View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5392_high_4 (Length: 283)

Name: NF5392_high_4
Description: NF5392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5392_high_4
NF5392_high_4
[»] chr8 (32 HSPs)
chr8 (33-98)||(21649058-21649123)
chr8 (33-106)||(41776286-41776358)
chr8 (33-106)||(37471754-37471826)
chr8 (37-97)||(22203107-22203167)
chr8 (33-106)||(22836027-22836099)
chr8 (33-106)||(33692832-33692904)
chr8 (33-106)||(1646367-1646439)
chr8 (33-106)||(23709087-23709159)
chr8 (33-95)||(18550100-18550162)
chr8 (33-95)||(25430767-25430829)
chr8 (33-98)||(23265241-23265306)
chr8 (33-106)||(43590805-43590877)
chr8 (33-97)||(32778002-32778065)
chr8 (36-95)||(42651041-42651100)
chr8 (36-106)||(1422593-1422662)
chr8 (33-90)||(10591761-10591818)
chr8 (33-106)||(34247885-34247957)
chr8 (34-95)||(34578226-34578287)
chr8 (39-95)||(34838164-34838220)
chr8 (33-76)||(40570648-40570691)
chr8 (48-106)||(6243145-6243202)
chr8 (33-95)||(13924130-13924192)
chr8 (33-95)||(14233532-14233594)
chr8 (33-87)||(28713222-28713276)
chr8 (33-87)||(28720569-28720623)
chr8 (33-87)||(28728211-28728265)
chr8 (36-95)||(3394593-3394652)
chr8 (33-88)||(4148543-4148598)
chr8 (34-97)||(39386810-39386873)
chr8 (33-95)||(8233384-8233446)
chr8 (34-95)||(34883285-34883346)
chr8 (39-87)||(27300475-27300523)
[»] chr5 (29 HSPs)
chr5 (32-97)||(6458886-6458951)
chr5 (33-98)||(21771361-21771426)
chr5 (30-95)||(35616686-35616751)
chr5 (33-106)||(42364540-42364612)
chr5 (37-97)||(33893705-33893765)
chr5 (28-106)||(3031945-3032023)
chr5 (33-87)||(17574112-17574166)
chr5 (36-98)||(22864270-22864332)
chr5 (36-106)||(35595877-35595946)
chr5 (33-95)||(37821029-37821091)
chr5 (34-95)||(12612906-12612967)
chr5 (37-98)||(14522856-14522917)
chr5 (41-98)||(18729173-18729230)
chr5 (33-97)||(3849617-3849681)
chr5 (33-95)||(39032492-39032554)
chr5 (40-95)||(38919967-38920022)
chr5 (33-95)||(12203266-12203328)
chr5 (33-95)||(14126535-14126597)
chr5 (34-95)||(8442280-8442341)
chr5 (33-106)||(9940165-9940237)
chr5 (37-97)||(12890994-12891048)
chr5 (33-98)||(25585344-25585409)
chr5 (33-98)||(35924388-35924453)
chr5 (36-92)||(11878551-11878606)
chr5 (39-98)||(36899375-36899434)
chr5 (36-95)||(43152951-43153010)
chr5 (33-87)||(30103341-30103395)
chr5 (33-95)||(34693104-34693166)
chr5 (32-97)||(266904-266969)
[»] chr3 (30 HSPs)
chr3 (33-106)||(48117447-48117519)
chr3 (33-97)||(29846779-29846843)
chr3 (33-106)||(50745660-50745732)
chr3 (33-97)||(29057767-29057831)
chr3 (33-97)||(40821748-40821812)
chr3 (32-106)||(9158923-9158996)
chr3 (33-97)||(35368730-35368794)
chr3 (33-97)||(44827072-44827136)
chr3 (40-106)||(43894880-43894945)
chr3 (33-95)||(9027734-9027796)
chr3 (33-95)||(29555729-29555791)
chr3 (33-95)||(43149231-43149293)
chr3 (33-98)||(14838933-14838998)
chr3 (33-98)||(42888661-42888725)
chr3 (33-95)||(33972004-33972066)
chr3 (33-98)||(44689921-44689986)
chr3 (33-92)||(43220030-43220089)
chr3 (33-87)||(27276863-27276917)
chr3 (216-261)||(27802045-27802093)
chr3 (33-83)||(38296550-38296600)
chr3 (33-98)||(30664619-30664684)
chr3 (41-106)||(51385336-51385400)
chr3 (33-97)||(26280676-26280740)
chr3 (39-95)||(32152014-32152070)
chr3 (33-96)||(31763927-31763990)
chr3 (33-95)||(7351526-7351588)
chr3 (1-31)||(27802012-27802042)
chr3 (33-78)||(11404842-11404887)
chr3 (33-81)||(37585566-37585612)
chr3 (34-79)||(55264954-55264999)
[»] chr2 (39 HSPs)
chr2 (33-97)||(45202020-45202084)
chr2 (33-106)||(11828708-11828780)
chr2 (33-106)||(35007989-35008061)
chr2 (33-106)||(35705805-35705877)
chr2 (28-93)||(38778014-38778079)
chr2 (33-106)||(43205204-43205276)
chr2 (33-97)||(40115634-40115698)
chr2 (32-106)||(41156890-41156963)
chr2 (33-106)||(22296017-22296089)
chr2 (33-106)||(27529638-27529710)
chr2 (33-106)||(27538820-27538892)
chr2 (33-106)||(35203637-35203709)
chr2 (33-98)||(35798327-35798392)
chr2 (43-106)||(17999855-17999917)
chr2 (32-95)||(23141475-23141538)
chr2 (32-95)||(23553265-23553328)
chr2 (32-95)||(30340115-30340178)
chr2 (33-95)||(5852579-5852641)
chr2 (33-95)||(8757665-8757727)
chr2 (33-95)||(16463413-16463475)
chr2 (33-87)||(28679256-28679310)
chr2 (33-95)||(35518396-35518458)
chr2 (33-98)||(11152587-11152652)
chr2 (33-106)||(13881206-13881278)
chr2 (33-106)||(14021331-14021403)
chr2 (42-98)||(44897744-44897800)
chr2 (33-88)||(12257029-12257084)
chr2 (33-88)||(26387719-26387774)
chr2 (33-95)||(38598238-38598299)
chr2 (33-98)||(43515009-43515074)
chr2 (39-98)||(18749257-18749316)
chr2 (33-95)||(34141564-34141626)
chr2 (36-97)||(6885371-6885432)
chr2 (33-95)||(1096231-1096293)
chr2 (33-87)||(37064187-37064241)
chr2 (33-95)||(38027503-38027565)
chr2 (34-95)||(9377647-9377708)
chr2 (31-92)||(38533084-38533145)
chr2 (34-98)||(43076415-43076478)
[»] chr6 (14 HSPs)
chr6 (33-106)||(6997438-6997510)
chr6 (33-95)||(9395225-9395287)
chr6 (33-106)||(32135325-32135397)
chr6 (33-97)||(19713113-19713177)
chr6 (33-106)||(10557520-10557592)
chr6 (33-98)||(16121270-16121335)
chr6 (28-98)||(34792124-34792194)
chr6 (33-106)||(2165188-2165260)
chr6 (33-106)||(2176821-2176893)
chr6 (33-106)||(16865640-16865712)
chr6 (37-95)||(608553-608611)
chr6 (33-95)||(17442943-17443005)
chr6 (33-95)||(22422271-22422333)
chr6 (39-95)||(7303999-7304055)
[»] chr4 (25 HSPs)
chr4 (37-106)||(4878078-4878146)
chr4 (33-98)||(22893986-22894051)
chr4 (33-98)||(22945654-22945719)
chr4 (33-98)||(1868781-1868846)
chr4 (33-98)||(8487753-8487818)
chr4 (33-98)||(24310409-24310474)
chr4 (33-98)||(31413674-31413739)
chr4 (33-97)||(4577683-4577746)
chr4 (33-106)||(53781725-53781797)
chr4 (28-98)||(45678381-45678451)
chr4 (39-95)||(21766668-21766724)
chr4 (37-106)||(51107334-51107402)
chr4 (34-106)||(48760397-48760467)
chr4 (33-88)||(32294640-32294695)
chr4 (33-95)||(18944406-18944468)
chr4 (36-98)||(33777012-33777074)
chr4 (33-95)||(36110255-36110317)
chr4 (33-95)||(50291403-50291465)
chr4 (33-88)||(8614310-8614365)
chr4 (33-87)||(9096065-9096119)
chr4 (33-95)||(38960548-38960610)
chr4 (36-98)||(43307256-43307317)
chr4 (39-88)||(19807312-19807361)
chr4 (34-95)||(39699356-39699417)
chr4 (33-106)||(29577324-29577396)
[»] chr1 (22 HSPs)
chr1 (33-106)||(40239999-40240071)
chr1 (33-98)||(40118603-40118668)
chr1 (34-98)||(26760680-26760744)
chr1 (33-98)||(12990373-12990438)
chr1 (37-92)||(8577394-8577449)
chr1 (33-95)||(29094636-29094698)
chr1 (37-95)||(37947112-37947170)
chr1 (34-98)||(51666878-51666942)
chr1 (33-95)||(41564768-41564830)
chr1 (33-95)||(48962107-48962169)
chr1 (39-98)||(37435467-37435527)
chr1 (37-87)||(11121609-11121659)
chr1 (33-95)||(23399877-23399939)
chr1 (37-95)||(31244627-31244685)
chr1 (33-73)||(48257015-48257055)
chr1 (56-106)||(4618755-4618804)
chr1 (33-83)||(11897307-11897357)
chr1 (33-95)||(29638836-29638898)
chr1 (37-83)||(48336347-48336393)
chr1 (33-98)||(12972594-12972659)
chr1 (37-98)||(43105223-43105284)
chr1 (33-85)||(836002-836054)
[»] chr7 (19 HSPs)
chr7 (35-106)||(38197772-38197842)
chr7 (33-106)||(17039268-17039340)
chr7 (33-106)||(37848508-37848580)
chr7 (33-97)||(22331099-22331163)
chr7 (33-92)||(23034201-23034260)
chr7 (33-95)||(47945104-47945166)
chr7 (33-95)||(47950534-47950596)
chr7 (33-98)||(1709402-1709467)
chr7 (33-95)||(24380609-24380671)
chr7 (33-95)||(48639273-48639335)
chr7 (33-98)||(45335981-45336046)
chr7 (39-95)||(27704556-27704612)
chr7 (36-75)||(2980620-2980659)
chr7 (33-95)||(7295588-7295650)
chr7 (34-88)||(41538608-41538662)
chr7 (33-95)||(41910073-41910135)
chr7 (33-85)||(11788376-11788428)
chr7 (33-88)||(29923799-29923853)
chr7 (39-95)||(44185297-44185353)
[»] scaffold0058 (1 HSPs)
scaffold0058 (36-106)||(3054-3123)
[»] scaffold0014 (1 HSPs)
scaffold0014 (33-95)||(145168-145230)
[»] scaffold0286 (1 HSPs)
scaffold0286 (33-106)||(17149-17221)
[»] scaffold0514 (1 HSPs)
scaffold0514 (29-95)||(1731-1797)
[»] scaffold0024 (1 HSPs)
scaffold0024 (33-95)||(48775-48837)
[»] scaffold0172 (1 HSPs)
scaffold0172 (33-78)||(9409-9454)


Alignment Details
Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 21649058 - 21649123
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21649058 gagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttt 21649123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 41776358 - 41776286
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  41776358 gagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctc-ttttcattggtc 41776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 37471826 - 37471754
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  37471826 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctc-ttttcattggtc 37471754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 22203107 - 22203167
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22203107 aatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctttt 22203167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 22836027 - 22836099
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||    
T  22836027 gagtaatgatatttgaacaacttttttgctacaatttttgggataaccttgttgtgctctc-ttttcattggtc 22836099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 33692904 - 33692832
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||    
T  33692904 gagtaatgatatttgaacaacttttttgttataatttttgggacaactttgttgtgctctc-ttttcattggtc 33692832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 1646439 - 1646367
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||| ||||||||||||    
T  1646439 gagtaatgatatttgaacaacttttttgctataatttttggaacaatcttattgtgctctc-ttttcattggtc 1646367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 23709159 - 23709087
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||| |||||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||||||    
T  23709159 gagtaatgttatttgaacaacttttttgctacaatttttgggacaaccttgttatgctctc-ttttcattggtc 23709087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 18550162 - 18550100
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  18550162 gagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctctt 18550100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 25430829 - 25430767
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  25430829 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctt 25430767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 23265241 - 23265306
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||  ||||||||||||||||||    
T  23265241 gagtaatgatatttaaacaacttttttgttacaacttttgcgacaattttgttgtgctctcttttt 23265306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 43590877 - 43590805
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||  || |||||||||| ||||||||||||    
T  43590877 gagtaatgatatttgaacaacttttttactataatttttgagacaattttattgtgctctc-ttttcattggtc 43590805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 32778065 - 32778002
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||||||||| |||||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  32778065 gagtaatgatatttaaacaacttttttgctacaa-ttttgagacaatcttgttgtgctctctttt 32778002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 42651100 - 42651041
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||||||| ||||| || |||||||| |||||||||||||| |||||||    
T  42651100 taatgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctctt 42651041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 1422593 - 1422662
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||||| | || | |||||||||||||    
T  1422593 taatgatatttgaacaactattttgatacaacttttgggacaaccttgttattctat-tttttcattggtc 1422662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 10591761 - 10591818
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgct 90  Q
    |||||||||||||||||||| ||||| |||| || |||||||||||| ||||||||||    
T  10591761 gagtaatgatatttgaacaattttttcgctacaatttttgggacaactttgttgtgct 10591818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 34247957 - 34247885
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||| |||||  |||||  | ||||||||||||||||||||||| ||||| ||||||||||||    
T  34247957 gagtaatgatatttgtacaacccttttgagacaacttttgggacaaccttgttgttctctc-ttttcattggtc 34247885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 34578226 - 34578287
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||| ||||||| ||||| ||||| |||||||||||| ||||||| |||||||    
T  34578226 agtaatgatattttaacaactattttggtataatttttgggacaactttgttgttctctctt 34578287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 34838164 - 34838220
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||| ||||| || ||||||| |||||||||||||||| ||||||    
T  34838164 tgatatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctctt 34838220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 40570691 - 40570648
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggac 76  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  40570691 gagtaatgatatttgaacaacttttttgttataatttttgggac 40570648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 6243202 - 6243145
Alignment:
Q  48 aacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||| |||||||||| ||||||||||||||  ||||||||||||| ||||||||||||    
T  6243202 aacaatttttttgctacaacttttgggacaattttgttgtgctctc-ttttcattggtc 6243145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 13924192 - 13924130
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||| |||||||||||||| ||||| || |||||||| ||||| |||||||| |||||||    
T  13924192 gagtaataatatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctctt 13924130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 14233532 - 14233594
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||| ||||||| | ||||| ||||||||||| |||||| ||||||| |||||||    
T  14233532 gagtaatgatatctgaacaattattttggtataacttttgtgacaactttgttgttctctctt 14233594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 28713276 - 28713222
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||    
T  28713276 gagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgt 28713222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 28720623 - 28720569
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||    
T  28720623 gagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgt 28720569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 28728265 - 28728211
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||    
T  28728265 gagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgt 28728211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 3394593 - 3394652
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||| |||||||||||| | ||||| |||||||||||||||||| || |||| |||||||    
T  3394593 taattatatttgaacaagtattttgatataacttttgggacaactttattgttctctctt 3394652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 4148543 - 4148598
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    ||||| |||||||||||| ||| ||||| || |||||||||||||||||| |||||    
T  4148543 gagtagtgatatttgaacgactcttttggtacaacttttgggacaaccttattgtg 4148598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 39386810 - 39386873
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||||||||||| ||||||||| ||| || |||| |||||| ||| |||| |||||||||    
T  39386810 agtaatgatatttgaaaaactttttttctacaattttttggacaatcttattgtactctctttt 39386873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 8233384 - 8233446
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||||||| || ||||  || ||||||| ||| ||||||||||| |||||||    
T  8233384 gagtaatgatatttgaacatctatttttgtacaactttttggataaccttgttgttctctctt 8233446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 34883346 - 34883285
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||| ||||||| ||||  || ||||||||  ||||||||||||| |||||||    
T  34883346 agtaatgatatttaaacaactattttagtacaacttttgatacaaccttgttgttctctctt 34883285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 27300523 - 27300475
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||| ||| | || |||||||||||||| ||||||||    
T  27300523 tgatatttgaacaactctttcggtacaacttttgggacaatcttgttgt 27300475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 8e-27; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 6458951 - 6458886
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6458951 ggagtaatgatatttgaacaacttttttgctataatttttgggacaaccttgttgtgctctctttt 6458886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 21771361 - 21771426
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||    
T  21771361 gagtagtgatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttatcttttt 21771426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 35616686 - 35616751
Alignment:
Q  30 atggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  35616686 atggagtagtgatatttgaacaactattttggtataaattttgggacaaccttgttgttctctctt 35616751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 42364612 - 42364540
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||||||||||| | || ||||||||||||    
T  42364612 gagtaatgatatttgaacaacttttttccaacaacttttgggacaaccttgttgtgttatc-ttttcattggtc 42364540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 33893765 - 33893705
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||    
T  33893765 aatgatatttgaacaatttttttactacaacttttgggacaaccttgttgtgctatctttt 33893705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 3032023 - 3031945
Alignment:
Q  28 acatggagtaatgatatttgaacaactttttt-gctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||| |||||||||||||||| || ||||||||||||    
T  3032023 acattgagtaatgatatttgaagaactttttttgctataatttttggtacaaccttgttgtgctatc-ttttcattggtc 3031945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 17574112 - 17574166
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  17574112 gagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgt 17574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 22864270 - 22864332
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||| ||||||| ||||||||||    
T  22864270 taatgatatttgaacaactattttgttataatttttgggacaacgttgttgttctctcttttt 22864332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 35595877 - 35595946
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||  || || ||||||||||| ||||||||||||| |||||||||||||    
T  35595877 taatgatatttgaacaacttttttattacaatttttgggacaatcttgttgtgctct-tttttcattggtc 35595946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 37821029 - 37821091
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  37821029 gagtagtgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctctt 37821091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 12612906 - 12612967
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||||||||  ||||| || ||||||||||||||||||||||| |||||||    
T  12612906 agtaatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctctt 12612967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 14522856 - 14522917
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||    
T  14522856 aatgttatttgaacaacttttttgctacaacttttgggacaatcttattgtgctatcttttt 14522917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 18729173 - 18729230
Alignment:
Q  41 atatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||    
T  18729173 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttttt 18729230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 3849681 - 3849617
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||| |||||| |||||| ||||||||||| |||||||| ||||||||||||||||| ||||||    
T  3849681 gagtagtgatatatgaacatcttttttgctacaacttttgagacaaccttgttgtgctatctttt 3849617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 39032492 - 39032554
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||| ||||||    
T  39032492 gagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctctt 39032554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 38920022 - 38919967
Alignment:
Q  40 gatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||| ||||| || ||||||| ||||||||||||||| |||||||    
T  38920022 gatatttgaacaactcttttggtacaacttttaggacaaccttgttgttctctctt 38919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 12203328 - 12203266
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||| |||||||||||||| ||||| || |||||||| ||||| |||||||| |||||||    
T  12203328 gagtaataatatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctctt 12203266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 14126597 - 14126535
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || | ||||||||||||||||| |||| ||||||    
T  14126597 gagtagtgatatttgaacaactcttttggtagagcttttgggacaaccttgatgtgttctctt 14126535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 8442341 - 8442280
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||||||||| ||||| ||||| |||||| ||||  ||||||| |||||||    
T  8442341 agtaatgatatttgaacaactattttggtataatttttggaacaattttgttgttctctctt 8442280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 9940237 - 9940165
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||| |||| ||||| || || |||| ||||||| ||||||| ||||| ||||||||||||    
T  9940237 gagtaatgatatttgaataactattttgatacaatttttaggacaactttgttgttctctc-ttttcattggtc 9940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 12890994 - 12891048
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||||||||||||||||||      | ||||||||||||||||||||||||||||||    
T  12890994 aatgatatttgaacaactttttt------atttttgggacaaccttgttgtgctctctttt 12891048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 25585344 - 25585409
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||| |||||||||||||| ||||| || ||||||||||| ||| |||||||| | |||||||    
T  25585344 gagtaataatatttgaacaactattttgttacaacttttgggagaactttgttgtgttatcttttt 25585409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 35924453 - 35924388
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||| |||||| |||||  | || ||||| |||||||||||||| ||||||||||    
T  35924453 gagtaatgatatttgtacaactcttttgaaacaatttttgagacaaccttgttgttctctcttttt 35924388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11878606 - 11878551
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctct 92  Q
    |||| ||||||||||||||||||| ||| || ||||||||||||||| |||||||||    
T  11878606 taataatatttgaacaactttttt-ctacaatttttgggacaaccttattgtgctct 11878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 36899375 - 36899434
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||| ||||| || ||||||||| |||| |||||| || |||||||||    
T  36899375 tgatatttgaacaactattttggtacaacttttggaacaatcttgttttgttctcttttt 36899434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 43152951 - 43153010
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||||||| ||||| || |||| || ||||||| ||||||| |||||||    
T  43152951 taatgatatttgaacaactattttggtacaactcttaggacaactttgttgttctctctt 43153010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 30103341 - 30103395
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||||||||| ||||   |||| ||||||||||| ||||||||    
T  30103341 gagtaatgatatttgaacaactattttaaaataatttttgggacaatcttgttgt 30103395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 34693104 - 34693166
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| ||||||||||| |||| ||||| || ||||||| ||| |||||||||||| ||||||    
T  34693104 gagtagtgatatttgaataactcttttgatacaacttttaggataaccttgttgtgttctctt 34693166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 266904 - 266969
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||| ||||  ||||| |||| ||||| | ||||| | |||||||||    
T  266904 ggagtaatgatatttgaacaactatttttgtataattttttggacagctttgttcttctctctttt 266969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 48117519 - 48117447
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  48117519 gagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctc-ttttcattggtc 48117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 29846779 - 29846843
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29846779 gagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctttt 29846843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 50745732 - 50745660
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  50745732 gagtaatgatatttgaacaatttttttgctataatttttgggacaaccttgttgtgctctc-ttttcattggtc 50745660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 29057831 - 29057767
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  29057831 gagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctctttt 29057767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 40821748 - 40821812
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  40821748 gagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctctttt 40821812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 9158923 - 9158996
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  9158923 ggagtaatgatggttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctc-ttttcattggtc 9158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 35368794 - 35368730
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  35368794 gagtaatgatatttgaacaacttgtttgctacaacttttgggacaatcttgttgtgctctctttt 35368730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 44827136 - 44827072
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  44827136 gagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctgtctttt 44827072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 43894880 - 43894945
Alignment:
Q  40 gatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  43894880 gatatttgaacaacttttttgctataatttttgggacaactttgttgtgctctc-ttttcattggtc 43894945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 9027796 - 9027734
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||||    
T  9027796 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctt 9027734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 29555729 - 29555791
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  29555729 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctt 29555791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 43149231 - 43149293
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||||    
T  43149231 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctt 43149293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 14838933 - 14838998
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||| |||||||||    
T  14838933 gagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttttt 14838998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 42888661 - 42888725
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||| |||||||||    
T  42888661 gagtaatgatatttgaacaacttttttgttataatttttggg-caaccttgctgtgttctcttttt 42888725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 33972066 - 33972004
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || || ||||| |||||||||||||| |||||||    
T  33972066 gagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgttctctctt 33972004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 44689986 - 44689921
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||||| | |||||  | |||||||||||||||||||||||| |||||||||    
T  44689986 gagtagtgatatttgaacaattcttttggaacaacttttgggacaaccttgttgtgttctcttttt 44689921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 43220030 - 43220089
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctct 92  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||  ||||||| ||||    
T  43220030 gagtagtgatatttgaacaacttttttagtataacttttgggacaattttgttgttctct 43220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 27276917 - 27276863
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||||||||| ||||| || || ||||| ||||||||||||||    
T  27276917 gagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgt 27276863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 27802045 - 27802093
Alignment:
Q  216 atatatttggaagaagaagaaaa---ctattagttgtaggggtaaaact 261  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||    
T  27802045 atatatttggaagaagaagaaaaatactattagttgtaggggtaaaact 27802093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 38296550 - 38296600
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttg 83  Q
    |||||||||||||||||||||| ||||| ||||| |||| |||||||||||    
T  38296550 gagtaatgatatttgaacaactcttttgttataattttttggacaaccttg 38296600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 30664684 - 30664619
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| ||||||||||| |||||||||| || ||||||||| ||||  |||||||| |||||||||    
T  30664684 gagtagtgatatttgaataacttttttggtacaacttttggaacaattttgttgtgttctcttttt 30664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 51385336 - 51385400
Alignment:
Q  41 atatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||| ||||  || |||||||||||||||| |||||| ||||| ||||||||||||    
T  51385336 atatttgaacaactattttagtacaacttttgggacaaccatgttgttctctc-ttttcattggtc 51385400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 26280676 - 26280740
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||| |||||||||||| | ||||| ||||| |||||||| || |||||||| |||||||||    
T  26280676 gagtaataatatttgaacaattattttggtataatttttgggataatcttgttgttctctctttt 26280740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 32152070 - 32152014
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| || || |||| ||||||| |||||||| ||||||    
T  32152070 tgatatttgaacaacttttttggtacaatttttaggacaactttgttgtgttctctt 32152014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 31763990 - 31763927
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttt 96  Q
    |||||||||||||| ||||||| ||||| || || |||||||||||  ||||||| ||||||||    
T  31763990 gagtaatgatatttaaacaactattttggtacaatttttgggacaattttgttgttctctcttt 31763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 7351526 - 7351588
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||| |||||||||||  ||||  ||||||||||||| |||||||||||| ||||||    
T  7351526 gagtagtgatttttgaacaactcatttgaaataacttttgggaaaaccttgttgtgttctctt 7351588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 27802012 - 27802042
Alignment:
Q  1 aaagaatattatcaagtcaatttgatgacat 31  Q
    |||||||||||||||||||||||||||||||    
T  27802012 aaagaatattatcaagtcaatttgatgacat 27802042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 11404842 - 11404887
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaa 78  Q
    |||||||||||||||||||||| ||||| || || |||||||||||    
T  11404842 gagtaatgatatttgaacaactattttggtacaatttttgggacaa 11404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 37585612 - 37585566
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaacct 81  Q
    ||||||||||||||||||||| ||||||  |||||||||| ||||||||    
T  37585612 gagtaatgatatttgaacaacatttttg--ataacttttgtgacaacct 37585566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 55264999 - 55264954
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaac 79  Q
    |||| |||||||||||||| ||||||| ||||| ||||||||||||    
T  55264999 agtagtgatatttgaacaatttttttgatataatttttgggacaac 55264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 45202020 - 45202084
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45202020 gagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctttt 45202084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 11828708 - 11828780
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  11828708 gagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctctc-ttttcattggtc 11828780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 35007989 - 35008061
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35007989 gagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctc-ttttcattggtc 35008061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 35705805 - 35705877
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  35705805 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctc-ttttcattggtc 35705877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 38778079 - 38778014
Alignment:
Q  28 acatggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctc 93  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38778079 acatagagtaatgatatttgaataacttttttgctataacttttgggacaaccttgttgtgctctc 38778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 43205276 - 43205204
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  43205276 gagtaatgttatttgaacaacttttttgctacaacttttgggacaactttgttgtgctctc-ttttcattggtc 43205204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 40115698 - 40115634
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  40115698 gagtaatgatatttgaacaacttttttactacaatttttgggacaaccttgttgtgctctctttt 40115634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 41156890 - 41156963
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||| ||||||||||||    
T  41156890 ggagtaatgatatttgaacaatttttttgctacaacttttgggacaattttgttgtgctctc-ttttcattggtc 41156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 22296017 - 22296089
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||    
T  22296017 gagtaataatatttgaacaactttttttctacaatttttgggacaaccttgttgtgctct-tttttcattggtc 22296089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 27529710 - 27529638
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  27529710 gagtaatgatatttgaacaacttctttgctacaactttcgggacaaccttgttgtgctttc-ttttcattggtc 27529638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 27538820 - 27538892
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  27538820 gagtaataatatttgaacaacttttttgctacaactttcgggacaaccttgttgtgctttc-ttttcattggtc 27538892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 35203637 - 35203709
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| || ||||||||||||    
T  35203637 gagtaatgatatttgaacaatttttttgctacaatttttgggacaaccttgttgtgctatc-ttttcattggtc 35203709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 35798392 - 35798327
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  35798392 gagtaatgttatttgaacaacttttttgttataatttttgggacaaccttgttgtgctttcttttt 35798327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 17999917 - 17999855
Alignment:
Q  43 atttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||    
T  17999917 atttgaacaacttttttgctataacttttgggacaaccttgttgtgatatc-ttttcattggtc 17999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 23141538 - 23141475
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||    
T  23141538 ggagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctctt 23141475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 23553328 - 23553265
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||    
T  23553328 ggagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctctt 23553265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 30340178 - 30340115
Alignment:
Q  32 ggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||    
T  30340178 ggagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctctt 30340115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 5852641 - 5852579
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  5852641 gagtagtgatatttgaacaactcttttggtaaaacttttgggacaaccttgttgtgttctctt 5852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 8757727 - 8757665
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||||    
T  8757727 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctt 8757665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 16463475 - 16463413
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| || || || |||||||||||||| ||||||||||||||||    
T  16463475 gagtaatgatatttgaacaactcttatggtacaacttttgggacaatcttgttgtgctctctt 16463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 28679310 - 28679256
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  28679310 gagtaatgatatttgaacaactcttttggtacaacttttgggacaaccttgttgt 28679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 35518458 - 35518396
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||| ||||||| |||||||    
T  35518458 gagtaatgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctctt 35518396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 11152587 - 11152652
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||||||| ||||||| || | |||||||||||| ||||||||| |||||||||    
T  11152587 gagtaatgatatttgaacaaattttttggtacagcttttgggacaatcttgttgtgttctcttttt 11152652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 13881278 - 13881206
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||| ||||||| ||||||||||||| |||||||| |||||| || |||||||||| ||||||||||||    
T  13881278 gagtaatgacatttgaaaaacttttttgctacaacttttgtgacaactttattgtgctctc-ttttcattggtc 13881206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 14021403 - 14021331
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||| ||||||| ||||||||||||| |||||||| |||||| || |||||||||| ||||||||||||    
T  14021403 gagtaatgacatttgaaaaacttttttgctacaacttttgtgacaactttattgtgctctc-ttttcattggtc 14021331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 44897800 - 44897744
Alignment:
Q  42 tatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||    
T  44897800 tatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttttt 44897744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 12257084 - 12257029
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    ||||| |||||||||||||||||||||| || || |||||||||||||||||||||    
T  12257084 gagtagtgatatttgaacaacttttttggtacaatttttgggacaaccttgttgtg 12257029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 26387719 - 26387774
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  26387719 gagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtg 26387774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 38598238 - 38598299
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||    
T  38598238 gagtagtgatatttgaacaactttttag-tataacttttgtgacaaccttgttgtgttctctt 38598299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 43515074 - 43515009
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| ||||||||||||||||| ||||| || ||||||||||||||||||  ||| ||||||||||    
T  43515074 gagtgatgatatttgaacaactcttttgttacaacttttgggacaaccttaatgttctctcttttt 43515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 18749257 - 18749316
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||| ||||||| ||||| |||| |||||||||||||| | |||||||||    
T  18749257 tgatatttgaacaaattttttggtataatttttaggacaaccttgttgcgttctcttttt 18749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 34141626 - 34141564
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || ||||||||| ||||| |||||||| ||||||    
T  34141626 gagtagtgatatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctctt 34141564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 6885371 - 6885432
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||  || || |||| ||||||| ||||| |||||||||||    
T  6885371 taatgatatttgaacaacttttttaatacaatttttaggacaactttgttatgctctctttt 6885432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 1096231 - 1096293
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || ||||||| ||||||  |||||||| ||||||    
T  1096231 gagtagtgatatttgaacaactcttttgatacaacttttaggacaattttgttgtgttctctt 1096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 37064241 - 37064187
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    ||||| |||||||||| ||||| ||||| || ||||||||||| |||||||||||    
T  37064241 gagtactgatatttgatcaactcttttggtacaacttttgggataaccttgttgt 37064187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 38027503 - 38027565
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||| ||||||| ||||  |||||||||||  |||||||||||||| ||||||    
T  38027503 gagtagtgatatttaaacaactcttttagtataacttttgaaacaaccttgttgtgttctctt 38027565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 9377647 - 9377708
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||| ||||||  ||||| |||||| |||| |||||| ||||||| |||||||    
T  9377647 agtaatgatattttaacaaccattttggtataacctttgagacaactttgttgttctctctt 9377708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 38533084 - 38533145
Alignment:
Q  31 tggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctct 92  Q
    ||||||| ||||||||||| || | ||||| || || |||||||||||||||||||| ||||    
T  38533084 tggagtagtgatatttgaataattcttttggtacaatttttgggacaaccttgttgttctct 38533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 43076478 - 43076415
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| |||||||||||||||| ||||| |||||||||| | || |||||||||| ||| ||||||    
T  43076478 agtagtgatatttgaacaactcttttgatataactttt-gtacgaccttgttgttctcacttttt 43076415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 6997438 - 6997510
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  6997438 gagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctc-ttttcattggtc 6997510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 9395225 - 9395287
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  9395225 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctctt 9395287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 32135325 - 32135397
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  32135325 gagtaatgatatttgaacaacttttttgctacaacttttaggacaatcttgttgtgctctc-ttttcattggtc 32135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 19713177 - 19713113
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  19713177 gagtaatgatatttgaacaacttttttacaacaacttttgggacaaccttgttgtgctctctttt 19713113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 10557592 - 10557520
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||| ||||||||||||    
T  10557592 gagtaatgatatttgaacaacttttttgctacaacttttggaacaatcttgttgtactctc-ttttcattggtc 10557520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 16121335 - 16121270
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  16121335 gagtactgatatttgaacaacttttttgctataacttttgggacaattttgttgtgctatcttttt 16121270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 34792194 - 34792124
Alignment:
Q  28 acatggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |||||    
T  34792194 acatagagtagtgatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttcttttttt 34792124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 2165188 - 2165260
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||| ||||||| ||||| |||||||||| |||||||| |||||||||| ||||||||| ||||||||||||    
T  2165188 gagtaaagatatttaaacaatttttttgctacaacttttgtgacaaccttgatgtgctctc-ttttcattggtc 2165260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 2176821 - 2176893
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||| ||||||| ||||| |||||||||| |||||||| |||||||||| ||||||||| ||||||||||||    
T  2176821 gagtaaagatatttaaacaatttttttgctacaacttttgtgacaaccttgatgtgctctc-ttttcattggtc 2176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 16865712 - 16865640
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||| |||||||||| ||| | | ||||||| ||||||||||||| ||||||||||||    
T  16865712 gagtaatgatatttgaacaatttttttgctacaacatataggacaactttgttgtgctctc-ttttcattggtc 16865640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 608553 - 608611
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||    
T  608553 aatgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctctt 608611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 17443005 - 17442943
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||| ||||||||||| ||||| || |||||||||||||||||| ||||| ||||||    
T  17443005 gagtagtgatttttgaacaactcttttggtacaacttttgggacaaccttattgtgttctctt 17442943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 22422333 - 22422271
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||| | ||||| || ||||||||| ||||| ||||||| |||||||    
T  22422333 gagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctctt 22422271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 7303999 - 7304055
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||| ||||| || |||||||| ||||||||  |||| |||||||    
T  7303999 tgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctctt 7304055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 4878146 - 4878078
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4878146 aatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctc-ttttcattggtc 4878078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 22894051 - 22893986
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  22894051 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttt 22893986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 22945719 - 22945654
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  22945719 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttt 22945654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 1868781 - 1868846
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||    
T  1868781 gagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctcttttttt 1868846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 8487818 - 8487753
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  8487818 gagtaatgatatttgaacaatttttttgctacaacttttgagacaaccttgttgtgctctcttttt 8487753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 24310409 - 24310474
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  24310409 gagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctcttttttt 24310474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 31413674 - 31413739
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  31413674 gagtaatgatatttgaacaacttttttgctacaagttttgtgacaaccttgttgtgctctcttttt 31413739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 4577746 - 4577683
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  4577746 gagtaatgatatttgaacaacttttt-gctacaacttttgggacaaccttgttgtgctctctttt 4577683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 53781725 - 53781797
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  53781725 gagtaatgatatttcaacaacttttgtgctacaacttttgggacaaccttgttatgctctc-ttttcattggtc 53781797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 45678451 - 45678381
Alignment:
Q  28 acatggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| ||||||||||    
T  45678451 acattgagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttttt 45678381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 21766724 - 21766668
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  21766724 tgatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctctt 21766668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 51107334 - 51107402
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||| ||||||||| ||||||||| |||||| |||||||||| |||||||| ||||||||||||    
T  51107334 aatgatattttaacaactttcttgctataatttttggaacaaccttgtcgtgctctc-ttttcattggtc 51107402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 48760467 - 48760397
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||| || ||||||||||||    
T  48760467 agtaatgatatttgaacaacttttttgctacaacttttggaacaatctt-ttgtgctttc-ttttcattggtc 48760397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 32294640 - 32294695
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    ||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  32294640 gagtagtgatatttgaacaactcttttggtataatttttgggacaaccttgttgtg 32294695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 18944468 - 18944406
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||| ||||| ||||||    
T  18944468 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctctt 18944406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 33777074 - 33777012
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||||||||||||||| ||||| || || |||||||| ||||||||||| ||||||||||    
T  33777074 taatgatatttgaacaactattttggtacaatttttgggataaccttgttgttctctcttttt 33777012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 36110317 - 36110255
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||| ||||||    
T  36110317 gagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctctt 36110255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 50291465 - 50291403
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| || ||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  50291465 gagtagtgttatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctt 50291403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 8614365 - 8614310
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    ||||| |||||||||||||||||||||  || || |||||||||||||||||||||    
T  8614365 gagtagtgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtg 8614310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 9096119 - 9096065
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||||||| | ||||| || ||||||||| |||||||||||||    
T  9096119 gagtaatgatatttgaacaattattttgatacaacttttggtacaaccttgttgt 9096065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 38960548 - 38960610
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||| ||||||||| ||||||    
T  38960548 gagtagtgatatttgaacaactcttttgatacaatttttgggacaatcttgttgtgttctctt 38960610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 43307256 - 43307317
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| |||||||||||||||||||  || || |||||||| ||||||||||||||||||||||    
T  43307256 taattatatttgaacaacttttttt-tacaatttttgggataaccttgttgtgctctcttttt 43307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 19807312 - 19807361
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    |||||||||||||||||||||  || || |||||||||||||||||||||    
T  19807312 tgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtg 19807361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 39699356 - 39699417
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||| |||||||||||||||| ||||| || ||||||||| |||||||| ||||| ||||||    
T  39699356 agtagtgatatttgaacaactcttttgatacaacttttggaacaaccttattgtgttctctt 39699417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 29577324 - 29577396
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||| ||||||||||| ||  |||  || || |||||||||||||||||||| ||||| ||||||||||||    
T  29577324 gagtaattatatttgaacatctacttttgtacaatttttgggacaaccttgttgttctctc-ttttcattggtc 29577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 40239999 - 40240071
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  40239999 gagtaataatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctatc-ttttcattggtc 40240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 40118603 - 40118668
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| |||||||    
T  40118603 gagtaatgatatttgaacaatttttttgctacaatttttgggacaaccttgttgtgctttcttttt 40118668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 26760744 - 26760680
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  26760744 agtaatgttatttaaacaacttttttgttataacttttgagacaaccttgttgtgctctcttttt 26760680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 12990373 - 12990438
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||    
T  12990373 gagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttttt 12990438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 8577394 - 8577449
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctct 92  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  8577394 aatgatatttgaacaactattttggtataacttttgggacaaccttgttgttctct 8577449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 29094636 - 29094698
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||| ||||| ||||||    
T  29094636 gagtaatgatatttgaacaactcttttgatacaacttttgggacaaccttattgtgttctctt 29094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 37947112 - 37947170
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||    
T  37947112 aatgatatttgaacaactattttgttacaacttttgggacaaccttgttgttctctctt 37947170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 51666942 - 51666878
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||  ||||||||||||||||||    
T  51666942 agtagtgatatttgaacaactattttgctataatttttgggataatattgttgtgctctcttttt 51666878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 41564768 - 41564830
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||| ||||||    
T  41564768 gagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctt 41564830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 48962169 - 48962107
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||| ||||||    
T  48962169 gagtattgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctt 48962107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 37435467 - 37435527
Alignment:
Q  39 tgatatttgaacaactttt-ttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||| |||||    
T  37435467 tgatatttgaacaattttttttgctataatttttgggacaactttgttgtgctcttttttt 37435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 11121659 - 11121609
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgt 87  Q
    |||||||||||||||||| ||||| ||||||||||| ||||| ||||||||    
T  11121659 aatgatatttgaacaactattttggtataacttttgtgacaatcttgttgt 11121609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 23399877 - 23399939
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||| ||||||| ||||| || || ||||||||||||||||||||| ||||||    
T  23399877 gagtagtgatatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctctt 23399939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 31244627 - 31244685
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||| ||||| || ||| |||||||||||| |||||| |||||||    
T  31244627 aatgatatttgaacaactattttggtacaacatttgggacaaccatgttgttctctctt 31244685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 48257055 - 48257015
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgg 73  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  48257055 gagtaatgatatttgaacaacttttttgctacaatttttgg 48257015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 4618804 - 4618755
Alignment:
Q  56 ttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||| |||||||||||||| ||||||||||| |||| |||||||||||||    
T  4618804 ttttggtataacttttgggataaccttgttgttctct-tttttcattggtc 4618755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 11897357 - 11897307
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttg 83  Q
    |||||||||||||||||||||| ||||| || || ||||| ||||||||||    
T  11897357 gagtaatgatatttgaacaactcttttgttacaatttttgtgacaaccttg 11897307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 29638898 - 29638836
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || || |||||||||||  |||||||| ||||||    
T  29638898 gagtagtgatatttgaacaactcttttggtacaatttttgggacaattttgttgtgttctctt 29638836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 48336347 - 48336393
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttg 83  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||    
T  48336347 aatgatatttgaacaactattttgttacaactttttggacaaccttg 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 12972594 - 12972659
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||||| | ||||| |||||||||| ||||||  |||||||| ||| |||||    
T  12972594 gagtagtgatatttgaacaattcttttggtataacttttaggacaattttgttgtgttcttttttt 12972659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 43105284 - 43105223
Alignment:
Q  37 aatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    |||||||||||||||| | ||||| || || |||||||||||| || |||| ||||||||||    
T  43105284 aatgatatttgaacaattattttggtacaatttttgggacaactttattgttctctcttttt 43105223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 836054 - 836002
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgtt 85  Q
    ||||| || ||||||||||||| ||||| || |||||||||||||| ||||||    
T  836054 gagtagtgttatttgaacaactcttttggtacaacttttgggacaatcttgtt 836002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 38197842 - 38197772
Alignment:
Q  35 gtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||    
T  38197842 gtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctatc-ttttcattggtc 38197772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 17039340 - 17039268
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  17039340 gagtaacgatatttgaacaatttttttgctataatttttgggacaaccttgttgtgttctc-ttttcattggtc 17039268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 37848508 - 37848580
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||    
T  37848508 gagtaattatatttgaacaacttttttgctacaacttttaggataaccttgttgtgctctc-ttttcattggtc 37848580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 22331099 - 22331163
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttt 97  Q
    |||||||| ||||||||||| |||||||||| || |||||||||||||||||| |||||||||||    
T  22331099 gagtaatgttatttgaacaatttttttgctacaatttttgggacaaccttgttatgctctctttt 22331163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 23034201 - 23034260
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctct 92  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  23034201 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctct 23034260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 47945166 - 47945104
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  47945166 gagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctctt 47945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 47950596 - 47950534
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  47950596 gagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctctt 47950534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 1709467 - 1709402
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||||||| ||||| ||||| ||||||||||| ||||||||| |||||||||    
T  1709467 gagtagtgatatttgaacaactcttttggtataatttttgggacaatcttgttgtgttctcttttt 1709402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 24380609 - 24380671
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || ||||||||| |||||||||||||| ||||||    
T  24380609 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctctt 24380671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 48639273 - 48639335
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || ||||||||| |||||||||||||| ||||||    
T  48639273 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctctt 48639335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 45336046 - 45335981
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctcttttt 98  Q
    ||||| |||||||||||| ||| ||||| || || |||||||||||||||||||| ||||||||||    
T  45336046 gagtagtgatatttgaactactcttttggtacaaattttgggacaaccttgttgttctctcttttt 45335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 27704612 - 27704556
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||| ||||| || ||||||||||||||| |||||||| ||||||    
T  27704612 tgatatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctctt 27704556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 2980620 - 2980659
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttggga 75  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  2980620 taatgatatttgaacaacttttttgatataacttttggga 2980659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 7295650 - 7295588
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||||||||| ||||||||||||  | ||||||||| ||||||||||| | |||||||    
T  7295650 gagtaatgatatttgtacaacttttttgagacaacttttggaacaaccttgttattctctctt 7295588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 41538662 - 41538608
Alignment:
Q  34 agtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    |||| |||||||||||||| | ||||| || ||||||||||||||||||||||||    
T  41538662 agtagtgatatttgaacaattcttttgatacaacttttgggacaaccttgttgtg 41538608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 41910073 - 41910135
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||| | ||||| || ||||||| |||||||||||||||| ||||||    
T  41910073 gagtagtgatatttgaacaattcttttggtacaacttttaggacaaccttgttgtgttctctt 41910135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 11788376 - 11788428
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgtt 85  Q
    |||||||||||||||||||||| ||||| || |||||||||| ||||| ||||    
T  11788376 gagtaatgatatttgaacaactattttgatacaacttttgggccaaccatgtt 11788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 29923853 - 29923799
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtg 88  Q
    ||||| |||||||||||||||| ||||| || ||||||| ||||||||||||||||    
T  29923853 gagtagtgatatttgaacaactcttttggtacaactttt-ggacaaccttgttgtg 29923799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 44185353 - 44185297
Alignment:
Q  39 tgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||| ||||| || |||||||| ||||||||  |||| |||||||    
T  44185353 tgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctctt 44185297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 3123 - 3054
Alignment:
Q  36 taatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||    
T  3123 taatgatatttgaacaacttttttgctacaacttttgggacaactttattgtgctctc-ttttcattggtc 3054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 145230 - 145168
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  145230 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctt 145168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 17221 - 17149
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctttttcattggtc 106  Q
    |||||| ||||||| ||||| |||||||||| |||||||| |||||||||| ||||||||| ||||||||||||    
T  17221 gagtaaagatatttaaacaatttttttgctacaacttttgtgacaaccttgatgtgctctc-ttttcattggtc 17149  T

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Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 1731 - 1797
Alignment:
Q  29 catggagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    ||||||||| |||||||||||||||| ||||| || |||||||||||||| |||||| || ||||||    
T  1731 catggagtagtgatatttgaacaactcttttggtacaacttttgggacaatcttgttatgttctctt 1797  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 48837 - 48775
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaaccttgttgtgctctctt 95  Q
    |||||||||||||||||||| | ||||| || || ||||||||||||||||||||| ||||||    
T  48837 gagtaatgatatttgaacaattcttttgatacaatttttgggacaaccttgttgtgttctctt 48775  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 9454 - 9409
Alignment:
Q  33 gagtaatgatatttgaacaacttttttgctataacttttgggacaa 78  Q
    |||||||||||||||||||||| ||||| ||||| |||| ||||||    
T  9454 gagtaatgatatttgaacaactcttttgttataatttttaggacaa 9409  T

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