View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5395-Insertion-1 (Length: 188)
Name: NF5395-Insertion-1
Description: NF5395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5395-Insertion-1 |
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Alignment Details
Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 46512596 - 46512454
Alignment:
| Q |
8 |
ataattcggttgtttgaaacatannnnnnnatttatttgtttataattaggttgggaaattgctcattgttttatagctttatgtgaagtgggagacaat |
107 |
Q |
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| T |
46512596 |
ataattcggttgtttgaaacatatttttttatttatttgtttataattaggttgggaaattgctcattgttttatagctttatgtgaagtgggagacaat |
46512497 |
T |
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| Q |
108 |
ttttggcatatgatgaatgtgtgttgacagggtcagtttgagg |
150 |
Q |
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| T |
46512496 |
ttttggcatatgatgaatgtgtgttgatagggtcagtttgagg |
46512454 |
T |
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