View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5388_high_5 (Length: 336)

Name: NF5388_high_5
Description: NF5388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5388_high_5
NF5388_high_5
[»] chr2 (11 HSPs)
chr2 (168-329)||(28220359-28220523)
chr2 (35-159)||(28218023-28218147)
chr2 (252-329)||(28215701-28215778)
chr2 (249-317)||(32309286-32309354)
chr2 (249-317)||(32565481-32565549)
chr2 (249-317)||(32799712-32799780)
chr2 (249-317)||(32806666-32806734)
chr2 (249-317)||(32815103-32815171)
chr2 (51-154)||(8178731-8178834)
chr2 (88-154)||(45328894-45328960)
chr2 (87-146)||(16291553-16291612)
[»] chr4 (3 HSPs)
chr4 (30-159)||(48624748-48624877)
chr4 (108-154)||(27452402-27452448)
chr4 (104-137)||(16001023-16001056)
[»] chr5 (4 HSPs)
chr5 (30-154)||(25924-26048)
chr5 (30-154)||(1289747-1289873)
chr5 (51-154)||(7090193-7090296)
chr5 (55-153)||(21913203-21913301)
[»] chr3 (4 HSPs)
chr3 (30-154)||(51449923-51450047)
chr3 (30-154)||(52137129-52137253)
chr3 (30-122)||(3367764-3367855)
chr3 (87-158)||(9257038-9257109)
[»] chr8 (3 HSPs)
chr8 (88-154)||(15217515-15217581)
chr8 (55-148)||(21239700-21239793)
chr8 (84-151)||(13587653-13587721)
[»] chr6 (3 HSPs)
chr6 (249-317)||(301432-301500)
chr6 (30-154)||(6080387-6080511)
chr6 (88-154)||(20429914-20429980)
[»] chr1 (1 HSPs)
chr1 (51-154)||(49349652-49349755)
[»] scaffold0001 (1 HSPs)
scaffold0001 (89-154)||(440839-440904)


Alignment Details
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 168 - 329
Target Start/End: Original strand, 28220359 - 28220523
Alignment:
Q  168 gttaccattgtccaagcttctctattcaacttcgggaagattgatttttggctccgtgaagttgaccgtgaaatcaccatccaatgaaagaa----tcaa 263  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    |||     
T  28220359 gttaccatcgtccaagcttctctattcaacttcgggaagattgatttt-ggctccgtgaagttgaccgtgaaatcaccatccaatgaaagaaagaatcag 28220457  T
Q  264 agatggttccaatcttcaatataatttctataaggtttcctgccctcaagctgagaatattcttcg 329  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  28220458 agatggttccaatcttcaatataatttctataaggtttcttgccctcaagctgagaatattgttcg 28220523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 28218023 - 28218147
Alignment:
Q  35 aatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaaaacac 134  Q
    |||||||| || ||| |||||||||||||  |||| |||||||||| ||||||||||| ||||  ||| ||||||||| || |||||||||||||||||     
T  28218023 aatcttctcgtttgatttcctaataagaaagaaatctatctgagaataagtcaccccattcttgcatgtgataagatgttcatctcttttcctaaaacat 28218122  T
Q  135 gtattagttatagtaagatcgaaac 159  Q
    |||||| |||||||| |||| ||||    
T  28218123 gtattaattatagtaggatcaaaac 28218147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 329
Target Start/End: Complemental strand, 28215778 - 28215701
Alignment:
Q  252 tgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctgagaatattcttcg 329  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| ||||    
T  28215778 tgaaagtatcagagatggttccaatcttcgatataatttctataaggattcttgccctgaagctgagaatattgttcg 28215701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 32309286 - 32309354
Alignment:
Q  249 caatgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctga 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  32309286 caatcaaagaatcagagatggttccaatcttcaatataatttctatagggattcttgccctcaagctga 32309354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 32565549 - 32565481
Alignment:
Q  249 caatgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctga 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  32565549 caatcaaagaatcagagatggttccaatcttcaatataatttctatagggattcttgccctcaagctga 32565481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 32799780 - 32799712
Alignment:
Q  249 caatgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctga 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  32799780 caatcaaagaatcagagatggttccaatcttcaatataatttctatagggattcttgccctcaagctga 32799712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 32806734 - 32806666
Alignment:
Q  249 caatgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctga 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  32806734 caatcaaagaatcagagatggttccaatcttcaatataatttctatagggattcttgccctcaagctga 32806666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 32815171 - 32815103
Alignment:
Q  249 caatgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctga 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  32815171 caatcaaagaatcagagatggttccaatcttcaatataatttctatagggattcttgccctcaagctga 32815103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 8178834 - 8178731
Alignment:
Q  51 ttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaa 150  Q
    |||||||||||||  |||| |||||||||| | |  ||||||||||| || | ||||| |||||||||| ||||||| ||||| ||||||| ||||||||    
T  8178834 ttcctaataagaaagaaatctatctgagaacatgagaccccactcttgtaagtgataaaatgctcctctattttcctgaaacaagtattagctatagtaa 8178735  T
Q  151 gatc 154  Q
    ||||    
T  8178734 gatc 8178731  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 45328894 - 45328960
Alignment:
Q  88 ccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaagatc 154  Q
    |||||||||| || | ||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  45328894 ccccactcttgtaagtgatgagatgctcctctcttttcctaaaacacgtattagcgatagtaagatc 45328960  T

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Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 16291612 - 16291553
Alignment:
Q  87 accccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttata 146  Q
    ||||||||||| || | |||||||||||||||||||||||| ||||| ||||||| ||||    
T  16291612 accccactcttgtaagtgataagatgctcctctcttttcctgaaacaagtattagctata 16291553  T

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Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 48624748 - 48624877
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaa 129  Q
    |||| ||||||| |||  || |||||||||||||  |||| |||||||||| | |  ||||||||||| || | ||| |||||||||||||||||||| |    
T  48624748 aaacaaatcttcctgtcagatttcctaataagaaagaaatctatctgagaacatgagaccccactcttgtaagtgattagatgctcctctcttttcctga 48624847  T
Q  130 aacacgtattagttatagtaagatcgaaac 159  Q
    |||| ||||||| |||||||||||| ||||    
T  48624848 aacaagtattagctatagtaagatcaaaac 48624877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 27452402 - 27452448
Alignment:
Q  108 agatgctcctctcttttcctaaaacacgtattagttatagtaagatc 154  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  27452402 agatgctcatctcttttcctaaaacatgtattagctatagtaagatc 27452448  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 137
Target Start/End: Complemental strand, 16001056 - 16001023
Alignment:
Q  104 gataagatgctcctctcttttcctaaaacacgta 137  Q
    ||||||||||||||||||||||||||||||||||    
T  16001056 gataagatgctcctctcttttcctaaaacacgta 16001023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 26048 - 25924
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaa 129  Q
    |||| ||||||  ||||||| ||||||||||||| ||||| |||||||||| |  | | | ||||||| || | |||||||||||||||||| |||| ||    
T  26048 aaacaaatctttatgtatgaattcctaataagaaaaaaatctatctgagaacatattatcgcactcttgtaagtgataagatgctcctctctgttccaaa 25949  T
Q  130 aacacgtattagttatagtaagatc 154  Q
    |||||||||||| |||| |||||||    
T  25948 aacacgtattagctataataagatc 25924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 1289747 - 1289873
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaa-gaaa-atatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcct 127  Q
    |||| ||||||| |||  || ||||||||||||| |||| ||||||||||||| | |  ||| ||||||| || | ||||||||||||||||||||||||    
T  1289747 aaacaaatcttcctgtcggatttcctaataagaaagaaatatatatctgagaacatgagacctcactcttgtaagtgataagatgctcctctcttttcct 1289846  T
Q  128 aaaacacgtattagttatagtaagatc 154  Q
     ||||| ||||||| ||||||||||||    
T  1289847 gaaacaagtattagctatagtaagatc 1289873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 7090296 - 7090193
Alignment:
Q  51 ttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaa 150  Q
    |||||||||||||  ||||  ||||||||| | || | ||| ||||| |||| ||||||||||||| |||||||| || |||||||||||| || |||||    
T  7090296 ttcctaataagaaagaaattcatctgagaacatgttaacccgctcttgtatgtgataagatgctccactcttttcatagaacacgtattagctacagtaa 7090197  T
Q  151 gatc 154  Q
    ||||    
T  7090196 gatc 7090193  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 21913301 - 21913203
Alignment:
Q  55 taataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaagat 153  Q
    |||||||||  |||| |||||| ||| | | ||||||||| ||||||  ||||||||| ||| |||||| | |||| ||| |||||| |||||||||||    
T  21913301 taataagaaagaaatttatctgtgaacatgccaccccactattatatatgataagatgttccactctttacttaaagcacttattagctatagtaagat 21913203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 51449923 - 51450047
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaa 129  Q
    |||| ||||||| |||  || |||||||||||||  |||| |||||||||| | |  ||||||||||| || | |||||||||||||||| ||||||| |    
T  51449923 aaacaaatcttcctgtcggatttcctaataagaaagaaatctatctgagaacatgagaccccactcttgtaagtgataagatgctcctctattttcctga 51450022  T
Q  130 aacacgtattagttatagtaagatc 154  Q
    |||| ||||||| ||||||||||||    
T  51450023 aacaagtattagctatagtaagatc 51450047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 52137253 - 52137129
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaa 129  Q
    |||| ||||||| |||  || |||||||||||||  |||| || ||||||| | |  |||||||||||  | | |||| ||||||||||||||||||| |    
T  52137253 aaacaaatcttcctgtcggatttcctaataagaaagaaatctacctgagaacatgagaccccactcttgaaagtgataggatgctcctctcttttcctga 52137154  T
Q  130 aacacgtattagttatagtaagatc 154  Q
    |||| ||||||| ||||||||||||    
T  52137153 aacaagtattagctatagtaagatc 52137129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 3367855 - 3367764
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctctt 122  Q
    |||| ||||||| |||  |||||| |||||||||  |||| ||||| |||| | |||||| ||||||| ||||||||||||||||||||||||    
T  3367855 aaacaaatcttcatgtcagacttcttaataagaaagaaatctatct-agaacatgtcaccgcactcttgtatgcgataagatgctcctctctt 3367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 9257109 - 9257038
Alignment:
Q  87 accccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaagatcgaaa 158  Q
    ||||||||||| || | ||||| |||||| |||||||| |||||||| ||||||| ||  ||||||||||||    
T  9257109 accccactcttgtaagtgataaaatgctcatctctttttctaaaacatgtattagctacggtaagatcgaaa 9257038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 15217515 - 15217581
Alignment:
Q  88 ccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaagatc 154  Q
    |||||||||| || | ||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  15217515 ccccactcttgtaagtgatgagatgctcctctcttttcctaaaacacgtattagctatagtaagatc 15217581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 21239700 - 21239793
Alignment:
Q  55 taataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagt 148  Q
    |||||| || || ||||||||||||| | ||||||| | |||| || | |||||||||||| |||||||| ||||||||| |||||| ||||||    
T  21239700 taataaaaaaaatatatatctgagaacatgtcacccaattcttgtaagtgataagatgctcatctctttttctaaaacacatattagctatagt 21239793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 13587721 - 13587653
Alignment:
Q  84 gtcaccccactcttatatgcgataagatgctcctctcttttcct-aaaacacgtattagttatagtaag 151  Q
    |||||||| ||||| || | ||||||||||||||||||||| || |||| | ||||||| |||||||||    
T  13587721 gtcacccctctcttgtaagtgataagatgctcctctctttttctaaaaaaatgtattagctatagtaag 13587653  T

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Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 301432 - 301500
Alignment:
Q  249 caatgaaagaatcaaagatggttccaatcttcaatataatttctataaggtttcctgccctcaagctga 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || |||  |||||||||||||    
T  301432 caatcaaagaatcagagatggttccaatcttcaatataatttctatagggattctagccctcaagctga 301500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 6080511 - 6080387
Alignment:
Q  30 aaaccaatcttcttgtatgacttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaa 129  Q
    |||| ||||||| |||  || |||||||||||||  |||| ||| |||||| | |  ||| ||||||| || | |||||||||||||||||||||||  |    
T  6080511 aaacaaatcttcctgtcggatttcctaataagaaataaatctatttgagaacatgagacctcactcttgtaagtgataagatgctcctctcttttcccga 6080412  T
Q  130 aacacgtattagttatagtaagatc 154  Q
    |||| ||||||| ||||||||||||    
T  6080411 aacaagtattagctatagtaagatc 6080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 20429914 - 20429980
Alignment:
Q  88 ccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaagatc 154  Q
    ||||||||||||| | ||| ||||| ||||||||||||||||| |||||||||  ||||||||||||    
T  20429914 ccccactcttataagtgatgagatggtcctctcttttcctaaagcacgtattaactatagtaagatc 20429980  T

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Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 49349652 - 49349755
Alignment:
Q  51 ttcctaataagaagaaaatatatctgagaagaagtcaccccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaa 150  Q
    |||||||||||||  |||| |||||||||| | |  ||||||||||| || | |||||||||||| ||| ||||||| ||||| ||||||| ||||||||    
T  49349652 ttcctaataagaaagaaatctatctgagaacatgagaccccactcttgtaagtgataagatgctcatctattttcctgaaacaagtattagctatagtaa 49349751  T
Q  151 gatc 154  Q
    ||||    
T  49349752 gatc 49349755  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 440904 - 440839
Alignment:
Q  89 cccactcttatatgcgataagatgctcctctcttttcctaaaacacgtattagttatagtaagatc 154  Q
    ||||||||| || | ||| |||||||||||||||||||||||| ||||||||   |||||||||||    
T  440904 cccactcttgtaagtgatgagatgctcctctcttttcctaaaatacgtattaacgatagtaagatc 440839  T

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