View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5394_low_12 (Length: 203)
Name: NF5394_low_12
Description: NF5394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5394_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 2588340 - 2588512
Alignment:
| Q |
16 |
gaagaaggtttggaaagtttgtgttttgacggccattatcaaacacatgtctccaaatattcagaagattaagagtattgctagacgttcgaggagcctg |
115 |
Q |
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| T |
2588340 |
gaagaaggtttggaaagtttgtgttttgacggccattatcaaacatatgtctccaaatattcagaagattaagagtattgctagacgttcgaggagcctg |
2588439 |
T |
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| Q |
116 |
caaaatagattcactgctaaggatacagctatttggcttgctgttattgattatgaagaaagattggcaagag |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2588440 |
caaaatagattcactgctaaggatacagctatttggcttgctgttattgattatgaagaaagattggcaagag |
2588512 |
T |
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