071214)
chr8 (844-926)||(1561324-1561406)
chr8 (764-798)||(14482159-14482193)
chr8 (770-827)||(35534663-35534718)
chr8 (766-827)||(787156-787217)
chr8 (765-822)||(2093237-2093294)
chr8 (784-825)||(7645955-7645996)
chr8 (834-926)||(24326070-24326160)
chr8 (836-913)||(31884632-31884708)
chr8 (774-822)||(35928750-35928799)
[»] chr1 (36 HSPs)
chr1 (763-825)||(30371104-30371166)
chr1 (764-825)||(49517027-49517088)
chr1 (756-824)||(40304107-40304175)
chr1 (767-825)||(27738232-27738290)
chr1 (756-825)||(1393071-1393140)
chr1 (764-825)||(4200186-4200247)
chr1 (764-825)||(28467359-28467420)
chr1 (764-824)||(34179925-34179985)
chr1 (764-827)||(6933011-6933074)
chr1 (765-824)||(7218127-7218186)
chr1 (765-820)||(36151562-36151617)
chr1 (776-825)||(25006086-25006135)
chr1 (764-797)||(50319249-50319282)
chr1 (764-824)||(7273992-7274052)
chr1 (764-816)||(15360851-15360903)
chr1 (764-823)||(17422992-17423052)
chr1 (764-824)||(46980182-46980242)
chr1 (765-825)||(47002926-47002986)
chr1 (770-825)||(4548684-4548739)
chr1 (770-825)||(5592737-5592792)
chr1 (756-799)||(6265043-6265086)
chr1 (764-823)||(28689508-28689567)
chr1 (764-827)||(36070207-36070270)
chr1 (764-827)||(48064266-48064329)
chr1 (764-823)||(49557098-49557157)
chr1 (767-825)||(17269210-17269268)
chr1 (767-820)||(3062960-3063013)
chr1 (768-825)||(5421972-5422029)
chr1 (768-825)||(10581129-10581186)
chr1 (764-797)||(14737785-14737818)
chr1 (862-927)||(23373253-23373318)
chr1 (764-825)||(25479538-25479599)
chr1 (772-825)||(33186009-33186062)
chr1 (765-834)||(43420216-43420285)
chr1 (764-824)||(44940300-44940358)
chr1 (764-805)||(46499926-46499967)
[»] scaffold0092 (1 HSPs)
scaffold0092 (761-827)||(40185-40251)
[»] chr5 (23 HSPs)
chr5 (764-825)||(12407713-12407774)
chr5 (764-825)||(18704088-18704148)
chr5 (764-824)||(4855655-4855715)
chr5 (862-926)||(11095436-11095500)
chr5 (864-927)||(14599312-14599375)
chr5 (764-829)||(10303758-10303821)
chr5 (767-825)||(32172613-32172671)
chr5 (769-827)||(36539708-36539766)
chr5 (771-825)||(41277402-41277456)
chr5 (764-825)||(14295463-14295524)
chr5 (761-825)||(39823173-39823237)
chr5 (770-825)||(10272483-10272538)
chr5 (764-819)||(28586824-28586879)
chr5 (774-825)||(34205206-34205257)
chr5 (764-827)||(42181142-42181205)
chr5 (769-827)||(9202798-9202856)
chr5 (768-825)||(18543248-18543306)
chr5 (767-825)||(40159779-40159837)
chr5 (764-825)||(41957503-41957562)
chr5 (899-944)||(13605296-13605341)
chr5 (764-805)||(32969189-32969230)
chr5 (764-836)||(37526239-37526312)
chr5 (764-836)||(37588400-37588473)
[»] scaffold0024 (1 HSPs)
scaffold0024 (764-824)||(27533-27593)
[»] scaffold0053 (1 HSPs)
scaffold0053 (761-827)||(5640-5706)
[»] scaffold0110 (1 HSPs)
scaffold0110 (867-922)||(4168-4223)
[»] scaffold0049 (1 HSPs)
scaffold0049 (761-824)||(58146-58209)
[»] scaffold0549 (2 HSPs)
scaffold0549 (764-825)||(1776-1837)
scaffold0549 (764-825)||(3866-3927)


Alignment Details
Target: chr2 (Bit Score: 844; Significance: 0; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 844; E-Value: 0
Query Start/End: Original strand, 8 - 983
Target Start/End: Original strand, 40144655 - 40145638
Alignment:
Q  8 ataacatgttgaattaatcatgattataaggaattaataggcaagaaaacattgcttaatttatgaaattatgatttttctcataaggtatagtatttat 107  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40144655 ataacatgttgaattattcattattataaggaattaataggcaagaaaacattgcttaatttataaaattatgatttttctcataaggtatagtatttat 40144754  T
Q  108 gtgttgaaggaaaatcttttgatggaaataccctgcaagtcatcagaagaatcttgttcatcatcatcaaatgattttgttgcaataaagatgccattaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40144755 gtgttgaaggaaaatcttttgatggaaataccctgcaagtcatcagaagaatcttgttcatcatcatcaaatgattttgttgcaataaagatgccattaa 40144854  T
Q  208 caccaagtccaccttcaacacaaaggagggtgaattttcttgtgacatcacgttctgttgatgcaccaattgataataatatcaatcttggaatttcaac 307  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40144855 caccaagtccaccttcaacacaaaggagggtgaattttcttgttacatcacgttctgttgatgcaccaattgataataatatcaatcttggaatttcaac 40144954  T
Q  308 ---aagagcaaaatcatcatcaaatagaagtatattaccaaaattgaacttcaggtataataggacttcatcatcggatattgaaaaggcggtaattgga 404  Q
       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40144955 aacaagagcaaaatcatcatcaaatagaagtatattaccaaaattgaatttcaggtataataggacttcatcatcggatattgaaaaggcggtaattgga 40145054  T
Q  405 gcgccagcgccagaaagttcttttgtagggcctcatgagaagccttcaatctcaggatcagtgtctttgagtaagatatttaatcctaagattaatagga 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40145055 gcgccagcgccagaaagttcttttgtagggcctcatgagaagccttcaatctcaggatcagtgtctttgagtaagatatttaatcctaagattaatagga 40145154  T
Q  505 cttcatcattacctgttgaagaaattggacgtgttaacactgagtttgcttttggtggatgtcttggtgcttctccttatgtaaggcccttaattgatta 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40145155 cttcatcattacctgttgaagaaattggacgtgttaacactgagtttgcttttggtggatgtcttggtgcttctccttatgtaaggcctttaattgatta 40145254  T
Q  605 gtacttttaatttcaactttaaaagattgnnnnnnnatgtgcaattaattaatgggtatcttgtattttcattaattagtatggtcctgtttcgacaaac 704  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  40145255 gtacttttaatttcaactttaaaagattgtttttttatgtgcaattaattaatgggtatcttgtattttcattaactactatggtcctgtttcgacaaac 40145354  T
Q  705 agcttaattaattaagcgcttata-------------atataagtggttatgtgtattgtgtatgctacttatataacaaaagataaaataaagtcaagt 791  Q
    ||||||||||||||||||||||||             |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  40145355 agcttaattaattaagcgcttataataagcgcttatcatataagtggttatgtgtattgtgtatgc--------taacaaaagataaaataaagtcaagt 40145446  T
Q  792 tgtttttatgtaagttataagttgttttcataagttttctggagaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctc 891  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40145447 tgtttttatgtaagttataagttgttttcataagctttctggagaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctc 40145546  T
Q  892 aaacaagctcataagtgtttatgtcagtagataagtcaatccaaagagaccctaatttgaacatactaaggatttaaatatttgctgaattt 983  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40145547 aaacaagctcataagtgtttatgtcagtagataagtcaatccaaagagaccctaatttgaacatactaaggatataaatatttgctgaattt 40145638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 767 - 825
Target Start/End: Original strand, 11513858 - 11513916
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataag 11513916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 33942112 - 33942168
Alignment:
Q  769 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataag 33942168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 777 - 827
Target Start/End: Complemental strand, 35755602 - 35755552
Alignment:
Q  777 aaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  35755602 aaaataaagtcaaattgttttcatgtaagctataagttgttttcataagtt 35755552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 10143129 - 10143190
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||| |||||||  ||||||||| |||| |||||||| ||||||||||    
T  10143129 tataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataag 10143190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 10563671 - 10563610
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||  ||| ||| || |||||||| ||||||||||||||||||||||||||    
T  10563671 tataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataag 10563610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 756 - 825
Target Start/End: Original strand, 28933773 - 28933842
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||||||||||||||||| || |||| || |||| || |||||||||| |||||||||||||    
T  28933773 gctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataag 28933842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 862 - 926
Target Start/End: Original strand, 12140597 - 12140661
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||| |||||||||||  |||||||||||||||| |  || ||||||||||||||||||||||||    
T  12140597 atgtcataagttgttttcataagttctctcaaactatttcgtaagtgtttatgtcagtagataag 12140661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 821
Target Start/End: Original strand, 14666506 - 14666562
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    |||||||||||||||||||||||||  || ||| || ||||||||||||||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttca 14666562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 825
Target Start/End: Original strand, 29300591 - 29300663
Alignment:
Q  753 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||| || || || ||||||||||||||||   | ||||||| |||||||||||||||||||||||||||    
T  29300591 tatgctatttctacaataaaagataaaataaaggtgaattgttttcatgtaagttataagttgttttcataag 29300663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 764 - 826
Target Start/End: Complemental strand, 1493626 - 1493564
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagt 826  Q
    |||||||| ||||||||||||||| ||||||||| || |||| |||| | |||||||||||||    
T  1493626 tataacaatagataaaataaagtctagttgttttcatataagctatatgctgttttcataagt 1493564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 764 - 822
Target Start/End: Original strand, 3673764 - 3673822
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 822  Q
    |||||||||| |||||||||||| || ||||||| || ||||||||||||| |||||||    
T  3673764 tataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcat 3673822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 764 - 830
Target Start/End: Original strand, 39567860 - 39567926
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttttc 830  Q
    ||||||||||||||||||||||| || ||||||  |  |||| |||||| |||||||||||||||||    
T  39567860 tataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataagttttc 39567926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 756 - 825
Target Start/End: Complemental strand, 43299524 - 43299454
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagt-tataagttgttttcataag 825  Q
    |||| |||||||||| ||||||||||||||||||  ||||||| | ||| | |||||||||||||||||||    
T  43299524 gctatttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataag 43299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 6988072 - 6988133
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||| || ||||  |   ||||||||||||||||||||||    
T  6988072 tataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataag 6988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 756 - 825
Target Start/End: Original strand, 15377714 - 15377783
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||| |||| |||| ||||||||||||| |  ||||||| || ||||||||||| ||||||||||||    
T  15377714 gctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataag 15377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 835 - 896
Target Start/End: Original strand, 39621989 - 39622050
Alignment:
Q  835 gaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaaca 896  Q
    ||||||||| ||||||||||||||  | ||| |||||||||||  |||||||||||||||||    
T  39621989 gaaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaaca 39622050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 768 - 824
Target Start/End: Original strand, 550467 - 550523
Alignment:
Q  768 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||||||||||||||||||  ||  ||| ||||||| ||||||||||    
T  550467 acaaaagataaaataaagtcaagttgtttccatacaagatataagtagttttcataa 550523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 862 - 922
Target Start/End: Original strand, 4350755 - 4350815
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtaga 922  Q
    |||| ||||| |||||  |||||||||||||||||| ||| |||||| |||||||||||||    
T  4350755 atgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtaga 4350815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 5133729 - 5133792
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||||||||||  ||  ||||||||| |||| |||||| |||||||| |||||    
T  5133729 tataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagtt 5133792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 819
Target Start/End: Complemental strand, 36114636 - 36114581
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    ||||||||||||||||||||||| || |||||||| | ||||  ||||||||||||    
T  36114636 tataacaaaagataaaataaagttaaattgtttttgtataagcaataagttgtttt 36114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 825
Target Start/End: Complemental strand, 36863732 - 36863677
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||    ||||||| |||||||||| |||||||||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataag 36863677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 765 - 823
Target Start/End: Original strand, 4550735 - 4550793
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    |||| |||||||||||||| |||||| |||||| || |||  |||||||||||||||||    
T  4550735 ataataaaagataaaataacgtcaagctgttttcatataaactataagttgttttcata 4550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 771 - 825
Target Start/End: Complemental strand, 5043666 - 5043612
Alignment:
Q  771 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||  |||||| || |||| || ||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataag 5043612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 810
Target Start/End: Original strand, 6546935 - 6546981
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttata 810  Q
    |||||||||||||||||||||||||| |||||| ||| |||| ||||    
T  6546935 tataacaaaagataaaataaagtcaaattgtttatatataagctata 6546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 827
Target Start/End: Original strand, 10494630 - 10494688
Alignment:
Q  769 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||| ||||||||||||| || |||||||| | || | |||||||||||||||||||||    
T  10494630 caaatgataaaataaagtgaaattgtttttgtttatggtataagttgttttcataagtt 10494688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 926
Target Start/End: Original strand, 13866846 - 13867007
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttttctggagaaataagcggaaaacaatttatggttat 863  Q
    |||| ||||||||||||| |||||||  ||||||||| |||  |||||| | ||||||| || | ||  || |||||||| |||| ||   ||| |  ||    
T  13866846 tatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcattagctatcctga-aaataagctgaaatcagcatataggcat 13866944  T
Q  864 gttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    || ||| |||||||   ||||||||||||||||  |||| ||||||||||| |||||||||||    
T  13866945 gtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataag 13867007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 822
Target Start/End: Original strand, 37053551 - 37053609
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 822  Q
    ||||||| || |||||||||||||||  |||||| || ||||||||||||| |||||||    
T  37053551 tataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcat 37053609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 814
Target Start/End: Original strand, 39929824 - 39929874
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 814  Q
    |||||||||||||||||| || |||| |||||||||| |||| ||||||||    
T  39929824 tataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 821
Target Start/End: Complemental strand, 11344397 - 11344340
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    ||||||||||||||||| |||||||| ||||||| ||  ||| ||||| |||||||||    
T  11344397 tataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 880 - 925
Target Start/End: Complemental strand, 13869095 - 13869050
Alignment:
Q  880 ataagttctctcaaacaagctcataagtgtttatgtcagtagataa 925  Q
    ||||||||||||||| |  |||||||||| ||||||||||||||||    
T  13869095 ataagttctctcaaatagtctcataagtgcttatgtcagtagataa 13869050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 834 - 883
Target Start/End: Complemental strand, 14299664 - 14299615
Alignment:
Q  834 agaaataagcggaaaacaatttatggttatgttataagttgtttcgataa 883  Q
    |||||||||| ||||||||| ||||| ||||| |||||||||||| ||||    
T  14299664 agaaataagctgaaaacaatgtatggatatgtcataagttgtttccataa 14299615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 17952814 - 17952753
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||||||  | |||| || |||| || ||| ||||||||||||    
T  17952814 tataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataag 17952753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 863 - 896
Target Start/End: Original strand, 19978013 - 19978046
Alignment:
Q  863 tgttataagttgtttcgataagttctctcaaaca 896  Q
    |||||||||||||||| |||||||||||||||||    
T  19978013 tgttataagttgtttctataagttctctcaaaca 19978046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 824
Target Start/End: Complemental strand, 22681295 - 22681238
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||| |||| ||| ||||||| || |||| |||||| |||||||||||    
T  22681295 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataa 22681238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 798
Target Start/End: Original strand, 40758981 - 40759014
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgttttt 798  Q
    ||||||||||||||||||||||||| ||||||||    
T  40758981 ataacaaaagataaaataaagtcaaattgttttt 40759014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 42592296 - 42592357
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||||||||| |||| || ||||||| || |||| |||||| ||||||||||||    
T  42592296 tataccaaaagataaaattaagttaacttgttttcatataagctataagctgttttcataag 42592357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 42817489 - 42817428
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||||||||| |||||||| |||||| || ||||| ||||  ||||||||||||    
T  42817489 tataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataag 42817428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 862 - 946
Target Start/End: Complemental strand, 53735977 - 53735893
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagtcaatccaaagagaccctaa 946  Q
    |||| |||||||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||| |||||||||    
T  53735977 atgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagttaatccaaacagaccctaa 53735893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 767 - 825
Target Start/End: Complemental strand, 31337511 - 31337453
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||    
T  31337511 aacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataag 31337453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 764 - 822
Target Start/End: Original strand, 48397603 - 48397661
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 822  Q
    ||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  48397603 tataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcat 48397661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 1816540 - 1816601
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||| ||||||||||||||||||||  ||||||| | |||| |||||||||||||||||||    
T  1816540 tataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataag 1816601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 10101589 - 10101528
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || ||||||| || |||| || ||||||||||||||||    
T  10101589 tataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataag 10101528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 10212514 - 10212453
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || ||||||| || |||| || ||||||||||||||||    
T  10212514 tataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataag 10212453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 825
Target Start/End: Original strand, 3365351 - 3365423
Alignment:
Q  753 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||| || ||||||| |||||||||| |||||||||||||||||| ||| || |||  ||||||||||||    
T  3365351 tatgctatttctataacataagataaaattaagtcaagttgtttttatataaattgtaaactgttttcataag 3365423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 828
Target Start/End: Original strand, 33882985 - 33883049
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttt 828  Q
    ||||||||||||||||||||||| || || |||||||| |||||||||| | |||||||| ||||    
T  33882985 tataacaaaagataaaataaagtgaaattatttttatgcaagttataagctattttcataggttt 33883049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 48323778 - 48323838
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||| ||||||||| |||||||||| |||||||| |||||| ||||| ||||||||||||    
T  48323778 tataataaaagataatataaagtcaaattgtttttctgtaagctataaattgttttcataa 48323838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 237354 - 237417
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||| ||||||||||||| | || || | || |||||||||||||||||||||||||||||    
T  237354 tataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttcataagtt 237417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 925
Target Start/End: Original strand, 43115094 - 43115184
Alignment:
Q  835 gaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataa 925  Q
    ||||||||| |||||||| ||||||  |||| |||||||||||| ||||  |||  ||||||| |||| ||||| |||||||| |||||||    
T  43115094 gaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatgtcaatagataa 43115184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 28306115 - 28306176
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||  ||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  28306115 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 28306176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 35364254 - 35364307
Alignment:
Q  769 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 822  Q
    |||||| ||||||||||| || || ||||||| |||||||||||||||||||||    
T  35364254 caaaaggtaaaataaagttaaattatttttatataagttataagttgttttcat 35364307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 825
Target Start/End: Complemental strand, 36646491 - 36646434
Alignment:
Q  768 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||  | ||||||| || |||||||||| |||||||||||||    
T  36646491 acaaaagataaaataaagtataattgttttcatataagttataacttgttttcataag 36646434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 42084364 - 42084303
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||| |||||||||| ||||| ||||||| || |||| ||| |||||||||||||||    
T  42084364 tataacaaaggataaaataatgtcaacttgttttgatataagctattagttgttttcataag 42084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 765 - 822
Target Start/End: Complemental strand, 48364991 - 48364934
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 822  Q
    ||||||||||||||||||||||||| ||||||| || || |  |||||||||||||||    
T  48364991 ataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcat 48364934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 825
Target Start/End: Complemental strand, 23530296 - 23530236
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgttttt-atgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||| || ||||| || |||  |||||||||||||||||||    
T  23530296 taacaaaagataaaataaagtcaaattatttttcatataaagtataagttgttttcataag 23530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 767 - 827
Target Start/End: Complemental strand, 32555091 - 32555031
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||||||||||| || ||||  | |||| |||||||||||||||| ||||    
T  32555091 aacaaaagataaaataaagtcaaattattttcctataagctataagttgttttcatgagtt 32555031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 797
Target Start/End: Original strand, 39971270 - 39971309
Alignment:
Q  758 tacttatataacaaaagataaaataaagtcaagttgtttt 797  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  39971270 tacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 927
Target Start/End: Original strand, 41724251 - 41724342
Alignment:
Q  836 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagt 927  Q
    |||||||| |||||||| ||||||  |||| |||||||||||| ||||||| || |||||   || | ||||  ||||||||||||||||||    
T  41724251 aaataagctgaaaacaacttatggacatgtcataagttgtttccataagttttcacaaactgtctgacaagtacttatgtcagtagataagt 41724342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 825
Target Start/End: Original strand, 42530490 - 42530533
Alignment:
Q  782 aaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||    
T  42530490 aaagtcaagttgtttttatataagttgtaagatgttttcataag 42530533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 823
Target Start/End: Complemental strand, 44061136 - 44061077
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    |||| ||||||||||||||| || || |||||||| | |||| |||||||||||||||||    
T  44061136 tatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcata 44061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 863 - 926
Target Start/End: Original strand, 50211801 - 50211864
Alignment:
Q  863 tgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||||||||||||||  |||||||||||||||||  || | ||||| |||||| ||||||||||    
T  50211801 tgttataagttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataag 50211864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 823
Target Start/End: Complemental strand, 51197848 - 51197790
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    |||||||||||||| | ||||| ||| ||||||| || ||||||||||||||||||||||    
T  51197848 tataacaaaagataga-taaagacaaattgttttcatataagttataagttgttttcata 51197790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 1217911 - 1217852
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||  |||| |||| || ||||||| |||||||||||||| ||||||||||||    
T  1217911 tataacaaaaga--aaatgaagttaaattgttttcatgtaagttataagctgttttcataag 1217852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 836 - 894
Target Start/End: Original strand, 47132033 - 47132091
Alignment:
Q  836 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaa 894  Q
    |||||||| ||||||| ||||||| ||||  |||||||||||  |||||||||||||||    
T  47132033 aaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaa 47132091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 10357390 - 10357451
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||| || || || |||| || |||| || ||||||||||||||||    
T  10357390 tataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcataag 10357451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 789
Target Start/End: Complemental strand, 20192727 - 20192694
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaa 789  Q
    |||| |||||||||||||||||||||||||||||    
T  20192727 gctatttatataacaaaagataaaataaagtcaa 20192694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 825
Target Start/End: Original strand, 22232775 - 22232844
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| |||||||||||| ||||||||||||||||  |||||| || |||||  |||| | ||||||||||    
T  22232775 gctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataag 22232844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 24235796 - 24235735
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| ||||||||||  | |||  || |||| |||||||||||||||||||    
T  24235796 tataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataag 24235735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 867 - 924
Target Start/End: Complemental strand, 30573914 - 30573857
Alignment:
Q  867 ataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagata 924  Q
    |||| ||||||  |||||||||| ||||||| |||| ||||| |||||||||||||||    
T  30573914 ataatttgttttcataagttctcacaaacaaactcacaagtgcttatgtcagtagata 30573857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 821
Target Start/End: Complemental strand, 30956739 - 30956682
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    |||| |||||||||||||||||| || |||||||| | || | |||||||||||||||    
T  30956739 tatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30956682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 821
Target Start/End: Complemental strand, 30972551 - 30972494
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    |||| |||||||||||||||||| || |||||||| | || | |||||||||||||||    
T  30972551 tatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 33405280 - 33405219
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| |||||| ||||||||||| || ||||||| || |||| |||||| ||||||||||||    
T  33405280 tatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataag 33405219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 37788817 - 37788878
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||| | || ||||  | |||  |||||||||||||||||||    
T  37788817 tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataag 37788878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 805
Target Start/End: Original strand, 42808936 - 42808977
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaag 805  Q
    ||||||||||||||||||||||| || |||||||||| ||||    
T  42808936 tataacaaaagataaaataaagttaaattgtttttatataag 42808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 1e-16; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 4006671 - 4006732
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  4006671 tataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataag 4006732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 281961 - 281900
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||| ||||||| || |||| |||||| ||| ||||||||    
T  281961 tataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataag 281900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 764 - 827
Target Start/End: Complemental strand, 33787858 - 33787795
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||| |||||| |||||||| ||| ||| || ||||||||||| ||||||||||||||    
T  33787858 tataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagtt 33787795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 756 - 798
Target Start/End: Original strand, 5551411 - 5551453
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgttttt 798  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  5551411 gctatttatataacaaaagataaaataaagtcaaattgttttt 5551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 819
Target Start/End: Complemental strand, 11363475 - 11363426
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    ||||||||||||||||| || || |||| |||||||||||||||||||||    
T  11363475 aaaagataaaataaagttaaattattttcatgtaagttataagttgtttt 11363426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 29274342 - 29274281
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||||||||||||||||| ||||||| || |||| |||||  ||||||||||||    
T  29274342 tatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 770 - 825
Target Start/End: Complemental strand, 33817879 - 33817823
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaa-gttataagttgttttcataag 825  Q
    ||||||||||||||||| ||  |||||| |||||| |||||||||||||||||||||    
T  33817879 aaaagataaaataaagtaaacctgttttcatgtaaagttataagttgttttcataag 33817823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 807
Target Start/End: Complemental strand, 9582711 - 9582668
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagtt 807  Q
    ||||||||||||||||||||||| || |||||||||| ||||||    
T  9582711 tataacaaaagataaaataaagtgaaattgtttttatataagtt 9582668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 14492259 - 14492322
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||| ||||||||||||| ||||||| ||||||| ||  ||| |||||| ||||||||||||||    
T  14492259 tataccaaaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcataagtt 14492322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 22742323 - 22742386
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||| |||||||||||||||| ||||||| || |||| |||||| | |||| |||||||    
T  22742323 tataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataagtt 22742386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 749 - 827
Target Start/End: Complemental strand, 4247189 - 4247111
Alignment:
Q  749 tgtgtatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||| |||| || ||||||||||||||||||| |||     |||||| || ||||||||||| ||||||||||||||    
T  4247189 tgtgtaagctatttctataacaaaagataaaatagagttggtctgttttcatataagttataagctgttttcataagtt 4247111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 775 - 825
Target Start/End: Complemental strand, 31776377 - 31776327
Alignment:
Q  775 ataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| |||||||| | ||| | ||||||||||||||||||    
T  31776377 ataaaataaagtcaaattgtttttgtataattaataagttgttttcataag 31776327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 1402953 - 1403014
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| ||  | |||| || |||| ||||| |||||||||||||    
T  1402953 tataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataag 1403014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 2727969 - 2727908
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||  ||| |||| |||| || || |||| |||||||||||||||||||    
T  2727969 tataacaaaagataaacaaaaatcaaattgtattgatataagctataagttgttttcataag 2727908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 2735026 - 2735087
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || || ||||| | |||  |||||| ||||||||||||    
T  2735026 tataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataag 2735087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 789
Target Start/End: Original strand, 4420566 - 4420599
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaa 789  Q
    ||||||| ||||||||||||||||||||||||||    
T  4420566 gctacttctataacaaaagataaaataaagtcaa 4420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 807
Target Start/End: Complemental strand, 8349775 - 8349734
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgtttttatgtaagtt 807  Q
    ||||||||||||||||||||| || |||||||||| ||||||    
T  8349775 taacaaaagataaaataaagttaaattgtttttatataagtt 8349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 9093669 - 9093608
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| |||||||||||||||||| || |||||||  | |||| |||||| ||||||||||||    
T  9093669 tatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataag 9093608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 9732443 - 9732496
Alignment:
Q  774 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||| ||||||| ||||||| ||| ||| ||||||||||||||| |||||    
T  9732443 gataaaattaagtcaaattgttttcatgcaaggtataagttgttttcacaagtt 9732496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 10150365 - 10150304
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||| ||||||| || |||| ||||||| || | ||||||||| ||||||||||||    
T  10150365 tataacaaaatataaaatcaaatcaaattgttttcatatcagttataagatgttttcataag 10150304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 11340738 - 11340677
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || || |||| || || | ||||||||| |||||||||    
T  11340738 tataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataag 11340677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 797
Target Start/End: Complemental strand, 24836312 - 24836279
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttt 797  Q
    |||||||||||||||||||||||||| |||||||    
T  24836312 tataacaaaagataaaataaagtcaaattgtttt 24836279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 797
Target Start/End: Original strand, 29940753 - 29940786
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttt 797  Q
    |||||||||||||||||||||||||| |||||||    
T  29940753 tataacaaaagataaaataaagtcaatttgtttt 29940786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 827
Target Start/End: Complemental strand, 32386670 - 32386613
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||||||| ||||| ||||||| || |||| |||| ||||||||||| ||||    
T  32386670 aaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagtt 32386613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 756 - 825
Target Start/End: Original strand, 2996522 - 2996591
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||  |||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  2996522 gctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataag 2996591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 756 - 825
Target Start/End: Original strand, 3175900 - 3175969
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||| |||| ||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||    
T  3175900 gctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataag 3175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 749 - 825
Target Start/End: Original strand, 17884010 - 17884086
Alignment:
Q  749 tgtgtatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||| |||| || ||||||||||||||||||||||| || |||||||| | |||||||| |||||||||||||||    
T  17884010 tgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataag 17884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 764 - 821
Target Start/End: Original strand, 10192241 - 10192298
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttca 10192298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 25885816 - 25885879
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||| |||||||||||||||||| || |||||||  |||||| |||||||||||||||||||||    
T  25885816 tatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagtt 25885879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 821
Target Start/End: Original strand, 18630638 - 18630694
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    ||||||||||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  18630638 ataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttca 18630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 820
Target Start/End: Complemental strand, 42321992 - 42321936
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 820  Q
    ||||||||| |||||||||||||||| ||||||| || ||| |||||||||||||||    
T  42321992 tataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 825
Target Start/End: Original strand, 49085943 - 49086007
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| |||||  | |||| ||  |||||||||||||||||||||||    
T  49085943 ttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataag 49086007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 49219096 - 49219156
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||| ||||||||||||||| || |||| || |||| ||||||||||||||||||    
T  49219096 tataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataa 49219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 52746952 - 52746892
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||| || |||||||| ||||||  ||||| ||||||||||||    
T  52746952 ataacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataag 52746892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 767 - 814
Target Start/End: Complemental strand, 46013410 - 46013363
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 814  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  46013410 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 437545 - 437484
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| |||||||||||||||||| || |||| || || |||||| |||||||||||||||||    
T  437545 tatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataag 437484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 817
Target Start/End: Original strand, 4071839 - 4071892
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtt 817  Q
    |||||||||||||||||||||||||| || |||| || |||| |||||||||||    
T  4071839 tataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 24160608 - 24160547
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| ||||| ||||  | |||| ||||||| |||||||||||||||||||    
T  24160608 tataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataag 24160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 756 - 825
Target Start/End: Original strand, 51630060 - 51630129
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||| |||||||||||||||||| || ||||||| || |||| |||||| | ||||||||||    
T  51630060 gctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataag 51630129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 53626733 - 53626794
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||| ||||  |||||| || |||| |||||| ||||||||||||    
T  53626733 tataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataag 53626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 55870454 - 55870393
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||| ||||||||||||  |||||| |  |||| |||||||||||||||||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataag 55870393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 775 - 827
Target Start/End: Original strand, 927260 - 927312
Alignment:
Q  775 ataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||| ||||||  || ||||||||||||||||||| ||||||    
T  927260 ataaaataaagtcaaattgtttccatataagttataagttgttttcttaagtt 927312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 24929450 - 24929510
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||||||||||||| |  |||||| ||  ||| ||||||||||||||||||    
T  24929450 tataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataa 24929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 46796976 - 46797036
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||| ||||||||||| ||||  |||||  || ||||||||||||||||||||||||    
T  46796976 ataacaaacgataaaataaattcaatatgtttccatataagttataagttgttttcataag 46797036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 867 - 926
Target Start/End: Complemental strand, 18628553 - 18628494
Alignment:
Q  867 ataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||||||||||  ||||| |||| ||||||  |||| |||||||||||||||||||||||    
T  18628553 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataag 18628494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 827
Target Start/End: Complemental strand, 32920505 - 32920450
Alignment:
Q  772 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||||||||||| | ||||| ||  ||| |||||||||||||||||||||    
T  32920505 aagataaaataaagtcaaatcgttttaatagaagctataagttgttttcataagtt 32920450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 767 - 814
Target Start/End: Original strand, 46247178 - 46247225
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 814  Q
    |||||||||||||||||||||||  ||||||||| ||| |||||||||    
T  46247178 aacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 825
Target Start/End: Original strand, 52735081 - 52735140
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||| ||  ||| || ||||||||| ||||||||| ||||    
T  52735081 taacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaag 52735140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 824
Target Start/End: Original strand, 56480306 - 56480365
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||||| |||||||||| || |||||| | | ||||||||||| |||||||||||    
T  56480306 ataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataa 56480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 836 - 926
Target Start/End: Original strand, 4691887 - 4691977
Alignment:
Q  836 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||||||| ||||||||  |||||  |||| |||||||||||| ||||||| ||||||| |  |||| ||||| || || |||||||||||    
T  4691887 aaataagctgaaaacaacatatgggcatgtcataagttgtttccataagttttctcaaatagtctcacaagtgattgtgacagtagataag 4691977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 824
Target Start/End: Complemental strand, 6927596 - 6927546
Alignment:
Q  774 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||||||| || ||||||| ||||||  ||||||||||||||||||    
T  6927596 gataaaataaagttaaattgttttcatgtaaactataagttgttttcataa 6927546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 821
Target Start/End: Complemental strand, 8422950 - 8422895
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    ||||| |||||||||||||||||||  ||||||| || |||| |||||||||||||||    
T  8422950 tataaaaaaagataaaataaagtca--ttgttttcatataagctataagttgttttca 8422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 772 - 818
Target Start/End: Complemental strand, 13949949 - 13949903
Alignment:
Q  772 aagataaaataaagtcaagttgtttttatgtaagttataagttgttt 818  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgttt 13949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 824
Target Start/End: Complemental strand, 27043949 - 27043883
Alignment:
Q  758 tacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||||||||| ||||||||||||| || |||||||  | |||| |||||| |||||| ||||    
T  27043949 tacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataa 27043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 897
Target Start/End: Complemental strand, 37575968 - 37575906
Alignment:
Q  835 gaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaa 897  Q
    ||||| ||| |||||||| |||||  ||||||||||||| |||  ||||||||||||||||||    
T  37575968 gaaatgagctgaaaacaacttatgagtatgttataagttattttcataagttctctcaaacaa 37575906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 8130131 - 8130192
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| |||||||||| || |||| || |||| |||||  ||||||||||||    
T  8130131 tataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 11802491 - 11802552
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||| || || | |  |||| || ||||||||||||||||    
T  11802491 tataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataag 11802552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 827
Target Start/End: Complemental strand, 18628654 - 18628593
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||  |||||| ||||||  ||||||||| ||||||||||  ||||||||||||||    
T  18628654 taacaaaaggaaaaatatagtcaaactgtttttatataagttataaactgttttcataagtt 18628593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 771 - 824
Target Start/End: Original strand, 22471295 - 22471348
Alignment:
Q  771 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||| ||||| |||  |||||| || |||||||||||||||||||||||    
T  22471295 aaagataaattaaaggcaaactgttttcatataagttataagttgttttcataa 22471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 23459585 - 23459646
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||||||||| |||| ||||||||||  | |||| |||||| ||||||||||||    
T  23459585 tatagcaaaagataaaatgaagttaagttgttttcttataagctataagctgttttcataag 23459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 819
Target Start/End: Complemental strand, 25434567 - 25434518
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    ||||||||||||||||||||  |||||| || |||| |||||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttgtttt 25434518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 30207683 - 30207623
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||| |||||||||| ||||  |||||| || |||| |||||||||||||||||||    
T  30207683 tataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataag 30207623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 789
Target Start/End: Complemental strand, 41701562 - 41701529
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaa 789  Q
    |||| |||||||||||||||||||||||||||||    
T  41701562 gctatttatataacaaaagataaaataaagtcaa 41701529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 43372082 - 43372021
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||| ||||||  ||||||||| |||| |||||  || |||||||||    
T  43372082 tataacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataag 43372021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 4e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 761 - 825
Target Start/End: Original strand, 1417218 - 1417282
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||  ||||||||||||||||||    
T  1417218 ttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataag 1417282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 756 - 818
Target Start/End: Original strand, 29274888 - 29274952
Alignment:
Q  756 gctacttatataacaaaagataaaa--taaagtcaagttgtttttatgtaagttataagttgttt 818  Q
    ||||||| |||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||    
T  29274888 gctacttttataacaaaagataaaaaataaagtcaaattgtttctatgtaagttataagttgttt 29274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 767 - 824
Target Start/End: Complemental strand, 30456560 - 30456503
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||| ||||||||||    
T  30456560 aacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataa 30456503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 770 - 824
Target Start/End: Original strand, 31338471 - 31338525
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgtttccataa 31338525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 5006622 - 5006561
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||||||  |||||| || |||| ||||| |||||||||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataag 5006561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 821
Target Start/End: Original strand, 5373171 - 5373239
Alignment:
Q  753 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    ||||||| || |||||||||||||||||||||||| |    ||||||| ||||||||||||||||||||    
T  5373171 tatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgttttca 5373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 777 - 825
Target Start/End: Original strand, 29278629 - 29278677
Alignment:
Q  777 aaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  29278629 aaaataaagtcaaattgtttctatgtaagttataagttgtttccataag 29278677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 862 - 914
Target Start/End: Original strand, 36537973 - 36538025
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatg 914  Q
    |||| |||||||||||| |||||||||||||||||| |||| |||||||||||    
T  36537973 atgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatg 36538025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 764 - 823
Target Start/End: Original strand, 49060497 - 49060556
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    |||||||||| ||||||||||||||| || ||||||| |||| |||||||| ||||||||    
T  49060497 tataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 775 - 821
Target Start/End: Complemental strand, 28340498 - 28340452
Alignment:
Q  775 ataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||    
T  28340498 ataaaataaagtcaaactgttttcatgtaagttataagttgttttca 28340452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 9527203 - 9527142
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||| |||||||||||  |||||| || |||  |||||||||||||||||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataag 9527142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 817
Target Start/End: Complemental strand, 28613647 - 28613594
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtt 817  Q
    ||||||||||||||||| ||||| || |||||||| | ||||||||||||||||    
T  28613647 tataacaaaagataaaacaaagttaaattgtttttgtataagttataagttgtt 28613594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 821
Target Start/End: Complemental strand, 45813293 - 45813236
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    |||| ||||||||||||||||||||| ||||||| || |||  |||||||||||||||    
T  45813293 tataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 862 - 926
Target Start/End: Original strand, 23214920 - 23214984
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||| |||||||||||  |||| ||||||||||||  ||||||||||||||||  ||||||||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataag 23214984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 825
Target Start/End: Original strand, 27548225 - 27548281
Alignment:
Q  769 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||| | ||||||| || |||| |||||| ||||||||||||    
T  27548225 caaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataag 27548281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 812
Target Start/End: Original strand, 35536064 - 35536112
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataag 812  Q
    ||||||| |||||||||||||||||| ||||||| || |||||||||||    
T  35536064 tataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 927
Target Start/End: Complemental strand, 36598388 - 36598296
Alignment:
Q  835 gaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagt 927  Q
    ||||||||| |||||||  |||||   |||| ||||| |||||| ||||| |||||||||||| |||| || || |||||||||||| |||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaattgcttatgtcagtagttaagt 36598296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 837
Target Start/End: Original strand, 44821930 - 44821990
Alignment:
Q  778 aaataaagtcaagttgtttttatgtaagttataagttgttttcataag-ttttctggagaa 837  Q
    |||||||||||| |||||||| | ||||||||||| |||||||||||| | ||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaa 44821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 825
Target Start/End: Original strand, 21453253 - 21453312
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||| |||||||||||||||| | || |||| |||||  ||||||||||||    
T  21453253 taacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataag 21453312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 819
Target Start/End: Original strand, 25511584 - 25511639
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    ||||||||||||| |||||||||||| || ||||||| |||| |||||||| ||||    
T  25511584 tataacaaaagatgaaataaagtcaatttttttttatataagatataagttttttt 25511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Complemental strand, 34083638 - 34083575
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||| |||||||||||||||||| || |||||| | | |||| |||||| ||||||||||||||    
T  34083638 tatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataagtt 34083575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 807
Target Start/End: Complemental strand, 39591580 - 39591537
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagtt 807  Q
    |||||||||||||||||||||||||| ||||||| || ||||||    
T  39591580 tataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 820
Target Start/End: Complemental strand, 45777287 - 45777228
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 820  Q
    ||||||||||||||||||||| |||||||  |||||| || |||  ||||||||||||||    
T  45777287 ttatataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttc 45777228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 836 - 926
Target Start/End: Original strand, 24967100 - 24967190
Alignment:
Q  836 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||||||| |||||||| || ||| |||||||||||||||||| ||||  |||  ||||||  ||||||| |||||||   ||||||||||    
T  24967100 aaataagctgaaaacaacttctggatatgttataagttgtttccataatctcttccaaacagtctcataaatgtttatactagtagataag 24967190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 836 - 926
Target Start/End: Complemental strand, 25670617 - 25670527
Alignment:
Q  836 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||||||| |||||||||||||    |||| |||||||||||  ||||||| |||||||||  |||| ||| | |||||||| ||||||||    
T  25670617 aaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataag 25670527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 819
Target Start/End: Original strand, 946715 - 946764
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    |||||||||||||||||||| |||||||  | | ||||||||||||||||    
T  946715 aaaagataaaataaagtcaaattgttttcgtattagttataagttgtttt 946764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 5010584 - 5010527
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttt 818  Q
    |||| |||||||| |||||||||||| || || ||||||| |||| ||||||||||||    
T  5010584 ttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttgttt 5010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 12110325 - 12110378
Alignment:
Q  772 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||| |||||||  | |||| |||||| ||||||||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataag 12110378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 774 - 827
Target Start/End: Complemental strand, 15309668 - 15309615
Alignment:
Q  774 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||| || |||||||| | || ||| |||||||||||||||||||    
T  15309668 gataaaataaagttaaattgtttttgtatatgttttaagttgttttcataagtt 15309615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 17989136 - 17989075
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||| |||||||||||||||  |||||| || |||  ||||| |||||||||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataag 17989075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 753 - 786
Target Start/End: Original strand, 20526392 - 20526425
Alignment:
Q  753 tatgctacttatataacaaaagataaaataaagt 786  Q
    ||||||||||||||| ||||||||||||||||||    
T  20526392 tatgctacttatatagcaaaagataaaataaagt 20526425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 809
Target Start/End: Original strand, 31341151 - 31341196
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttat 809  Q
    ||||||||||||||||||||||||||  || |||||| ||||||||    
T  31341151 tataacaaaagataaaataaagtcaaactggttttatataagttat 31341196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 824
Target Start/End: Original strand, 38010674 - 38010731
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||| |||| ||| ||||||| || |||| |||||| |||||||||||    
T  38010674 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataa 38010731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 821
Target Start/End: Complemental strand, 48157233 - 48157176
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    ||||| ||||||||||||||||| || ||||||| || |||| ||||| |||||||||    
T  48157233 tataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttca 48157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 761 - 827
Target Start/End: Original strand, 34551074 - 34551140
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||||||||||| || ||||||| ||||||| || ||||||||||||||||||| ||||||    
T  34551074 ttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagtt 34551140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 768 - 825
Target Start/End: Original strand, 34770853 - 34770910
Alignment:
Q  768 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataag 34770910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 42597358 - 42597419
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || ||||||| ||| ||| |||||||||||||||||||    
T  42597358 tataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataag 42597419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 766 - 827
Target Start/End: Complemental strand, 30628013 - 30627952
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||||||| | || |||||| | |||||| |||||||||||||||||||||    
T  30628013 taacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagtt 30627952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 774 - 825
Target Start/End: Complemental strand, 6864562 - 6864511
Alignment:
Q  774 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataag 6864511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 761 - 824
Target Start/End: Original strand, 38561680 - 38561743
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||||||||||||||||||  | ||||||| ||   ||||||||||||||||||    
T  38561680 ttatataacaaaagataaaataaagtcaaactatttttatctatactataagttgttttcataa 38561743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 862 - 923
Target Start/End: Complemental strand, 2488013 - 2487952
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagat 923  Q
    ||||||||||||||||  |||||||||| ||||||  |||| ||||| ||||||||||||||    
T  2488013 atgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagat 2487952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 6509408 - 6509355
Alignment:
Q  772 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||| |||| ||||| |||| |||||| ||||||||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataag 6509355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 821
Target Start/End: Original strand, 29699211 - 29699268
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 821  Q
    ||||||||||||||||||||||||||  |||| | || ||||||||||| ||||||||    
T  29699211 tataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttca 29699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 867 - 936
Target Start/End: Complemental strand, 40280226 - 40280157
Alignment:
Q  867 ataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagtcaatccaaa 936  Q
    |||||||||||| ||||  |||||||||||| ||||||||||  |||| | |||||||| ||||||||||    
T  40280226 ataagttgtttccataaactctctcaaacaatctcataagtgcatatgcctgtagataactcaatccaaa 40280157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 862 - 926
Target Start/End: Original strand, 4560567 - 4560631
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||||||||||| |||| |||||||||  ||||||| |||| ||||| |||||||| ||||||||    
T  4560567 atgttataagttatttccataagttcttccaaacaacctcacaagtgcttatgtcaatagataag 4560631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 809
Target Start/End: Complemental strand, 8066957 - 8066909
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttat 809  Q
    |||||||||||||||||||||||||||||  || |||||| ||||||||    
T  8066957 ttatataacaaaagataaaataaagtcaaactggttttatataagttat 8066909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 771 - 827
Target Start/End: Original strand, 12361156 - 12361212
Alignment:
Q  771 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||| ||||||| ||||||| || |||| |||||| ||||||||||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagtt 12361212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 770 - 825
Target Start/End: Complemental strand, 26473860 - 26473804
Alignment:
Q  770 aaaagataaaataaagtcaagttgttttt-atgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| ||||||||||||| || | |||| |||||||||||||||||    
T  26473860 aaaagataaaataaattcaagttgtttttcatatgagttgtaagttgttttcataag 26473804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 811
Target Start/End: Complemental strand, 8823506 - 8823459
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataa 811  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||||    
T  8823506 tataacaaaagataaaacaaagtcagattgttcttatgtaagttataa 8823459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 800
Target Start/End: Original strand, 20672726 - 20672765
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttat 800  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  20672726 ttatataacaaaagataaaataaagtcaaactgtttttat 20672765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 819
Target Start/End: Original strand, 45071163 - 45071214
Alignment:
Q  768 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    |||||||| ||||||||||||| |||||||||| |||| |||||| ||||||    
T  45071163 acaaaagacaaaataaagtcaaattgtttttatataagctataagctgtttt 45071214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 844 - 926
Target Start/End: Original strand, 1561324 - 1561406
Alignment:
Q  844 ggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    ||||||||| |||||| ||| | |||||||||||   | || |||||||||||| |||| ||||||||||| || ||||||||    
T  1561324 ggaaaacaacttatggatatatcataagttgtttttgtgagctctctcaaacaatctcacaagtgtttatgccattagataag 1561406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 798
Target Start/End: Original strand, 14482159 - 14482193
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgttttt 798  Q
    |||||||||||||||||||||||||| ||||||||    
T  14482159 tataacaaaagataaaataaagtcaaattgttttt 14482193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 770 - 827
Target Start/End: Complemental strand, 35534718 - 35534663
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||||| || |||||||  |||| |||||| ||||||||||||||||    
T  35534718 aaaagataaaataaagttaaattgtttt--tgtatgttatatgttgttttcataagtt 35534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 827
Target Start/End: Complemental strand, 787217 - 787156
Alignment:
Q  766 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||| |||||||||||||||||| ||||| | || |||| |||||  ||||||||||||||    
T  787217 taacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataagtt 787156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 822
Target Start/End: Original strand, 2093237 - 2093294
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 822  Q
    |||| |||||||||||||||||||| | |||||  | |||| ||||||||||||||||    
T  2093237 ataataaaagataaaataaagtcaaatggttttcttttaagctataagttgttttcat 2093294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 784 - 825
Target Start/End: Original strand, 7645955 - 7645996
Alignment:
Q  784 agtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||| ||||||| ||||||| |||||||||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataag 7645996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 834 - 926
Target Start/End: Original strand, 24326070 - 24326160
Alignment:
Q  834 agaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    ||||||||||||||||||| |||||  ||| | ||||  |||||| ||||| |||| ||||||  |||| ||||| ||||| |||||||||||    
T  24326070 agaaataagcggaaaacaacttatg--tatatcataaactgtttccataagctctcccaaacagtctcacaagtgcttatgccagtagataag 24326160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 836 - 913
Target Start/End: Original strand, 31884632 - 31884708
Alignment:
Q  836 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtttat 913  Q
    |||||||| ||||||| || ||| | ||||||||||||||||||||||| | |||||| | | |||||||||| ||||    
T  31884632 aaataagctgaaaacagtt-atgatcatgttataagttgtttcgataagatatctcaacctatctcataagtgcttat 31884708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 774 - 822
Target Start/End: Complemental strand, 35928799 - 35928750
Alignment:
Q  774 gataaaataaagtcaagttgttttta-tgtaagttataagttgttttcat 822  Q
    ||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  35928799 gataacataaagtcaatttgttttttgtgtaagttataagttgttttcat 35928750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 763 - 825
Target Start/End: Original strand, 30371104 - 30371166
Alignment:
Q  763 atataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||| |||| ||||||| || |||| |||||||||||||||||||    
T  30371104 atataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 49517027 - 49517088
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||| ||||||| || |||| |||||| ||||||||||||    
T  49517027 tataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataag 49517088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 824
Target Start/End: Complemental strand, 40304175 - 40304107
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||| |||||||||||||||||||||||| |||  ||||||| || ||||||||||| |||||||||||    
T  40304175 gctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcataa 40304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 767 - 825
Target Start/End: Complemental strand, 27738290 - 27738232
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| ||||||| || |||| ||||| |||||||||||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataag 27738232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 756 - 825
Target Start/End: Complemental strand, 1393140 - 1393071
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| |||||||||||||| ||||||||||| ||  |||||| |||||||||||||||  ||||||||||    
T  1393140 gctatttatataacaaaagttaaaataaagtaaatctgttttcatgtaagttataagtcattttcataag 1393071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 4200186 - 4200247
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||  |||||||| ||||    
T  4200186 tataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaag 4200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 28467420 - 28467359
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||| || |||| || |||| || ||||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataag 28467359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Complemental strand, 34179985 - 34179925
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||||||||||||||| ||||||| || |||| |||||  |||||||||||    
T  34179985 tataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataa 34179925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 764 - 827
Target Start/End: Complemental strand, 6933074 - 6933011
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||| ||||||||||||||| ||||||| ||  ||||||| |||| ||||||||||||    
T  6933074 tataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagtt 6933011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 765 - 824
Target Start/End: Complemental strand, 7218186 - 7218127
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||| ||||| |||||||||||||| ||||||| || |||| ||||||||||||||||||    
T  7218186 ataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataa 7218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 765 - 820
Target Start/End: Complemental strand, 36151617 - 36151562
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 820  Q
    ||||||||||||||||||||||||| |||||||  | |||||||||| ||||||||    
T  36151617 ataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttc 36151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 776 - 825
Target Start/End: Complemental strand, 25006135 - 25006086
Alignment:
Q  776 taaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataag 25006086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 797
Target Start/End: Original strand, 50319249 - 50319282
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttt 797  Q
    ||||||||||||||||||||||||||||||||||    
T  50319249 tataacaaaagataaaataaagtcaagttgtttt 50319282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 824
Target Start/End: Complemental strand, 7274052 - 7273992
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||||||||| |||||||||||| ||||||| ||  |||||||||| ||||| |||||    
T  7274052 tataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataa 7273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 816
Target Start/End: Original strand, 15360851 - 15360903
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgt 816  Q
    ||||||||||||||||||||||||||  |||||| || |||| ||||||||||    
T  15360851 tataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 823
Target Start/End: Complemental strand, 17423052 - 17422992
Alignment:
Q  764 tataacaaaa-gataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    |||||||||| ||||||||||||||||| || ||| || |||| |||||||||||||||||    
T  17423052 tataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttcata 17422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 824
Target Start/End: Complemental strand, 46980242 - 46980182
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||| ||||||||||||||||| |||  |||||| || |||||||||| ||||||||||||    
T  46980242 tatatcaaaagataaaataaagacaaactgttttcatataagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 47002986 - 47002926
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||| ||||||||||||||||| || ||||||||||  |||||| || |||||||||||||    
T  47002986 ataataaaagataaaataaagttaaattgtttttatacaagttagaaattgttttcataag 47002926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 825
Target Start/End: Original strand, 4548684 - 4548739
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||  |||||||||  |||| ||||| ||||||||||||    
T  4548684 aaaagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataag 4548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 825
Target Start/End: Complemental strand, 5592792 - 5592737
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||| | ||||| | || |||| |||||||||||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttgttttcataag 5592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 799
Target Start/End: Original strand, 6265043 - 6265086
Alignment:
Q  756 gctacttatataacaaaagataaaataaagtcaagttgttttta 799  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||    
T  6265043 gctacttctataacaaaaaataaaataaagtcaaattgttttta 6265086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 823
Target Start/End: Complemental strand, 28689567 - 28689508
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    |||| ||||||||||||||||  ||||| ||||| || |||| |||||||||||||||||    
T  28689567 tatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcata 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 36070207 - 36070270
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||||||||||| || |||| ||    |||| |||||||||||||||||||||    
T  36070207 tataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataagtt 36070270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Original strand, 48064266 - 48064329
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||| |||||||||||||||||| ||  | ||||| | |||||||||||||| |||||||||||    
T  48064266 tatagcaaaagataaaataaagtaaaactatttttgtataagttataagttgatttcataagtt 48064329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 823
Target Start/End: Original strand, 49557098 - 49557157
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 823  Q
    ||||||||||||||||||||||| || | || || || |||| |||||||||||||||||    
T  49557098 tataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcata 49557157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 767 - 825
Target Start/End: Original strand, 17269210 - 17269268
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||  ||||||||||||| ||||||| || ||||  ||||||||||||||||||    
T  17269210 aacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataag 17269268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 820
Target Start/End: Original strand, 3062960 - 3063013
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 820  Q
    ||||||||||||||||| ||||| |||||||||| |||  |||||| |||||||    
T  3062960 aacaaaagataaaataatgtcaaattgtttttatataaactataagatgttttc 3063013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 768 - 825
Target Start/End: Complemental strand, 5422029 - 5421972
Alignment:
Q  768 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| |||||| |||||||  | |||| ||||||||||||| |||||    
T  5422029 acaaaagataaaatatagtcaaattgttttcttataagctataagttgttttgataag 5421972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 768 - 825
Target Start/End: Complemental strand, 10581186 - 10581129
Alignment:
Q  768 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||| ||||||||||||||||  | |||| || |||| |||||||||||||||||||    
T  10581186 acaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataag 10581129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 797
Target Start/End: Complemental strand, 14737818 - 14737785
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttt 797  Q
    |||||||||||||||||||||||||| |||||||    
T  14737818 tataacaaaagataaaataaagtcaaattgtttt 14737785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 862 - 927
Target Start/End: Complemental strand, 23373318 - 23373253
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagt 927  Q
    |||| |||||||||||| ||||| |||| ||||||| |||| ||||| |||| |||||||| ||||    
T  23373318 atgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttatatcagtagacaagt 23373253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 25479538 - 25479599
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||| ||||||||||||| ||||| |||| || || || | |||||||||||||||||||    
T  25479538 tataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataag 25479599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 33186062 - 33186009
Alignment:
Q  772 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||| ||| | ||||||||||  ||||||||||||||||| |||||    
T  33186062 aagataaaataaggtcgaattgtttttatacaagttataagttgtttttataag 33186009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 834
Target Start/End: Original strand, 43420216 - 43420285
Alignment:
Q  765 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttttctgga 834  Q
    ||||| |||||||||||||||||||  | ||||||| ||||||  ||||| |||||||||| | ||||||    
T  43420216 ataacgaaagataaaataaagtcaaactttttttatataagttgcaagttattttcataagctatctgga 43420285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 44940300 - 44940358
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||| ||||||||||||||||||||   |||||| |  |||||||||||||||||||||||    
T  44940300 tatagcaaaagataaaataaagtcac--tgttttcaaataagttataagttgttttcataa 44940358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 805
Target Start/End: Complemental strand, 46499967 - 46499926
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaag 805  Q
    ||||| |||||||||||||||||||| |||||||||| ||||    
T  46499967 tataagaaaagataaaataaagtcaaattgtttttatttaag 46499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 761 - 827
Target Start/End: Original strand, 40185 - 40251
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||  |||||||||| ||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  40185 ttatatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagttgttttcataagtt 40251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000006; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 12407774 - 12407713
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||||||  ||||||||||    
T  12407774 tataacaaaagataaaataaagtaaatctgttttcatgtaagttataagtcattttcataag 12407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 18704148 - 18704088
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||| |||||||||| | ||||||| |||| |||||||||||||||||||    
T  18704148 tataacaaaagataaa-taaagtcaagctatttttatataagctataagttgttttcataag 18704088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 4855655 - 4855715
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||| |||||||||||| || ||||| | || |||||||||||||||||||||||    
T  4855655 tataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataa 4855715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 862 - 926
Target Start/End: Complemental strand, 11095500 - 11095436
Alignment:
Q  862 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataag 926  Q
    |||| ||||| |||||| | ||||||||||||||||  ||| |||||||||||||||||||||||    
T  11095500 atgtcataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataag 11095436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 864 - 927
Target Start/End: Complemental strand, 14599375 - 14599312
Alignment:
Q  864 gttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagt 927  Q
    ||||||||||||||||||||| |||||||||||| || | |||||||||||  |||| ||||||    
T  14599375 gttataagttgtttcgataagctctctcaaacaatcttacaagtgtttatgctagtaaataagt 14599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 764 - 829
Target Start/End: Original strand, 10303758 - 10303821
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtttt 829  Q
    |||||||||||||||||||||||||| ||||||| || |||    |||||||||||||||||||||    
T  10303758 tataacaaaagataaaataaagtcaaattgttttcatttaa--cctaagttgttttcataagtttt 10303821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 767 - 825
Target Start/End: Original strand, 32172613 - 32172671
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||| ||||||||||||||  || |||| |||||| ||||||||||||    
T  32172613 aacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataag 32172671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 827
Target Start/End: Original strand, 36539708 - 36539766
Alignment:
Q  769 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||||||||||||||  |||||| || |||| ||||||||||||| |||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagtt 36539766  T

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Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 771 - 825
Target Start/End: Complemental strand, 41277456 - 41277402
Alignment:
Q  771 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataag 41277402  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 14295463 - 14295524
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||||||  |||||| || |||| |||||| ||||||| ||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaag 14295524  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 825
Target Start/End: Complemental strand, 39823237 - 39823173
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||||||||||||||||||||  |  ||| || |||| || ||||||||||||||||    
T  39823237 ttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataag 39823173  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 825
Target Start/End: Complemental strand, 10272538 - 10272483
Alignment:
Q  770 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||||| ||||||| |||||||  | |||| |||||||||||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataag 10272483  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 819
Target Start/End: Complemental strand, 28586879 - 28586824
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 819  Q
    ||||||||||||||||||||||||||  |||||| || ||| ||||||| ||||||    
T  28586879 tataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 825
Target Start/End: Original strand, 34205206 - 34205257
Alignment:
Q  774 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||| ||||||||| || ||||||| |||| |||||||||||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttgttttcataag 34205257  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Complemental strand, 42181205 - 42181142
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    ||||||||||||||||| |||||||| | ||||| || |||| |||||||||||| || |||||    
T  42181205 tataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaagtt 42181142  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 827
Target Start/End: Complemental strand, 9202856 - 9202798
Alignment:
Q  769 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||||||||||||| || ||||||| || ||||  ||||| ||||||||||||||    
T  9202856 caaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagtt 9202798  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 825
Target Start/End: Complemental strand, 18543306 - 18543248
Alignment:
Q  768 acaaaagataaaataaagtcaag-ttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||| || ||||||||||||  |||||||||| |||| |||||||||||||||||||    
T  18543306 acaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcataag 18543248  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 767 - 825
Target Start/End: Original strand, 40159779 - 40159837
Alignment:
Q  767 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    |||||||||| || ||||||||| ||||||| || |||||||||| | |||||||||||    
T  40159779 aacaaaagattaagtaaagtcaaattgttttcatataagttataaatcgttttcataag 40159837  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 41957562 - 41957503
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||  |||| |||| || ||||||| |||||||||||||| ||||||||||||    
T  41957562 tataacaaaaga--aaatgaagttaaattgttttcatgtaagttataagctgttttcataag 41957503  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 899 - 944
Target Start/End: Complemental strand, 13605341 - 13605296
Alignment:
Q  899 ctcataagtgtttatgtcagtagataagtcaatccaaagagaccct 944  Q
    |||| ||||| |||||||| |||||||||||||||||| |||||||    
T  13605341 ctcacaagtggttatgtcactagataagtcaatccaaacagaccct 13605296  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 805
Target Start/End: Complemental strand, 32969230 - 32969189
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaag 805  Q
    |||||||||||||||||||||||||| || ||||||| ||||    
T  32969230 tataacaaaagataaaataaagtcaaattatttttatataag 32969189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 836
Target Start/End: Complemental strand, 37526312 - 37526239
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt-ttctggaga 836  Q
    ||||| |||||||||||| || ||||   ||||| || |||| ||||||||||||||||||||| |||||||||    
T  37526312 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggaga 37526239  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 836
Target Start/End: Complemental strand, 37588473 - 37588400
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt-ttctggaga 836  Q
    ||||| |||||||||||| || ||||   ||||| || |||| ||||||||||||||||||||| |||||||||    
T  37588473 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggaga 37588400  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 27533 - 27593
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    ||||||| |||||||||||||||||| ||||||| || |||  ||||||||||||||||||    
T  27533 tataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataa 27593  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 827
Target Start/End: Original strand, 5640 - 5706
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 827  Q
    |||||||  |||||||||| ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  5640 ttatatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagtcgttttcataagtt 5706  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 867 - 922
Target Start/End: Complemental strand, 4223 - 4168
Alignment:
Q  867 ataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtaga 922  Q
    |||||||||||| ||||  |||| |||||||||||| ||||| |||||||||||||    
T  4223 ataagttgtttccataaactctcacaaacaagctcacaagtgcttatgtcagtaga 4168  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 824
Target Start/End: Complemental strand, 58209 - 58146
Alignment:
Q  761 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 824  Q
    |||||||||||||||||| |||||||||| | || || || || | ||||||||||||||||||    
T  58209 ttatataacaaaagataacataaagtcaaatagtattaatatacgctataagttgttttcataa 58146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.0000004; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 1837 - 1776
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || || |||| || || | ||||||||| |||||||||    
T  1837 tataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataag 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 825
Target Start/End: Complemental strand, 3927 - 3866
Alignment:
Q  764 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 825  Q
    ||||||||||||||||||||||| || || |||| || || | ||||||||| |||||||||    
T  3927 tataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataag 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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