View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5400_high_79 (Length: 251)
Name: NF5400_high_79
Description: NF5400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5400_high_79 |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 39926055 - 39926296
Alignment:
| Q |
1 |
attagtagttactaatctaatcttgaataaaatgcacaaaattaaagtgactcttatttttccacgtcttgcttaggaaaataaagtaaagagtaatgga |
100 |
Q |
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| T |
39926055 |
attagtagttactaatctaatcttgaataaaatgcacaaaattaaagtgactcttatttttccacgtcttgcttaggaaaataaagtaaagagtaatgga |
39926154 |
T |
|
| Q |
101 |
ttggccaacttatctttgcacaattgcaccactgtattatcatttagcagatacgataatcaaaagtttgattattacattacaattctttatatcaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39926155 |
ttggccaacttatctttgcacaattgcaccactgtattatcatttagcagatacgataatcaaaagtttgattattacattacaattctttatatcaatt |
39926254 |
T |
|
| Q |
201 |
attaaagtaataaataataatcatatactacagcagtataat |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
39926255 |
attaaagtaataaataataatcatatactacagcagtataat |
39926296 |
T |
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