View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5400_high_6 (Length: 667)
Name: NF5400_high_6
Description: NF5400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5400_high_6 |
 | |
|
| [»] scaffold1453 (2 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 468; Significance: 0; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 13 - 544
Target Start/End: Original strand, 30049252 - 30049806
Alignment:
| Q |
13 |
tgaatcatgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049252 |
tgaatcatgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
30049351 |
T |
|
| Q |
113 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049352 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
30049451 |
T |
|
| Q |
213 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049452 |
gcacttcctagtgccaagttcatggagctaagaagcaagctaggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
30049551 |
T |
|
| Q |
313 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgca |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30049552 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcacaagtaagattatctgca |
30049651 |
T |
|
| Q |
394 |
caagttaagtaggtttatgtc----atatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggat |
489 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049652 |
caagttaagtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggat |
30049751 |
T |
|
| Q |
490 |
ggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049752 |
ggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
30049806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 13 - 544
Target Start/End: Original strand, 7162205 - 7162758
Alignment:
| Q |
13 |
tgaatcatgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
112 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7162205 |
tgaatcatatacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaactgccaaaaatccaattcaacatggaagagcaaagcatat |
7162304 |
T |
|
| Q |
113 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
7162305 |
caatgtcaaatttcatgctataagagaagctgaacagaatggagatgtaaaattgcagcactgcagttctgaagaacaattggcagacattttaaaaaag |
7162404 |
T |
|
| Q |
213 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
312 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7162405 |
gcacttgctagtgccaagttcatggagctaagaagcaagctgggagtattccagaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
7162504 |
T |
|
| Q |
313 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaagattat-ctgcac----------------- |
394 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | ||| |||||| |
|
|
| T |
7162505 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaatcattttaacttattttgttagtaaaactatgctgcacaagtaataaggttatct |
7162604 |
T |
|
| Q |
395 |
----aagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatg |
490 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7162605 |
gcacaagttaagcaggtttatgtcatatgacatcagctaagcataggctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatg |
7162704 |
T |
|
| Q |
491 |
gtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7162705 |
gtttgtattaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
7162758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 285 - 544
Target Start/End: Original strand, 30045121 - 30045403
Alignment:
| Q |
285 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa-- |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045121 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaa |
30045220 |
T |
|
| Q |
383 |
-----------------gattatctgcacaagttaagtaggtttatgtcatat----gacatcagctaagcataggctgagtcattacttagtatttggc |
461 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045221 |
ctatgctgcacaagtaagattatctgcacaagttaagtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttggc |
30045320 |
T |
|
| Q |
462 |
tataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045321 |
tataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
30045403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 30045440 - 30045476
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045440 |
gagcttattgcttctgctgccattacaaaagctaaca |
30045476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 30049843 - 30049879
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049843 |
gagcttattgcttctgctgccattacaaaagctaaca |
30049879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 613
Target Start/End: Original strand, 7162795 - 7162828
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagcta |
613 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
7162795 |
gagcttattgcttctgctgccattacaaaagcta |
7162828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 44732164 - 44732201
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
44732164 |
gagcttattgcttctgctgcctttgcaaaagctaacag |
44732201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 44734477 - 44734513
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
44734477 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
44734513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 468; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 13 - 544
Target Start/End: Original strand, 3945506 - 3946060
Alignment:
| Q |
13 |
tgaatcatgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945506 |
tgaatcatgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
3945605 |
T |
|
| Q |
113 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945606 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
3945705 |
T |
|
| Q |
213 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945706 |
gcacttcctagtgccaagttcatggagctaagaagcaagctaggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
3945805 |
T |
|
| Q |
313 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgca |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3945806 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcacaagtaagattatctgca |
3945905 |
T |
|
| Q |
394 |
caagttaagtaggtttatgtc----atatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggat |
489 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945906 |
caagttaagtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggat |
3946005 |
T |
|
| Q |
490 |
ggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3946006 |
ggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
3946060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 283 - 544
Target Start/End: Original strand, 3941377 - 3941661
Alignment:
| Q |
283 |
agtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941377 |
agtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa |
3941476 |
T |
|
| Q |
383 |
-------------------gattatctgcacaagttaagtaggtttatgtcatat----gacatcagctaagcataggctgagtcattacttagtatttg |
459 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941477 |
aactatgctgcacaagtaagattatctgcacaagttaagtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttg |
3941576 |
T |
|
| Q |
460 |
gctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941577 |
gctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
3941661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 3941693 - 3941730
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941693 |
gagcttattgcttctgctgccattacaaaagctaacag |
3941730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 3946092 - 3946128
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3946092 |
gagcttattgcttctgctgccattacaaaagctaaca |
3946128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 648
Target Start/End: Original strand, 55447051 - 55447082
Alignment:
| Q |
617 |
gaaagaaatgtggaaaaccatttcatcacatc |
648 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
55447051 |
gaaagaaatgtggaaaaccatttcatcacatc |
55447082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 22804932 - 22804968
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
22804932 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
22804968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 445; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 13 - 544
Target Start/End: Original strand, 22365134 - 22365684
Alignment:
| Q |
13 |
tgaatcatgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365134 |
tgaatcatgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
22365233 |
T |
|
| Q |
113 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365234 |
caatgtcaaatttcatgctataagagaagctgaacagaatggagatgtaaaattgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
22365333 |
T |
|
| Q |
213 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365334 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtattccagataagttttaaggaggagtgttgactaattgacctataaaactttt |
22365433 |
T |
|
| Q |
313 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgca |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
22365434 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcataagtaaggttatctgca |
22365533 |
T |
|
| Q |
394 |
caagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggta |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22365534 |
caagttaagtaggtttatgtcatatgacatcaactaagcataggctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatgata |
22365633 |
T |
|
| Q |
494 |
tgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22365634 |
tgtatcaaatttgcagtatagtaaacattgttattgtccctttctcttcca |
22365684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 285 - 544
Target Start/End: Original strand, 22361019 - 22361297
Alignment:
| Q |
285 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa-- |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22361019 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaag |
22361118 |
T |
|
| Q |
383 |
-----------------gattatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctata |
465 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22361119 |
ctatgctgcacaagtaaggttatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattactaagtatttggctata |
22361218 |
T |
|
| Q |
466 |
agtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22361219 |
agtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
22361297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 23397298 - 23397192
Alignment:
| Q |
388 |
tctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatgg |
487 |
Q |
| |
|
|||| ||||||||| |||||||||||| |||||||||| | ||| ||| | | ||||||||| |||||||| || ||| |||||||||| ||||||||| |
|
|
| T |
23397298 |
tctgtacaagttaaataggtttatgtcgtatgacatcaacaaagtataagttatgtcattactaagtatttgactctaaatatgtaagaaagatgtatgg |
23397199 |
T |
|
| Q |
488 |
atggtat |
494 |
Q |
| |
|
||||||| |
|
|
| T |
23397198 |
atggtat |
23397192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 22361333 - 22361370
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22361333 |
gagcttattgcttctgctgccattacaaaagctaacag |
22361370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 621
Target Start/End: Complemental strand, 36028843 - 36028802
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacagaaag |
621 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36028843 |
gagcttattgcttctgctgccattacaaaagctaacaaaaag |
36028802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 580 - 614
Target Start/End: Original strand, 22365720 - 22365754
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaa |
614 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365720 |
gagcttattgcttctgctgccattacaaaagctaa |
22365754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 544
Target Start/End: Complemental strand, 36028912 - 36028879
Alignment:
| Q |
511 |
atagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
36028912 |
atagtaaacattgttattgtccctttctcttcca |
36028879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 22135200 - 22135264
Alignment:
| Q |
78 |
aaaaatccaattcaacatggaagaacaaagcatatcaatgtcaaatttcatgctataagagaagc |
142 |
Q |
| |
|
||||||||| |||| ||||| ||||| ||||| |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
22135200 |
aaaaatccagttcagcatggtagaactaagcacatcaatgtaaaattccatgccataagagaagc |
22135264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 23397404 - 23397337
Alignment:
| Q |
304 |
aaaacttttctgaatactttattgtttatgttactttattgctta--tgtgtgtaattattttaactt |
369 |
Q |
| |
|
|||||||||||||||| || ||||| ||||||||||||||| || |||||||||| |||||||||| |
|
|
| T |
23397404 |
aaaacttttctgaatatttcgttgttaatgttactttattgcctatgtgtgtgtaatgattttaactt |
23397337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 616
Target Start/End: Complemental strand, 5353380 - 5353344
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
5353380 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
5353344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 28784835 - 28784871
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
28784835 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
28784871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 428; Significance: 0; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 13 - 544
Target Start/End: Complemental strand, 39949924 - 39949376
Alignment:
| Q |
13 |
tgaatcatgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949924 |
tgaatcatgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
39949825 |
T |
|
| Q |
113 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
212 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949824 |
caatgtaaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
39949725 |
T |
|
| Q |
213 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949724 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtattccagaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
39949625 |
T |
|
| Q |
313 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaagattat-ctgca----------------ca |
395 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| || |
|
|
| T |
39949624 |
ctttatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcacaagtaaggttatctgca |
39949525 |
T |
|
| Q |
396 |
agttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatg |
495 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
39949524 |
agttaagtaggtttatgtcatatgacatcagctaaacataggctgagttattactaagtatttggctataagtatgtaagaaggatgtatggatgatata |
39949425 |
T |
|
| Q |
496 |
tatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949424 |
taaaaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
39949376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 284 - 544
Target Start/End: Complemental strand, 39954045 - 39953768
Alignment:
| Q |
284 |
gtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaag |
383 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954045 |
gtgttgactaattgacctataaaacttttctttatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaa |
39953946 |
T |
|
| Q |
384 |
attat-ctgcacaagt----------------taagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataa |
466 |
Q |
| |
|
| ||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||| |
|
|
| T |
39953945 |
actatgctgcacaagtaaggttatctgcaagttaagtaggtttatgtcatatgacatcagctaaacatagactgagttattactaagtatttggctataa |
39953846 |
T |
|
| Q |
467 |
gtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
|||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39953845 |
gtatgtaagaaggatgtatggatgatatataaaaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
39953768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 617
Target Start/End: Complemental strand, 39953732 - 39953695
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39953732 |
gagcttattgcttctgctgccattacaaaagctaacag |
39953695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 616
Target Start/End: Complemental strand, 39949340 - 39949304
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949340 |
gagcttattgcttctgctgccattacaaaagctaaca |
39949304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 415; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 13 - 544
Target Start/End: Complemental strand, 196763 - 196224
Alignment:
| Q |
13 |
tgaatcatgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196763 |
tgaatcatgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatat |
196664 |
T |
|
| Q |
113 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196663 |
caatgtcaaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaa |
196564 |
T |
|
| Q |
213 |
gcacttcctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196563 |
gcacttcctagtgccaagttcatggagctaagaagcaagctaggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaactttt |
196464 |
T |
|
| Q |
313 |
ctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgca |
393 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||| |
|
|
| T |
196463 |
ctgaa-----------ttatgttactttattgtttatgtgtgtaatcattttaacttgttttgttagtaaaactatgctgcacaagtaaggttatctgca |
196375 |
T |
|
| Q |
394 |
caagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggta |
493 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196374 |
cgagttaagtaggtttacgtcatatgacatcagctaagcataggctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatggta |
196275 |
T |
|
| Q |
494 |
tgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
196274 |
tgtatcaaatttgcagcatagtaaacattgttattgtctctttctcttcca |
196224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 283 - 544
Target Start/End: Complemental strand, 200872 - 200603
Alignment:
| Q |
283 |
agtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
200872 |
agtgttgactaattgacctataaaacttttctgaat-----------tatgttactttattgtttatgtgtgtaatcattttaacttgttttgttagtaa |
200784 |
T |
|
| Q |
383 |
ga-------------------ttatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggcta |
463 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
200783 |
aactatgctgcacaagtaaggttatctgcacaagttaagtaggtttacctcatatgacatcagctaagcataggctgagtcattactaagtatttggcta |
200684 |
T |
|
| Q |
464 |
taagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
200683 |
taagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
200603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 618
Target Start/End: Complemental strand, 196188 - 196150
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacaga |
618 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196188 |
gagcttattgcttctgctgccattacaaaagctaacaga |
196150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 617
Target Start/End: Complemental strand, 200574 - 200537
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
200574 |
gagcttattgcttctgctaccattacaaaagctaacag |
200537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 32800639 - 32800675
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
32800639 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
32800675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 173; Significance: 1e-92; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 285 - 544
Target Start/End: Original strand, 1330569 - 1330847
Alignment:
| Q |
285 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaga |
384 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
1330569 |
tgttgactaattgacctataaaacttgtctgaatactttattgtttatgttactctattgcttatgtgtgtaatcattttaacttgttttgttagtaaaa |
1330668 |
T |
|
| Q |
385 |
-------------------ttatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctata |
465 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||| | |||||||| ||||| |
|
|
| T |
1330669 |
ctatactgcacaagtaatgttatctgcacaagttaagtaggtttatgtcatatgacatcagcaaagtataggttgagtcattagtaagtatttgactata |
1330768 |
T |
|
| Q |
466 |
agtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
544 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1330769 |
agtatgtaagaaggatgtaaggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
1330847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 1330883 - 1330919
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1330883 |
gagcttattgtttctgctgccattacaaaagctaaca |
1330919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 45336580 - 45336617
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
45336580 |
gagcttattgcttctgctgcctttgcaaaagctaacag |
45336617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 45338892 - 45338929
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
45338892 |
gagcttattgcttctgctgcctttgcaaaagctaacag |
45338929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1453 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold1453
Description:
Target: scaffold1453; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 437 - 544
Target Start/End: Original strand, 1 - 108
Alignment:
| Q |
437 |
gctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtcccttt |
536 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1 |
gctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtcccttt |
100 |
T |
|
| Q |
537 |
ctcttcca |
544 |
Q |
| |
|
|||||||| |
|
|
| T |
101 |
ctcttcca |
108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1453; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 144 - 181
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaacag |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
144 |
gagcttattgcttctgctgccattacaaaagctaacag |
181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 616
Target Start/End: Original strand, 1550478 - 1550514
Alignment:
| Q |
580 |
gagcttattgcttctgctgccattacaaaagctaaca |
616 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1550478 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
1550514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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