View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5400_low_10 (Length: 590)

Name: NF5400_low_10
Description: NF5400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5400_low_10
NF5400_low_10
[»] chr2 (16 HSPs)
chr2 (10-483)||(21560306-21560779)
chr2 (119-449)||(21493241-21493571)
chr2 (484-573)||(15233943-15234032)
chr2 (484-573)||(41252604-41252693)
chr2 (484-573)||(44104546-44104635)
chr2 (488-573)||(35792911-35792996)
chr2 (484-573)||(43040849-43040938)
chr2 (484-571)||(21727862-21727949)
chr2 (499-573)||(41643082-41643156)
chr2 (479-517)||(10112334-10112372)
chr2 (503-572)||(31903400-31903468)
chr2 (479-516)||(43041094-43041131)
chr2 (483-517)||(35793150-35793184)
chr2 (483-517)||(41252414-41252448)
chr2 (484-517)||(10118696-10118729)
chr2 (484-517)||(44104800-44104833)
[»] chr5 (23 HSPs)
chr5 (481-573)||(29875142-29875234)
chr5 (484-573)||(12398946-12399035)
chr5 (482-573)||(23090486-23090577)
chr5 (482-573)||(34208726-34208817)
chr5 (484-573)||(4695162-4695251)
chr5 (484-572)||(42757805-42757892)
chr5 (490-573)||(4145882-4145965)
chr5 (484-573)||(22645909-22645998)
chr5 (206-438)||(33114695-33114927)
chr5 (499-573)||(3077785-3077859)
chr5 (504-564)||(19574883-19574943)
chr5 (481-517)||(42793562-42793598)
chr5 (502-571)||(4939712-4939781)
chr5 (484-517)||(12399190-12399223)
chr5 (484-517)||(23090298-23090331)
chr5 (484-517)||(34208538-34208571)
chr5 (483-516)||(41610372-41610405)
chr5 (113-177)||(33115383-33115447)
chr5 (513-556)||(12096231-12096274)
chr5 (483-517)||(3077596-3077630)
chr5 (484-517)||(4145694-4145727)
chr5 (484-517)||(29874954-29874987)
chr5 (484-517)||(42793040-42793073)
[»] chr7 (34 HSPs)
chr7 (484-573)||(17904351-17904440)
chr7 (482-573)||(46467333-46467424)
chr7 (483-573)||(29890825-29890915)
chr7 (484-573)||(6387692-6387781)
chr7 (484-573)||(37179331-37179420)
chr7 (482-573)||(26770367-26770458)
chr7 (490-573)||(29427170-29427253)
chr7 (482-573)||(31502651-31502741)
chr7 (483-573)||(4405297-4405387)
chr7 (482-573)||(9332509-9332600)
chr7 (483-573)||(6389912-6390002)
chr7 (484-571)||(46690053-46690140)
chr7 (504-554)||(19523813-19523863)
chr7 (502-572)||(31858110-31858180)
chr7 (484-573)||(9876451-9876539)
chr7 (521-572)||(41921892-41921943)
chr7 (502-572)||(48049191-48049261)
chr7 (502-571)||(5514969-5515038)
chr7 (502-571)||(7839246-7839315)
chr7 (483-571)||(9215462-9215550)
chr7 (502-553)||(33974702-33974753)
chr7 (483-545)||(22753067-22753129)
chr7 (483-517)||(29427408-29427442)
chr7 (483-517)||(43701550-43701584)
chr7 (484-517)||(6387936-6387969)
chr7 (502-571)||(12252262-12252331)
chr7 (484-517)||(17904163-17904196)
chr7 (484-517)||(26770179-26770212)
chr7 (484-517)||(29723381-29723414)
chr7 (484-517)||(37179575-37179608)
chr7 (484-517)||(46467579-46467612)
chr7 (484-516)||(29891071-29891103)
chr7 (482-516)||(4405107-4405141)
chr7 (484-517)||(33379211-33379244)
[»] chr3 (32 HSPs)
chr3 (480-573)||(41349367-41349460)
chr3 (482-573)||(39518595-39518686)
chr3 (483-573)||(29014689-29014779)
chr3 (483-573)||(36737833-36737923)
chr3 (484-573)||(18997155-18997244)
chr3 (484-573)||(18999694-18999783)
chr3 (484-573)||(32677477-32677566)
chr3 (484-573)||(1351996-1352085)
chr3 (484-573)||(29371538-29371627)
chr3 (484-573)||(32840137-32840226)
chr3 (484-573)||(39528937-39529026)
chr3 (484-573)||(39806979-39807068)
chr3 (483-573)||(38855505-38855595)
chr3 (485-564)||(22157455-22157534)
chr3 (485-564)||(21974346-21974425)
chr3 (485-564)||(21996777-21996856)
chr3 (498-573)||(28228623-28228701)
chr3 (512-573)||(55367740-55367801)
chr3 (484-571)||(840762-840849)
chr3 (502-571)||(49040862-49040931)
chr3 (482-517)||(29371782-29371817)
chr3 (483-517)||(1352240-1352274)
chr3 (484-517)||(18996967-18997000)
chr3 (484-517)||(18999506-18999539)
chr3 (484-517)||(32677721-32677754)
chr3 (484-517)||(39528749-39528782)
chr3 (484-517)||(41349615-41349648)
chr3 (484-516)||(46878980-46879012)
chr3 (482-517)||(55365906-55365941)
chr3 (484-517)||(28228436-28228469)
chr3 (484-517)||(39807223-39807256)
chr3 (484-517)||(49319347-49319380)
[»] chr1 (23 HSPs)
chr1 (485-573)||(1236071-1236159)
chr1 (483-573)||(46220447-46220537)
chr1 (484-573)||(47669307-47669396)
chr1 (487-573)||(9831691-9831777)
chr1 (486-573)||(3384597-3384684)
chr1 (483-573)||(10737700-10737790)
chr1 (483-573)||(48565005-48565095)
chr1 (484-573)||(8889631-8889720)
chr1 (484-572)||(4055673-4055761)
chr1 (499-573)||(18127038-18127112)
chr1 (484-572)||(39241341-39241429)
chr1 (499-573)||(4817457-4817531)
chr1 (483-571)||(37875726-37875814)
chr1 (482-517)||(4817267-4817302)
chr1 (483-517)||(4055483-4055517)
chr1 (483-517)||(47669118-47669152)
chr1 (484-517)||(9831503-9831536)
chr1 (484-517)||(18126851-18126884)
chr1 (484-517)||(33020206-33020239)
chr1 (533-573)||(7414396-7414436)
chr1 (482-517)||(33023428-33023463)
chr1 (484-517)||(1236274-1236307)
chr1 (484-517)||(46220259-46220292)
[»] chr8 (20 HSPs)
chr8 (484-573)||(33837729-33837818)
chr8 (484-573)||(45334276-45334365)
chr8 (484-573)||(25106399-25106488)
chr8 (484-573)||(28379135-28379224)
chr8 (484-573)||(38495472-38495561)
chr8 (484-573)||(9740174-9740263)
chr8 (483-572)||(13469507-13469596)
chr8 (484-573)||(2508796-2508885)
chr8 (499-572)||(2626253-2626326)
chr8 (481-571)||(32183478-32183568)
chr8 (481-517)||(27027655-27027691)
chr8 (483-517)||(9739984-9740018)
chr8 (483-517)||(27024432-27024466)
chr8 (483-517)||(33837973-33838007)
chr8 (484-517)||(2509040-2509073)
chr8 (484-517)||(45334520-45334553)
chr8 (482-517)||(25106209-25106244)
chr8 (483-517)||(25979003-25979037)
chr8 (499-572)||(27793059-27793131)
chr8 (489-517)||(13469749-13469777)
[»] chr4 (18 HSPs)
chr4 (487-573)||(8955779-8955865)
chr4 (484-573)||(45590930-45591019)
chr4 (485-572)||(39482051-39482138)
chr4 (490-573)||(36971236-36971319)
chr4 (481-573)||(49162276-49162368)
chr4 (484-573)||(30469213-30469302)
chr4 (501-573)||(33288421-33288493)
chr4 (499-573)||(50774073-50774147)
chr4 (483-572)||(18835896-18835985)
chr4 (483-571)||(26025527-26025615)
chr4 (484-573)||(34334520-34334613)
chr4 (483-517)||(19256185-19256219)
chr4 (483-517)||(36016278-36016312)
chr4 (480-517)||(8956020-8956057)
chr4 (484-517)||(19257104-19257137)
chr4 (510-571)||(33108924-33108985)
chr4 (481-517)||(45590739-45590775)
chr4 (483-517)||(30469412-30469446)
[»] chr6 (15 HSPs)
chr6 (484-573)||(32274622-32274711)
chr6 (478-573)||(2543269-2543364)
chr6 (483-573)||(27312113-27312204)
chr6 (483-573)||(5008319-5008409)
chr6 (484-548)||(8504733-8504797)
chr6 (484-572)||(29452542-29452630)
chr6 (483-568)||(7156236-7156321)
chr6 (483-572)||(31170989-31171078)
chr6 (484-571)||(18742136-18742223)
chr6 (483-517)||(27312360-27312394)
chr6 (483-517)||(32274433-32274467)
chr6 (484-517)||(29302515-29302548)
chr6 (482-517)||(12174698-12174733)
chr6 (483-517)||(7156469-7156503)
chr6 (484-517)||(18741947-18741980)
[»] scaffold0103 (1 HSPs)
scaffold0103 (483-571)||(44808-44896)


Alignment Details
Target: chr2 (Bit Score: 450; Significance: 0; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 10 - 483
Target Start/End: Original strand, 21560306 - 21560779
Alignment:
Q  10 attattctcccaagaataagaatcacgaaatgatcgcaaccctaattcgctagtcacaatatgttaatcgaaatagcaatctagagaaagttttctcaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21560306 attattctcccaagaataagaatcacgaaatgatcgcaaccctaattcgctagtcacaatatgttaatcgaaatagctatctagagaaagttttctcaca 21560405  T
Q  110 tttgtgaatgccaagttgataacataggaaaggaattgtccaccagtgatgagaaatccattgagactaacaagtgctcctctaaccctagttggtgaag 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21560406 tttgtgaatgccaagttgataacataggaaaggaattgtccaccagtgatgagaaatccattgagactaacaagtgctcctctaaccctagttggtgaag 21560505  T
Q  210 cttctgagatatataaaggagaagccattgaagccattccaacaccaaaaccaacaaagactctaccaacaatgagaatagctggattgattgcagcagc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21560506 cttctgagatatataaaggagaagccattgaagccattccaacaccaagaccaacaaagactctaccaacaatgagaatagctggatttattgcagcagc 21560605  T
Q  310 cataataactgagccaatgaaaaagagtgcatctgcaagaattattgcttttttccttccaaatcgatcgttgatccatccaccaactgatgcacctatg 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21560606 cataataactgagccaatgaaaaagagtgcatctgcaagaattattgcttttttccttccaaatcgatcgttgatccatccaccaactgatgcacctatg 21560705  T
Q  410 attgctccagcaagtgctgtactcactatggcttcctgttttatcaatattaattaagtaatcattataatata 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||    
T  21560706 attgctccagcaagtgctgtactcactatggcttcctgttttatcaacatcaattaattaatcattataatata 21560779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 119 - 449
Target Start/End: Original strand, 21493241 - 21493571
Alignment:
Q  119 gccaagttgataacataggaaaggaattgtccaccagtgatgagaaatccattgagactaacaagtgctcctctaaccctagttggtgaagcttctgaga 218  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| |  |||||||||||||| || |||||||| | |||||||||||| || ||||    
T  21493241 gccaagttgatgagataggaaaggaactgtccaccagtgatgagaaaactgttgagactaacaagagcacctctaactcgagttggtgaagcctcagaga 21493340  T
Q  219 tatataaaggagaagccattgaagccattccaacaccaaaaccaacaaagactctaccaacaatgagaatagctggattgattgcagcagccataataac 318  Q
    | || |||||||| |||||||||||||| || ||||||| ||||||||| |||| ||||||||||||| ||||||||||    ||||||||||  ||||     
T  21493341 tgtacaaaggagatgccattgaagccatcccgacaccaagaccaacaaatactcgaccaacaatgagagtagctggatttggagcagcagccaagataat 21493440  T
Q  319 tgagccaatgaaaaagagtgcatctgcaagaattattgcttttttccttccaaatcgatcgttgatccatccaccaactgatgcacctatgattgctcca 418  Q
    ||| || |  |||||||| | |||||||| |||||||| |  ||| |||||||| | ||| ||||||||||| |||| ||  || || || |||||||||    
T  21493441 tgaccctagtaaaaagagggtatctgcaacaattattgatacttttcttccaaacctatcattgatccatcctccaattgcagctccaataattgctcca 21493540  T
Q  419 gcaagtgctgtactcactatggcttcctgtt 449  Q
    |||| ||||||||||||||||||||||||||    
T  21493541 gcaattgctgtactcactatggcttcctgtt 21493571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 15234032 - 15233943
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  15234032 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtatatttttt 15233943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 41252693 - 41252604
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41252693 tactctctccattcattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 41252604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 44104546 - 44104635
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44104546 tactccctccattccttttcttttgatgttttaacttttgacataagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 44104635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 488 - 573
Target Start/End: Original strand, 35792911 - 35792996
Alignment:
Q  488 ccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  35792911 cccttcattccttttcttttgatgttttaactcttgacataagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 35792996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 43040849 - 43040938
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  43040849 tactccctccattccttttcttttgatgttttagctattggcacaagttttaaggagtaattaaaatatataaatatttgtgtgattttt 43040938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 571
Target Start/End: Complemental strand, 21727949 - 21727862
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    |||||||||| ||  || |||||||||||||||||||||| ||||||| ||||||||||||| || |||||||| |||||| ||||||    
T  21727949 tactccctccgttttttatcttttgatgttttagctcttggcacaagtcttaaggagtaattgaagtatataaatatttgtatgtttt 21727862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 573
Target Start/End: Complemental strand, 41643156 - 41643082
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||  ||||| ||||  |||||| ||||||||||| |||||||| |||||||||||||||    
T  41643156 ttttcttttgatgttttaattcttggcacacattttaaagagtaattaaagtatataaatatttgtgtgtttttt 41643082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 479 - 517
Target Start/End: Original strand, 10112334 - 10112372
Alignment:
Q  479 atatatactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10112334 atatatactccctccattccttttcttttgatgttttag 10112372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 572
Target Start/End: Original strand, 31903400 - 31903468
Alignment:
Q  503 cttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||||||||||||||| ||| ||| | |||||||||||||||||| ||||| || ||||||||||||||    
T  31903400 cttttgatgttttagcttttggcacgacttttaaggagtaattaaagtatat-aatatttgtgtgttttt 31903468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 516
Target Start/End: Complemental strand, 43041131 - 43041094
Alignment:
Q  479 atatatactccctccattccttttcttttgatgtttta 516  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43041131 atatatactccctccattccttttcttttgatgtttta 43041094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 35793184 - 35793150
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||| |||||||||||||||||||    
T  35793184 atactccctccattctttttcttttgatgttttag 35793150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 41252414 - 41252448
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||| |||||||||    
T  41252414 atactccctccattccttttctttttatgttttag 41252448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 10118729 - 10118696
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||| ||||||    
T  10118729 tactccctccattccttttcttttgatattttag 10118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 44104833 - 44104800
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    |||||||||| |||||||||||||||||||||||    
T  44104833 tactccctccgttccttttcttttgatgttttag 44104800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 481 - 573
Target Start/End: Complemental strand, 29875234 - 29875142
Alignment:
Q  481 atatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29875234 atatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 29875142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 12398946 - 12399035
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  12398946 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 12399035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 482 - 573
Target Start/End: Complemental strand, 23090577 - 23090486
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  23090577 tatactccctccattccttttcttttgatgttttacctcttgacacaagttttaaggagtaattaaagtatacaaacatttgtgtatttttt 23090486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 482 - 573
Target Start/End: Complemental strand, 34208817 - 34208726
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  34208817 tatactccctccattcctttttttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 34208726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 4695162 - 4695251
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4695162 tactccctccatttcttttcttttgatgttatagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 4695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 484 - 572
Target Start/End: Original strand, 42757805 - 42757892
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  42757805 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaac-gttgtgtgttttt 42757892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 490 - 573
Target Start/End: Complemental strand, 4145965 - 4145882
Alignment:
Q  490 ctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  4145965 ctccattccttttcttttgatgttttagttcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 4145882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 22645909 - 22645998
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  22645909 tactccctcaatttcttttcttttaatgttttagctcttggcacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttt 22645998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 206 - 438
Target Start/End: Complemental strand, 33114927 - 33114695
Alignment:
Q  206 gaagcttctgagatatataaaggagaagccattgaagccattccaacaccaaaaccaacaaagactctaccaacaatgagaatagctggattgattgcag 305  Q
    ||||||||||| || || |  |||||||||||||||||||||||||||||||  || ||||| || |  || || ||||||||||| ||  || ||||||    
T  33114927 gaagcttctgaaatgtacagtggagaagccattgaagccattccaacaccaagtccgacaaaaacacggcccacgatgagaatagcagggctggttgcag 33114828  T
Q  306 cagccataataactgagccaatgaaaaagagtgcatctgcaagaattattgcttttttccttccaaatcgatcgttgatccatccaccaactgatgcacc 405  Q
    ||||||| ||| | || || || |||||||| | ||||||||  || |||| | |||||||||| |||||||| || ||||| ||||||||||  |||||    
T  33114827 cagccatgatagcagaccctataaaaaagagggtatctgcaatcataattgatcttttccttccgaatcgatcattaatccagccaccaactgcagcacc 33114728  T
Q  406 tatgattgctccagcaagtgctgtactcactat 438  Q
    ||| | |||||||||||||   |||||||||||    
T  33114727 tattactgctccagcaagtaaagtactcactat 33114695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 573
Target Start/End: Complemental strand, 3077859 - 3077785
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  3077859 ttttttttttatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 3077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 19574943 - 19574883
Alignment:
Q  504 ttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgt 564  Q
    ||||||||||||| |||||| ||||||| ||||| |||||||||| |||||||| ||||||    
T  19574943 ttttgatgttttaactcttggcacaagtcttaagaagtaattaaagtatataaatatttgt 19574883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 42793598 - 42793562
Alignment:
Q  481 atatactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||||    
T  42793598 atatactccctccattccttttcttttgatgttttag 42793562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 4939781 - 4939712
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||||||| ||||||||| |||| ||||  |||||||||| |||||||  |||||| ||||||    
T  4939781 tcttttgatgttttaactcttgacataagtcttaataagtaattaaaatatataagtatttgtatgtttt 4939712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 12399223 - 12399190
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  12399223 tactccctccattccttttcttttgatgttttag 12399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 23090298 - 23090331
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  23090298 tactccctccattccttttcttttgatgttttag 23090331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 34208538 - 34208571
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  34208538 tactccctccattccttttcttttgatgttttag 34208571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 516
Target Start/End: Original strand, 41610372 - 41610405
Alignment:
Q  483 atactccctccattccttttcttttgatgtttta 516  Q
    ||||||||||||||||||||||||||||||||||    
T  41610372 atactccctccattccttttcttttgatgtttta 41610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 33115447 - 33115383
Alignment:
Q  113 gtgaatgccaagttgataacataggaaaggaattgtccaccagtgatgagaaatccattgagact 177  Q
    ||||| ||||||||||| | |||||| || |||||||| |||||||||||||| || ||||||||    
T  33115447 gtgaaggccaagttgatgagataggagagaaattgtcccccagtgatgagaaaaccgttgagact 33115383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 556
Target Start/End: Original strand, 12096231 - 12096274
Alignment:
Q  513 tttagctcttgacacaagttttaaggagtaattaaattatataa 556  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||    
T  12096231 tttagctcttgacacaagacttaaggagtaattaaatcatataa 12096274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 3077596 - 3077630
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||| |||||||||||||||||||    
T  3077596 atactccctccattcattttcttttgatgttttag 3077630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 4145694 - 4145727
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||| ||||||||||||||||||||||||||||    
T  4145694 tactcgctccattccttttcttttgatgttttag 4145727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 29874954 - 29874987
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||| |||||||||||||||||||    
T  29874954 tactccctccattctttttcttttgatgttttag 29874987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 42793040 - 42793073
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||| ||||||||||||||||||||||||||||    
T  42793040 tactcactccattccttttcttttgatgttttag 42793073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 8e-41; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 17904440 - 17904351
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17904440 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 17904351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 482 - 573
Target Start/End: Original strand, 46467333 - 46467424
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  46467333 tatactccctccattccttttcttttgatgttttaactcttgacacaaattttaaggagtaattaaagtatataaacatttgtgtgtttttt 46467424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 29890825 - 29890915
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  29890825 atactccctccattccttttcttttgatgttttagcttttgacacaagttttaaggagtaattaaagtatataaacacttgtgtgtttttt 29890915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 6387692 - 6387781
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6387692 tacttcctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 6387781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 37179331 - 37179420
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  37179331 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaatgaaagtatatagacatttgtgtgtttttt 37179420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 482 - 573
Target Start/End: Complemental strand, 26770458 - 26770367
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26770458 tatactccctccattcattttcttttgatgttttaattcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 26770367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 490 - 573
Target Start/End: Original strand, 29427170 - 29427253
Alignment:
Q  490 ctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29427170 ctccattcattttcttttgatgttttacctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 29427253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 482 - 573
Target Start/End: Original strand, 31502651 - 31502741
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  31502651 tatactccctccattc-ttttcttttgatgttttagctcttgatgcaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 31502741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 4405387 - 4405297
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  4405387 atactccctccattccttttcttttgatgttttagctattggcacaagttttaaggagtaattaaaatatataaatatttgtgtgattttt 4405297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 482 - 573
Target Start/End: Complemental strand, 9332600 - 9332509
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  9332600 tatactccctccatttcttttcttttgatattttagctcttaacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 9332509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 6390002 - 6389912
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  6390002 atactccctcaattctttttcttttgatgttttaactcttgacacaagttttaagaagtagttaaagtatataaatatttgtgtgtttttt 6389912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 571
Target Start/End: Complemental strand, 46690140 - 46690053
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    |||||||||||||  || |||||||||||||||||||||| ||||| | |||||||||||||||| |||||||| |||||| ||||||    
T  46690140 tactccctccattttttatcttttgatgttttagctcttggcacaaatcttaaggagtaattaaagtatataaatatttgtatgtttt 46690053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 19523813 - 19523863
Alignment:
Q  504 ttttgatgttttagctcttgacacaagttttaaggagtaattaaattatat 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19523813 ttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatat 19523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 502 - 572
Target Start/End: Original strand, 31858110 - 31858180
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||  |||||||||||||| |||||||    
T  31858110 tcttttgatgttttaactcttgacacaaatcttaaggagtaattaaagaatataaacatttgtatgttttt 31858180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 9876539 - 9876451
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| ||||||||| |||| |||| ||||||||||| ||| || ||||||||||||||||||||| |||||||| ||||||||| |||||    
T  9876539 tacttcctccattctttttttttt-atgttttagctattggcataagttttaaggagtaattaaaatatataaatatttgtgtgattttt 9876451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 521 - 572
Target Start/End: Original strand, 41921892 - 41921943
Alignment:
Q  521 ttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  41921892 ttgacacaagttttaaggagtaattaaagtatataaacatttgtgttttttt 41921943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 572
Target Start/End: Complemental strand, 48049261 - 48049191
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||| |||| ||| |||||| |||||||    
T  48049261 tcttttgatgttttagctcttggcacaagtcttaagtagtaattaaagtatagaaatatttgtatgttttt 48049191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 5515038 - 5514969
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||| |||||||||||||||||| |||| || |||||||| |||| ||| |||||| ||||||    
T  5515038 tcttttgatgtattagctcttgacacaagtcttaatgaataattaaaatataaaaatatttgtatgtttt 5514969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 7839315 - 7839246
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||| |||||||| ||  ||||||| |||||||||||||||| |||||||| |||||| ||||||    
T  7839315 tcttttgatattttagctgttatcacaagtattaaggagtaattaaagtatataaatatttgtatgtttt 7839246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 571
Target Start/End: Original strand, 9215462 - 9215550
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    |||||||||| |||  || ||||||||||||||||||||||  |||| | ||||| |||||||||| || ||||| |||||| ||||||    
T  9215462 atactccctctattttttatcttttgatgttttagctcttggtacaaatcttaagaagtaattaaagtacataaatatttgtatgtttt 9215550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 33974753 - 33974702
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattata 553  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||| ||||    
T  33974753 tcttttgacgttttagctcttggcacaagtcttaaggagtaattaaagtata 33974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 22753067 - 22753129
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaatt 545  Q
    |||||||||||||| ||| | |||||||||||||| ||| ||||||||| |||| ||||||||    
T  22753067 atactccctccatttcttatattttgatgttttagttctggacacaagtcttaatgagtaatt 22753129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 29427442 - 29427408
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  29427442 atactccctccattccttttcttttgatgttttag 29427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 43701550 - 43701584
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  43701550 atactccctccattccttttcttttgatgttttag 43701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 6387969 - 6387936
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  6387969 tactccctccattccttttcttttgatgttttag 6387936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 12252331 - 12252262
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||||||| | |||| ||||||| |||||||||||||||  |||| ||| |||||| ||||||    
T  12252331 tcttttgatgttttaacacttggcacaagtcttaaggagtaattaatgtatagaaatatttgtatgtttt 12252262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 17904163 - 17904196
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  17904163 tactccctccattccttttcttttgatgttttag 17904196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 26770179 - 26770212
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  26770179 tactccctccattccttttcttttgatgttttag 26770212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 29723414 - 29723381
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  29723414 tactccctccattccttttcttttgatgttttag 29723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 37179608 - 37179575
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  37179608 tactccctccattccttttcttttgatgttttag 37179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 46467612 - 46467579
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  46467612 tactccctccattccttttcttttgatgttttag 46467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 29891103 - 29891071
Alignment:
Q  484 tactccctccattccttttcttttgatgtttta 516  Q
    |||||||||||||||||||||||||||||||||    
T  29891103 tactccctccattccttttcttttgatgtttta 29891071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 516
Target Start/End: Original strand, 4405107 - 4405141
Alignment:
Q  482 tatactccctccattccttttcttttgatgtttta 516  Q
    ||||||||||||||| |||||||||||||||||||    
T  4405107 tatactccctccatttcttttcttttgatgtttta 4405141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 33379244 - 33379211
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||| ||||||||||||||||||||    
T  33379244 tactccctccatttcttttcttttgatgttttag 33379211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 8e-41; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 480 - 573
Target Start/End: Original strand, 41349367 - 41349460
Alignment:
Q  480 tatatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  41349367 tatatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 41349460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 482 - 573
Target Start/End: Complemental strand, 39518686 - 39518595
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39518686 tatactccctccattccttttcttttgatgttttagctcttgacacaagttttaatgagtaattaaagtatataaacatttgtgtgtttttt 39518595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 29014689 - 29014779
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  29014689 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaagaagtaattaaagtatataaacatttgtgtgtttttt 29014779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 36737833 - 36737923
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  36737833 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggaataattaaagtatataaacatttgtgtgtttttt 36737923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 18997244 - 18997155
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18997244 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgcgtttttt 18997155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 18999783 - 18999694
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18999783 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgcgtttttt 18999694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 32677477 - 32677566
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32677477 tactccctccattcattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 32677566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 1351996 - 1352085
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  1351996 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 1352085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 29371538 - 29371627
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  29371538 tactccctccattcattttcttttgatgttttagctcttgacacaaattttaaggagtaattaaagtatataaacatttgtgtgtttttt 29371627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 32840226 - 32840137
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32840226 tactccctccattcattttcttttgatattttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 32840137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 39529026 - 39528937
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  39529026 tactccctccattccttttcttttgatgttttagcttttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 39528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 39806979 - 39807068
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  39806979 tactcccttcattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 39807068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 38855595 - 38855505
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  38855595 atactccctccattccttttcttttgatgttttagctattggcacaagttttaaggagtaattaaaatatataaatatttgtgtgattttt 38855505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 22157534 - 22157455
Alignment:
Q  485 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgt 564  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  22157534 actccctccatttattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgt 22157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 21974425 - 21974346
Alignment:
Q  485 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgt 564  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  21974425 actccctccatttattttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgt 21974346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 21996856 - 21996777
Alignment:
Q  485 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgt 564  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  21996856 actccctccatttattttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgt 21996777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 573
Target Start/End: Complemental strand, 28228701 - 28228623
Alignment:
Q  498 cttttcttttgatgttttagctcttgacacaagttttaaggagta---attaaattatataaacatttgtgtgtttttt 573  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||   |||||| ||||||||||||||||||||||||    
T  28228701 ctttttttttgatgttttggctcttgacacaagttttaagaagtaattattaaagtatataaacatttgtgtgtttttt 28228623  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 512 - 573
Target Start/End: Complemental strand, 55367801 - 55367740
Alignment:
Q  512 ttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  55367801 ttttagctcttgatacaagttttaaggagtaattaaagtatataaatatttgtgtatttttt 55367740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 571
Target Start/End: Complemental strand, 840849 - 840762
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    |||||||||||||  || ||||||||||||||| |||||| ||||||| ||||| | |||||||| |||| ||| |||||| ||||||    
T  840849 tactccctccattttttatcttttgatgttttaactcttggcacaagtcttaagaaataattaaagtatagaaaaatttgtatgtttt 840762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 571
Target Start/End: Original strand, 49040862 - 49040931
Alignment:
Q  502 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||||||||||| || ||||||| || |||||||||||| ||||| ||| |||||| ||||||    
T  49040862 tcttttgatgttttagctcctggcacaagtcttgaggagtaattaagttatagaaatatttgtatgtttt 49040931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 517
Target Start/End: Complemental strand, 29371817 - 29371782
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||||    
T  29371817 tatactccctccattccttttcttttgatgttttag 29371782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 1352274 - 1352240
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  1352274 atactccctccattccttttcttttgatgttttag 1352240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 18996967 - 18997000
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  18996967 tactccctccattccttttcttttgatgttttag 18997000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 18999506 - 18999539
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  18999506 tactccctccattccttttcttttgatgttttag 18999539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 32677754 - 32677721
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  32677754 tactccctccattccttttcttttgatgttttag 32677721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 39528749 - 39528782
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  39528749 tactccctccattccttttcttttgatgttttag 39528782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 41349648 - 41349615
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  41349648 tactccctccattccttttcttttgatgttttag 41349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 46879012 - 46878980
Alignment:
Q  484 tactccctccattccttttcttttgatgtttta 516  Q
    |||||||||||||||||||||||||||||||||    
T  46879012 tactccctccattccttttcttttgatgtttta 46878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 517
Target Start/End: Original strand, 55365906 - 55365941
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttag 517  Q
    |||||||||| |||||||||||||||||||||||||    
T  55365906 tatactcccttcattccttttcttttgatgttttag 55365941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 28228436 - 28228469
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||| ||||||||||||||||||||||||||||    
T  28228436 tactctctccattccttttcttttgatgttttag 28228469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 39807256 - 39807223
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    |||| |||||||||||||||||||||||||||||    
T  39807256 tacttcctccattccttttcttttgatgttttag 39807223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 49319347 - 49319380
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    |||| |||||||||||||||||||||||||||||    
T  49319347 tacttcctccattccttttcttttgatgttttag 49319380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 485 - 573
Target Start/End: Original strand, 1236071 - 1236159
Alignment:
Q  485 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1236071 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt 1236159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 46220537 - 46220447
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  46220537 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 46220447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 47669396 - 47669307
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  47669396 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 47669307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 487 - 573
Target Start/End: Complemental strand, 9831777 - 9831691
Alignment:
Q  487 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  9831777 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 9831691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 486 - 573
Target Start/End: Original strand, 3384597 - 3384684
Alignment:
Q  486 ctccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3384597 ctccctccattctttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacgtttgtgtgtttttt 3384684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 10737700 - 10737790
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  10737700 atactccctccattccttttcttttgatgttttagctcttgatacaagttttaaggagcaattaaagtatataaatatttgtgtgtttttt 10737790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 48565095 - 48565005
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  48565095 atactccctccattccttttcttttgatgttttggcttttgacacaagttttaaggagtaattaaagtatataaacacttgtgtgtttttt 48565005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 8889720 - 8889631
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  8889720 tactccctccattccttttattttgatgttttagctcttgacacaagttttaagaagtaattaaagtatatatacatttgtgtgtttttt 8889631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 484 - 572
Target Start/End: Complemental strand, 4055761 - 4055673
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4055761 tactcccttcgttctttttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtgttttt 4055673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 499 - 573
Target Start/End: Complemental strand, 18127112 - 18127038
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18127112 tttttttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtgtttt 18127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 572
Target Start/End: Complemental strand, 39241429 - 39241341
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||| ||||||||||||||    
T  39241429 tactctctccatttcttttcttttgatgttttagctcttgacataaattttaagaagtaattaaagtatataaatatttgtgtgttttt 39241341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 573
Target Start/End: Complemental strand, 4817531 - 4817457
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  4817531 ttttttttttatgttttaactcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtgtttt 4817457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 483 - 571
Target Start/End: Original strand, 37875726 - 37875814
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||  |||| ||| |||||| ||||||    
T  37875726 atactccctccatttcttttcttttgatgttttagctcttggcacaagtcttaaggaataattaatgtatagaaatatttgtatgtttt 37875814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 517
Target Start/End: Original strand, 4817267 - 4817302
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||||    
T  4817267 tatactccctccattccttttcttttgatgttttag 4817302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 4055483 - 4055517
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  4055483 atactccctccattccttttcttttgatgttttag 4055517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 47669118 - 47669152
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  47669118 atactccctccattccttttcttttgatgttttag 47669152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 9831503 - 9831536
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  9831503 tactccctccattccttttcttttgatgttttag 9831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 18126851 - 18126884
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  18126851 tactccctccattccttttcttttgatgttttag 18126884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 33020206 - 33020239
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  33020206 tactccctccattccttttcttttgatgttttag 33020239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 533 - 573
Target Start/End: Complemental strand, 7414436 - 7414396
Alignment:
Q  533 ttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  7414436 ttaaggagtaattaaagtatataaatatttgtgtgtttttt 7414396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 517
Target Start/End: Complemental strand, 33023463 - 33023428
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||| |||||||    
T  33023463 tatactccctccattccttttcttttgacgttttag 33023428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 1236307 - 1236274
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||| |||||||||||||||||||    
T  1236307 tactccctccattcattttcttttgatgttttag 1236274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 46220259 - 46220292
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||| ||||||||||||||||||||||||    
T  46220259 tactccctctattccttttcttttgatgttttag 46220292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 33837729 - 33837818
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  33837729 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 33837818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 45334276 - 45334365
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  45334276 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 45334365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 25106488 - 25106399
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  25106488 tactccctccattccttttcttttgatgttttagcttttgacacaagttttaaggagtaattaaagtatataaacacttgtgtgtttttt 25106399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 28379224 - 28379135
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  28379224 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtgattaaagtatataaacatttgtgcgtttttt 28379135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 38495472 - 38495561
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38495472 tactccctccattcattttcttttgatgttttagctcttgacataagttttaaggagtaattaaaatatataaacatttgtgtgtttttt 38495561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 9740263 - 9740174
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  9740263 tactccctccattccttttcttttgatgttttaactcttgacacaagttttagggagtaattaaagtatataaacatttgtgtttttttt 9740174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 572
Target Start/End: Original strand, 13469507 - 13469596
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  13469507 atactccttccattccttttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtgttttt 13469596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 2508796 - 2508885
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2508796 tactccatcaatttcttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 2508885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 572
Target Start/End: Original strand, 2626253 - 2626326
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2626253 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttt 2626326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 481 - 571
Target Start/End: Original strand, 32183478 - 32183568
Alignment:
Q  481 atatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||||||||  || |||||||||||||||||||||| ||||||| ||||||||||||||||  ||| ||| |||||| ||||||    
T  32183478 atatactccctccattttttatcttttgatgttttagctcttggcacaagtcttaaggagtaattaaagcatagaaatatttgtatgtttt 32183568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 27027691 - 27027655
Alignment:
Q  481 atatactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||||    
T  27027691 atatactccctccattccttttcttttgatgttttag 27027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 9739984 - 9740018
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  9739984 atactccctccattccttttcttttgatgttttag 9740018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 27024432 - 27024466
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  27024432 atactccctccattccttttcttttgatgttttag 27024466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 33838007 - 33837973
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  33838007 atactccctccattccttttcttttgatgttttag 33837973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 2509073 - 2509040
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  2509073 tactccctccattccttttcttttgatgttttag 2509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 45334553 - 45334520
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  45334553 tactccctccattccttttcttttgatgttttag 45334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 517
Target Start/End: Original strand, 25106209 - 25106244
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttag 517  Q
    ||||||| ||||||||||||||||||||||||||||    
T  25106209 tatactctctccattccttttcttttgatgttttag 25106244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 25979037 - 25979003
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||| ||||||||||||||||||||    
T  25979037 atactccctccatttcttttcttttgatgttttag 25979003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 572
Target Start/End: Original strand, 27793059 - 27793131
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||| |||| |||||||| |||| |||| |||||||||||| |||||||  ||||| ||||||||||| |||||    
T  27793059 ttttttttttatgttttacctctggacataagttttaaggaataattaatgtatat-aacatttgtgtattttt 27793131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 517
Target Start/End: Complemental strand, 13469777 - 13469749
Alignment:
Q  489 cctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||    
T  13469777 cctccattccttttcttttgatgttttag 13469749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 487 - 573
Target Start/End: Original strand, 8955779 - 8955865
Alignment:
Q  487 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  8955779 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 8955865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 45591019 - 45590930
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  45591019 tactccctccattcattttcttttgatgttttagctcttgacataagttgtaaggagtaattaaagtatataaacatttgtgtgtttttt 45590930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 485 - 572
Target Start/End: Complemental strand, 39482138 - 39482051
Alignment:
Q  485 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  39482138 actccctccatttcttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtattttt 39482051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 490 - 573
Target Start/End: Complemental strand, 36971319 - 36971236
Alignment:
Q  490 ctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  36971319 ctccattcattttcttttgatgttttagcttttgacacaagttttaagaagtaattaaagtatataaacatttgtgtgtttttt 36971236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 481 - 573
Target Start/End: Complemental strand, 49162368 - 49162276
Alignment:
Q  481 atatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||| ||||||||| |||||    
T  49162368 atatactccctccattccctttcttttgatgttttagctattggcacaagttttaaagagtaattaaagtatataaatatttgtgtgattttt 49162276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 573
Target Start/End: Original strand, 30469213 - 30469302
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  30469213 tactcccttcatttcttttcttttgatgttttaactcttgacacaagttttaagaagtaattaaagtatataaatatttgtgtatttttt 30469302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 501 - 573
Target Start/End: Original strand, 33288421 - 33288493
Alignment:
Q  501 ttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  33288421 ttcttttgatgttttagctattgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 33288493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 50774073 - 50774147
Alignment:
Q  499 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  50774073 ttttttttttatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttt 50774147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 572
Target Start/End: Complemental strand, 18835985 - 18835896
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||||| ||||||  |||| ||||||||||||| || ||  ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  18835985 atactccttccatttattttattttgatgttttatcttttcgcacaaattttaaggagtaattaaaatatataaatatttgtgtgttttt 18835896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 483 - 571
Target Start/End: Original strand, 26025527 - 26025615
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||| ||  || |||||||||||||||||||||| ||||||| ||| |||||||||||| |||| ||| |||||| ||||||    
T  26025527 atactccctccgttttttatcttttgatgttttagctcttggcacaagtcttagggagtaattaaagtatagaaatatttgtatgtttt 26025615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 34334613 - 34334520
Alignment:
Q  484 tactccctccattcctttt-cttttgatgttttagctcttgacacaagttttaaggagtaattaaattat---ataaacatttgtgtgtttttt 573  Q
    ||||||||||||||||||| ||||||||| || | ||||| |||||||| |||||||||||||||| |||   |||||||||||| ||||||||    
T  34334613 tactccctccattcctttttcttttgatgattaaactcttaacacaagtcttaaggagtaattaaagtatataataaacatttgtatgtttttt 34334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 19256185 - 19256219
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  19256185 atactccctccattccttttcttttgatgttttag 19256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 36016278 - 36016312
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  36016278 atactccctccattccttttcttttgatgttttag 36016312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 517
Target Start/End: Complemental strand, 8956057 - 8956020
Alignment:
Q  480 tatatactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  8956057 tatatactccctccattcctttttttttgatgttttag 8956020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 19257137 - 19257104
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  19257137 tactccctccattccttttcttttgatgttttag 19257104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 571
Target Start/End: Original strand, 33108924 - 33108985
Alignment:
Q  510 tgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||| |||||||||||||| ||||| | ||||||||||||||||| |||| | ||||||    
T  33108924 tgttttaactcttgacacaagtcttaagaaataattaaattatataaatatttctatgtttt 33108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 517
Target Start/End: Original strand, 45590739 - 45590775
Alignment:
Q  481 atatactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45590739 atatactccctccattcattttcttttgatgttttag 45590775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 30469446 - 30469412
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    ||||||||| |||||||||||||||||||||||||    
T  30469446 atactcccttcattccttttcttttgatgttttag 30469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 5e-36; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 573
Target Start/End: Complemental strand, 32274711 - 32274622
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  32274711 tactccctccattcattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttt 32274622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 478 - 573
Target Start/End: Complemental strand, 2543364 - 2543269
Alignment:
Q  478 aatatatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  2543364 aatacatactccctccattcgttttcttttgatgttttagctcttgacacaagttttaagaagtaattaaagtatataaacatctgtgtgtttttt 2543269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 27312113 - 27312204
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctctt-gacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  27312113 atactccctccattccttttcttttgatgttttagctcttagacacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttt 27312204  T

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Target: chr6; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 5008409 - 5008319
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttttt 573  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  5008409 atactcctttcattccttttcttttgatgttttagctcttaacacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttt 5008319  T

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Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 484 - 548
Target Start/End: Original strand, 8504733 - 8504797
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaa 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8504733 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaa 8504797  T

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Target: chr6; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 572
Target Start/End: Original strand, 29452542 - 29452630
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    ||||||||| |||  |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  29452542 tactccctctatttattttcttttgatgttttaactcttggcacaagttttaaggagtaattaaagtatataaatatttgtgtgttttt 29452630  T

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Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 7156236 - 7156321
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgt 568  Q
    |||| |||||| || |||| |||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  7156236 ataccccctccgtttctttgcttttgatgttttagctcttgatacaagttttaaggaataattaaagtatataaatatttgtgtgt 7156321  T

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Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 572
Target Start/End: Original strand, 31170989 - 31171078
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgttttt 572  Q
    |||||||||||||| ||||||||||||| |||||| ||||  ||||| |||||||||||||||||| |||||||| |||||||| |||||    
T  31170989 atactccctccatttcttttcttttgatattttagttcttagcacaaattttaaggagtaattaaagtatataaatatttgtgtattttt 31171078  T

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Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 571
Target Start/End: Complemental strand, 18742223 - 18742136
Alignment:
Q  484 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||| |||||||  |||| ||| |||||||||||||    
T  18742223 tactccctccatttcttttcttttgatgttttacctcttggcacaagtcttaaggaataattaatgtataaaaatatttgtgtgtttt 18742136  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 27312394 - 27312360
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  27312394 atactccctccattccttttcttttgatgttttag 27312360  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 517
Target Start/End: Original strand, 32274433 - 32274467
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||||||||||||    
T  32274433 atactccctccattccttttcttttgatgttttag 32274467  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 29302548 - 29302515
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||||||||||||||||||||||||    
T  29302548 tactccctccattccttttcttttgatgttttag 29302515  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 517
Target Start/End: Original strand, 12174698 - 12174733
Alignment:
Q  482 tatactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||||||||||||||| |||||||||    
T  12174698 tatactccctccattccttttcttttaatgttttag 12174733  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 7156503 - 7156469
Alignment:
Q  483 atactccctccattccttttcttttgatgttttag 517  Q
    |||||||||||||| ||||||||||||||||||||    
T  7156503 atactccctccatttcttttcttttgatgttttag 7156469  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Original strand, 18741947 - 18741980
Alignment:
Q  484 tactccctccattccttttcttttgatgttttag 517  Q
    ||||||||||||| ||||||||||||||||||||    
T  18741947 tactccctccatttcttttcttttgatgttttag 18741980  T

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Target: scaffold0103 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 483 - 571
Target Start/End: Complemental strand, 44896 - 44808
Alignment:
Q  483 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaattatataaacatttgtgtgtttt 571  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  44896 atactctctacattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtttttt 44808  T

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