View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5402-Insertion-7 (Length: 273)
Name: NF5402-Insertion-7
Description: NF5402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5402-Insertion-7 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 12609255 - 12609522
Alignment:
| Q |
8 |
agccacacacgtgcaaaaagtaagtattaagccagtgatttgcatagttaccttgtatatattgatttgatggttgataactactttcaaattttcaatt |
107 |
Q |
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| T |
12609255 |
agccacacacgtgcaaaaagtaagtattaagccagtgatttgcatagttaccttgtatatattgatttgatggttgataactactttcaaattttcaatt |
12609354 |
T |
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| Q |
108 |
tgtgattagtacagagcttgaaagattttgtagtagagccaccatattgtttttctgaatttctaaggaccaccatattagtttctgagtatatagaac- |
206 |
Q |
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| T |
12609355 |
tgtgattagtacagagcttgaaagattttgtagtagagccaccatattgtttttctgaatttctaaggaccaccatattagtttctgagtatatagaacc |
12609454 |
T |
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| Q |
207 |
-tatttatgtttt--atagtcat--caactaaattcac-aatgc-tcatgcagttta-tgaaaactaa |
266 |
Q |
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| T |
12609455 |
taatttatgtttttaatagtcattcaaactaaattcacaaatgcttcatgcagtttattgaaaactaa |
12609522 |
T |
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