View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5395-Insertion-7 (Length: 390)

Name: NF5395-Insertion-7
Description: NF5395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5395-Insertion-7
NF5395-Insertion-7
[»] chr6 (29 HSPs)
chr6 (8-390)||(414989-415371)
chr6 (289-388)||(9093561-9093660)
chr6 (289-375)||(837234-837320)
chr6 (289-359)||(3785734-3785804)
chr6 (220-378)||(34611769-34611927)
chr6 (290-345)||(24626262-24626317)
chr6 (301-359)||(6538490-6538548)
chr6 (289-359)||(25426136-25426206)
chr6 (289-335)||(31671132-31671178)
chr6 (291-377)||(33787761-33787847)
chr6 (305-386)||(6536597-6536678)
chr6 (293-373)||(6909892-6909972)
chr6 (263-377)||(24836218-24836329)
chr6 (290-345)||(4006681-4006736)
chr6 (298-345)||(33828621-33828668)
chr6 (308-362)||(1401094-1401148)
chr6 (289-359)||(1402962-1403032)
chr6 (289-390)||(4420611-4420710)
chr6 (316-362)||(9041467-9041513)
chr6 (298-360)||(13907560-13907622)
chr6 (289-386)||(2735035-2735132)
chr6 (298-343)||(7485118-7485163)
chr6 (289-378)||(20671881-20671969)
chr6 (289-377)||(281864-281952)
chr6 (289-345)||(2112167-2112222)
chr6 (231-383)||(3155084-3155235)
chr6 (289-361)||(29274261-29274333)
chr6 (318-390)||(31624085-31624157)
chr6 (291-363)||(31776305-31776377)
[»] chr2 (50 HSPs)
chr2 (231-363)||(6167313-6167445)
chr2 (289-388)||(26626838-26626938)
chr2 (289-375)||(11513864-11513950)
chr2 (289-390)||(22681188-22681289)
chr2 (298-389)||(1625875-1625966)
chr2 (299-388)||(40279173-40279262)
chr2 (290-389)||(8017401-8017500)
chr2 (289-360)||(32592553-32592623)
chr2 (289-390)||(29316778-29316879)
chr2 (265-390)||(33931573-33931698)
chr2 (316-389)||(35485910-35485983)
chr2 (289-386)||(41851501-41851598)
chr2 (298-358)||(18066103-18066163)
chr2 (324-388)||(40279268-40279332)
chr2 (324-388)||(40279338-40279402)
chr2 (303-390)||(680483-680570)
chr2 (289-356)||(39073726-39073793)
chr2 (311-390)||(40158706-40158785)
chr2 (274-345)||(41407026-41407097)
chr2 (291-346)||(44439407-44439462)
chr2 (289-375)||(12464491-12464577)
chr2 (288-386)||(26201994-26202091)
chr2 (306-388)||(29628748-29628830)
chr2 (289-386)||(43279536-43279631)
chr2 (240-345)||(3673724-3673829)
chr2 (268-345)||(43199359-43199436)
chr2 (316-360)||(20952348-20952392)
chr2 (324-384)||(40279408-40279468)
chr2 (290-334)||(43199852-43199896)
chr2 (289-360)||(2416279-2416350)
chr2 (247-362)||(10143096-10143211)
chr2 (232-378)||(18962052-18962199)
chr2 (289-360)||(20933721-20933792)
chr2 (261-388)||(28039337-28039464)
chr2 (290-345)||(33941876-33941931)
chr2 (289-336)||(36114580-36114627)
chr2 (268-335)||(42907304-42907371)
chr2 (263-345)||(4090289-4090371)
chr2 (293-335)||(9750916-9750958)
chr2 (290-375)||(15757676-15757762)
chr2 (289-359)||(28206233-28206303)
chr2 (232-362)||(28803537-28803667)
chr2 (311-389)||(43985007-43985085)
chr2 (290-363)||(43173189-43173262)
chr2 (289-390)||(44438842-44438943)
chr2 (300-388)||(750648-750735)
chr2 (289-337)||(25609762-25609810)
chr2 (300-388)||(36043881-36043969)
chr2 (48-111)||(37986759-37986823)
chr2 (298-390)||(43985184-43985276)
[»] chr5 (47 HSPs)
chr5 (220-390)||(42582808-42582979)
chr5 (305-387)||(6587113-6587195)
chr5 (289-386)||(16937890-16937987)
chr5 (289-377)||(12425537-12425625)
chr5 (223-388)||(9202753-9202919)
chr5 (223-388)||(39105363-39105529)
chr5 (263-378)||(912662-912779)
chr5 (274-345)||(2568608-2568680)
chr5 (311-389)||(37588364-37588442)
chr5 (209-377)||(1465036-1465203)
chr5 (289-377)||(10272447-10272535)
chr5 (311-390)||(37526202-37526281)
chr5 (263-390)||(42583089-42583216)
chr5 (320-390)||(15074752-15074822)
chr5 (301-359)||(25461681-25461739)
chr5 (315-360)||(32009684-32009729)
chr5 (325-390)||(40205077-40205142)
chr5 (324-388)||(4014429-4014493)
chr5 (298-346)||(12554494-12554542)
chr5 (302-386)||(16457986-16458070)
chr5 (298-366)||(17652236-17652304)
chr5 (311-390)||(37690639-37690719)
chr5 (315-386)||(7907873-7907944)
chr5 (298-360)||(11700137-11700200)
chr5 (291-366)||(12975315-12975390)
chr5 (289-356)||(34102351-34102418)
chr5 (289-343)||(13244532-13244586)
chr5 (289-383)||(14295472-14295566)
chr5 (311-389)||(15308997-15309075)
chr5 (316-389)||(2880551-2880624)
chr5 (298-359)||(7319381-7319442)
chr5 (289-390)||(7674614-7674715)
chr5 (319-388)||(7984965-7985034)
chr5 (316-377)||(18543213-18543273)
chr5 (304-390)||(19138720-19138808)
chr5 (316-357)||(27298066-27298107)
chr5 (316-345)||(34245717-34245746)
chr5 (301-366)||(36227773-36227838)
chr5 (329-390)||(37611218-37611279)
chr5 (329-390)||(37787948-37788009)
chr5 (289-334)||(42181151-42181196)
chr5 (67-123)||(2703468-2703524)
chr5 (289-341)||(14932256-14932307)
chr5 (322-390)||(17368675-17368743)
chr5 (289-341)||(36539712-36539764)
chr5 (293-345)||(42573822-42573874)
chr5 (322-374)||(43300877-43300929)
[»] chr4 (47 HSPs)
chr4 (260-390)||(42121424-42121554)
chr4 (289-389)||(17884034-17884134)
chr4 (290-360)||(27043863-27043933)
chr4 (289-377)||(47118981-47119069)
chr4 (289-360)||(9760406-9760477)
chr4 (268-335)||(47946143-47946210)
chr4 (289-360)||(50681122-50681193)
chr4 (289-359)||(44797852-44797922)
chr4 (302-383)||(50800040-50800120)
chr4 (302-375)||(53294132-53294205)
chr4 (289-341)||(25885825-25885877)
chr4 (289-344)||(13949893-13949948)
chr4 (290-389)||(29263337-29263436)
chr4 (232-327)||(30024609-30024704)
chr4 (298-389)||(30066770-30066861)
chr4 (289-375)||(44138525-44138611)
chr4 (321-386)||(21731663-21731728)
chr4 (289-390)||(24929459-24929560)
chr4 (209-345)||(26520277-26520414)
chr4 (289-358)||(39691178-39691247)
chr4 (289-386)||(54069424-54069521)
chr4 (289-377)||(51630077-51630165)
chr4 (289-388)||(3155569-3155668)
chr4 (315-390)||(7694013-7694088)
chr4 (299-386)||(17822872-17822959)
chr4 (211-377)||(26883882-26884049)
chr4 (289-388)||(31038872-31038971)
chr4 (298-357)||(40174538-40174597)
chr4 (298-345)||(44638221-44638268)
chr4 (289-347)||(4071848-4071906)
chr4 (238-383)||(6364063-6364209)
chr4 (263-389)||(6466050-6466176)
chr4 (299-345)||(35571679-35571725)
chr4 (324-366)||(40831056-40831098)
chr4 (289-355)||(42685390-42685456)
chr4 (289-390)||(6987744-6987845)
chr4 (291-360)||(28615302-28615371)
chr4 (316-389)||(35405940-35406013)
chr4 (268-345)||(49219084-49219161)
chr4 (289-390)||(52746843-52746944)
chr4 (323-360)||(54426043-54426080)
chr4 (289-345)||(437480-437536)
chr4 (321-386)||(2244047-2244114)
chr4 (290-358)||(7601726-7601794)
chr4 (317-384)||(11802528-11802595)
chr4 (311-351)||(24444026-24444066)
chr4 (274-389)||(54325041-54325156)
[»] chr7 (48 HSPs)
chr7 (263-390)||(12110300-12110427)
chr7 (289-390)||(38010680-38010781)
chr7 (292-390)||(8094239-8094337)
chr7 (302-360)||(46280305-46280363)
chr7 (263-388)||(28165031-28165156)
chr7 (289-386)||(40688993-40689090)
chr7 (289-390)||(48157123-48157224)
chr7 (321-360)||(19022618-19022657)
chr7 (289-336)||(30180017-30180064)
chr7 (289-388)||(39967886-39967985)
chr7 (316-375)||(45790443-45790502)
chr7 (293-360)||(47177606-47177673)
chr7 (289-375)||(20881654-20881740)
chr7 (289-383)||(22283754-22283848)
chr7 (329-386)||(21568502-21568559)
chr7 (209-242)||(25130261-25130294)
chr7 (311-375)||(20526947-20527011)
chr7 (231-363)||(27481324-27481456)
chr7 (289-333)||(28613594-28613638)
chr7 (289-360)||(420326-420397)
chr7 (289-344)||(1417230-1417285)
chr7 (289-360)||(20269542-20269613)
chr7 (304-363)||(30812129-30812188)
chr7 (291-386)||(33601417-33601511)
chr7 (298-377)||(44821934-44822013)
chr7 (298-376)||(24909639-24909717)
chr7 (263-377)||(28128411-28128524)
chr7 (292-386)||(30570938-30571032)
chr7 (305-359)||(34744010-34744064)
chr7 (289-359)||(39279729-39279799)
chr7 (292-390)||(39907772-39907870)
chr7 (302-360)||(43694603-43694661)
chr7 (316-389)||(2825235-2825308)
chr7 (210-243)||(12110262-12110295)
chr7 (291-336)||(13960884-13960929)
chr7 (303-360)||(18350740-18350797)
chr7 (301-346)||(19302606-19302651)
chr7 (298-363)||(24895331-24895396)
chr7 (289-362)||(27548229-27548302)
chr7 (289-366)||(28341083-28341160)
chr7 (301-386)||(38138486-38138571)
chr7 (289-341)||(119876-119928)
chr7 (59-111)||(4017809-4017861)
chr7 (304-360)||(4970826-4970882)
chr7 (323-383)||(18965720-18965780)
chr7 (311-343)||(31002862-31002894)
chr7 (315-383)||(33673069-33673137)
chr7 (289-341)||(34083577-34083629)
[»] chr3 (56 HSPs)
chr3 (293-388)||(21367637-21367732)
chr3 (289-375)||(30443859-30443945)
chr3 (302-388)||(402547-402633)
chr3 (289-361)||(30956658-30956730)
chr3 (289-361)||(30972470-30972542)
chr3 (210-334)||(36101455-36101579)
chr3 (292-389)||(33405170-33405268)
chr3 (224-334)||(36139779-36139889)
chr3 (298-360)||(36631084-36631146)
chr3 (289-378)||(1816549-1816638)
chr3 (289-390)||(21574457-21574557)
chr3 (263-360)||(36189506-36189603)
chr3 (289-389)||(36783338-36783438)
chr3 (321-386)||(39980727-39980792)
chr3 (289-389)||(2201094-2201194)
chr3 (266-342)||(10101527-10101603)
chr3 (266-342)||(10212452-10212528)
chr3 (289-345)||(14145878-14145934)
chr3 (290-386)||(20880444-20880539)
chr3 (302-386)||(53789468-53789552)
chr3 (289-360)||(12862281-12862351)
chr3 (311-378)||(14548736-14548803)
chr3 (315-386)||(18405838-18405909)
chr3 (293-360)||(20257505-20257572)
chr3 (302-360)||(47132310-47132368)
chr3 (289-390)||(39602213-39602313)
chr3 (274-390)||(45541522-45541638)
chr3 (317-378)||(50600193-50600254)
chr3 (330-386)||(40608388-40608444)
chr3 (289-385)||(44061032-44061127)
chr3 (321-357)||(49034299-49034335)
chr3 (288-335)||(20807065-20807112)
chr3 (317-388)||(24085343-24085414)
chr3 (316-379)||(44295522-44295585)
chr3 (313-360)||(49092769-49092816)
chr3 (289-335)||(12923383-12923429)
chr3 (291-345)||(19679376-19679430)
chr3 (268-378)||(24887298-24887408)
chr3 (320-386)||(25776114-25776180)
chr3 (289-363)||(49465695-49465767)
chr3 (305-390)||(50952314-50952400)
chr3 (54-111)||(15864820-15864877)
chr3 (289-386)||(20170489-20170586)
chr3 (315-360)||(22203422-22203467)
chr3 (290-375)||(35959474-35959559)
chr3 (289-390)||(45432942-45433043)
chr3 (266-342)||(10357376-10357452)
chr3 (311-375)||(21865564-21865628)
chr3 (289-345)||(25447292-25447348)
chr3 (298-386)||(28622006-28622094)
chr3 (316-360)||(33046842-33046886)
chr3 (289-345)||(37788826-37788882)
chr3 (289-345)||(40122801-40122856)
chr3 (302-346)||(41057017-41057061)
chr3 (315-363)||(42733967-42734015)
chr3 (220-252)||(55113560-55113592)
[»] chr1 (69 HSPs)
chr1 (293-390)||(10799432-10799529)
chr1 (301-360)||(3234048-3234107)
chr1 (209-390)||(31517743-31517922)
chr1 (292-386)||(473133-473227)
chr1 (301-357)||(17603420-17603476)
chr1 (292-387)||(7218080-7218175)
chr1 (298-357)||(41505661-41505720)
chr1 (289-360)||(49888733-49888804)
chr1 (293-390)||(10809315-10809412)
chr1 (289-362)||(27738211-27738284)
chr1 (291-388)||(27820342-27820439)
chr1 (289-386)||(34290202-34290299)
chr1 (289-390)||(37842358-37842459)
chr1 (292-364)||(25006063-25006135)
chr1 (292-376)||(34952184-34952268)
chr1 (317-376)||(8130430-8130489)
chr1 (290-357)||(14576689-14576756)
chr1 (295-358)||(27976567-27976630)
chr1 (315-386)||(42174847-42174918)
chr1 (289-388)||(51695500-51695598)
chr1 (268-390)||(10199411-10199533)
chr1 (289-375)||(51688671-51688756)
chr1 (289-386)||(24915058-24915155)
chr1 (289-390)||(30257649-30257750)
chr1 (220-281)||(47885120-47885181)
chr1 (289-345)||(836387-836443)
chr1 (289-345)||(5421968-5422024)
chr1 (299-390)||(7472287-7472379)
chr1 (289-357)||(13809964-13810032)
chr1 (289-377)||(33204404-33204492)
chr1 (289-341)||(36070216-36070268)
chr1 (268-344)||(49517015-49517091)
chr1 (305-360)||(7069283-7069338)
chr1 (289-360)||(9572141-9572212)
chr1 (300-335)||(11218003-11218038)
chr1 (311-390)||(23902070-23902149)
chr1 (298-345)||(37295766-37295813)
chr1 (290-333)||(37841965-37842008)
chr1 (315-386)||(45975682-45975753)
chr1 (323-377)||(12564515-12564569)
chr1 (315-377)||(35590908-35590970)
chr1 (263-345)||(48830124-48830206)
chr1 (305-358)||(1510345-1510398)
chr1 (264-345)||(3924565-3924646)
chr1 (209-250)||(4920894-4920935)
chr1 (299-360)||(6556947-6557008)
chr1 (316-389)||(14629970-14630043)
chr1 (293-358)||(17269220-17269285)
chr1 (289-390)||(25479547-25479648)
chr1 (289-390)||(30371114-30371215)
chr1 (289-346)||(30581995-30582052)
chr1 (290-343)||(33186233-33186286)
chr1 (311-384)||(35179127-35179200)
chr1 (323-388)||(38503470-38503535)
chr1 (289-326)||(41163071-41163108)
chr1 (323-360)||(49938747-49938784)
chr1 (325-386)||(51929546-51929607)
chr1 (298-390)||(3224398-3224490)
chr1 (315-375)||(7137016-7137076)
chr1 (322-370)||(7927875-7927923)
chr1 (318-362)||(10581108-10581152)
chr1 (289-377)||(15361679-15361767)
chr1 (311-363)||(15515529-15515581)
chr1 (301-345)||(23445312-23445356)
chr1 (311-359)||(25005831-25005879)
chr1 (289-345)||(29793748-29793804)
chr1 (209-281)||(44375449-44375521)
chr1 (264-300)||(46969596-46969632)
chr1 (268-345)||(49557086-49557165)
[»] chr8 (41 HSPs)
chr8 (305-388)||(43504733-43504816)
chr8 (291-383)||(7918783-7918875)
chr8 (230-345)||(31884501-31884616)
chr8 (289-376)||(3537046-3537135)
chr8 (289-354)||(38602299-38602364)
chr8 (231-378)||(10114397-10114544)
chr8 (299-375)||(18133632-18133708)
chr8 (289-345)||(24558819-24558875)
chr8 (291-346)||(10758303-10758358)
chr8 (289-390)||(2595000-2595101)
chr8 (315-360)||(11861796-11861841)
chr8 (291-375)||(12976181-12976264)
chr8 (330-390)||(20672757-20672817)
chr8 (289-345)||(34770858-34770914)
chr8 (289-387)||(2482831-2482927)
chr8 (311-390)||(11795080-11795159)
chr8 (299-386)||(27028807-27028894)
chr8 (299-346)||(30043793-30043840)
chr8 (263-390)||(34849043-34849170)
chr8 (300-378)||(10120733-10120811)
chr8 (268-390)||(12361137-12361259)
chr8 (289-387)||(21653047-21653145)
chr8 (311-377)||(28769355-28769421)
chr8 (231-345)||(41336693-41336807)
chr8 (304-345)||(9834837-9834878)
chr8 (311-376)||(9956831-9956896)
chr8 (290-335)||(16210944-16210989)
chr8 (291-360)||(26771233-26771302)
chr8 (301-366)||(28763346-28763411)
chr8 (289-390)||(30389065-30389166)
chr8 (323-360)||(30657805-30657842)
chr8 (315-360)||(31891883-31891928)
chr8 (289-345)||(1470904-1470960)
chr8 (299-363)||(13652191-13652255)
chr8 (299-363)||(13710834-13710898)
chr8 (67-111)||(34863481-34863525)
chr8 (289-360)||(35534646-35534715)
chr8 (311-351)||(35869825-35869865)
chr8 (324-376)||(39881769-39881821)
chr8 (288-388)||(42215311-42215411)
chr8 (254-342)||(42597332-42597420)
[»] scaffold0024 (1 HSPs)
scaffold0024 (231-345)||(27484-27598)
[»] scaffold0652 (1 HSPs)
scaffold0652 (311-358)||(3004-3051)
[»] scaffold0475 (1 HSPs)
scaffold0475 (298-334)||(11814-11850)


Alignment Details
Target: chr6 (Bit Score: 371; Significance: 0; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 8 - 390
Target Start/End: Original strand, 414989 - 415371
Alignment:
Q  8 tgttgtaatctacgaaccacttgacatatgtaagaactttggacacgacatgacacgtcgacacggataactatttgaaaaaacgatataattgaatgta 107  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  414989 tgttgtaatctacgaatcacttgacatatgtaagaactttggacacgacatgacacgtcgacacggataactatttgaaaaaacgatataattgaatgta 415088  T
Q  108 atcaaatatgtgagtgacatgtgttagactcgggacacactttcgatcaaacggggttggtgctacataggttatgcttctctatcaaactggatttggg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  415089 atcaaatatgtgagtgacatgtgttagactcgggacacactttcgatcaaacggggttggtgctacataggttatgcttctctatcaaactggatttagg 415188  T
Q  208 cggataaacagattaatttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  415189 cggataaacagattaatttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaat 415288  T
Q  308 tgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  415289 tgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 415371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 388
Target Start/End: Complemental strand, 9093660 - 9093561
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||| ||||||| |  | ||||||||| | ||  ||||||||||||| |||| ||||    
T  9093660 agataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaaca 9093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 837320 - 837234
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||||||| |||||||||| ||| || |||||||||||| ||||| || ||||||  ||||||||||||| ||  ||||||||||    
T  837320 agataaaacagagttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 3785804 - 3785734
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    |||||||| ||||||||| || |||||||||||||||||| ||||||| ||||||||  |||||| |||||    
T  3785804 agataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagcttat 3785734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 378
Target Start/End: Original strand, 34611769 - 34611927
Alignment:
Q  220 ttaatttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtata 319  Q
    ||||||| || ||||||||||||| | ||||    |||| || ||| |||||  ||||||||||| || |||||||| |||||||||||| |||| ||||    
T  34611769 ttaatttacagcttatagcataagcgcttatattttaagctcttattaataaactatttctattatgcaagataaaataaagttaaattgttttcttata 34611868  T
Q  320 agctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    ||||||| | ||||||  ||||  ||  || ||||||||||||   |||||||||||||    
T  34611869 agctataggctgttttattaagtcatcttgaagaacttatggaggtaagctgaaaacag 34611927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 24626262 - 24626317
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||| |||||||||    
T  24626262 gataaaacaaagttaaattgtttttgtatattctataagttgttttcataagctat 24626317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 6538490 - 6538548
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    ||||||||| ||  ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  6538490 gttaaattgtttatgtatatgctataagttgtttttataggctatattggagaacttat 6538548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 25426136 - 25426206
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    |||||||| ||||| ||||||||||| | ||||||||||| | ||||||||||||||  ||||||| ||||    
T  25426136 agataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatcctggagaatttat 25426206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 31671178 - 31671132
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  31671178 agataaaacaaagttaaattgttttcatataagctataagctgtttt 31671132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 377
Target Start/End: Complemental strand, 33787847 - 33787761
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||||||||| |||||| |||| |||||| |||||| |||||| ||||| |||  |||||| |||||||||  | ||||||||||    
T  33787847 ataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaataggctgaaaaca 33787761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 386
Target Start/End: Original strand, 6536597 - 6536678
Alignment:
Q  305 aattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| ||| ||||| ||||||||||||||||| |||||||| ||||||| ||||| ||  ||| |||||| || |||||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaa 6536678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 6909972 - 6909892
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaa 373  Q
    |||| |||||||||||| ||| ||||| ||||||||||||||| ||||  |||  ||||||| ||||| ||| ||||||||    
T  6909972 aaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 24836329 - 24836218
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||| ||||||||||||||| ||   |||||||| ||||| |||||| |||||||||| ||||||   |||||  ||||||||  |||||| ||||||||    
T  24836329 tatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagcttatgga 24836233  T
Q  363 ataaagctgaaaaca 377  Q
    |  |||||| |||||    
T  24836232 aataagctggaaaca 24836218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 4006681 - 4006736
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||| ||||| |||||| |||  |||||||||||||||||||| |||||||||    
T  4006681 gataaaataaagtcaaattgtttttatataagctataagttgttttcataagctat 4006736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 33828621 - 33828668
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||| |||||| ||||||||||| ||||||||||||| |||||||||    
T  33828621 aaagtcaaattgttttcgtataagttataagttgttttaataagctat 33828668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 1401094 - 1401148
Alignment:
Q  308 tgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||| |||||||||||||| |||||| |||||||||  |||||| ||||||||    
T  1401094 tgctttagtataagctataagctgttttcataagctatcatggagagcttatgga 1401148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 1402962 - 1403032
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    |||||||| ||||||||| |  |||| |||||||||||| ||||||| |||||||||  |||||| |||||    
T  1402962 agataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttat 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 4420611 - 4420710
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||| ||| |  ||| ||||||||||  |||| ||||  ||||||||  |||||| |||||||||  ||||||||||||| |||||||||    
T  4420611 agataaaataaagtcaaactatttttgtataagcta--agttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaaca 4420708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 9041513 - 9041467
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    ||||||||||||| ||||||||| |||||| ||||||| ||||||||    
T  9041513 tataagctataagctgtttttattagctatcgtggagagcttatgga 9041467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 13907560 - 13907622
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| || ||||||||||| |||||||||||||| |||||| ||  ||||||| |||||    
T  13907560 aaagttaatttactttcgtataacctataagttgttttcataagccatcttggagaaattatg 13907622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 2735035 - 2735132
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| |||||||||||  ||| |||||| ||||||| |||||| |||||| ||  || | |||||||| ||  |||| |||||||| |||||||    
T  2735035 agataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaa 2735132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 7485163 - 7485118
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagct 343  Q
    |||||||||||  |||| |||||||||||||||||||| |||||||    
T  7485163 aaagttaaatttttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 20671969 - 20671881
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    |||||||| ||||| |||||| ||||||||||||| ||| ||||||| |||| ||||  | |||| ||| |||||  |||||||||||||    
T  20671969 agataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatcatagagagctt-tggaagtaagctgaaaacag 20671881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 281952 - 281864
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||||| ||||| || ||| |||| ||||||||||||| ||| || |||||||||  | |||| || ||||||  ||||||||||||    
T  281952 agataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaaca 281864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 2112167 - 2112222
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| |||||||||||| |||| ||||| |||||||||||||| |||| ||||    
T  2112167 agataaaataaagttaaattg-tttcatataaactataagttgttttcataaactat 2112222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 383
Target Start/End: Original strand, 3155084 - 3155235
Alignment:
Q  231 cttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagtt 330  Q
    ||||||||||||| |||||||| |||| |   |||| ||||| ||| ||| ||||   |||||||||||||| ||| || || | ||||| ||||||| |    
T  3155084 cttatagcataagcgtttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataagct 3155183  T
Q  331 gtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
     |||| ||||| |||  |||||| | |||||||  ||||||||||||| ||||    
T  3155184 attttcataagatatcctggagagc-tatggaaataagctgaaaacagcttat 3155235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 29274333 - 29274261
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgg 361  Q
    |||||||| ||||| |||||| |||| ||||||||||||  |||||| ||||| ||| |||| || |||||||    
T  29274333 agataaaataaagtcaaattgttttcatataagctataaactgttttcataagatattgtggcgagcttatgg 29274261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 31624085 - 31624157
Alignment:
Q  318 taagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||||||||| |||||| ||| |||||  ||||||| ||||| ||  ||| ||||||||| |||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatg 31624157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 31776377 - 31776305
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    |||||| ||||| |||||| ||| ||||||   |||||||||||| |||||||||| |||||| || ||||||    
T  31776377 ataaaataaagtcaaattgtttttgtataattaataagttgttttcataagctataatggagagctaatggaa 31776305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 363
Target Start/End: Complemental strand, 6167445 - 6167313
Alignment:
Q  231 cttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagtt 330  Q
    ||||||||||||||| |||||  ||||| |||  |||| ||  |||||| ||||| | |  ||||| ||||| ||||||||||||| ||||||||||| |    
T  6167445 cttatagcataagtgcttatcgtataagctcaattgaaaaaagtatttcgattacacaaattaaaataaagtgaaattgctttcgtttaagctataagct 6167346  T
Q  331 gtttttataagctatagtggagaacttatggaa 363  Q
    |||||||||||||||  ||||||||||||||||    
T  6167345 gtttttataagctattttggagaacttatggaa 6167313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 26626838 - 26626938
Alignment:
Q  289 agataaaac-aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaac 387  Q
    ||||||||| |||||||||||| |||||||||||||| ||| |||||| |||||||||  || |||||||||| ||  || |||||||||||||||||||    
T  26626838 agataaaacgaaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaac 26626937  T
Q  388 a 388  Q
    |    
T  26626938 a 26626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 375
Target Start/End: Original strand, 11513864 - 11513950
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||||| ||||| |||||| |||| |||||||||||||||||||| |||||||||  |||||||||| |||||  ||||||||||    
T  11513864 agataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaa 11513950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 22681289 - 22681188
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||||  |||||| |||| ||||||||||||| |||||| |||| ||||  | ||||||||||||||  ||||| ||||||| |||||||||    
T  22681289 agataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaaca 22681190  T
Q  389 tg 390  Q
    ||    
T  22681189 tg 22681188  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 1625875 - 1625966
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||  ||||||||||| | ||   |||||||||||  ||||||||||    
T  1625875 aaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacat 1625966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 40279173 - 40279262
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||  ||||||||||||| ||   ||||||||| || |||||||||    
T  40279173 aagttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaaca 40279262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 8017401 - 8017500
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    |||||||||||||||||||  |||| |||||||| |||  |||||| |||||||||  ||||||||||||| ||  | || ||||||| |||||||||||    
T  8017401 gataaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacat 8017500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 32592553 - 32592623
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| || ||||||||| ||| ||||| |||||||||||||||||||||| ||| |||||||||||||    
T  32592553 agataaaataatgttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatg 32592623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 29316879 - 29316778
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| || ||||||||| ||||  |||| ||||||| |||||| || ||||||  ||||||||||||||||  |||||||||| |  |||||||||    
T  29316879 agataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaaca 29316780  T
Q  389 tg 390  Q
    ||    
T  29316779 tg 29316778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 390
Target Start/End: Complemental strand, 33931698 - 33931573
Alignment:
Q  265 tgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaat 364  Q
    |||||||| |||||||||||| | |||||||| || || | |||| ||| |||||||||||||| |||||| |||||||||  ||||||| |  |||||     
T  33931698 tgaataagctatttctattacactagataaaataaggtcagattgtttttgtataagctataagctgttttcataagctattttggagaaatagtggaaa 33931599  T
Q  365 aaagctgaaaacagattatgaacatg 390  Q
     |||||||||  |  |||||||||||    
T  33931598 taagctgaaataaacttatgaacatg 33931573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 35485910 - 35485983
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||||||||||||||||||||||||||||  || ||| | |||||||   |||||||||||| ||||||||||    
T  35485910 tataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacat 35485983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 41851501 - 41851598
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| || |||||||||||| ||| ||||| ||||||||||||||| | |||||||  ||||||| ||||| ||| ||||||| || || |||||||    
T  41851501 agatacaataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaa 41851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 18066103 - 18066163
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    |||||||||||| |||| ||||||||||||| |||||| |||||||||  |||||||||||    
T  18066103 aaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaactta 18066163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 40279268 - 40279332
Alignment:
Q  324 ataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||| |||||||||| ||||||||||||| ||   |||||||||||| |||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 40279338 - 40279402
Alignment:
Q  324 ataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||| |||||||||| ||||||||||||| ||   |||||||||||| |||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 680483 - 680570
Alignment:
Q  303 taaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||||| |||||||||||||||||| | |||| |||||||||  || ||||||| || ||  ||||||||||||| |||| ||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatg 680570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 39073793 - 39073726
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaact 356  Q
    |||||||| || ||||||||| ||| ||||| |||||||||  ||||||||||||||| |||||||||    
T  39073793 agataaaataacgttaaattgtttttgtatatgctataagtaatttttataagctatattggagaact 39073726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 40158706 - 40158785
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||||||||||| |||||||||||| ||||| |||  |||||| |||||| ||| ||||||||||||  |||| ||||||    
T  40158706 tttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatg 40158785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 41407026 - 41407097
Alignment:
Q  274 tatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||||| || | |||||||| ||||||||| |||||| |||||  |||||||||||||| |||||||||    
T  41407026 tatttctataacacaagataaaataaagttaaactgcttttgtatattctataagttgttttcataagctat 41407097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 44439462 - 44439407
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    |||||| ||||||||| || ||| ||||||||||||| ||||||||||||||||||    
T  44439462 ataaaataaagttaaactgtttttgtataagctataaattgtttttataagctata 44439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 12464577 - 12464491
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||||| |||||||||||| ||| ||||| |||||||| | |||| |||||||||  |||||||||| || ||  ||||||||||    
T  12464577 agataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 386
Target Start/End: Original strand, 26201994 - 26202091
Alignment:
Q  288 gagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||||||| || ||||||||| | |||||   ||||||||||||||||||||| |||| ||||||||||||| ||  ||| |||||| || |||||||    
T  26201994 gagataaaataacgttaaattggtctcgtact-gctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaa 26202091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 29628830 - 29628748
Alignment:
Q  306 attgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||| ||| ||||||||||||||||||| | |||||||||  |||| || ||||||||  ||||||||||||  |||||||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaaca 29628748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 43279631 - 43279536
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| || || |||||| ||| ||||  |||||||||||||||||||||||||| |||||||||| || ||  ||| |||||| || |||||||    
T  43279631 agataaaataatgtgaaattgtttttgtat--gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaa 43279536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 3673724 - 3673829
Alignment:
Q  240 taagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttata 339  Q
    ||||||||| ||| |||||| | |||| || |||||||||||| ||   | |||||| |||||||||||| |||| |||||| |||||||| |||| ||     
T  3673724 taagtgtttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcatt 3673823  T
Q  340 agctat 345  Q
    ||||||    
T  3673824 agctat 3673829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 43199359 - 43199436
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||||||||||  ||   |||||||| |||||||||||   |||||||||||||||||||||||| |||| ||||    
T  43199359 ataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcataaactat 43199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 20952348 - 20952392
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  20952348 tatatgctataagttgtttttattagctatattggagaacttatg 20952392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 40279408 - 40279468
Alignment:
Q  324 ataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatg 384  Q
    |||||||||||| |||||||||| ||||||||||||| ||  ||| ||||||||| |||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatg 40279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 43199896 - 43199852
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgttt 334  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||    
T  43199896 gataaaataaagttaaattgtttttgtataagctataagttgttt 43199852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 2416279 - 2416350
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||||  ||||||||||| |||  ||||||||||||| |||||||||||| ||||   |||||||||||    
T  2416279 agataaaatgaagttaaattgttttgatataagctataagctgtttttataagttatataagagaacttatg 2416350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 362
Target Start/End: Original strand, 10143096 - 10143211
Alignment:
Q  247 ttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    ||||| ||||||| | |||| ||||||||||||||| ||   ||||||||  |||| ||| || |||  ||||||||||||||| |||| |||||||||     
T  10143096 ttatcgaataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatc 10143195  T
Q  347 gtggagaacttatgga 362  Q
     ||||||  |||||||    
T  10143196 atggagagtttatgga 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 378
Target Start/End: Complemental strand, 18962199 - 18962052
Alignment:
Q  232 ttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttg 331  Q
    |||||||| | ||||||||||  ||||| | |||| || || ||||| ||| ||   |||||||| ||||||||| || |||| ||||||||||||  |     
T  18962199 ttatagcacaggtgtttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaacta 18962100  T
Q  332 tttttataagctatagtggagaacttatgg-aataaagctgaaaacag 378  Q
    |||| |||||||||  ||||||   ||||| |||||||||||||||||    
T  18962099 ttttcataagctatcatggagagactatggaaataaagctgaaaacag 18962052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 20933721 - 20933792
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| || ||||||||||||   |||| ||| |||||||||||| ||||||||| |||| ||||||||    
T  20933721 agataaaataatgttaaattgcttctatatatgctctaagttgtttttctaagctatattggaaaacttatg 20933792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 388
Target Start/End: Complemental strand, 28039464 - 28039337
Alignment:
Q  261 catatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||||||| |||||   |||| | |||||||| |||||  ||||| |||| ||||| |||||||   |||| ||||||| |  |||| || |||||    
T  28039464 catatgaataagctattttggttacacaagataaaataaagtccaattgttttcatataaactataagcaattttcataagctttcttggaaaagttatg 28039365  T
Q  361 gaataaagctgaaaacagattatgaaca 388  Q
    |||  ||||||||||||| |||||||||    
T  28039364 gaaataagctgaaaacagcttatgaaca 28039337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 33941876 - 33941931
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||||||||| |||||| ||| ||||||| ||||| ||||||| |||||||||    
T  33941876 gataaaacaaagtaaaattgtttttgtataagttataacttgttttcataagctat 33941931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Complemental strand, 36114627 - 36114580
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgttttt 336  Q
    |||||||| |||||||||||| ||| |||||||| |||||||||||||    
T  36114627 agataaaataaagttaaattgtttttgtataagcaataagttgttttt 36114580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 42907304 - 42907371
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    ||||| ||||||||| ||   ||| |||| |||||||||||| |||||| ||||||||||||||||||    
T  42907304 ataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgtttt 42907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 4090289 - 4090371
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||||| |||||| || || | |||||||| ||||| |||||| ||  |||||| |||||||||||||  |||||||||    
T  4090289 tatgaataagctatttccataacacaagataaaataaagtcaaattgtttcggtataatctataagttgtttacataagctat 4090371  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 9750916 - 9750958
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  9750916 aaaataaagttaaattgttttcttataagctataagttgtttt 9750958  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 15757762 - 15757676
Alignment:
Q  290 gataaaacaaagttaaattgctttc-gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||| |||||||||||| |||  ||||| |||||||||||| |||||||||||||   |||||| |||| ||  ||||||||||    
T  15757762 gataaaataaagttaaattgttttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaa 15757676  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 28206233 - 28206303
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    ||||||||| | ||||||||  |||  |||| | ||||| |||||||||||||||||| ||||||||||||    
T  28206233 agataaaacgatgttaaattatttttttatatgttataaattgtttttataagctatattggagaacttat 28206303  T

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Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 362
Target Start/End: Complemental strand, 28803667 - 28803537
Alignment:
Q  232 ttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttg 331  Q
    |||| |||||| || |||||| |||||| | |||  |||||||||||| || ||   |||||||| ||||| ||| || |||| ||||||||| ||||||    
T  28803667 ttatggcataaatgcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttg 28803568  T
Q  332 tttttataagctatagtggagaacttatgga 362  Q
    ||||  ||| ||||  |||||| ||||||||    
T  28803567 ttttcttaaactatcctggagagcttatgga 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 43985085 - 43985007
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||||||||  ||||||||||||| |||||||||  || ||| |||||| ||  |||||||||| |||| ||||||||    
T  43985085 tttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatagataatgaacat 43985007  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 43173189 - 43173262
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    ||||||| ||||| |||||  |||| |||||||||||  ||||||||||| |||||  |||||| |||||||||    
T  43173189 gataaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaa 43173262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 44438943 - 44438842
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||| ||| || ||| ||| |||| ||||| ||| || ||||| |||  |||||| ||| |||||  ||||||||||||| |||||||||    
T  44438943 agataaaataaagtcaaactgtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaaca 44438844  T
Q  389 tg 390  Q
    ||    
T  44438843 tg 44438842  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 750648 - 750735
Alignment:
Q  300 agttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||||| || || |||||||||||| || |||||  |||||||||  ||||||||||||| ||  ||||| ||||||| |||||||||    
T  750648 agttaaactgtttacgtataagctatgagctgtttc-ataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaaca 750735  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 25609762 - 25609810
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgttttta 337  Q
    |||||||| ||||| || ||  |||||||||||||||||||||||||||    
T  25609762 agataaaataaagtcaatttattttcgtataagctataagttgttttta 25609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 388
Target Start/End: Original strand, 36043881 - 36043969
Alignment:
Q  300 agttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||| |||||||||||||||||  ||| || || || |||  |||||| |||||| |||  |||| ||||||| |||||||||    
T  36043881 agttaaattgttttcgtataagctataaactgtcttcattagttatcttggagagcttatgaaattgagctaaaaacagcttatgaaca 36043969  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 37986759 - 37986823
Alignment:
Q  48 ggacacgaca-tgacacgtcgacacggataactatttgaaaaaacgatataattgaatgtaatca 111  Q
    |||||||||| ||||||| |||||| |||||  ||||||||||| |||||| |||| ||||||||    
T  37986759 ggacacgacactgacacgccgacacagataataatttgaaaaaatgatatatttgagtgtaatca 37986823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 43985184 - 43985276
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||||||||||| | | || |||||||||| |||||||| |||||||  ||| ||| |||||||||  ||| |||||| || ||||| |||||    
T  43985184 aaagttaaattgttatagtgtaagctataatttgtttttgtaagctaccgtgaagagcttatggaaacaagttgaaaaaagcttatggacatg 43985276  T

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Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 390
Target Start/End: Original strand, 42582808 - 42582979
Alignment:
Q  220 ttaatttgcaacttatagcataagtgtttatca-aataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtat 318  Q
    |||| ||||| ||||||||||||| |||||||| ||||||  | |||| ||||| |||||| || |    |||| ||| ||||||||||||  ||||| |    
T  42582808 ttaacttgcagcttatagcataagcgtttatcataataagcgcttatgtataagctatttccatgataaaagatgaaataaagttaaattgtgttcgttt 42582907  T
Q  319 aagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||| |||||| ||||||| ||||||||| ||||||||||||| ||  ||||| ||||||| |||||||||||    
T  42582908 aaggtataagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttatgaacatg 42582979  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 6587195 - 6587113
Alignment:
Q  305 aattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaac 387  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || ||  |||||| |||||| ||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaac 6587113  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 16937987 - 16937890
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| || ||||||||| ||| ||||| ||||||||||||||||||| |||||| ||||||||||| | ||  |||||||||| || |||||||    
T  16937987 agataaaataacgttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaa 16937890  T

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Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 12425537 - 12425625
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||| | |||||||  ||||||||||||| ||  ||| ||||||||    
T  12425537 agataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaaca 12425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 9202919 - 9202753
Alignment:
Q  223 atttgcaacttatagcataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataag 321  Q
    ||||||| ||||||||| ||||||||||||  |||||| | |||  ||||| ||||||| |  |   |||||||| |||||||||||| |||| ||||||    
T  9202919 atttgcagcttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataag 9202820  T
Q  322 ctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    | ||||| |||||| ||||| |||  || |||||||||| ||  |||||| |||||| |||||||||    
T  9202819 caataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaaca 9202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 388
Target Start/End: Original strand, 39105363 - 39105529
Alignment:
Q  223 atttgcaacttatagcataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataag 321  Q
    ||||||| ||||||||||||||| ||||||  |||||  | |||| ||||| |||||||||  |   | || |||  ||||||||||| |||||||||||    
T  39105363 atttgcagcttatagcataagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataag 39105462  T
Q  322 ctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||||  |||||| |||||||||  ||||||||||||| ||  ||||| |||| || |||||||||    
T  39105463 ctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaaca 39105529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 378
Target Start/End: Complemental strand, 912779 - 912662
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaa-ttgctttcgtataagctataagttgtttttataagctatagtggagaacttatgg 361  Q
    |||||||||||||||||||| || | | |||||| ||||| ||| ||| |||| ||||||| ||||||||||||||||| ||||  |||| | |||||||    
T  912779 tatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttgtttttataaactatcttggaaagcttatgg 912680  T
Q  362 aata-aagctgaaaacag 378  Q
    || | |||||||||||||    
T  912679 aaaataagctgaaaacag 912662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 2568608 - 2568680
Alignment:
Q  274 tatttctattacgcgagataaaacaaagttaaattgcttt-cgtataagctataagttgtttttataagctat 345  Q
    ||||||||| ||  || ||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  2568608 tatttctataacaagatataaaacaaagttaaattgtttttcgtataagctataagttgttttcataagctat 2568680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 37588442 - 37588364
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    |||| |||||||||||||||||||| ||||| |||  |||||| |||||||||  ||||||||||||| |||| |||||    
T  37588442 tttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacat 37588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 377
Target Start/End: Complemental strand, 1465203 - 1465036
Alignment:
Q  209 ggataaacagattaatttgcaacttatagcataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaat 307  Q
    |||||||||||||| || |||  |||||||||||||| ||||||| |||||  | |||| ||||| |||||||||  |    ||||||| ||||||||||    
T  1465203 ggataaacagatta-ttcgcagtttatagcataagtgcttatcaagataagcgcttatgtataagctatttctatagcataggataaaataaagttaaat 1465105  T
Q  308 tgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
     ||||| || |||||||||||||  |||||||||||||  ||||| |||| || ||  ||||||||||||    
T  1465104 cgcttttgtgtaagctataagtt-attttataagctatcttggaggacttgtgaaaataagctgaaaaca 1465036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 10272535 - 10272447
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    ||||||||  |||| |||||| ||||||||||||||||||||||||| |||||| ||  ||||||  ||||| ||  ||||||||||||    
T  10272535 agataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaaca 10272447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 37526281 - 37526202
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||| |||||||||||||||||||| ||||| | |  |||||| |||||||||  ||||||||||||| |||| ||||||    
T  37526281 tttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatg 37526202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 390
Target Start/End: Original strand, 42583089 - 42583216
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||| ||||| ||||||||| ||   |||| ||| |||||||||||| |||||| ||||  ||||| |||||| ||||  ||| |||||||||||||| |    
T  42583089 tatgtataaggtatttctataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaa 42583188  T
Q  363 ataaagctgaaaacagattatgaacatg 390  Q
       ||||||||||||| |||| ||||||    
T  42583189 tgtaagctgaaaacagtttataaacatg 42583216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 390
Target Start/End: Complemental strand, 15074822 - 15074752
Alignment:
Q  320 agctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||||||||||||||| ||||| |||| |||| | |||||||||  ||||||||||||| ||||| |||||    
T  15074822 agctataagttgttttcataagttatactggaaagcttatggaaataagctgaaaacagcttatggacatg 15074752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 25461739 - 25461681
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    ||||||||| ||| ||||| | ||||||||||||||||||||| || ||||||||||||    
T  25461739 gttaaattggtttagtatatgttataagttgtttttataagctctattggagaacttat 25461681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 32009684 - 32009729
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||||    
T  32009684 gtatatgctataaattgtttttataagctatattggagaacttatg 32009729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 40205142 - 40205077
Alignment:
Q  325 taagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||||||||| |||||||||  |||||| ||||| |||  ||||||||||||||||||| |||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatg 40205077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 4014493 - 4014429
Alignment:
Q  324 ataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||| |||||| |||||||||  ||||||||||||| ||  ||||||||||||| |||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 12554494 - 12554542
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    |||||||||||| ||| ||||| |||||||||||||||||||| |||||    
T  12554494 aaagttaaattgtttttgtatatgctataagttgtttttataacctata 12554542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 386
Target Start/End: Complemental strand, 16458070 - 16457986
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| ||| ||||| |||||||||||||||||| ||||| | |||||||||| || ||  || ||||||| || |||||||    
T  16458070 ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaa 16457986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 366
Target Start/End: Original strand, 17652236 - 17652304
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataa 366  Q
    |||||||||||||||| |||||  |||||||||||||| |||||||||  || | |||||||| |||||    
T  17652236 aaagttaaattgcttttgtatatactataagttgttttcataagctatgttgaacaacttatgaaataa 17652304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 37690719 - 37690639
Alignment:
Q  311 tttcgtataagctataagttgtttttataa-gctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||| |||||||||||||||||||| |||| | |||  |||||| |||||||||  ||||||||||||| |||| ||||||    
T  37690719 tttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagcttattaacatg 37690639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 7907873 - 7907944
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||||| ||||||||||||| ||||||| |  |||||| |||||| ||| ||||||||||||  |||||||    
T  7907873 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 11700137 - 11700200
Alignment:
Q  298 aaagttaaattgctttcgtataagct-ataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||  ||| ||||||||||||| |||||||||||| ||| ||||| ||||||||||||||    
T  11700137 aaagttatgttgttttcgtataagcttataagttgttttgatatgctatcgtggagaacttatg 11700200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 366
Target Start/End: Original strand, 12975315 - 12975390
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataa 366  Q
    |||||| ||| | |||||| |||| ||||||||||||| ||| || |||||||||  |||||| ||||||||||||    
T  12975315 ataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttatggaataa 12975390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 34102418 - 34102351
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaact 356  Q
    |||||||| || ||||| ||| ||| ||||| |||||||||||||||||||||| ||  |||||||||    
T  34102418 agataaaataatgttaatttgtttttgtatatgctataagttgtttttataagccatgttggagaact 34102351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 13244586 - 13244532
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagct 343  Q
    ||||| |||||||| || ||| |||||||||| |||||||||||||| |||||||    
T  13244586 agatataacaaagtcaacttgttttcgtataaactataagttgttttcataagct 13244532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 14295472 - 14295566
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    |||||||| ||||| ||| || |||| ||||||||||||| ||||||  ||||||||  |||||| ||| | |||  ||||||||||||| ||||    
T  14295472 agataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttat 14295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 15309075 - 15308997
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    |||| |||||||||||||||||||| || ||||||  | |||| |||||| ||  ||| ||||||||| ||||||||||    
T  15309075 tttcttataagctataagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaacat 15308997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 2880624 - 2880551
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||| ||||||||||||||||||||||||   | |||  ||||||||  ||||||||||||  ||||||||||    
T  2880624 tataatctataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacat 2880551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 359
Target Start/End: Original strand, 7319381 - 7319442
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    |||||||||||| |||| ||||||||||||  ||||||  ||||||||  ||||||||||||    
T  7319381 aaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttat 7319442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 7674614 - 7674715
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||| |||||||| |||| ||||||| ||||  |||||| |||||||||  ||||||| || || ||  ||||||||||||  |||| ||||    
T  7674614 agataaaataaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaaca 7674713  T
Q  389 tg 390  Q
    ||    
T  7674714 tg 7674715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 7984965 - 7985034
Alignment:
Q  319 aagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||| | |||| |||||||||  ||||||| ||||| ||  ||||||||||||| |||||||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 18543273 - 18543213
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||| ||||||||||||| |||||||||  |||||| |||||| ||| ||||||||||||    
T  18543273 tataagatataagttgttttcataagctatcctggagagcttatgaaat-aagctgaaaaca 18543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 19138808 - 19138720
Alignment:
Q  304 aaattgctttcgtataagctataagttgtttttataagctat--agtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||||| ||||  ||||||||||||||||||| |||||||||    |||||| |||||||||  ||||||||||||  ||||| |||||    
T  19138808 aaattgttttcagataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaacaatttatgtacatg 19138720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 27298066 - 27298107
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaactt 357  Q
    |||| ||||||||||||||||||||| |||| ||||||||||    
T  27298066 tatatgctataagttgtttttataagatatattggagaactt 27298107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 34245717 - 34245746
Alignment:
Q  316 tataagctataagttgtttttataagctat 345  Q
    ||||||||||||||||||||||||||||||    
T  34245717 tataagctataagttgtttttataagctat 34245746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 36227773 - 36227838
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataa 366  Q
    ||||||||| ||| |||||   ||||||||| |||||||||||||| || |||||||||| |||||    
T  36227773 gttaaattgattttgtatacaatataagttgcttttataagctatattgaagaacttatgaaataa 36227838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 37611279 - 37611218
Alignment:
Q  329 ttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||||| |||||||||  |||||| |||||||||  || |||||||||| |||||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatg 37611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 37788009 - 37787948
Alignment:
Q  329 ttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||||| |||||||||  |||||| |||||||||  || |||||||||| |||||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatg 37787948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 42181196 - 42181151
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgttt 334  Q
    |||||||||||||| |||| | |||| |||||||||||||||||||    
T  42181196 agataaaacaaagtcaaatggttttcatataagctataagttgttt 42181151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 2703524 - 2703468
Alignment:
Q  67 gacacggataactatttgaaaaaacgatataattgaatgtaatcaaatatgtgagtg 123  Q
    ||||| |||||  ||||||||||| || | ||||||||||||||| |||||||||||    
T  2703524 gacaccgataagcatttgaaaaaatgacacaattgaatgtaatcatatatgtgagtg 2703468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 14932256 - 14932307
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataag 341  Q
    |||||||| |||||||||||| ||| |||||||||||||| |||| |||||||    
T  14932256 agataaaataaagttaaattgtttt-gtataagctataagctgttgttataag 14932307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 17368675 - 17368743
Alignment:
Q  322 ctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||||||||||||| |||||||||  ||||||  ||||||||  ||||||||||| |  ||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatg 17368743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 36539712 - 36539764
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataag 341  Q
    |||||||| ||||| ||  || |||| ||||||||||||||||||||||||||    
T  36539712 agataaaataaagtcaacctgttttcatataagctataagttgtttttataag 36539764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 42573874 - 42573822
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||| |||||| || || ||||||||| |||||||| ||||||||||||||||    
T  42573874 aaaaaaaagttcaactgttttcgtataggctataagctgtttttataagctat 42573822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 43300877 - 43300929
Alignment:
Q  322 ctataagttgtttttataagctatagtggagaacttatggaataaagctgaaa 374  Q
    ||||||||||||||| ||||||||  ||||||||||||| ||  |||||||||    
T  43300877 ctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaa 43300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 42121424 - 42121554
Alignment:
Q  260 tcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttc-gtataagctataagttgtttttataagctatagtggagaactta 358  Q
    ||||||||||||| |||||||||||| | |||||||| ||| | |||||  |||| ||||||||||||||||||||| || ||||||  ||||||||||     
T  42121424 tcatatgaataagctatttctattacactagataaaataaaataaaatttgtttctgtataagctataagttgttttcatgagctatcttggagaacttg 42121523  T
Q  359 tggaataaagctgaaaacagattatgaacatg 390  Q
    |||||  |||||| |||||| |||||||||||    
T  42121524 tggaaataagctg-aaacagcttatgaacatg 42121554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 389
Target Start/End: Original strand, 17884034 - 17884134
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| |||||||||||| ||| ||||||| ||| ||||||||| |||||||||| |||||| |||||| ||   |||||||||||  |||||||||    
T  17884034 agataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaaca 17884133  T
Q  389 t 389  Q
    |    
T  17884134 t 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 27043933 - 27043863
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||  |||||||| ||||    
T  27043933 gataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatg 27043863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 47119069 - 47118981
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| || ||| |||||  || |||||||||| |   ||||||||||||    
T  47119069 agataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaaaaca 47118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 9760406 - 9760477
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| |||||||||||  |||   ||| |||||||||||||||||||||||||| |||||||||||||    
T  9760406 agataaaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatg 9760477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 47946143 - 47946210
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    ||||||||||||||| |||  ||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  47946143 ataagttatttctataacgtaagataaaatgaagttaaattgttttcgtataagctataaattgtttt 47946210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 50681193 - 50681122
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| || ||||||||| ||| ||||| |||||||||||||| ||||||||||| ||||||| |||||    
T  50681193 agataaaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatg 50681122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 44797852 - 44797922
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    ||||||||||| ||||||||| ||| || || ||||||||||||||||||||||| || |||||| |||||    
T  44797852 agataaaacaacgttaaattgattttgtgtacgctataagttgtttttataagctgtattggagagcttat 44797922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 383
Target Start/End: Complemental strand, 50800120 - 50800040
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    ||||||||||||| ||||||||||||| ||||||  ||||||||  |||||||||| |||||  ||||||||||||| ||||    
T  50800120 ttaaattgctttcttataagctataagctgttttcttaagctatcatggagaactt-tggaaataagctgaaaacagcttat 50800040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 53294205 - 53294132
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||||| ||| ||||| |||||||||||||||||||| ||||| | ||||||||||| ||  ||||||||||    
T  53294205 ttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaa 53294132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 25885825 - 25885877
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataag 341  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||| |||||    
T  25885825 agataaaataaagttaaattgttttcgtgtaagctataagttgttttcataag 25885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 13949948 - 13949893
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagcta 344  Q
    |||||||| ||||| |||||| |||| ||||||||||||||||||| |||||||||    
T  13949948 agataaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 29263337 - 29263436
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||||| ||||||| |||| ||||  |||||| |||||||||||| |||||||||  || ||| ||| |||||  ||||||||||||  ||||||||||    
T  29263337 gataaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacat 29263436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 30024609 - 30024704
Alignment:
Q  232 ttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataa 327  Q
    |||||| | ||| |||||||| |||||| | |||| ||||||||||||||| ||   |||||||| ||||| |||||| |||| ||||||||||||    
T  30024609 ttatagtagaagcgtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 389
Target Start/End: Complemental strand, 30066861 - 30066770
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||||| |||| |||||||||| || |||| |||| | |||||||||  |||||| |||||  ||  ||||||||||||||||||||||||    
T  30066861 aaagttacattgttttcgtataaactgtaagctgttctcataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacat 30066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 375
Target Start/End: Original strand, 44138525 - 44138611
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||||| ||||||||||||||||||||||  || ||| ||||||| |||| | ||  ||||||||||||| ||  ||||||||||    
T  44138525 agataaaataaagttaaattgctttcgtatagcctgtaatttgttttcataaaccatgttggagaacttatgaaaataagctgaaaa 44138611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 21731728 - 21731663
Alignment:
Q  321 gctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||  ||| |||||| || |||||||    
T  21731728 gctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaa 21731663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 24929459 - 24929560
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| |||||  || || |||| || ||||||||||||||||| |||| || || | |||| |||||||||  ||||||||||||  |||||||||    
T  24929459 agataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaaca 24929558  T
Q  389 tg 390  Q
    ||    
T  24929559 tg 24929560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 26520414 - 26520277
Alignment:
Q  209 ggataaacagattaatttgcaacttatagcataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaat 307  Q
    |||||||||  |||||||||  ||| ||||||||||||||||||  |||||  | |||| ||||  | ||||||| ||   |||| ||| ||||||||||    
T  26520414 ggataaacaacttaatttgctgcttctagcataagtgtttatcatgataagcacttatgtataaactgtttctataacaaaagatgaaataaagttaaat 26520315  T
Q  308 tgctttcgtataagctataagttgtttttataagctat 345  Q
    || |||||| ||||||||||| | |||||||| |||||    
T  26520314 tgttttcgtgtaagctataagctatttttatatgctat 26520277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 39691247 - 39691178
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    |||||||| || |||||| |  ||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  39691247 agataaaataatgttaaaattgttttgtatatgctataagttgtttttataagctatattgaagaactta 39691178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 54069521 - 54069424
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| || ||||||||| ||| ||||| ||||||| ||||||||||||| |||| || ||||| |||| ||  ||| | ||||||| |||||||    
T  54069521 agataaaataatgttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagcttatgaa 54069424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 51630077 - 51630165
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||||| |||||||||||| |||  ||||||||||||| | |||| |||||||||  || |||| ||||| ||  ||||||||||||    
T  51630077 agataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 3155569 - 3155668
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| |||||||||||| ||| ||| |||||| ||| |||||| |||| ||||  || |||||| ||| ||  ||||||||||||| ||| |||||    
T  3155569 agataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataagctgaaaacagtttacgaaca 3155668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 7694088 - 7694013
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||||||||||||| |||||| ||||| |||  ||||||  ||||||||  ||||||||||||  |||||||||||    
T  7694088 gtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatg 7694013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 386
Target Start/End: Complemental strand, 17822959 - 17822872
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||||||||| | |  |||| ||||||||||||||| |||||||||  ||||||||||||| ||  ||||| |||| || |||||||    
T  17822959 aagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaa 17822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 377
Target Start/End: Original strand, 26883882 - 26884049
Alignment:
Q  211 ataaacagattaatttgcaacttatagcataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattg 309  Q
    |||||||  |||||||||| | ||||||||||| | |||||   ||||||   |||| ||||||||||||| | |   |||||||||  |||||||||||    
T  26883882 ataaacaacttaatttgcagcatatagcataagcgcttatcttgataagtgattatgtataagttatttctctaagaagagataaaatgaagttaaattg 26883981  T
Q  310 ctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
     |||| |||||||||||||| |||||  ||| || || |||||||| |||| ||  || |||||||||    
T  26883982 ttttcatataagctataagtcgttttcgtaaactttattggagaacctatgaaaataaactgaaaaca 26884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 388
Target Start/End: Complemental strand, 31038971 - 31038872
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||| |||||| |||| |||||| ||||||   |||||||||||| || | |||||||||| |||  ||| ||||||||  |||||||||    
T  31038971 agataaaataaagtcaaattgttttcatataagttataagccatttttataagctctaatagagaacttatagaaataagttgaaaacaacttatgaaca 31038872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 40174538 - 40174597
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactt 357  Q
    |||||||||||| |||| || |||||||||| |||||| |||||||| | ||||||||||    
T  40174538 aaagttaaattgttttcataaaagctataagctgttttcataagctacattggagaactt 40174597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 44638268 - 44638221
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||||||| | ||| ||||||||||||||||||| ||||||||||    
T  44638268 aaagttaaattacattcatataagctataagttgtttgtataagctat 44638221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 4071848 - 4071906
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatag 347  Q
    |||||||| ||||| |||||  |||| |||||||||||||||||| | |||||||||||    
T  4071848 agataaaataaagtcaaattattttcatataagctataagttgttatgataagctatag 4071906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 383
Target Start/End: Original strand, 6364063 - 6364209
Alignment:
Q  238 cataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgttttt 336  Q
    |||||||| ||||||| |||||  | |||| ||||| ||||||||| ||   |||||||| ||||| |||||   |||  ||||||||||||   ||||     
T  6364063 cataagtgcttatcaagataagcacttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttc 6364162  T
Q  337 ataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    |||||||||| ||||||||||| | ||  ||||||||||||| ||||    
T  6364163 ataagctataatggagaacttacgaaaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 389
Target Start/End: Complemental strand, 6466176 - 6466050
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||||||| ||| ||| || | |||| ||| ||||| |||||  ||| |||||| |||||||||||||  |||||||||  | ||||  |||||||    
T  6466176 tatgaataagttgtttatataacacaagatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattatgga 6466077  T
Q  363 ataaagctgaaaacagattatgaacat 389  Q
    |  ||| |||||| || ||||||||||    
T  6466076 aataagttgaaaatagcttatgaacat 6466050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 35571725 - 35571679
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||| |||| |||||||||||||||||| |||||| |||||||||    
T  35571725 aagttatattgttttcgtataagctataagctgttttcataagctat 35571679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 366
Target Start/End: Complemental strand, 40831098 - 40831056
Alignment:
Q  324 ataagttgtttttataagctatagtggagaacttatggaataa 366  Q
    ||||||||||||||||||||| | ||||||||||||| |||||    
T  40831098 ataagttgtttttataagctagattggagaacttatgaaataa 40831056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 42685390 - 42685456
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaac 355  Q
    ||||||||  ||||||||||| |||  |||||||| ||||||||||| |||||||||  ||||||||    
T  42685390 agataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttggagaac 42685456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 6987845 - 6987744
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||||| ||| || |||||||| | |||| |||| ||||| || |||||  |||||| |||||||||  ||| |||||| || ||||| |||    
T  6987845 agataaaacaaagtcaaactgttttcgtattaactattagttatttttttacgctatcctggagagcttatggaaataagttgaaaatagtttatggaca 6987746  T
Q  389 tg 390  Q
    ||    
T  6987745 tg 6987744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 28615302 - 28615371
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||| ||||| ||| |||||||| |  |||||||||||||||| |||||||||| || ||| ||||||    
T  28615302 ataaaaaaaagtgaaactgctttcgaaagagctataagttgttttcataagctataatgaagagcttatg 28615371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 35405940 - 35406013
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||| ||||| |||||||| | ||| |||  |||||| |||||||||  ||||||||||||| ||||||||||    
T  35405940 tataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaacagcttatgaacat 35406013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 49219084 - 49219161
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||||||||||| ||   | |||||| ||||| |||||  |||| |||||||||||||||||||| |||| ||||    
T  49219084 ataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactat 49219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 52746944 - 52746843
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| |||||||||||| ||| || ||||| ||||| |||||| |||||||||  || |   |||||| ||   |||||||||||| |||||||||    
T  52746944 agataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaaca 52746845  T
Q  389 tg 390  Q
    ||    
T  52746844 tg 52746843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 54426043 - 54426080
Alignment:
Q  323 tataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  54426043 tataagttgtttttataatctatattggagaacttatg 54426080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 437536 - 437480
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| ||||||||||||  ||| |||||| | ||||||||||| |||||||||    
T  437536 agataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctat 437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 2244047 - 2244114
Alignment:
Q  321 gctataagttgtttt--tataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||||||||  ||||||||||| ||||||||||||| ||  ||| |||||| || |||||||    
T  2244047 gctataagttgttttaatataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaa 2244114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 7601726 - 7601794
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    ||||||| |||||||||||| ||| ||||| | ||| ||| |||||||||| ||||| | |||||||||    
T  7601726 gataaaataaagttaaattgtttttgtatatgttatgagtagtttttataaactatattagagaactta 7601794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 11802528 - 11802595
Alignment:
Q  317 ataagctataagttgtttttataagctatagtggagaacttatg-gaataaagctgaaaacagattatg 384  Q
    |||||||| |||||||||| |||||||||  |||||| |||||| |||||| ||||||||||| |||||    
T  11802528 ataagctacaagttgttttcataagctattatggagagcttatgagaataa-gctgaaaacagcttatg 11802595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 24444026 - 24444066
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtgga 351  Q
    |||| |||||||||||||||||||| ||||||||| |||||    
T  24444026 tttcatataagctataagttgttttcataagctattgtgga 24444066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 389
Target Start/End: Complemental strand, 54325156 - 54325041
Alignment:
Q  274 tatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga-ataaagctga 372  Q
    ||||||||||||   |||||||| ||||| ||| || |||| ||||||||||||| | |||| | |||||||  ||||||  ||||||| ||||| ||||    
T  54325156 tatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaa-ctga 54325058  T
Q  373 aaacagattatgaacat 389  Q
    |||||| ||||| ||||    
T  54325057 aaacagcttatggacat 54325041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 390
Target Start/End: Original strand, 12110300 - 12110427
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||||  |||||||||||| | |||||||| ||||| |||||| ||| |||||||||||||| |||||| |||||||||  || |||||||||| |    
T  12110300 tatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaa 12110399  T
Q  363 ataaagctgaaaacagattatgaacatg 390  Q
    |  || || ||||||| || ||||||||    
T  12110400 aataatctaaaaacagtttgtgaacatg 12110427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 38010680 - 38010781
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||||  |||||| |||| ||||||||||||| |||||| |||| ||||  | ||||||||||||||  ||||| ||||||| |||||||||    
T  38010680 agataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaaca 38010779  T
Q  389 tg 390  Q
    ||    
T  38010780 tg 38010781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 8094239 - 8094337
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||| |||||||||||| ||| |||||||||||||||| ||||  | ||||||| |||||| |||||||||  ||| | ||||||| | |||||||||    
T  8094239 taaaataaagttaaattggtttggtataagctataagttattttcttgagctatattggagagcttatggaagtaagataaaaacagctaatgaacatg 8094337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 46280363 - 46280305
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| ||| ||||| |||||||| ||||||||||||||||| |||||||||||||    
T  46280363 ttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatg 46280305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 388
Target Start/End: Original strand, 28165031 - 28165156
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||| ||||||| ||||||| ||   ||||||||  |||| |||||| |||  ||||||||||||  ||| ||||||||||||  |||||| ||||||||    
T  28165031 tatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatgga 28165130  T
Q  363 ataaagctgaaaacagattatgaaca 388  Q
    |  ||| ||||||||| |||||||||    
T  28165131 aataagttgaaaacagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 40689090 - 40688993
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| |||||||||||  |||| ||||||||||||| ||| || |||||||||  |||| |||||||| ||  ||||| ||||||| |||||||    
T  40689090 agataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatgaa 40688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 48157224 - 48157123
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||| |||||| |||  |||||||||||| ||||||| | |||||||   ||||| |||||||||  ||||||||||||| ||||| |||    
T  48157224 agataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggaca 48157125  T
Q  389 tg 390  Q
    ||    
T  48157124 tg 48157123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 19022657 - 19022618
Alignment:
Q  321 gctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  19022657 gctataagttgtttttataagctatattggagaacttatg 19022618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 30180017 - 30180064
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgttttt 336  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||    
T  30180017 agataaaataaagttaaattgttttcgtataagctataagctgttttt 30180064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 39967886 - 39967985
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||| |||||||| |||||||  |||||||||||||||| |||||||||    ||||||| ||| ||  ||| ||||||||| |||||||||    
T  39967886 agataaaataaacttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaaca 39967985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 45790502 - 45790443
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||||||||||||||||||||| ||||| |||| |||||||| ||  ||||||||||    
T  45790502 tataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 47177606 - 47177673
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||||||||||||| |||| ||||||||||||| |||||| | |||||||  ||||||| |||||    
T  47177606 aaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatg 47177673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 20881740 - 20881654
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||||| ||||||||||| || |||| ||||||||||||||||| |||| ||||  |  |||||||||| ||  ||||||||||    
T  20881740 agataaaacgaagttaaattgtttccgtacaagctataagttgttttcataaactatcttaaagaacttatgaaaataagctgaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 383
Target Start/End: Complemental strand, 22283848 - 22283754
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    |||||||| |||||||||||| ||| |||| ||||||||  |||||| |||| | ||  | ||||||||||||||  ||||||||||||| ||||    
T  22283848 agataaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttat 22283754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 21568559 - 21568502
Alignment:
Q  329 ttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||||||||||| ||||||||||||||||  ||| |||||| || |||||||    
T  21568559 ttgtttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaa 21568502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 25130294 - 25130261
Alignment:
Q  209 ggataaacagattaatttgcaacttatagcataa 242  Q
    ||||||||||||||||||||||||||||||||||    
T  25130294 ggataaacagattaatttgcaacttatagcataa 25130261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 20527011 - 20526947
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||| |||||| ||| |||||| ||||||||||||| |||||||||| ||  ||||||||||    
T  20527011 tttcgtaaaagctacaagctgttttcataagctatagtgtagaacttatgaaaataagctgaaaa 20526947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 363
Target Start/End: Complemental strand, 27481456 - 27481324
Alignment:
Q  231 cttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagtt 330  Q
    |||||||||||| ||||||| | ||||||   |||| ||||| ||||||||| ||    |||||||| |||| ||| || || | |||||||||||||||    
T  27481456 cttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T
Q  331 gtttttataagctatagtggagaacttatggaa 363  Q
     |||| |||||||||  |||| | |||||||||    
T  27481356 attttcataagctatcatggatagcttatggaa 27481324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 28613638 - 28613594
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtt 333  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||    
T  28613638 agataaaacaaagttaaattgtttttgtataagttataagttgtt 28613594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 420326 - 420397
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| || ||| ||||| ||| ||||| ||||||||||||||   ||||||||| |||||||||||||    
T  420326 agataaaataatgttcaattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatg 420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 1417230 - 1417285
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagcta 344  Q
    |||||||| ||||| |||||| |||| ||||||| |||||||||||| ||||||||    
T  1417230 agataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 20269542 - 20269613
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||||||||||||||||| ||| ||| | | |||||||||||||  |||||| || ||||||| |||||    
T  20269542 agataaaacaaagttaaattgtttttgtaaatgttataagttgttttactaagctgtattggagaatttatg 20269613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 30812129 - 30812188
Alignment:
Q  304 aaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    |||||| |||||||||||||||||| |||||| || ||||||  |||||| |||||||||    
T  30812129 aaattgttttcgtataagctataagctgttttcattagctatcatggagagcttatggaa 30812188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 33601511 - 33601417
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||| |||||||||||  ||| ||||  ||||||||||||||| |||||||||  | ||||||||||| | | |||||||||| || |||||||    
T  33601511 ataaaataaagttaaattatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 33601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 377
Target Start/End: Original strand, 44821934 - 44822013
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    ||||| |||||| ||| ||||||| |||||| |||||| |||||||||  ||||||||||||| ||  ||| ||||||||    
T  44821934 aaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaaca 44822013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 24909639 - 24909717
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaac 376  Q
    ||||| |||||  |||| |||||||||||||||||||| ||||| ||| ||||||| ||| |||||  | |||||||||    
T  24909639 aaagtcaaattattttcatataagctataagttgttttcataagatattgtggagagcttgtggaaatatgctgaaaac 24909717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 28128524 - 28128411
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||||  |||||||||||| | ||||||||  |||| |||||  |||| || ||||||| || ||||| | ||||||||  ||||||| |||||||    
T  28128524 tatgaataacatatttctattacacaagataaaatgaagtcaaattattttcatagaagctatcagctgtttat-taagctattttggagaatttatgga 28128426  T
Q  363 ataaagctgaaaaca 377  Q
    |  ||||||||||||    
T  28128425 aataagctgaaaaca 28128411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 30571032 - 30570938
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| |||||||||||  ||| ||||| |||||||| | ||||||||| ||| | ||||||||||||| ||| ||  |||||| || |||||||    
T  30571032 taaaataaagttaaattatttttgtatatgctataagctatttttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaa 30570938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 34744010 - 34744064
Alignment:
Q  305 aattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    ||||| ||| ||||| | ||||||||||||| |||||||||| ||||||||||||    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttat 34744064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 39279729 - 39279799
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    ||||||||||||||||||||||||| |||||  ||||||| || ||| ||||| |||  |||| |||||||    
T  39279729 agataaaacaaagttaaattgcttttgtatattctataagctggtttcataagttatcttggaaaacttat 39279799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 39907772 - 39907870
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||| || ||||||||| ||| |||||||||||||  |||||| |||| ||||  | ||||||| ||| ||  ||||||||||||| | |||||||||    
T  39907772 taaaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg 39907870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 43694661 - 43694603
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||||  | ||||||||||    
T  43694661 ttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatg 43694603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 2825308 - 2825235
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||| |||||||||||||| | |||||||  | ||||||||||||||  |||||||||| |  ||||||||||    
T  2825308 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 2825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 12110262 - 12110295
Alignment:
Q  210 gataaacagattaatttgcaacttatagcataag 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  12110262 gataaacagcttaatttgcaacttatagcataag 12110295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 13960884 - 13960929
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgttttt 336  Q
    |||||| |||||||||||| ||| |||||| |||||||||||||||    
T  13960884 ataaaataaagttaaattgtttttgtataacctataagttgttttt 13960929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 18350797 - 18350740
Alignment:
Q  303 taaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||| ||||||||||| |||||| |||||| |||||||||  |||||| ||||||    
T  18350797 taaattgttttcgtataagttataagctgttttcataagctatcatggagagcttatg 18350740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 19302651 - 19302606
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    ||||||||| ||| ||||| | ||||||||||||||||||||||||    
T  19302651 gttaaattgtttttgtatatgttataagttgtttttataagctata 19302606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 24895331 - 24895396
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    ||||| |||||  |||| |||||||||||||||||||| | ||| ||| ||||||| |||||||||    
T  24895331 aaagtcaaattattttcatataagctataagttgttttcacaagatattgtggagagcttatggaa 24895396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 27548229 - 27548302
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||| |||||  ||||| |||| | ||||||||||| |||||| |||||||||  |||| ||||||||||    
T  27548229 agataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttatgga 27548302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 28341160 - 28341083
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataa 366  Q
    ||||||| ||||||||||||  | |  |||| |||||||||||||| ||||| ||||| | ||||||||||| |||||    
T  28341160 agataaaccaaagttaaatttatgttatatatgctataagttgtttgtataaactatattagagaacttatgaaataa 28341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 386
Target Start/End: Complemental strand, 38138571 - 38138486
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||| |||| ||| ||||| |||||||||||||||||| ||||||| ||  ||||||||| ||  ||| |||||| || |||||||    
T  38138571 gttacattgattttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaaaaaagcttatgaa 38138486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 119876 - 119928
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataag 341  Q
    |||||||| |||||||||||| ||  ||| | |||||||||||||||||||||    
T  119876 agataaaataaagttaaattgtttgtgtaaatgctataagttgtttttataag 119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 4017861 - 4017809
Alignment:
Q  59 gacacgtcgacacggataactatttgaaaaaacgatataattgaatgtaatca 111  Q
    |||||| ||||||||||||  |||||| |||||||||||||| | ||||||||    
T  4017861 gacacgccgacacggataataatttgagaaaacgatataatttagtgtaatca 4017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 4970882 - 4970826
Alignment:
Q  304 aaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||| ||| ||||| |||||||||| |||||||||| |||| | |||||||||||    
T  4970882 aaattgtttttgtatatgctataagttctttttataagatatattagagaacttatg 4970826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 18965780 - 18965720
Alignment:
Q  323 tataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    ||||||||||||| |||||||||  |||||  |||||| ||  ||||||||||||||||||    
T  18965780 tataagttgttttcataagctatcttggaggtcttatgaaaacaagctgaaaacagattat 18965720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 343
Target Start/End: Complemental strand, 31002894 - 31002862
Alignment:
Q  311 tttcgtataagctataagttgtttttataagct 343  Q
    |||||||||||||||||| ||||||||||||||    
T  31002894 tttcgtataagctataagctgtttttataagct 31002862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 33673069 - 33673137
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    |||||||||||||| |||||  |||||||||| ||||||| ||||  ||  ||||||||||||| ||||    
T  33673069 gtataagctataagctgtttccataagctatattggagaatttataaaaacaagctgaaaacagtttat 33673137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 34083629 - 34083577
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataag 341  Q
    |||||||| |||||||||||| ||  |||||||||||||| |||||| |||||    
T  34083629 agataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 293 - 388
Target Start/End: Original strand, 21367637 - 21367732
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||| |||||||||||| ||||||||||  ||||||||||||| |||||||||  ||||||||||||| ||  ||||||||||||| || ||||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaaca 21367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 375
Target Start/End: Original strand, 30443859 - 30443945
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||||  ||||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||| ||  ||||||||||    
T  30443859 agataaaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 402633 - 402547
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||||||||| |||||| ||||||||||| ||||  || ||||||| || ||| ||||||||||||| |||||||||    
T  402633 ttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaaca 402547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 30956730 - 30956658
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgg 361  Q
    |||||||| |||||||||||| ||| ||||| ||||||||||||||| | |||||||  ||||||||||||||    
T  30956730 agataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatgg 30956658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 30972542 - 30972470
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgg 361  Q
    |||||||| |||||||||||| ||| ||||| ||||||||||||||| | |||||||  ||||||||||||||    
T  30972542 agataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatgg 30972470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 334
Target Start/End: Original strand, 36101455 - 36101579
Alignment:
Q  210 gataaacagattaatttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattg 309  Q
    ||||||||  ||| ||||||||||||||||||  || |||||||||||||   |||||||||| ||||||| | |    |||||||| ||||| ||| ||    
T  36101455 gataaacaagttattttgcaacttatagcatacatgcttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactg 36101554  T
Q  310 ctttcgtataagctataagttgttt 334  Q
     |||||||||| |||||||||||||    
T  36101555 atttcgtataatctataagttgttt 36101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 33405268 - 33405170
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa-taaagctgaaaacagattatgaacat 389  Q
    ||||| |||||||| ||| |||| ||||||||||||| |||||| |||||||||  || |||||||||| || | |||| |||||||| ||||||||||    
T  33405268 taaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaagttaagccgaaaacagtttatgaacat 33405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 334
Target Start/End: Original strand, 36139779 - 36139889
Alignment:
Q  224 tttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagct 323  Q
    ||||||||||||||||||  || |||| ||||||||   |||||||||| ||||||| | |    |||||||| ||||| ||| || |||||||||||||    
T  36139779 tttgcaacttatagcatacatgcttattaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagct 36139878  T
Q  324 ataagttgttt 334  Q
    |||||||||||    
T  36139879 ataagttgttt 36139889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 36631146 - 36631084
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||||||| ||| ||| | |||||||||||||||||| ||||||| |||||||||||||    
T  36631146 aaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatg 36631084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 1816549 - 1816638
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    |||||||| ||||| ||| || ||| ||||||| ||||||||||||| |||||||||| |||||| |||||  ||  |||||||||||||    
T  1816549 agataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacag 1816638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 21574457 - 21574557
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| |||||||||||| || | |||||||||||| || |||||||||||||   |||||| |||||||||  ||||| ||| ||| |||||||||    
T  21574457 agataaaataaagttaaattgtttacatataagctataactt-tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaaca 21574555  T
Q  389 tg 390  Q
    ||    
T  21574556 tg 21574557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 36189506 - 36189603
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||| ||||| ||||||| ||||   |||||||| |||||||||||| ||| ||||| | |||||| | |||||||||| |||| |||||||||||||    
T  36189506 tatgtataagctatttctcttacaaaagataaaataaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatg 36189603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 36783438 - 36783338
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaata-aagctgaaaacagattatgaac 387  Q
    |||||||| ||||| |||||| |||| ||||| |||| || |||||| |||||||||| ||||| | ||||| |||| ||||||||||||| ||||||||    
T  36783438 agataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattatg-aatataagctgaaaacagcttatgaac 36783340  T
Q  388 at 389  Q
    ||    
T  36783339 at 36783338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 39980727 - 39980792
Alignment:
Q  321 gctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||||||||||||||||||| ||||||||||||| ||  ||| |||||| || |||||||    
T  39980727 gctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaa 39980792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 389
Target Start/End: Original strand, 2201094 - 2201194
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||||| ||| || |||| ||||||||||||| |||||| || ||||||  |||| |  ||| |||| ||||||||||| || |||||||||    
T  2201094 agataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaaca 2201193  T
Q  389 t 389  Q
    |    
T  2201194 t 2201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 10101603 - 10101527
Alignment:
Q  266 gaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagc 342  Q
    ||||||||||||||||| ||   |||||||| |||||||||||| |||| |||||| || |||||||||| ||||||    
T  10101603 gaataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 10212528 - 10212452
Alignment:
Q  266 gaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagc 342  Q
    ||||||||||||||||| ||   |||||||| |||||||||||| |||| |||||| || |||||||||| ||||||    
T  10212528 gaataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 14145878 - 14145934
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| |||||||||||| ||||||||| |||||||||| |||| |||||||||    
T  14145878 agataaaataaagttaaattgttttcgtatatgctataagttattttcataagctat 14145934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 20880444 - 20880539
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||| ||||||||| ||| ||||| |||||||  |||||||| |||||||| ||||||||||||| ||  ||||| |||| || |||||||    
T  20880444 gataaaacaa-gttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaa 20880539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 386
Target Start/End: Complemental strand, 53789552 - 53789468
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| || ||| ||||| ||||||||||||| | |||||||||  ||||||||||||| ||| |||||||||| || |||||||    
T  53789552 ttaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaa 53789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 12862351 - 12862281
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| | | |||||||| ||| ||||| ||||||||||||||| |||||||||| |||||||||||||    
T  12862351 agataaaatagatttaaattgtttt-gtatatgctataagttgttttcataagctatattggagaacttatg 12862281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 14548803 - 14548736
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    |||| |||||||||||||||||||| ||||| |||  |||||| |||||||||  |||||||||||||    
T  14548803 tttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacag 14548736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 386
Target Start/End: Complemental strand, 18405909 - 18405838
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||| ||| |||||  ||| ||||||||||    
T  18405909 gtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaa 18405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 20257505 - 20257572
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||| |||||||||||| ||| ||||| ||||||||||||||||  |||||||| |||||| ||||||    
T  20257505 aaaataaagttaaattgtttttgtatatgctataagttgttttttgaagctatattggagagcttatg 20257572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 47132310 - 47132368
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| ||| ||||| |||||| ||||||||||||||||||| ||||||| |||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatg 47132368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 39602313 - 39602213
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||| | |||||||||||| || |||||||| |||||| |||||| |||||||||  | ||||||||||| ||  ||| ||||||||  |||||||||    
T  39602313 agataacataaagttaaattg-ttgcgtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaaca 39602215  T
Q  389 tg 390  Q
    ||    
T  39602214 tg 39602213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 390
Target Start/End: Original strand, 45541522 - 45541638
Alignment:
Q  274 tatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg-gaataaagctga 372  Q
    ||||||||||||   |||||  |||| ||||||||  ||||||||||||||||  || |||| |||||||||  |||| |||||||| |||| || ||||    
T  45541522 tatttctattacaaaagatagcacaaggttaaattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaat-aacctga 45541620  T
Q  373 aaacagattatgaacatg 390  Q
    |||||| |||||||||||    
T  45541621 aaacagcttatgaacatg 45541638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 50600254 - 50600193
Alignment:
Q  317 ataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    |||||||||||| |||||| || ||||||| ||||||||||||| ||  |||||||||||||    
T  50600254 ataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacag 50600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 40608444 - 40608388
Alignment:
Q  330 tgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||||||||| ||||  ||||||||||||||||  ||||||||||||| |||||||    
T  40608444 tgtttttataaactatcctggagaacttatggaagtaagctgaaaacagcttatgaa 40608388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 385
Target Start/End: Complemental strand, 44061127 - 44061032
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatga 385  Q
    |||||||| || ||||||||| |||  |||||||||||||||||||| ||| | |||  | ||||||||||| ||| ||||| ||||||| ||||||    
T  44061127 agataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct-aaaacagcttatga 44061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 49034335 - 49034299
Alignment:
Q  321 gctataagttgtttttataagctatagtggagaactt 357  Q
    |||||||||||||||||||||||||| ||||||||||    
T  49034335 gctataagttgtttttataagctatattggagaactt 49034299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 20807065 - 20807112
Alignment:
Q  288 gagataaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    |||||||| |||||| ||| || |||||||||||||||||||||||||    
T  20807065 gagataaatcaaagtcaaactgttttcgtataagctataagttgtttt 20807112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 388
Target Start/End: Complemental strand, 24085414 - 24085343
Alignment:
Q  317 ataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||||||||| |||||||| ||||||||  |||||||||| || ||  |||||||||||||  ||||||||    
T  24085414 ataagctataatttgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaaca 24085343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 44295522 - 44295585
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacaga 379  Q
    ||||| |||||||||||||| ||||| ||||  ||||| |||||||||  ||||||||||||||    
T  44295522 tataatctataagttgttttcataagatatatcggagagcttatggaaataagctgaaaacaga 44295585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 49092769 - 49092816
Alignment:
Q  313 tcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||| ||| |||||||||||||||||||||| | |||||||||||    
T  49092769 tcgtatatgctgtaagttgtttttataagctatattagagaacttatg 49092816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 12923429 - 12923383
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    |||||||| ||||| ||| ||||||| ||||||||||||||||||||    
T  12923429 agataaaataaagtcaaactgctttcttataagctataagttgtttt 12923383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 19679430 - 19679376
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||| ||||| ||| || |||| ||||||||||||||||||||||||| ||||    
T  19679430 ataaaataaagtcaaactgttttcttataagctataagttgtttttataaactat 19679376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 378
Target Start/End: Complemental strand, 24887408 - 24887298
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaa 367  Q
    ||||| ||||||||| ||   |||||||| ||||| ||| ||  ||| ||||||||| ||| |||||| |||||||||  |||||| ||||||| |  ||    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataa 24887309  T
Q  368 gctgaaaacag 378  Q
    |||||||||||    
T  24887308 gctgaaaacag 24887298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 25776114 - 25776180
Alignment:
Q  320 agctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||||||||| ||||| | |  || |||||||||||||  ||||||||||||| |||||||    
T  25776114 agctataagttgttttcataagttgtcttgaagaacttatggaagtaagctgaaaacagcttatgaa 25776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 49465767 - 49465695
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    |||||||| |||||||| ||  ||||||||| |||| | |||||||| |||||||||| ||||||||||||||||    
T  49465767 agataaaataaagttaatttt-tttcgtata-gctaaatgttgttttcataagctatactggagaacttatggaa 49465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 50952314 - 50952400
Alignment:
Q  305 aattgctttcgtataagctata-agttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||| |||| ||||||||||| ||||||| | |||| ||||  |||||| |||||||||  ||||| ||||||| |||||||||||    
T  50952314 aattgttttcatataagctatatagttgttgtaataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatg 50952400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 15864820 - 15864877
Alignment:
Q  54 gacatgacacgtcgacacggataactatttgaaaaaacgatataattgaatgtaatca 111  Q
    |||| |||||| ||||||||||||  ||||||||||| ||||||||| | ||||||||    
T  15864820 gacacgacacgccgacacggataataatttgaaaaaatgatataatttagtgtaatca 15864877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 20170489 - 20170586
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| || ||||||||| ||| ||||| ||||||||||||||||| ||| |||  | ||||||| ||| ||  ||| |||||| || |||||||    
T  20170489 agataaaataatgttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaaaagcttatgaa 20170586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 22203422 - 22203467
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||    
T  22203422 gtataatctataagttgttttcataagctatcttggagaacttatg 22203467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 35959559 - 35959474
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||| |||||||||||  ||| ||||| ||| |||||||||| ||||||||||| | ||||| || || ||  ||||||||||    
T  35959559 gataaaataaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 45433043 - 45432942
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||||||  ||||||||||| |||| ||| |||||||| ||||||| | |||  ||  || ||| |||||||||  ||||||||||||  |||||||||    
T  45433043 agataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaaca 45432944  T
Q  389 tg 390  Q
    ||    
T  45432943 tg 45432942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 10357376 - 10357452
Alignment:
Q  266 gaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagc 342  Q
    ||||||||||||||||| ||   |||||||| || ||||||||  |||| |||||| || |||||||||| ||||||    
T  10357376 gaataagttatttctataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcataagc 10357452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 21865564 - 21865628
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||| |||||||||||||||||||| |||||||||  ||||| | ||| ||||  ||||||||||    
T  21865564 tttcatataagctataagttgttttgataagctattttggagtaattacggaagtaagctgaaaa 21865628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 25447348 - 25447292
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| ||| |||||||| ||| |||||||||||||  |||||| |||||||||    
T  25447348 agataaaataaacttaaattgtttttgtataagctataaactgttttcataagctat 25447292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 28622094 - 28622006
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| ||| ||| || ||||||||||| |||||| |||| ||||  | ||||||||||| ||  || |||||||||| |||||||    
T  28622094 aaagttaagttgtttttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 33046886 - 33046842
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||    
T  33046886 tataagctataagttgttttcataagctgtacaggagaacttatg 33046842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 37788826 - 37788882
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| |||||  ||||  |||||||||| |||||||||||||| |||||||||    
T  37788826 agataaaataaagtccaattattttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 40122856 - 40122801
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| ||||| ||| || |||| || |||||||||||||||||||||||||||    
T  40122856 agataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctat 40122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 41057017 - 41057061
Alignment:
Q  302 ttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||||    
T  41057017 ttaatttgttttcatataagctataagttgttttcataagctata 41057061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 42734015 - 42733967
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    ||||||||||||||||||||| |  |||||| ||||||| |||||||||    
T  42734015 gtataagctataagttgttttcaccagctatcgtggagagcttatggaa 42733967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 55113560 - 55113592
Alignment:
Q  220 ttaatttgcaacttatagcataagtgtttatca 252  Q
    |||||||||| ||||||||||||||||||||||    
T  55113560 ttaatttgcagcttatagcataagtgtttatca 55113592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 10799432 - 10799529
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||| ||||||||| |||||| || |||||||||||||||| | || ||||| | ||||||||||||| ||  |||||||||||||||||| ||||||    
T  10799432 aaaataaagttaaagtgcttttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctgaaaacagattataaacatg 10799529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 3234107 - 3234048
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatg 3234048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 390
Target Start/End: Complemental strand, 31517922 - 31517743
Alignment:
Q  209 ggataaacagattaatttgcaacttatagcataagtgtttatcaa-ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaat 307  Q
    ||||||| || |||||||||| |||||||||||||  |||||||  |||||| |||||  ||| | ||||||||  ||   |||||||| ||||||||||    
T  31517922 ggataaatagcttaatttgcagcttatagcataagcatttatcatgataagtacatat--ata-gctatttctacaacaaaagataaaataaagttaaat 31517826  T
Q  308 tgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    || |||| ||||||||||||| ||| || |||| || |  |||||| |||||| ||  ||||||||||||| |||||||||||    
T  31517825 tgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatg 31517743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 473133 - 473227
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| |||||||||||| |||||| || ||||||||||||||||||||| | || ||||||||||||| ||  ||| |||||| || |||||||    
T  473133 taaaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaa 473227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 17603476 - 17603420
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactt 357  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  17603476 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaactt 17603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 7218175 - 7218080
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaac 387  Q
    ||||| ||||| |||||| |||| |||||||||||||||||||| |||| ||||  ||||||||||||| ||  ||| ||||||||| || |||||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaac 7218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 41505661 - 41505720
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactt 357  Q
    |||||||||||| ||||||||| | |||||| ||||||||||||||||| ||||||||||    
T  41505661 aaagttaaattgttttcgtatatgttataagctgtttttataagctatattggagaactt 41505720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 49888733 - 49888804
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| |||||| ||||| ||||||||||||||| ||||||||| |||||||||  | |||||||||||    
T  49888733 agataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 49888804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 10809315 - 10809412
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||| ||||||||| |  ||| || |||||||||||||||| | || ||||||| ||||||||||||| ||  |||||||||||| ||||| ||||||    
T  10809315 aaaataaagttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaaaacatattataaacatg 10809412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 27738284 - 27738211
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||| ||||| |||||| |||| |||||||||||| ||||||| ||||||||||  ||||| ||||||||    
T  27738284 agataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatgga 27738211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 388
Target Start/End: Complemental strand, 27820439 - 27820342
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||| |||| ||||||| ||  |||||||||||| | ||||||||||||||||  ||||||| ||||| ||  |||||||||| || |||||||||    
T  27820439 ataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 27820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 34290202 - 34290299
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| |||||||| ||  ||| |||||||||||||| |||||| |||||||||  || |||||||||| ||  ||||||||||||  |||||||    
T  34290202 agataaaataaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 37842459 - 37842358
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||| ||| ||||||||| ||  |||| ||||||||||||||||||| |||||||||  || |||||||||  ||  ||||||||||| | |||||||||    
T  37842459 agatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaaca 37842360  T
Q  389 tg 390  Q
    ||    
T  37842359 tg 37842358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 25006135 - 25006063
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaat 364  Q
    ||||| ||||| |||||| |||| |||||||||||||||||||| |||||||||  |||||| ||||| ||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttattgaat 25006063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 34952184 - 34952268
Alignment:
Q  292 taaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaac 376  Q
    ||||| |||||||||||| ||||| ||||||| ||||||||||| |||||||||    ||||||||||| ||  |||||||||||    
T  34952184 taaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaataagctgaaaac 34952268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 8130430 - 8130489
Alignment:
Q  317 ataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaac 376  Q
    ||||||||||||||||||| |||||||||  |||| |||||||||||  |||||||||||    
T  8130430 ataagctataagttgttttcataagctatcatggaaaacttatggaaacaagctgaaaac 8130489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 14576756 - 14576689
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactt 357  Q
    ||||||| |||||||||||| ||| ||||| ||||||| || ||||||||||||||| | ||||||||    
T  14576756 gataaaataaagttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt 14576689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 27976567 - 27976630
Alignment:
Q  295 aacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| |||||||||  | |||||||||    
T  27976567 aacaaagttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaactta 27976630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 42174847 - 42174918
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| ||  ||| | ||||||| |||||||    
T  42174847 gtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaa 42174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 388
Target Start/End: Complemental strand, 51695598 - 51695500
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||| |||||| ||||||||||| ||| || |||||| |||||||||  ||||||| ||||| ||  |||||||||| || |||||||||    
T  51695598 agataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 51695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 390
Target Start/End: Complemental strand, 10199533 - 10199411
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaa 367  Q
    ||||||||||||||| || | |||||||| ||||| ||| |  |||||||||| | ||||| | |||| |||||||||  | |||| |||||| ||  ||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataa 10199434  T
Q  368 gctgaaaacagattatgaacatg 390  Q
    ||||||||||  |||||||||||    
T  10199433 gctgaaaacaacttatgaacatg 10199411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 375
Target Start/End: Original strand, 51688671 - 51688756
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||||| |||| ||||||| ||| ||| | |||||||||||||||  |||||||| |||||| ||||||| ||| ||||||||||    
T  51688671 agataaaataaagataaattgtttttgtacatgctataagttgttttcgtaagctatcgtggag-acttatgaaattaagctgaaaa 51688756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 24915155 - 24915058
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||| |||||||||||| ||| ||||| |||||||| |||||| ||||||| |  |||||||||| || ||  ||| |||||| || |||||||    
T  24915155 agataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaa 24915058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 30257649 - 30257750
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||||| ||| || || | |||||||| ||||||||||| |||| ||||  |||||  ||||| |||  ||||||||||||| |||||||||    
T  30257649 agataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaaca 30257748  T
Q  389 tg 390  Q
    ||    
T  30257749 tg 30257750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 47885181 - 47885120
Alignment:
Q  220 ttaatttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttcta 281  Q
    |||||||||| ||||||||||||| | |||||| |||| | | |||||||||||||||||||    
T  47885181 ttaatttgcagcttatagcataagcgcttatcatataattgcttatgaataagttatttcta 47885120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 836443 - 836387
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| |||  ||||||| ||| |||||||||||||||| ||||||||||||||    
T  836443 agataaaataaaactaaattgtttttgtataagctataagttatttttataagctat 836387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 5422024 - 5421968
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| | ||| |||||| |||| |||||||||||||||||||| |||||||||    
T  5422024 agataaaatatagtcaaattgttttcttataagctataagttgttttgataagctat 5421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 7472287 - 7472379
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag-attatgaacatg 390  Q
    ||||||||||| ||| |||||| ||||||| |||||  |||||||||  |||||| |||||| ||  |||||||||||||  |||||||||||    
T  7472287 aagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttttatgaacatg 7472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 13809964 - 13810032
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactt 357  Q
    |||||||| |||||||||||| ||| ||||| ||||||  |||||||||||| ||||| | ||||||||    
T  13809964 agataaaataaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaactt 13810032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 33204492 - 33204404
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||||| |||||||| ||  ||||||||||||| |||| |||||| |||||||||    || |||||||||||  ||||||||||||    
T  33204492 agataaaataaagttaatttattttcgtataagctgtaagctgttttcataagctatctgagacaacttatggaagtaagctgaaaaca 33204404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 36070216 - 36070268
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataag 341  Q
    |||||||| ||||||||||||  |||| ||||||||||||||||||| |||||    
T  36070216 agataaaataaagttaaattgtcttcggataagctataagttgttttcataag 36070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 49517015 - 49517091
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagcta 344  Q
    ||||||||||||||| ||   |||||||| ||||| |||||| |||| | ||||||||||| |||||| ||||||||    
T  49517015 ataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 360
Target Start/End: Original strand, 7069283 - 7069338
Alignment:
Q  305 aattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||| |||||||||||||||||| || |||| ||||||||  |||||||||||||    
T  7069283 aattgttttcgtataagctataagctgcttttgtaagctatcttggagaacttatg 7069338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 9572212 - 9572141
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| |||||||||||||||| ||||||||||||||  ||||| ||| || ||  | |||||||||||    
T  9572212 agataaaataaagttaaattgcttttgtataagctataagccgttttcatatgccatcattgagaacttatg 9572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 11218038 - 11218003
Alignment:
Q  300 agttaaattgctttcgtataagctataagttgtttt 335  Q
    |||||||||| |||||||||||||||||||||||||    
T  11218038 agttaaattgttttcgtataagctataagttgtttt 11218003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 23902149 - 23902070
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||| |||||||||||||||||||| | |||||||  | |||| |||||||||  ||||||||||||  ||||| |||||    
T  23902149 tttcatataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacatg 23902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 37295813 - 37295766
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||||||| |||||| |||||||||||||||||| |||| ||||    
T  37295813 aaagttaaattgttttcgtttaagctataagttgttttcataacctat 37295766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 37841965 - 37842008
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtt 333  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||    
T  37841965 gataaaataaagttaaattgttttcgtataagctatatgttgtt 37842008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 45975682 - 45975753
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||||||||| ||| |||||| |||||||||  ||||||| ||||| ||  ||||||||||||| |||||||    
T  45975682 gtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 12564569 - 12564515
Alignment:
Q  323 tataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||| |||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaaaaca 12564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 35590970 - 35590908
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    ||||||||||||||| | ||| |||||||||  |||||| |||||||||  ||||||||||||    
T  35590970 gtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaaca 35590908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 48830206 - 48830124
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||| ||||||||||||||||||   |||||||| ||||| ||| |  |||| ||||||||||||  |||||| |||||||||    
T  48830206 tatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctat 48830124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 1510398 - 1510345
Alignment:
Q  305 aattgctttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    ||||| ||| ||||| | ||||||||||||||||||||| || |||||||||||    
T  1510398 aattgtttttgtataggttataagttgtttttataagctctattggagaactta 1510345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 3924565 - 3924646
Alignment:
Q  264 atgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||| ||| ||||||||| || | ||||||||  |||  ||| || |||||||||| |||| |||||||||||||||||||    
T  3924565 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 3924646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 4920935 - 4920894
Alignment:
Q  209 ggataaacagattaatttgcaacttatagcataagtgtttat 250  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  4920935 ggataaacagcttaatttgcagcttatagcataagtgcttat 4920894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 6556947 - 6557008
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||||||| ||| ||||| | ||||||||||||||||||| |||| |  ||||||||||    
T  6556947 aagttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatg 6557008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 14630043 - 14629970
Alignment:
Q  316 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 389  Q
    ||||||||||||| | |||| |||||||||  ||||||  ||||||||  ||||||||||||  ||||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacat 14629970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 17269220 - 17269285
Alignment:
Q  293 aaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    |||| ||||| |||||| |||| ||||||| |||||||||||| |||||||||  |||||| ||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 25479547 - 25479648
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| || || ||||||  ||| |||| ||||||||||||||| |||||||||  | |||| |||||| ||  ||||||||||||  | |||||||    
T  25479547 agataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaaca 25479646  T
Q  389 tg 390  Q
    ||    
T  25479647 tg 25479648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 30371114 - 30371215
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||| ||| | |||||| |||| |||||||||||||||||||| |||||  ||  |||||| | ||| |||  ||||||||||||  ||||| |||    
T  30371114 agataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaacttatggaca 30371213  T
Q  389 tg 390  Q
    ||    
T  30371214 tg 30371215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 30582052 - 30581995
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    |||||||| |||||||| ||| ||| ||||| |||| ||| |||||||||||||||||    
T  30582052 agataaaataaagttaacttgtttttgtatatgctacaagctgtttttataagctata 30581995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 33186233 - 33186286
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttttataagct 343  Q
    ||||||| |||||||||||  | | ||||| |||||||||||||||||||||||    
T  33186233 gataaaagaaagttaaatttttcttgtatatgctataagttgtttttataagct 33186286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 35179127 - 35179200
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatg 384  Q
    |||||| |||| |||||| |||||| ||||| |||  ||||||||||||| ||  ||||||||||||| |||||    
T  35179127 tttcgtttaagttataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatg 35179200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 38503535 - 38503470
Alignment:
Q  323 tataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    |||||||||||||| | ||||||  ||||||||||||| ||  ||||||||||||  |||||||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 41163108 - 41163071
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctata 326  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  41163108 agataaaatgaagttaaattgctttcgtataagctata 41163071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 49938747 - 49938784
Alignment:
Q  323 tataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||||||||||||||||||| | |||||||||||    
T  49938747 tataagttgtttttataagctatattagagaacttatg 49938784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 51929607 - 51929546
Alignment:
Q  325 taagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    |||| ||||||||||| ||||| ||||||||||||||||  ||| |||||| || |||||||    
T  51929607 taagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaa 51929546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 3224398 - 3224490
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||| ||||||  ||| ||||||||||| | ||||||||||||||||  | ||||||||||| ||  ||||||| ||||  ||||| |||||    
T  3224398 aaagtcaaattgaattcatataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatg 3224490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 7137076 - 7137016
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||| ||||||| |||||| |||||||||  ||||||||||||| ||  ||||||||||    
T  7137076 gtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 7927875 - 7927923
Alignment:
Q  322 ctataagttgtttttataagctatagtggagaacttatggaataaagct 370  Q
    ||||||||||||| ||||||||||| |||||||||| | ||| ||||||    
T  7927875 ctataagttgtttatataagctatactggagaacttgttgaaaaaagct 7927923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 10581152 - 10581108
Alignment:
Q  318 taagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||||||||||||| |||||||||  ||| |||||||||||    
T  10581152 taagctataagttgttttcataagctattatggggaacttatgga 10581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 15361679 - 15361767
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||||||  ||||| |||||  |||| ||||||||||||| |||||| ||||| |||  | ||||  ||||||||| ||||||||||||    
T  15361679 agataaagtaaagtcaaattattttcatataagctataagctgttttcataagatattcttgagagtttatggaattaagctgaaaaca 15361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 15515529 - 15515581
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    ||||||||||||||||||||||||| ||||| |||  |||| | |||||||||    
T  15515529 tttcgtataagctataagttgttttcataagttatcatggatagcttatggaa 15515581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 23445312 - 23445356
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||||    
T  23445312 gttaaattgtttttgtataagccataagttgttttcataagctat 23445356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 25005879 - 25005831
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttat 359  Q
    |||| |||||||||||||||||||| |||||||||  |||||| |||||    
T  25005879 tttcatataagctataagttgttttcataagctatcctggagagcttat 25005831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 29793748 - 29793804
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||| | |||||||| ||| |||||||||||||||||||||  || |||||||||    
T  29793748 agataacataaagttaagttgttttcgtataagctataagttgagttcataagctat 29793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 44375521 - 44375449
Alignment:
Q  209 ggataaacagattaatttgcaacttatagcataagtgtttatcaaataagttcatatgaataagttatttcta 281  Q
    |||||||||| ||||||    ||||||| | ||||||||||||  |||||||| |||| ||||||||||||||    
T  44375521 ggataaacagtttaattaagcacttataacctaagtgtttatcttataagttcttatggataagttatttcta 44375449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 46969632 - 46969596
Alignment:
Q  264 atgaataagttatttctattacgcgagataaaacaaa 300  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  46969632 atgaataagttatttatattacgcaagataaaacaaa 46969596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 49557086 - 49557165
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttt--tataagctat 345  Q
    ||||||||||||||| ||   |||||||| |||||||||| |  ||| | ||||||||||||||||||  ||||||||||    
T  49557086 ataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcatataagctat 49557165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 305 - 388
Target Start/End: Original strand, 43504733 - 43504816
Alignment:
Q  305 aattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||| ||| ||| |||||||||| ||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| ||||    
T  43504733 aattgttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaaca 43504816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 7918875 - 7918783
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattat 383  Q
    |||||| |||||||||||  |||| | |||||||||||||||||| |||||||||  || ||| ||| |||||  ||||||||||||||||||    
T  7918875 ataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacagattat 7918783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 345
Target Start/End: Original strand, 31884501 - 31884616
Alignment:
Q  230 acttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagt 329  Q
    |||||||||||||| | |||||| | |||| |||||| ||||||||||||||| ||   | ||||||  || || ||||| |||| |||||||||||| |    
T  31884501 acttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaat 31884600  T
Q  330 tgtttttataagctat 345  Q
    |||||| |||||||||    
T  31884601 tgttttcataagctat 31884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 3537135 - 3537046
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttt--tataagctatagtggagaacttatggaataaagctgaaaac 376  Q
    |||||||| ||||| |||||| |||||||||||||||| |||||| |  |||||| |||  ||||||||||||||||  |||||||||||    
T  3537135 agataaaataaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatggaaataagctgaaaac 3537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 38602299 - 38602364
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaa 354  Q
    ||||||||  ||||||||||||||| | ||| |||||||| ||||||||||||||||| |||||||    
T  38602299 agataaaatgaagttaaattgcttttgcatatgctataagctgtttttataagctatactggagaa 38602364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 378
Target Start/End: Original strand, 10114397 - 10114544
Alignment:
Q  231 cttatagcataagtgtttatca-aataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagt 329  Q
    ||||||||||||||| |||| |  |||||| | |||| ||||| |||||||||  |   ||||||||  ||||| ||||| ||| ||||||||||||||     
T  10114397 cttatagcataagtggttatgatgataagtgcttatgtataagctatttctatagcaaaagataaaa-taagttgaattgttttggtataagctataagc 10114495  T
Q  330 tgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    |||||| || ||||||| |||||||| |||| ||  |||||||||||||    
T  10114496 tgttttcattagctatattggagaacatatgaaaataagctgaaaacag 10114544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 375
Target Start/End: Original strand, 18133632 - 18133708
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    ||||||||||||||| |||||  ||||||| || |||||||| ||||| ||||||||||||| ||  ||||||||||    
T  18133632 aagttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaa 18133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 24558819 - 24558875
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    ||||||| | ||||||||||  ||||||||||||||||||||||||| |||||||||    
T  24558819 agataaaccgaagttaaattattttcgtataagctataagttgttttcataagctat 24558875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 10758358 - 10758303
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    |||||| |||||||||||| ||| ||||| |||||||||||| |||||||||||||    
T  10758358 ataaaataaagttaaattgtttttgtatatgctataagttgtctttataagctata 10758303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Complemental strand, 2595101 - 2595000
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg-gaataaagctgaaaacagattatgaac 387  Q
    |||||||| |||||||||||| |||||||  ||| |||||||||||| |||||||  | | || |||||||| |||| ||||||||||||  ||||||||    
T  2595101 agataaaataaagttaaattgttttcgtactagccataagttgttttcataagctgcattagacaacttatgagaat-aagctgaaaacaacttatgaac 2595003  T
Q  388 atg 390  Q
    |||    
T  2595002 atg 2595000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 11861796 - 11861841
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||    
T  11861796 gtatatgctataagttgtttttataagctataatagagaacttatg 11861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 12976181 - 12976264
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaa 375  Q
    |||||| |||||||||||  |||  |||| |||| || |||||||||||||||||| | ||||||||||| ||| ||||||||||    
T  12976181 ataaaataaagttaaattaattttttatatgctacaatttgtttttataagctatattagagaacttatgaaat-aagctgaaaa 12976264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 20672757 - 20672817
Alignment:
Q  330 tgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    ||||||||||||||||  |||||| |||||| ||  ||||||||||||| |||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatg 20672817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 34770858 - 34770914
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| ||||| |||||| |||| | |||||||||||||||||| |||||||||    
T  34770858 agataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctat 34770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 2482831 - 2482927
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaac 387  Q
    |||||||| ||||| ||| || ||| |||||||||||||| |||||| ||  |||||  |||| ||||||| |||  ||||||||||||| ||||||||    
T  2482831 agataaaataaagtcaaaatgtttttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatgaac 2482927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 11795080 - 11795159
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatg 390  Q
    |||| |||||| |||||| || ||| |||||||||  |||||| |||||||||  ||||||||||||| ||||| |||||    
T  11795080 tttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatg 11795159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 27028807 - 27028894
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 386  Q
    ||||||||||| ||  ||||| |||||||| |||||| |||||||||  |||||| |||||| ||  |||||||||| || |||||||    
T  27028807 aagttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 346
Target Start/End: Complemental strand, 30043840 - 30043793
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctata 346  Q
    |||||||||||||||| |||| |||||||| |||||| ||||||||||    
T  30043840 aagttaaattgctttcatatatgctataagctgttttcataagctata 30043793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 390
Target Start/End: Original strand, 34849043 - 34849170
Alignment:
Q  263 tatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatgga 362  Q
    |||||||||| ||||||| || | | |||||||| ||||| | |||  ||| ||||||| |||||| |||| | ||||||| |  || ||||||||||||    
T  34849043 tatgaataagatatttcttttgcacaagataaaataaagtcacattatttttgtataagatataagctgttatcataagctttcttgtagaacttatgga 34849142  T
Q  363 ataaagctgaaaacagattatgaacatg 390  Q
    |   |||||||||| | |||||||||||    
T  34849143 aatcagctgaaaacggcttatgaacatg 34849170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 10120733 - 10120811
Alignment:
Q  300 agttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacag 378  Q
    |||||||||| ||| |||||| ||||||| |||||  || | ||||| ||||||||||||| ||  |||||||||||||    
T  10120733 agttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaaaacag 10120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 12361137 - 12361259
Alignment:
Q  268 ataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaa 367  Q
    ||||||||||||||| |    ||||||||  |||| |||||| |||| ||||||||||||| |||||| ||||| |||   ||||| || ||||||  ||    
T  12361137 ataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataa 12361236  T
Q  368 gctgaaaacagattatgaacatg 390  Q
    | ||||||||| ||||| |||||    
T  12361237 gttgaaaacagcttatggacatg 12361259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 21653047 - 21653145
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaac 387  Q
    |||||||| |||||||||||| |||||| || |||| || ||| ||| || ||||||  |||||| |||||| ||  |||||||||| || ||||||||    
T  21653047 agataaaataaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaac 21653145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 28769421 - 28769355
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaaca 377  Q
    |||| ||||||||||||| |||||| |||||||||  ||||||  ||||||||  ||||||||||||    
T  28769421 tttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaaca 28769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 345
Target Start/End: Complemental strand, 41336807 - 41336693
Alignment:
Q  231 cttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagtt 330  Q
    ||||||||||||| ||||||||||||| | | |||| |||| | |||| ||| ||   |||||||| | ||| |||||| |||| ||||| ||| || ||    
T  41336807 cttatagcataagcgtttatcaaataaatgcttatgtataaatcatttttatgacaaaagataaaatatagtcaaattgttttcatataaactagaactt 41336708  T
Q  331 gtttttataagctat 345  Q
    ||||| |||||||||    
T  41336707 gttttcataagctat 41336693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 9834878 - 9834837
Alignment:
Q  304 aaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||| |||| |||||||||||||||||||| |||||||||    
T  9834878 aaattgttttcatataagctataagttgttttcataagctat 9834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 9956896 - 9956831
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaac 376  Q
    |||| |||||| ||||||||||||| |||| ||||  ||||||||||||| ||  |||||||||||    
T  9956896 tttcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaac 9956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 16210989 - 16210944
Alignment:
Q  290 gataaaacaaagttaaattgctttcgtataagctataagttgtttt 335  Q
    ||||||| ||||||| |||| |||| ||||||||||||||||||||    
T  16210989 gataaaataaagttacattgttttcatataagctataagttgtttt 16210944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 26771233 - 26771302
Alignment:
Q  291 ataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||| ||| |||||||| ||| ||||| |||||||| | |||||||||| |||| | |||||||||||    
T  26771233 ataaaataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatg 26771302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 28763346 - 28763411
Alignment:
Q  301 gttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataa 366  Q
    |||||||||||||   ||| |||| ||||||||||||||||||||| ||  ||||||||| |||||    
T  28763346 gttaaattgcttttacatatgctagaagttgtttttataagctatattgctgaacttatgaaataa 28763411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 30389065 - 30389166
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 388  Q
    ||||||||  || ||| ||||||||  ||||||||||| | |||||| ||||||| |  | ||||||||||| ||  ||||||||||||  |||||||||    
T  30389065 agataaaatgaaattagattgcttttatataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaaca 30389164  T
Q  389 tg 390  Q
    ||    
T  30389165 tg 30389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 30657842 - 30657805
Alignment:
Q  323 tataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  30657842 tataagatgtttttataagctatattggagaacttatg 30657805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 31891883 - 31891928
Alignment:
Q  315 gtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    ||||||||||||||||||||| |||||||||| || ||| ||||||    
T  31891883 gtataagctataagttgttttcataagctatattgaagagcttatg 31891928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 1470960 - 1470904
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctat 345  Q
    |||||||| ||||| ||||| ||||| ||||||||||||| |||||| |||| ||||    
T  1470960 agataaaataaagtcaaattactttcatataagctataagctgttttcataacctat 1470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 13652191 - 13652255
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    |||| |||||| |||| |||||| ||||| |||||||||||||||||  |||||| |||| ||||    
T  13652191 aagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaa 13652255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 13710834 - 13710898
Alignment:
Q  299 aagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaa 363  Q
    |||| |||||| |||| |||||| ||||| |||||||||||||||||  |||||| |||| ||||    
T  13710834 aagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaa 13710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 34863481 - 34863525
Alignment:
Q  67 gacacggataactatttgaaaaaacgatataattgaatgtaatca 111  Q
    ||||||||||| |||||||||||| ||  ||||||||||||||||    
T  34863481 gacacggataattatttgaaaaaatgacttaattgaatgtaatca 34863525  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 35534715 - 35534646
Alignment:
Q  289 agataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatg 360  Q
    |||||||| |||||||||||| ||| ||||  | |||| |||||||| ||||| |||| |||||||||||||    
T  35534715 agataaaataaagttaaattgtttttgtat--gttatatgttgttttcataagttatattggagaacttatg 35534646  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 35869825 - 35869865
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtgga 351  Q
    |||| |||||||||||||||||||| ||||||||| |||||    
T  35869825 tttcatataagctataagttgttttcataagctattgtgga 35869865  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 39881821 - 39881769
Alignment:
Q  324 ataagttgtttttataagctatagtggagaacttatggaataaagctgaaaac 376  Q
    |||| |||||||||||||||||  |||||| |||||||||  |||||||||||    
T  39881821 ataaattgtttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 42215411 - 42215311
Alignment:
Q  288 gagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaac 387  Q
    ||||||||| ||||| ||| || ||| |||||| ||||||  | |||| ||| |||||  |||||| |||||| ||  ||||||||||||| ||||||||    
T  42215411 gagataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaac 42215312  T
Q  388 a 388  Q
    |    
T  42215311 a 42215311  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 42597332 - 42597420
Alignment:
Q  254 ataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagttgtttttataagc 342  Q
    |||||| | |||| ||||| ||||||||| ||   |||||||| ||||| |||||| |||| |  ||||||||||||||||| ||||||    
T  42597332 ataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 345
Target Start/End: Original strand, 27484 - 27598
Alignment:
Q  231 cttatagcataagtgtttatcaaataagttcatatgaataagttatttctattacgcgagataaaacaaagttaaattgctttcgtataagctataagtt 330  Q
    |||||||||||||   ||||||  ||||| | |||| ||||||||||||||| ||   |||||||| ||||| |||||| |||| ||||| |||||||||    
T  27484 cttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagtt 27583  T
Q  331 gtttttataagctat 345  Q
    ||||| |||| ||||    
T  27584 gttttcataaactat 27598  T

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Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 3004 - 3051
Alignment:
Q  311 tttcgtataagctataagttgtttttataagctatagtggagaactta 358  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  3004 tttcgtataagctataagttgttttaataagctatattggagacctta 3051  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 11850 - 11814
Alignment:
Q  298 aaagttaaattgctttcgtataagctataagttgttt 334  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11850 aaagttaaattgttttcgtataagctataagttgttt 11814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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