View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5395-Insertion-10 (Length: 208)
Name: NF5395-Insertion-10
Description: NF5395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5395-Insertion-10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 7904899 - 7905099
Alignment:
| Q |
8 |
ctgagaatggtgcaaagatttttgtgaaccatgaaaaagatccaaaatataacattgtagatcatcgaccgtatacttgatccacttctcatcaatgtta |
107 |
Q |
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| T |
7904899 |
ctgagaatggtgcaaagatttttgtgaaccatgaaaaagatccaaaatataacattgtagatcatcgaccgtatacttgatccacttctcatcaatgtta |
7904998 |
T |
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| Q |
108 |
gacgagtttctacctgtataacttcggtaagcaggaataactttctgagaaaccgatatttgtaggtcttcgcgaagttctttatcaggtacactccacc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7904999 |
gacgagtttctacctgtataacttcggtaagcaggaatcaatttctgagaaaccgatatttgtaggtcttcgcgaagttctttatcaggtacactccacc |
7905098 |
T |
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| Q |
208 |
c |
208 |
Q |
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| T |
7905099 |
c |
7905099 |
T |
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