View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5404_high_2 (Length: 694)

Name: NF5404_high_2
Description: NF5404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5404_high_2
NF5404_high_2
[»] chr1 (47 HSPs)
chr1 (1-638)||(695618-696256)
chr1 (451-638)||(15085734-15085921)
chr1 (168-451)||(663564-663856)
chr1 (451-638)||(32083040-32083227)
chr1 (451-638)||(1210545-1210732)
chr1 (451-638)||(8391570-8391759)
chr1 (451-677)||(22089894-22090120)
chr1 (451-675)||(43240639-43240863)
chr1 (451-638)||(30202425-30202612)
chr1 (451-638)||(9592534-9592721)
chr1 (451-638)||(51441060-51441247)
chr1 (451-638)||(8671720-8671907)
chr1 (451-638)||(49347688-49347875)
chr1 (451-638)||(51601858-51602045)
chr1 (513-638)||(34792644-34792768)
chr1 (451-635)||(19936322-19936506)
chr1 (466-638)||(37463166-37463334)
chr1 (529-638)||(32231249-32231358)
chr1 (451-638)||(9599689-9599876)
chr1 (538-638)||(4001750-4001848)
chr1 (451-604)||(39140314-39140466)
chr1 (531-634)||(18469379-18469482)
chr1 (451-612)||(34827423-34827584)
chr1 (529-618)||(26016315-26016404)
chr1 (451-554)||(41560236-41560339)
chr1 (510-612)||(46226603-46226705)
chr1 (562-638)||(9509229-9509305)
chr1 (497-638)||(38807970-38808106)
chr1 (529-611)||(52633494-52633575)
chr1 (516-578)||(3192071-3192133)
chr1 (516-578)||(3200889-3200951)
chr1 (516-578)||(3209726-3209788)
chr1 (501-638)||(4379855-4379992)
chr1 (568-637)||(22167643-22167712)
chr1 (510-611)||(40419498-40419599)
chr1 (545-609)||(10200486-10200550)
chr1 (451-491)||(27445698-27445738)
chr1 (594-638)||(52561906-52561950)
chr1 (557-624)||(52442813-52442880)
chr1 (510-612)||(7814323-7814425)
chr1 (567-609)||(12135646-12135688)
chr1 (547-589)||(38877677-38877719)
chr1 (537-589)||(11584012-11584064)
chr1 (547-611)||(16273142-16273205)
chr1 (576-632)||(18793289-18793345)
chr1 (451-491)||(21275701-21275741)
chr1 (582-622)||(27848115-27848155)
[»] chr7 (45 HSPs)
chr7 (451-638)||(38606805-38606992)
chr7 (451-638)||(43281476-43281663)
chr7 (451-624)||(32630395-32630568)
chr7 (451-638)||(34869220-34869407)
chr7 (451-638)||(31005023-31005210)
chr7 (451-638)||(33350101-33350288)
chr7 (451-638)||(35906496-35906683)
chr7 (451-638)||(36651794-36651981)
chr7 (451-638)||(11593760-11593947)
chr7 (451-638)||(39906665-39906857)
chr7 (451-638)||(12841570-12841757)
chr7 (451-638)||(33072754-33072941)
chr7 (451-635)||(7272839-7273023)
chr7 (451-638)||(36869584-36869771)
chr7 (451-637)||(46356152-46356333)
chr7 (472-638)||(49029097-49029263)
chr7 (451-638)||(23404218-23404405)
chr7 (463-638)||(13859303-13859476)
chr7 (518-638)||(37617811-37617931)
chr7 (542-638)||(45836775-45836871)
chr7 (472-617)||(25579387-25579532)
chr7 (562-638)||(44855467-44855543)
chr7 (524-622)||(47848547-47848645)
chr7 (451-525)||(37616716-37616790)
chr7 (484-586)||(15681190-15681292)
chr7 (560-638)||(43491217-43491295)
chr7 (497-638)||(7189529-7189669)
chr7 (540-624)||(36514514-36514598)
chr7 (541-638)||(27022001-27022098)
chr7 (559-638)||(35559289-35559368)
chr7 (573-638)||(24598441-24598506)
chr7 (545-618)||(42187365-42187438)
chr7 (562-614)||(5335833-5335885)
chr7 (586-638)||(8492528-8492580)
chr7 (562-610)||(28542206-28542254)
chr7 (559-610)||(1740705-1740756)
chr7 (506-577)||(28628286-28628357)
chr7 (567-638)||(39811873-39811944)
chr7 (560-638)||(36136673-36136751)
chr7 (567-612)||(14593677-14593722)
chr7 (567-612)||(16013200-16013245)
chr7 (557-638)||(30200254-30200335)
chr7 (591-635)||(25731651-25731695)
chr7 (540-624)||(38135525-38135609)
chr7 (565-613)||(40008737-40008785)
[»] chr3 (37 HSPs)
chr3 (451-638)||(5168628-5168815)
chr3 (451-638)||(25191179-25191366)
chr3 (451-638)||(53519386-53519573)
chr3 (451-638)||(51448004-51448191)
chr3 (451-638)||(52138600-52138787)
chr3 (451-638)||(28245237-28245424)
chr3 (451-613)||(47542032-47542193)
chr3 (451-633)||(38849894-38850076)
chr3 (502-638)||(33272323-33272459)
chr3 (481-638)||(54278850-54279007)
chr3 (472-613)||(43695085-43695226)
chr3 (474-624)||(26490139-26490290)
chr3 (451-638)||(27917372-27917559)
chr3 (451-638)||(3186569-3186756)
chr3 (529-638)||(45728023-45728133)
chr3 (509-635)||(48953694-48953819)
chr3 (570-638)||(21992-22060)
chr3 (560-638)||(47233891-47233969)
chr3 (514-638)||(49503849-49503978)
chr3 (546-638)||(45236751-45236843)
chr3 (545-638)||(54128272-54128365)
chr3 (510-634)||(30345386-30345506)
chr3 (451-554)||(40674492-40674595)
chr3 (501-624)||(43308416-43308539)
chr3 (529-624)||(345020-345115)
chr3 (529-624)||(2341023-2341118)
chr3 (511-624)||(46367692-46367807)
chr3 (572-620)||(46431984-46432032)
chr3 (573-624)||(19736918-19736969)
chr3 (576-638)||(19676385-19676447)
chr3 (574-624)||(38054646-38054696)
chr3 (562-612)||(46568027-46568077)
chr3 (548-622)||(50249278-50249352)
chr3 (527-612)||(29919180-29919265)
chr3 (527-612)||(29968333-29968418)
chr3 (585-638)||(48734428-48734481)
chr3 (568-620)||(42510324-42510376)
[»] chr2 (36 HSPs)
chr2 (451-638)||(11992401-11992588)
chr2 (451-638)||(41197523-41197710)
chr2 (451-638)||(41763336-41763523)
chr2 (451-638)||(45367919-45368106)
chr2 (467-638)||(38429700-38429871)
chr2 (451-638)||(2610328-2610515)
chr2 (454-638)||(23997420-23997604)
chr2 (451-638)||(8180580-8180767)
chr2 (451-638)||(3865872-3866059)
chr2 (464-634)||(36183264-36183434)
chr2 (451-624)||(451931-452104)
chr2 (451-623)||(30743423-30743595)
chr2 (451-638)||(3243946-3244133)
chr2 (451-638)||(4807392-4807579)
chr2 (453-638)||(12734508-12734688)
chr2 (453-635)||(24583904-24584086)
chr2 (460-636)||(6238051-6238227)
chr2 (451-635)||(16097288-16097476)
chr2 (565-638)||(38452984-38453057)
chr2 (547-634)||(7825254-7825341)
chr2 (537-624)||(19337157-19337245)
chr2 (451-492)||(38453061-38453102)
chr2 (510-638)||(13149172-13149300)
chr2 (530-638)||(17581348-17581455)
chr2 (472-564)||(32443436-32443527)
chr2 (557-611)||(9647927-9647981)
chr2 (529-586)||(28908489-28908546)
chr2 (540-632)||(23714559-23714651)
chr2 (540-632)||(24102231-24102323)
chr2 (568-612)||(45077665-45077709)
chr2 (511-609)||(1456095-1456191)
chr2 (564-638)||(9556663-9556737)
chr2 (592-638)||(18424670-18424716)
chr2 (566-612)||(38434866-38434912)
chr2 (567-632)||(4598865-4598930)
chr2 (533-602)||(13592627-13592695)
[»] chr8 (35 HSPs)
chr8 (451-637)||(42854300-42854486)
chr8 (452-638)||(15215566-15215752)
chr8 (451-638)||(36565536-36565723)
chr8 (451-638)||(39946657-39946844)
chr8 (462-638)||(18752168-18752344)
chr8 (451-638)||(36395245-36395435)
chr8 (451-638)||(12492137-12492324)
chr8 (451-638)||(18124976-18125162)
chr8 (451-638)||(37077565-37077752)
chr8 (451-638)||(36544952-36545134)
chr8 (451-638)||(25288702-25288889)
chr8 (451-638)||(25300037-25300224)
chr8 (451-638)||(2796355-2796544)
chr8 (451-634)||(8879739-8879916)
chr8 (552-677)||(40813223-40813348)
chr8 (452-638)||(29735610-29735793)
chr8 (451-521)||(4032907-4032976)
chr8 (510-632)||(9905187-9905309)
chr8 (501-638)||(30783335-30783471)
chr8 (569-638)||(45419157-45419226)
chr8 (510-633)||(13171949-13172072)
chr8 (540-638)||(13986383-13986481)
chr8 (451-508)||(25439336-25439393)
chr8 (512-621)||(39760736-39760845)
chr8 (501-565)||(17491994-17492058)
chr8 (574-638)||(29520583-29520647)
chr8 (510-633)||(2518691-2518814)
chr8 (564-607)||(30456537-30456580)
chr8 (545-624)||(36069537-36069616)
chr8 (529-624)||(36143247-36143342)
chr8 (525-624)||(38328116-38328215)
chr8 (540-611)||(45512818-45512889)
chr8 (560-638)||(6510721-6510798)
chr8 (559-624)||(13589347-13589412)
chr8 (578-611)||(25439394-25439427)
[»] chr6 (28 HSPs)
chr6 (451-638)||(9706576-9706763)
chr6 (454-677)||(5258406-5258629)
chr6 (461-638)||(607969-608146)
chr6 (451-638)||(5631618-5631805)
chr6 (451-638)||(14030606-14030794)
chr6 (451-638)||(10100152-10100339)
chr6 (451-638)||(20427931-20428118)
chr6 (472-638)||(28085197-28085363)
chr6 (451-637)||(2689456-2689642)
chr6 (476-638)||(30031081-30031243)
chr6 (517-638)||(35043736-35043857)
chr6 (451-638)||(2065051-2065238)
chr6 (451-638)||(6056065-6056252)
chr6 (496-638)||(33496029-33496171)
chr6 (567-638)||(9594007-9594078)
chr6 (510-632)||(28027126-28027248)
chr6 (451-571)||(30679274-30679394)
chr6 (565-677)||(32755833-32755945)
chr6 (562-638)||(5080766-5080842)
chr6 (529-613)||(4948627-4948711)
chr6 (529-613)||(4955598-4955682)
chr6 (460-555)||(24631132-24631227)
chr6 (508-631)||(26291636-26291758)
chr6 (579-638)||(9568588-9568647)
chr6 (557-624)||(33083964-33084031)
chr6 (557-624)||(33998313-33998380)
chr6 (510-604)||(2079192-2079286)
chr6 (536-602)||(25494181-25494246)
[»] chr4 (57 HSPs)
chr4 (451-638)||(31960109-31960296)
chr4 (451-619)||(27450487-27450655)
chr4 (451-638)||(33227009-33227196)
chr4 (451-638)||(436029-436216)
chr4 (451-638)||(23906596-23906783)
chr4 (451-638)||(43433718-43433905)
chr4 (451-638)||(1211685-1211872)
chr4 (451-638)||(48174388-48174575)
chr4 (451-638)||(50286771-50286958)
chr4 (451-638)||(56375090-56375277)
chr4 (451-638)||(1777310-1777497)
chr4 (451-638)||(46583119-46583306)
chr4 (451-638)||(53707594-53707781)
chr4 (456-638)||(52569810-52569992)
chr4 (458-638)||(47265497-47265677)
chr4 (501-638)||(45205143-45205280)
chr4 (451-607)||(39708258-39708414)
chr4 (498-638)||(31458875-31459015)
chr4 (519-638)||(12494618-12494737)
chr4 (451-638)||(48622836-48623009)
chr4 (451-638)||(41009645-41009832)
chr4 (520-638)||(33191143-33191261)
chr4 (479-638)||(4440684-4440842)
chr4 (451-638)||(16002728-16002914)
chr4 (529-638)||(27983078-27983187)
chr4 (517-638)||(39100828-39100949)
chr4 (451-635)||(35690104-35690288)
chr4 (472-633)||(7092520-7092680)
chr4 (508-638)||(1793317-1793447)
chr4 (465-606)||(55578845-55578986)
chr4 (476-618)||(11389545-11389687)
chr4 (560-638)||(37773745-37773823)
chr4 (511-580)||(26037835-26037904)
chr4 (530-624)||(40933205-40933299)
chr4 (560-636)||(20601943-20602019)
chr4 (501-610)||(934758-934867)
chr4 (501-624)||(34233342-34233465)
chr4 (524-613)||(49739114-49739203)
chr4 (566-638)||(20105766-20105838)
chr4 (546-638)||(28236080-28236172)
chr4 (562-638)||(43070059-43070135)
chr4 (575-638)||(2588905-2588968)
chr4 (557-611)||(17900386-17900440)
chr4 (562-624)||(25967576-25967638)
chr4 (545-619)||(30853310-30853384)
chr4 (568-622)||(33709836-33709890)
chr4 (505-611)||(44860708-44860814)
chr4 (585-638)||(51421666-51421719)
chr4 (529-638)||(21106860-21106971)
chr4 (540-588)||(29398708-29398756)
chr4 (582-638)||(37797783-37797839)
chr4 (563-638)||(20591595-20591670)
chr4 (451-504)||(54914618-54914671)
chr4 (531-583)||(28351550-28351602)
chr4 (507-587)||(38904065-38904145)
chr4 (547-611)||(45185339-45185403)
chr4 (574-638)||(45423542-45423606)
[»] chr5 (33 HSPs)
chr5 (451-638)||(12492682-12492869)
chr5 (451-638)||(2075769-2075956)
chr5 (451-638)||(1275065-1275252)
chr5 (451-638)||(10639097-10639284)
chr5 (451-638)||(16347673-16347860)
chr5 (451-638)||(1287884-1288071)
chr5 (451-638)||(3301649-3301831)
chr5 (457-638)||(20318793-20318969)
chr5 (451-638)||(28977152-28977339)
chr5 (451-617)||(34272822-34272988)
chr5 (451-638)||(24178324-24178497)
chr5 (451-638)||(27694-27880)
chr5 (466-633)||(36200597-36200764)
chr5 (451-527)||(3394510-3394589)
chr5 (501-638)||(7678331-7678467)
chr5 (540-619)||(16454600-16454679)
chr5 (577-635)||(4496308-4496368)
chr5 (538-611)||(21093663-21093736)
chr5 (547-608)||(5848401-5848462)
chr5 (529-638)||(21952229-21952338)
chr5 (510-619)||(32516417-32516526)
chr5 (582-638)||(26884984-26885040)
chr5 (478-586)||(32516165-32516273)
chr5 (529-624)||(5305494-5305589)
chr5 (502-633)||(41110041-41110172)
chr5 (568-638)||(11002716-11002786)
chr5 (573-613)||(27998345-27998385)
chr5 (532-612)||(43558135-43558215)
chr5 (573-638)||(28186963-28187028)
chr5 (579-624)||(34194805-34194850)
chr5 (582-638)||(9235000-9235056)
chr5 (563-611)||(27553752-27553800)
chr5 (574-638)||(34039960-34040024)
[»] scaffold0024 (1 HSPs)
scaffold0024 (451-638)||(82521-82708)
[»] scaffold0018 (2 HSPs)
scaffold0018 (451-638)||(31268-31455)
scaffold0018 (530-633)||(44171-44274)
[»] scaffold0570 (1 HSPs)
scaffold0570 (451-614)||(2589-2752)
[»] scaffold0113 (1 HSPs)
scaffold0113 (451-637)||(11894-12080)
[»] scaffold0157 (1 HSPs)
scaffold0157 (519-638)||(25740-25859)
[»] scaffold0045 (1 HSPs)
scaffold0045 (451-638)||(86902-87091)
[»] scaffold0036 (1 HSPs)
scaffold0036 (519-638)||(4567-4686)
[»] scaffold1493 (1 HSPs)
scaffold1493 (451-489)||(29-67)


Alignment Details
Target: chr1 (Bit Score: 566; Significance: 0; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 1 - 638
Target Start/End: Original strand, 695618 - 696256
Alignment:
Q  1 tactgaaataaaataaaa-aatgacgtgtttagtttgtttaattttgtactgtatagtgaaggtaatgacatttgaacttaggacctcatcattagacca 99  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  695618 tactgaaataaaaaaaaaaaatgacgtgtttagtttgtttaattttgtactgtatagtgaaggtaatgacatttgaacttaggacctcatcattagacca 695717  T
Q  100 atcttagtgtcttaaatgatgttttttgtggttggtgtttgttatttcacagataatgttaatgtcaacaccaaagaggaagtgattacaaaaattaaaa 199  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  695718 atcttagtgtcttaaatgacgttttttgtgattggtgtttgttatttcacagataatgttaatgtcaacaccaaagaggaagtgattacaaaaattaaaa 695817  T
Q  200 gcatggaaaactcagcaacttctgtcctatgtagtctgtctgcacacgaaaagcaacagaatcacttcttggaagatataattggggtcgttgccctcct 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  695818 gcatggaaaactcagcaacttctgtcctatgtagtctgtctgcacacgaaaagcaacagaatcatttcttggaagatataattggggtcgttgccctcct 695917  T
Q  300 tggttctgttaagagtcctgagcttagcaggtttgtcaagtgtttcatctttcccatcccagccgaccatnnnnnnncaaatactataaacaatcttgca 399  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||| ||||||||||||||    
T  695918 tggttctgttaagagtcctaagcttagcaggtttgtcaagtgtttcacctttcccatcccagccgaccataaaaaaacaaatactctaaacaatcttgca 696017  T
Q  400 tttcattatcattggtaaaggataaaattcttggttcaaaagtgtgattgtataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagt 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  696018 tttcattatcattggtaaaggataaaattcttggttcaaaagtgtgattgtataagaaagtaccacttaagctgaaaggaaagttctatcggacagcagt 696117  T
Q  500 cagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagt 599  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  696118 cagaccggcaatgttgtatggtacggagtgttgggtggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagt 696217  T
Q  600 ggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  696218 ggtaagactagacaggataggattaggaatgacaccatt 696256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 15085734 - 15085921
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15085734 ataagaaagcaccacttaagctgaaaggaaagttctatcagacagcagtcaaaccggcaatgttgtatggtacggagtgttgggcggttaagagccaaca 15085833  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  15085834 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggacgagtggtaagactagataggataggattaggaatgacaccatt 15085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 168 - 451
Target Start/End: Original strand, 663564 - 663856
Alignment:
Q  168 caccaaagaggaagtgattacaaaaattaaaagcatggaaaactcagcaacttctgtcctatgtagtctgtctgcacacgaaaagcaacagaatcacttc 267  Q
    ||||||||| ||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  663564 caccaaagaagaaatgactacaaaaattaaaaacatggaaaactcagcagcttctgtcctatgtagtctctctgcacgtgaaaagcaacagaatcacttc 663663  T
Q  268 ttggaagatataattggggtcgttgccctccttggttctgttaagagtcctgagcttagcaggtttgtcaagtgtttcatctttcccatcccagccgacc 367  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||| ||||||| ||| |||    
T  663664 ttggaagatataattggggtcgttgccctccttggttctgttcagagtcctgagcttagcaggtttgtcaagtttatcaccttttccatccctgccaacc 663763  T
Q  368 a--tnnnnnnncaaatactataaa-------caatcttgcatttcattatcattggtaaaggataaaattcttggttcaaaagtgtgattgta 451  Q
    |          |||||||| ||||       |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||    
T  663764 aagaaagaaaacaaatactctaaacaatcttcaatcttgcatttcattatcattggtaaaggataaaatgcttggttctatagtgtgattgta 663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 32083227 - 32083040
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||    
T  32083227 ataagaaagtaccacttaagctgaaaggaaagttctatcagacaacagtcagaccgacaatgttgtatggtacagagtgttgggcggttaagagtcaaca 32083128  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  32083127 cgagagtaaagtatgtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacagggtaggattaggaatgacaccatt 32083040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 1210545 - 1210732
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  1210545 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagttcgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 1210644  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  1210645 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 1210732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 8391570 - 8391759
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtat--ggtacggagagttgggcggttaagagccaa 548  Q
    |||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||| ||||  ||||| ||| |||||||||||||||| |||    
T  8391570 ataagaaagtaccacttaagcttaaaggaatgttttatcggacagcagtcagaccggcaatgtcgtatatggtacagagtgttgggcggttaagagtcaa 8391669  T
Q  549 cacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  8391670 cacgagagtaaagtaagtgtagcggagatgaagatgttgtgttggatgagtggtaagactacacaagataggattaggaatgacaccatt 8391759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 451 - 677
Target Start/End: Original strand, 22089894 - 22090120
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||  |||||| |||||||||| |||||||||||||||| |||||    
T  22089894 ataagaaaataccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtgtggtacggagtgttgggcggttaagagtcaaca 22089993  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccattnnnnnnnnnnnn 650  Q
     |||| | ||||||||||||| |||||||||||| || | |||||||||||||||||||||||||||||||||| |||||||||||||                
T  22089994 tgagaatcaagtaagtgtagcagagatgaggatgctgtgttggatgagtggtaagactagacaggataggattatgaatgacaccattagagagagagag 22090093  T
Q  651 tgggggtagcacctatagtagaaaagt 677  Q
    |||||||||||||||||||||||||||    
T  22090094 tgggggtagcacctatagtagaaaagt 22090120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 451 - 675
Target Start/End: Complemental strand, 43240863 - 43240639
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||| ||||||| |||||| ||||||||| |||||    
T  43240863 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatgatacggagtgttgggaggttaagagtcaaca 43240764  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccattnnnnnnnnnnnn 650  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||                
T  43240763 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacgccattagagagagagag 43240664  T
Q  651 tgggggtagcacctatagtagaaaa 675  Q
    |||||||||||||||||||||||||    
T  43240663 tgggggtagcacctatagtagaaaa 43240639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 30202612 - 30202425
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||  |||||| |||||| ||| |||||||||||||||| |||||    
T  30202612 ataagaaagtaccacttaagttgaaaggaaagttctatcggacaacagtccgaccggcgttgttgtgtggtacagagtgttgggcggttaagagtcaaca 30202513  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  30202512 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 30202425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 9592534 - 9592721
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  |||||||| | |  ||||||||||||||||| |||||||||||||||  |||||    
T  9592534 ataagaaagtaccacttaagttgaaaggaaagttctatcggacaatagtcagactgacgttgttgtatggtacggagtgttgggcggttaagaatcaaca 9592633  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  9592634 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 9592721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 51441247 - 51441060
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |  ||||||||||||||||| |||||||||||||||| |||||    
T  51441247 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccgacgttgttgtatggtacggagtgttgggcggttaagagtcaaca 51441148  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||| |||||||| ||||||||||||||||  |||| |||||||||||||||||| |||||||||| |||||||||||||    
T  51441147 tgagaatcaagtgagtgtagcagagatgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgacaccatt 51441060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 8671720 - 8671907
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| |||||||||||||||||| || | |||||||||||||  |||||||||||||| |  ||||| |||||||||| |||||    
T  8671720 ataagaaagtaccacttaagttgaaaggaaagttctatcagacaacagtcagaccggcgttgttgtatggtacgaaatgttggacggttaagagtcaaca 8671819  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  8671820 tgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 8671907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 49347875 - 49347688
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||  ||||||||| ||||||| ||||  |  |||||||||||||| || |||||||||||||||| |||||    
T  49347875 ataagaaagtaccacttaagttgaaaggaaaaatctatcggacagcagtccgaccaaccttgttgtatggtacgaagtgttgggcggttaagagtcaaca 49347776  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  49347775 tgagaatcaagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 49347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 51601858 - 51602045
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||| |||||| ||||| ||||||||||||||| || |||| |||||||  ||||||||||||||||| |||||| ||||||||| |||||    
T  51601858 ataagaaagtaccccttaagttgaaatgaaagttctatcggacagtagtccgaccggcgttgttgtatggtacggagtgttgggtggttaagagtcaaca 51601957  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||  || |||||||||||||| | ||||||||||||||||||||| |||| ||||| |||||||||||||    
T  51601958 tgagaatcaagtaagtgtagtagatatgaggatgttgcgttagatgagtggtaagactagacatgatatgattaggaatgacaccatt 51602045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 513 - 638
Target Start/End: Complemental strand, 34792768 - 34792644
Alignment:
Q  513 ttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    ||||||||||||||| |||||||||||||||| |||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34792768 ttgtatggtacggagtgttgggcggttaagagtcaacacgagaatcaag-aagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagac 34792670  T
Q  613 aggataggattaagaatgacaccatt 638  Q
    | |||||||||| |||||| ||||||    
T  34792669 atgataggattaggaatgaaaccatt 34792644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 451 - 635
Target Start/End: Original strand, 19936322 - 19936506
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||| |||||  |||||||||| || ||||||| |||||| ||||| |||||||| || ||||  ||| ||||||||||||||| ||||||    
T  19936322 ataagaaagtaccgcttaaaatgaaaggaaaattatatcggacagcagttagaccagcaatgttatagggtatagagtgttgggcggttaagaaccaaca 19936421  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacc 635  Q
     |||| | || ||||  ||||||||||||| |||||| | |||||||||||||||||||||  |||||||| || ||||||||||    
T  19936422 tgagaatcaaataagcatagcggagatgagaatgttgtgttggatgagtggtaagactagatgggataggaataggaatgacacc 19936506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 466 - 638
Target Start/End: Complemental strand, 37463334 - 37463166
Alignment:
Q  466 ttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaag 565  Q
    ||||| |||||||||| ||||||| || | |||||||||  ||||||||||||||||| ||| |||||| |||||||| ||||||| ||    ||  |||    
T  37463334 ttaagttgaaaggaaaattctatcagacaacagtcagactagcaatgttgtatggtacagagtgttgggtggttaagaaccaacacaag----aatcaag 37463239  T
Q  566 tgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  37463238 tgtagaggagatgaggatgtttcattggatgagtggtaagactagacaggttaggattaggaatgacaccatt 37463166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 529 - 638
Target Start/End: Complemental strand, 32231358 - 32231249
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaa 628  Q
    |||||||||||||| | |||||||||| | ||||||||||||  ||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||    
T  32231358 gttgggcggttaagggtcaacacgagaatcaagtaagtgtagtagagatgaggatgttgcgctagatgagtggtaagattagacatgataggattaggaa 32231259  T
Q  629 tgacaccatt 638  Q
    ||||||||||    
T  32231258 tgacaccatt 32231249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 9599876 - 9599689
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||| ||| || ||||| |||| ||||||| ||  ||||||||||| || |||| ||||| |||  || |||| |||||| ||| ||||||    
T  9599876 ataagaaagtaccgcttcagttgaaatgaaaattctatcagaccgcagtcagaccagcgatgtggtatgatacaaagtgttgtgcggttgagaaccaaca 9599777  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    | | | | ||||||| ||||| ||||||||||||||| | |||||||||||||||||||||| ||||| ||||| |||||||| ||||    
T  9599776 caataatcaagtaagcgtagcagagatgaggatgttgtgttggatgagtggtaagactagacgggatatgattaggaatgacatcatt 9599689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 538 - 638
Target Start/End: Complemental strand, 4001848 - 4001750
Alignment:
Q  538 ttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccat 637  Q
    ||||||| |||||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||    
T  4001848 ttaagagtcaacacgagagtaaagtaagt--agcgaagatgaggatgttgcgctagatgagtggtaagactagacaaaataggattaggaatgacaccat 4001751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 451 - 604
Target Start/End: Original strand, 39140314 - 39140466
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||| |||||  ||||||| || |||||||||| ||||||||||||||  |||||||||||||| ||| ||||||| ||||||| ||| ||    
T  39140314 ataagaaagtaccgcttaaattgaaaggcaaattctatcggacagcagtcagaccggtgatgttgtatggtac-gagtgttgggcagttaagaaccatca 39140412  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaa 604  Q
     || | | ||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  39140413 tgaaaatcaagtaagcgtagtagagatgaggatgttgcgttggatgagtggtaa 39140466  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 531 - 634
Target Start/End: Complemental strand, 18469482 - 18469379
Alignment:
Q  531 tgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatg 630  Q
    ||||||||||||| ||||||||||| | ||||||  ||||||||||||| |||| |||| || |||||||||||||||||||| |||| ||||| |||||    
T  18469482 tgggcggttaagaaccaacacgagaatcaagtaaacgtagcggagatgacgatgctgcgttgtatgagtggtaagactagacatgatatgattaggaatg 18469383  T
Q  631 acac 634  Q
    ||||    
T  18469382 acac 18469379  T

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Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 612
Target Start/End: Complemental strand, 34827584 - 34827423
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||  |||||  |||||||||| || ||| ||| | |||||||| |  | |||||||||||||| ||| ||||  ||||||||| ||||||    
T  34827584 ataagaaagtactgcttaaattgaaaggaaaattatattggacaacagtcagatcaacgatgttgtatggtacagagtgttgttcggttaagaaccaaca 34827485  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    ||| |   || |||||||| | ||||||||||||||| | ||||||||||||||||||||||    
T  34827484 cgaaaaacaaataagtgtaactgagatgaggatgttgtgttggatgagtggtaagactagac 34827423  T

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Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 618
Target Start/End: Original strand, 26016315 - 26016404
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggata 618  Q
    |||||||||| |||| |||||| ||   ||||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  26016315 gttgggcggtaaagaaccaacaagaacataaagtaagcgtagcagagatgaggatgttgcgttggatgtgtggtaagactagacaggata 26016404  T

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Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 451 - 554
Target Start/End: Original strand, 41560236 - 41560339
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||| |||||| |||||||||| ||||||| ||  || |||||||| || |||||||||| |||||||  ||||||||||||||  |||||    
T  41560236 ataagaaagtaccgcttaagttgaaaggaaaattctatccgaacgctgtcagaccagcgatgttgtatgatacggagtattgggcggttaagaatcaaca 41560335  T
Q  551 cgag 554  Q
    ||||    
T  41560336 cgag 41560339  T

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Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 612
Target Start/End: Complemental strand, 46226705 - 46226603
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    ||||||||||||||| |  |||| ||  |||| | ||||||||||| | |||||||| |||||||||||| ||||||||| |||||||||||| ||||||    
T  46226705 atgttgtatggtacgaaatgttgagcaattaacaaccaacacgagaatcaagtaagtttagcggagatgatgatgttgcgttggatgagtggtgagacta 46226606  T
Q  610 gac 612  Q
    |||    
T  46226605 gac 46226603  T

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Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 9509229 - 9509305
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| ||||| ||||||||||||||| | |||||||||| ||||||||||||||||| |||||  ||||||||||||    
T  9509229 taagcgtagcagagatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaatgacaccatt 9509305  T

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Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 497 - 638
Target Start/End: Complemental strand, 38808106 - 38807970
Alignment:
Q  497 agtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatg 596  Q
    |||| ||||||| |||||||| ||||| ||| |||||| ||||||||||    |||||| | ||||||| || ||||| |||||||||||| | |||||     
T  38808106 agtccgaccggcgatgttgtacggtacagagtgttgggaggttaagagc----acgagaattaagtaagcgtggcggatatgaggatgttgtgttggat- 38808012  T
Q  597 agtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||| |||| |||||| ||||  ||||||||||||    
T  38808011 agtggtaagaccagacgggatagaattagaaatgacaccatt 38807970  T

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Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 52633575 - 52633494
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    ||||||| ||||||| || |||||||| |||||||||||| | |||||||||||||||||| || ||| | ||||||||||||    
T  52633575 gttgggcagttaagaaccgacacgagaataaagtaagtgt-gtggagatgaggatgttgcgttgaatgtgcggtaagactaga 52633494  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 578
Target Start/End: Original strand, 3192071 - 3192133
Alignment:
Q  516 tatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatg 578  Q
    |||||||| ||| |||||||||||||||| ||||| |||| | ||||||||||||| ||||||    
T  3192071 tatggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatg 3192133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 578
Target Start/End: Original strand, 3200889 - 3200951
Alignment:
Q  516 tatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatg 578  Q
    |||||||| ||| |||||||||||||||| ||||| |||| | ||||||||||||| ||||||    
T  3200889 tatggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatg 3200951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 578
Target Start/End: Original strand, 3209726 - 3209788
Alignment:
Q  516 tatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatg 578  Q
    |||||||| ||| |||||||||||||||| ||||| |||| | ||||||||||||| ||||||    
T  3209726 tatggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatg 3209788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 638
Target Start/End: Original strand, 4379855 - 4379992
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    |||| ||| |||||||| || || ||| ||| ||| || |||| ||||||||| | ||||  |||  |||| ||||||||||||||| | |||||| |||    
T  4379855 agactggcgatgttgtacgggacagagtgttaggcagtaaagaaccaacacgaaaataaataaagcttagctgagatgaggatgttgtgttggatgtgtg 4379954  T
Q  601 gtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||| | |||| |||||  ||||||| ||||    
T  4379955 gtaagactagaaaagatatgattagaaatgacaacatt 4379992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 637
Target Start/End: Complemental strand, 22167712 - 22167643
Alignment:
Q  568 tagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccat 637  Q
    |||||||||| ||||||||||| |||||||| | ||| || ||||  |||| ||||||||||||||||||    
T  22167712 tagcggagataaggatgttgcgttggatgagggttaaaacaagacgagatatgattaagaatgacaccat 22167643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 611
Target Start/End: Original strand, 40419498 - 40419599
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    |||||||| || || ||| |||||| ||| |||| |||||||||   ||||||||||||||| |||||||||||| |||| || |||  |||||| ||||    
T  40419498 atgttgtacggaacagagtgttgggtggtaaagaaccaacacgaacataaagtaagtgtagcagagatgaggatggtgcgttgaatgtatggtaaaacta 40419597  T
Q  610 ga 611  Q
    ||    
T  40419598 ga 40419599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 609
Target Start/End: Complemental strand, 10200550 - 10200486
Alignment:
Q  545 ccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    |||||| |||| | ||||||| ||||||||||||||||| ||||| | ||||||| |||||||||    
T  10200550 ccaacatgagaatgaagtaagcgtagcggagatgaggatattgcgttagatgagttgtaagacta 10200486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 491
Target Start/End: Original strand, 27445698 - 27445738
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcgg 491  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  27445698 ataagaaagtaccacttaaattgaaaggaaagttctatcgg 27445738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 638
Target Start/End: Complemental strand, 52561950 - 52561906
Alignment:
Q  594 atgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||    
T  52561950 atgagtggtaagactagacgggatatgattaggaatgacaccatt 52561906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 624
Target Start/End: Complemental strand, 52442880 - 52442813
Alignment:
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||| |||| ||||| || |||||||||||| | |||||| |||||||||||||||| |||| |||||    
T  52442880 taaattaagcgtagcagacatgaggatgttgtgttggatgtgtggtaagactagacaagataagatta 52442813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 612
Target Start/End: Original strand, 7814323 - 7814425
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    ||||||||||| || ||  |||||  |||||||| ||||||||||| |||||||| ||| |   ||||||||||||| || || ||| ||| ||||||||    
T  7814323 atgttgtatggaacagaatgttggatggttaagaaccaacacgagaataaagtaattgttgtatagatgaggatgttacgttgaatgtgtgataagacta 7814422  T
Q  610 gac 612  Q
    |||    
T  7814423 gac 7814425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 609
Target Start/End: Original strand, 12135646 - 12135688
Alignment:
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  12135646 gtaggggagatgaggatgttgcgctggatatgtggtaagacta 12135688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 589
Target Start/End: Complemental strand, 38877719 - 38877677
Alignment:
Q  547 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcg 589  Q
    ||||||||| |||| |||||||||| |||||||||||||||||    
T  38877719 aacacgagaataaaataagtgtagcagagatgaggatgttgcg 38877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 537 - 589
Target Start/End: Original strand, 11584012 - 11584064
Alignment:
Q  537 gttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcg 589  Q
    ||||||| ||||||||||| |||| |||  ||||| |||||||||||||||||    
T  11584012 gttaagaaccaacacgagaataaaataatcgtagcagagatgaggatgttgcg 11584064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 16273205 - 16273142
Alignment:
Q  547 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    ||||||||| || ||||||||| |||||||||   |||||||| |||||| ||||||||||||||    
T  16273205 aacacgagaatatagtaagtgt-gcggagatggcaatgttgcgttggatgtgtggtaagactaga 16273142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 576 - 632
Target Start/End: Complemental strand, 18793345 - 18793289
Alignment:
Q  576 atgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgac 632  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||| | ||| ||||||    
T  18793345 atgatgatgttgcgttggatgtgtggaaagactagacaggatagaactaaaaatgac 18793289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 451 - 491
Target Start/End: Original strand, 21275701 - 21275741
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcgg 491  Q
    ||||||||||||||||||||||||| ||||| || ||||||    
T  21275701 ataagaaagtaccacttaagctgaagggaaaattttatcgg 21275741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 582 - 622
Target Start/End: Complemental strand, 27848155 - 27848115
Alignment:
Q  582 atgttgcgctggatgagtggtaagactagacaggataggat 622  Q
    |||||| | |||||||||||||||||||||| |||||||||    
T  27848155 atgttgtgttggatgagtggtaagactagacgggataggat 27848115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 2e-82; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 38606805 - 38606992
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38606805 ataagaaagtaccacttaagctgaaaggaaagttctatcggacaacagtcagaccggcaatgttgtatggtacggagtgttgggcggttaagagccaaca 38606904  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  38606905 cgagagtaaagtaagtgtagcggagatgataatgttgcgctggatgagtggtaagactagacatgataggattaggaatgacaacatt 38606992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 43281476 - 43281663
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||     
T  43281476 ataagaaagtaccacttaagctgaaaggaaagttctatcggacagcagtcaaaccggcaatgttgtatggtacagagtgttgggcggttaagagccaacg 43281575  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  43281576 caagagtaaagtaagtgtagcggggatgaggatgttgcgctggatgagtggtaagactagacaatataggattaggaatgacaccatt 43281663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 451 - 624
Target Start/End: Original strand, 32630395 - 32630568
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||| |||||||||||||||||||||||||||||| | || |||||||| |||||||||||||||||||| | ||||||||||||| ||||||    
T  32630395 ataagaaagtatcacttaagctgaaaggaaagttctatcggacatcaatcagaccgacaatgttgtatggtacggagtgctgggcggttaagaaccaaca 32630494  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  32630495 cgagagtaaagtaagtgtagcggagatgaggatgttgagctggatgagtggtaagactagacatgataggatta 32630568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 34869220 - 34869407
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  34869220 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 34869319  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  34869320 tgagaatcaagtaagtgtagtagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 34869407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 31005023 - 31005210
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| ||| |||||||||||| |||||    
T  31005023 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttaggcggttaagagtcaaca 31005122  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  31005123 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataacaccatt 31005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 33350288 - 33350101
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  33350288 ataagaaagtaccacttaagttgacaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 33350189  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33350188 tgagaatcaagtaagtgtagcagagatgaggatgttgccttggatgagtggtaagactagacatgataggattaagaatgacaccatt 33350101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 35906683 - 35906496
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||| ||||||| |||||| ||||||||| |||||    
T  35906683 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatgatacggagtgttgggtggttaagagtcaaca 35906584  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35906583 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 35906496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 36651794 - 36651981
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| || |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  36651794 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcaatccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 36651893  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36651894 tgagaatcaagtaagtgtaacagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36651981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 11593760 - 11593947
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||| ||||||||||||||| ||||||||||||||||||||| | ||||  |||||||  ||||||||||||||||| ||||| |||||||||| |||||    
T  11593760 ataaaaaagtaccacttaagttgaaaggaaagttctatcggacaacagttcgaccggcgttgttgtatggtacggagtgttggacggttaagagtcaaca 11593859  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  11593860 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 11593947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 39906857 - 39906665
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||| |||| ||||||| |||||    
T  39906857 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttaggcgattaagagtcaaca 39906758  T
Q  551 cgagagtaaagtaagtgtagc-----ggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||||||||      |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  39906757 tgagaatcaagtaagtgtagcagagatgagatgaggatgctgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 39906665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 12841757 - 12841570
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||||  ||||||||||||||||| |||||| ||||||||| |||||    
T  12841757 ataagaaagtaccacttaagttgaaaggaaagttctatcgtacagcagtctgaccggcgttgttgtatggtacggagtgttgggtggttaagagtcaaca 12841658  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||| | |||||||||||||| |||||||| |||||||||| ||||||| |||||    
T  12841657 tgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaaaactagacatgataggattaggaatgaccccatt 12841570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 33072754 - 33072941
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||  ||||||||||||| ||| |||||||||||||||| |||||    
T  33072754 ataagaaagtaccacttaagttaaaaggaaagttctatcggacaacagttagaccggcgttgttgtatggtacagagtgttgggcggttaagagtcaaca 33072853  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | || |||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  33072854 tgagaatcaaataagtgtagcagagatgatgatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccatt 33072941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 451 - 635
Target Start/End: Original strand, 7272839 - 7273023
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||| ||||||||| ||||||  |||||||| |||| |||||||||||| ||| ||| ||||||||||| ||||||||||    
T  7272839 ataagaaagtaccacttaagttgagaggaaagttgtatcggtcagcagtcaaaccgacaatgttgtatgatacagagtgttgggcggttgagagccaaca 7272938  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacc 635  Q
    ||||| | ||||||||||| ||||||||||||||||| |||||||||| |||||||||| || ||||||||||| ||||||||||    
T  7272939 cgagaatcaagtaagtgtaccggagatgaggatgttgtgctggatgagcggtaagactacacgggataggattaggaatgacacc 7273023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 36869771 - 36869584
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||| |||||||||||||||||  |||| |||  |||||| |||||    
T  36869771 ataagaaagtaccacttaagttgaaaggaaagttctatcggacaacagtcaggccggcgatgttgtatggtacggaatgttgagcgactaagagtcaaca 36869672  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    || || | ||||||||||||| ||||||||||||||| | |||||||||||||||||| |||| |||||||||| |||||||||||||    
T  36869671 cgtgaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactggacatgataggattaggaatgacaccatt 36869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 451 - 637
Target Start/End: Complemental strand, 46356333 - 46356152
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  46356333 ataagaaagtactacttaagttgaaaggaaagttctatcggacagtagtcagaccggcattgttgtatggtacggagtgttgggcggttaagagtcaaca 46356234  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccat 637  Q
     |||    ||  ||||||||| |||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  46356233 tgag----aatcaagtgtagcagagatg-ggatgttgcgttgaatgagtggtaagactagacaggataggattaggaatgacaccat 46356152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 472 - 638
Target Start/End: Original strand, 49029097 - 49029263
Alignment:
Q  472 tgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagc 571  Q
    ||||||||||||||||||||| |||||||  |||||   ||||||||||||||||| |||||||||||||||| ||||| |||| | |||||||||||||    
T  49029097 tgaaaggaaagttctatcggacagcagtccaaccggtgttgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagc 49029196  T
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  49029197 agagatgaggatgttacgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 49029263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 23404218 - 23404405
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||| |||||||||| |||||||||| |||||||||| | ||||||||||| | || |||||||||||| ||  |||||||||||| ||||| ||    
T  23404218 ataagaaaggaccacttaagttgaaaggaaaattctatcggacaacagtcagaccgacgatattgtatggtacgaagttttgggcggttaaaagccagca 23404317  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | |||||||||||  ||| ||||||||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||    
T  23404318 cgagaatcaagtaagtgtattggaaatgaggatgttgcgctggatgagcggtaagactatacatgataggattaggaatgacaccatt 23404405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 463 - 638
Target Start/End: Complemental strand, 13859476 - 13859303
Alignment:
Q  463 cacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagt 562  Q
    |||||||| ||||||||||||||||| | | |||||| ||||||||| |||||| |||||||||  ||||||||||||||||  ||||||||| | ||||    
T  13859476 cacttaagttgaaaggaaagttctattgaacagcagttagaccggcagtgttgtttggtacggaatgttgggcggttaagagttaacacgagaatcaagt 13859377  T
Q  563 aagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||  ||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||||||||    
T  13859376 aagt--agcagagatgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccatt 13859303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 518 - 638
Target Start/End: Original strand, 37617811 - 37617931
Alignment:
Q  518 tggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggat 617  Q
    ||||||||||  ||||||||||||||| ||||| |||| | ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||    
T  37617811 tggtacggagtcttgggcggttaagagtcaacatgagaatcaagcaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaagat 37617910  T
Q  618 aggattaagaatgacaccatt 638  Q
    ||||||| |||||||||||||    
T  37617911 aggattaggaatgacaccatt 37617931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 45836871 - 45836775
Alignment:
Q  542 gagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  45836871 gagccaacacgagagtcaagtaagtgcagcggagatgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccatt 45836775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 472 - 617
Target Start/End: Complemental strand, 25579532 - 25579387
Alignment:
Q  472 tgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagc 571  Q
    |||| ||||| |||||||||| ||| || |||||||| ||||||||||| |||||  ||||||||||||||| ||||||||||| |||| |||| ||||     
T  25579532 tgaagggaaaattctatcggacagctgtaagaccggcgatgttgtatggaacggaatgttgggcggttaagaaccaacacgagaataaaataagcgtaga 25579433  T
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagacaggat 617  Q
    |||||||||||||||||| |||||| ||||||| |||||| |||||    
T  25579432 ggagatgaggatgttgcgttggatgtgtggtaatactagataggat 25579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 44855543 - 44855467
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  44855543 taagtgtagcagagatcaggatgttgtgctggatgagtggtaagactagacatgataggattaggaatgacaccatt 44855467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 622
Target Start/End: Original strand, 47848547 - 47848645
Alignment:
Q  524 ggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggat 622  Q
    |||| |||||| |||||||| ||||||||||| |||| ||||| ||| |||||||||||||||| | |||||| ||||||||||||||| |||||||||    
T  47848547 ggagtgttgggtggttaagaaccaacacgagaataaaataagtctaggggagatgaggatgttgtgttggatgtgtggtaagactagacgggataggat 47848645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 451 - 525
Target Start/End: Original strand, 37616716 - 37616790
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacgg 525  Q
    |||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||| || |||||||||||||||    
T  37616716 ataagaaagtaccacttaagttgaaaggaaagttatatcggccagcagtcagaccgacattgttgtatggtacgg 37616790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 586
Target Start/End: Original strand, 15681190 - 15681292
Alignment:
Q  484 tctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggat 583  Q
    ||||||||| |||| |||||| |   |||||||||||||  ||| ||||||||||||||||||||||||||| | |||||||||||| |||||| || ||    
T  15681190 tctatcggaaagcaatcagactgttgatgttgtatggtatagagtgttgggcggttaagagccaacacgagactcaagtaagtgtagtggagattagaat 15681289  T
Q  584 gtt 586  Q
    |||    
T  15681290 gtt 15681292  T

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Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 638
Target Start/End: Original strand, 43491217 - 43491295
Alignment:
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||| ||||  ||||| ||||| |||||||||||||    
T  43491217 agtaagtgtagccgagatgaggatgttgtgctggatgagcggtaagattagatgggatatgattaggaatgacaccatt 43491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 497 - 638
Target Start/End: Complemental strand, 7189669 - 7189529
Alignment:
Q  497 agtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatg 596  Q
    |||||||||| | |||||||||||||| ||| |||||| |||||||| ||||||| | | | |||||||  ||| |||||||||||||||| | || |||    
T  7189669 agtcagaccgacgatgttgtatggtacagagtgttgggtggttaagaaccaacacaaaaatcaagtaagcatagtggagatgaggatgttgtgttgaatg 7189570  T
Q  597 agtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |  ||||||| |||||  ||||||| || |||||||||||||    
T  7189569 accggtaagattagacgagatagga-tatgaatgacaccatt 7189529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 36514598 - 36514514
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||| ||||||||| | |||| |||||||||| ||||||||||||||||| |||||| |||||||||||| || |||||| ||||    
T  36514598 aagaaccaacacgaaaataaattaagtgtagcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaatta 36514514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 638
Target Start/End: Complemental strand, 27022098 - 27022001
Alignment:
Q  541 agagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| || |||| || | ||||||||||||  ||||| |||||||  |||||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  27022098 agagccagcatgagaatataataagtgtagcggcaatgagaatgttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacatt 27022001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 638
Target Start/End: Complemental strand, 35559368 - 35559289
Alignment:
Q  559 aagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||   |||||||||||||||| ||||||||||||||||  |||   |||||||||| |||||||||||||    
T  35559368 aagtaagtgtagtaaagatgaggatgttgcgttggatgagtggtaagatcagatttgataggattaggaatgacaccatt 35559289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 573 - 638
Target Start/End: Complemental strand, 24598506 - 24598441
Alignment:
Q  573 gagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| |||||||||| | |||||||||||||||  |||||| |||||||||| |||||||||||||    
T  24598506 gagacgaggatgttgtgttggatgagtggtaagtttagacatgataggattaggaatgacaccatt 24598441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 618
Target Start/End: Original strand, 42187365 - 42187438
Alignment:
Q  545 ccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggata 618  Q
    ||||||| ||| || |||||| ||||||||||||||||||||| | |||||| || |||||||||||| |||||    
T  42187365 ccaacacaagaatagagtaagcgtagcggagatgaggatgttgtgttggatgtgtagtaagactagacgggata 42187438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 614
Target Start/End: Original strand, 5335833 - 5335885
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacag 614  Q
    |||||||||| ||||||||||||||||| || ||| |||||||||||||||||    
T  5335833 taagtgtagcagagatgaggatgttgcgttgaatgtgtggtaagactagacag 5335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 586 - 638
Target Start/End: Complemental strand, 8492580 - 8492528
Alignment:
Q  586 tgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| ||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  8492580 tgcgttggatgagtggcaagactagacgggataggattacgaatgacaccatt 8492528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 610
Target Start/End: Complemental strand, 28542254 - 28542206
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactag 610  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  28542254 taagtgtagcggagatgagggtgttgcgttggatgtgtggtaagactag 28542206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 559 - 610
Target Start/End: Original strand, 1740705 - 1740756
Alignment:
Q  559 aagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactag 610  Q
    ||||||||||||| ||||||||||||||||| |||||| || ||||||||||    
T  1740705 aagtaagtgtagcagagatgaggatgttgcgttggatgtgtagtaagactag 1740756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 577
Target Start/End: Complemental strand, 28628357 - 28628286
Alignment:
Q  506 ggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagat 577  Q
    ||||||||||||||| ||  || ||||||||||| ||| ||||||||||| ||||||||| ||||| |||||    
T  28628357 ggcaatgttgtatggaacaaagtgttgggcggttgagaaccaacacgagaataaagtaagcgtagcagagat 28628286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 638
Target Start/End: Original strand, 39811873 - 39811944
Alignment:
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||| |||||||||||||  |||||| |||||||||||||||  ||||||||||  ||||||| ||||    
T  39811873 gtagcggatatgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacatt 39811944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 638
Target Start/End: Original strand, 36136673 - 36136751
Alignment:
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||| ||| || ||||||| |||||| | |||||| ||||||||||||||  ||||||| ||| |||||||||||||    
T  36136673 agtaagcgtatcgaagatgagaatgttgtgttggatgggtggtaagactagaagggataggtttaggaatgacaccatt 36136751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 612
Target Start/End: Original strand, 14593677 - 14593722
Alignment:
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  14593677 gtagcagagatgaggatgttgcgttggatgtgtggtaagactagac 14593722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 612
Target Start/End: Original strand, 16013200 - 16013245
Alignment:
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  16013200 gtagcagagatgaggatgttgcgttggatgtgtggtaagactagac 16013245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 638
Target Start/End: Complemental strand, 30200335 - 30200254
Alignment:
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| |||||||||| ||||||||||||||| | |||||| ||||||||| ||||  ||||| |||||  ||||||| ||||    
T  30200335 taaactaagtgtagcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacatt 30200254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 591 - 635
Target Start/End: Complemental strand, 25731695 - 25731651
Alignment:
Q  591 tggatgagtggtaagactagacaggataggattaagaatgacacc 635  Q
    ||||||| ||||||||||||||  || ||||||||||||||||||    
T  25731695 tggatgaatggtaagactagacgagaaaggattaagaatgacacc 25731651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 38135609 - 38135525
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||| ||||||| ||| ||||  ||| ||||||||||||||||| ||  | |||||| ||||||||| ||||  |||||||||||    
T  38135609 aagaaccaacactagaataaaacaagcgtagcggagatgaggatcttttgttggatgtgtggtaagattagatgggataggatta 38135525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 613
Target Start/End: Complemental strand, 40008785 - 40008737
Alignment:
Q  565 gtgtagcggagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
    ||||||||||||||| |||||||||  ||||| ||||||| ||||||||    
T  40008785 gtgtagcggagatgaagatgttgcgtaggatgtgtggtaaaactagaca 40008737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 4e-80; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 5168628 - 5168815
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  5168628 ataagaaagtaccacttaagctgaaaggaaaattctatcggacaacagtcagaccggcaatgttgtatggtacggagtgctgggcggttaagagccaaca 5168727  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  5168728 tgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgataggtaagactagacaggataggattaggaatgacaccatt 5168815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 25191179 - 25191366
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||| ||||||||| | |  ||||||||||| ||||||||||||||| ||| ||||||| |||||||| |||||    
T  25191179 ataagaaagtaccacttaagttgaaaggaaggttctatcgaacaatagtcagaccggaaatgttgtatggtacagagtgttgggctgttaagagtcaaca 25191278  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  25191279 cgagagtaaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgatatgattaagaatgacatcatt 25191366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 53519386 - 53519573
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||| |||||||||| ||||||||  ||||||||| |||||||||| |||||||||||| | |||||||| |||  |||||||||||||||||    
T  53519386 ataagaaagtatcacttaagcttaaaggaaaaatctatcggacagcagtcagatcggcaatgttgtgttgtacggagtgttaagcggttaagagccaaca 53519485  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  53519486 cgagagtaaagttagtgtagcggaaatgaggatgttgcgttggatgagtggtaatactagacaggataggattaagaatgacaccatt 53519573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 51448191 - 51448004
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||| |  ||||||||||||||||| ||| |||||||||||| |||||    
T  51448191 ataagaaagtaccacttaagttgaaaggaaagttatatcggacagcagtccgaccgacgttgttgtatggtacggagtgttaggcggttaagagtcaaca 51448092  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | || |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  51448091 tgagaatcaactaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 51448004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 52138600 - 52138787
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||  |||||||||||||| || |||||||||||||||| ||| |    
T  52138600 ataagaaaataccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacgaagtgttgggcggttaagagtcaaga 52138699  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  52138700 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 52138787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 28245237 - 28245424
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||| ||||||||||||| || |||||    
T  28245237 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtacggtacggagtgttgggcggttaaaagtcaaca 28245336  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||||||||  |||||||||||||||| |||||||||||||||||||| | ||||||||||| |||||||| ||||    
T  28245337 tgagaattaagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagactagcctggataggattaggaatgacatcatt 28245424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 451 - 613
Target Start/End: Complemental strand, 47542193 - 47542032
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||  ||||||||||||||||| ||||||| |||||||| |||||    
T  47542193 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcggtctgaccggcgttgttgtatggtacggagtgttgggcagttaagagtcaaca 47542094  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
     |||| | ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  47542093 tgagaat-aagaaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagaca 47542032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 451 - 633
Target Start/End: Original strand, 38849894 - 38850076
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||| ||||||||||||||| |||||| ||  || ||||||| | |||||| |||| | ||||||||||||||  || |||||||||||||||| |||||    
T  38849894 ataacaaagtaccacttaagttgaaagaaattttttatcggacaacagtcacaccgacgatgttgtatggtacaaagtgttgggcggttaagagtcaaca 38849993  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgaca 633  Q
    ||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  38849994 cgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtagtaagactagacatgatatgattaggaatgaca 38850076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 502 - 638
Target Start/End: Complemental strand, 33272459 - 33272323
Alignment:
Q  502 gaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtgg 601  Q
    |||||||  ||||||||||||||||| ||||||| |||||||| ||||| |||| | ||||||||||||| ||||||||||||||||  |||||||||||    
T  33272459 gaccggcgttgttgtatggtacggagtgttgggcagttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcattggatgagtgg 33272360  T
Q  602 taagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33272359 taagactagacatgataggattaagaatgacaccatt 33272323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 481 - 638
Target Start/End: Original strand, 54278850 - 54279007
Alignment:
Q  481 agttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgag 580  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||||| ||||||| |||||||| |||||  ||| | | ||||||||||| ||||||||    
T  54278850 agttctatcggacagcagtcagaccagcgttgttgtatggtacggagtgttgggcagttaagagtcaacataagaatcaggtaagtgtagcagagatgag 54278949  T
Q  581 gatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||| ||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  54278950 gatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccatt 54279007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 472 - 613
Target Start/End: Complemental strand, 43695226 - 43695085
Alignment:
Q  472 tgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagc 571  Q
    |||||| |||||||||||||| |||||| |||||||| |||||||||||||||||| |||||| |||| |||   ||||||||| | ||||||||||| |    
T  43695226 tgaaagaaaagttctatcggacagcagttagaccggcgatgttgtatggtacggagtgttgggtggttgagaattaacacgagaatcaagtaagtgtaac 43695127  T
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
     ||||||||||||||||| ||||||| ||||||||| |||||    
T  43695126 agagatgaggatgttgcgttggatgaatggtaagaccagaca 43695085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 474 - 624
Target Start/End: Original strand, 26490139 - 26490290
Alignment:
Q  474 aaaggaaagttctatcggatagcagtcagaccggcaatgttgt--atggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagc 571  Q
    |||||||| || ||||||| | ||||||||||||| |||||||  |||||| | |  ||||||||||||||| |||||| |||| | |||||||||||||    
T  26490139 aaaggaaaattatatcggacaacagtcagaccggcgatgttgtgtatggtaagtat-gttgggcggttaagaaccaacaagagaatcaagtaagtgtagc 26490237  T
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||    
T  26490238 ggagatgaggatgttgcgttggatgagtggtaagacaagacgggatatgatta 26490290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 27917372 - 27917559
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||| ||||||||||||||| |||| | ||| |||||||| | | |||||| |||||| ||||||||||||||  || | || || ||||||| |||| |    
T  27917372 ataaaaaagtaccacttaagttgaatgaaaaattctatcgaacatcagtcacaccggcgatgttgtatggtacaaagtgatgtgcagttaagaaccaaaa 27917471  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | ||||||| ||||| ||||||||||||||| | ||||||||||||||| ||||||  |||  ||||| ||||||| |||||    
T  27917472 cgagaatcaagtaagcgtagcagagatgaggatgttgtgttggatgagtggtaagcctagacgagatttgattaggaatgaccccatt 27917559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 3186569 - 3186756
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| | |||||  |||  | |||||||||| ||   || |||||||| ||||||| |||||    
T  3186569 ataagaaagtatcacttaagttgaaaggaaagttatatcggacaacagtcccaccaacgatgttgtatgatatatagtgttgggcgattaagagtcaaca 3186668  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | |||||| ||||||| ||||||| || ||  | |||||||| ||||||||| | | ||||| ||||| |||||||||||||    
T  3186669 cgagaatcaagtaaatgtagcgtagatgagaatcttatgttggatgagcggtaagacttggcgggataagattaggaatgacaccatt 3186756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 529 - 638
Target Start/End: Original strand, 45728023 - 45728133
Alignment:
Q  529 gttgggcggttaagagcc-aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaaga 627  Q
    |||||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||   |||||||||  |    
T  45728023 gttgggcggttaagagcccaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaa 45728122  T
Q  628 atgacaccatt 638  Q
    |||||| ||||    
T  45728123 atgacatcatt 45728133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 509 - 635
Target Start/End: Complemental strand, 48953819 - 48953694
Alignment:
Q  509 aatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagact 608  Q
    ||||||||||| ||||||| |||||||| |||||| ||||||| |||   |||||||||| |||||||||||||||||||| |||||||| ||||||| |    
T  48953819 aatgttgtatgttacggagtgttgggcgtttaagatccaacacaagaaacaagtaagtgt-gcggagatgaggatgttgcgttggatgagcggtaagatt 48953721  T
Q  609 agacaggataggattaagaatgacacc 635  Q
     ||   |||||||||||||||||||||    
T  48953720 ggatgagataggattaagaatgacacc 48953694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 570 - 638
Target Start/End: Original strand, 21992 - 22060
Alignment:
Q  570 gcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  21992 gcggagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgtcaccatt 22060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 638
Target Start/End: Complemental strand, 47233969 - 47233891
Alignment:
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||| |||||  ||||||||||||    
T  47233969 agtaagtgtagcgaagatgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccatt 47233891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 514 - 638
Target Start/End: Complemental strand, 49503978 - 49503849
Alignment:
Q  514 tgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcg-----ctggatgagtggtaagact 608  Q
    ||||||||| |||| ||||| |||||||||  ||||| || | | ||||||||||||||||||| |||||||||||      ||||||||||||||||||    
T  49503978 tgtatggtatggagtgttggacggttaagaatcaacatgaaaatcaagtaagtgtagcggagataaggatgttgcgttggattggatgagtggtaagact 49503879  T
Q  609 agacaggataggattaagaatgacaccatt 638  Q
    ||||  |||||||||  |||||||||||||    
T  49503878 agacgagataggattgggaatgacaccatt 49503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 546 - 638
Target Start/End: Original strand, 45236751 - 45236843
Alignment:
Q  546 caacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||| |||||||||  |||| ||||| ||||||||||| |||||| ||||||||||||||| ||||| |||||  ||||||||||||    
T  45236751 caacacgagaataaagtaagcctagccgagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgacaccatt 45236843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 54128272 - 54128365
Alignment:
Q  545 ccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||| |||| | |||||||  |||| ||||||||||||||||| | |||||||||||| |||||||  |||||||||| |||||||||||||    
T  54128272 ccaacatgagaatcaagtaagcttagcagagatgaggatgttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccatt 54128365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 634
Target Start/End: Original strand, 30345386 - 30345506
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    ||||| ||| |||||||| | ||||||||||||| |||||| ||    ||| ||||| |||||||||||||||||||| | |||||||| ||||||| |     
T  30345386 atgttatattgtacggagtgatgggcggttaagaaccaacatga----aaattaagtatagcggagatgaggatgttgtgttggatgagcggtaagattg 30345481  T
Q  610 gacaggataggattaagaatgacac 634  Q
    |||| ||||| |||| |||||||||    
T  30345482 gacatgatagaattatgaatgacac 30345506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 554
Target Start/End: Complemental strand, 40674595 - 40674492
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||| |||||||| |||||||||| |||||||| ||| ||| |||| |  ||||||||||| |||||||| ||||| | | |||||  |||||    
T  40674595 ataagaaagtatcacttaagttgaaaggaaaattctatcgaatatcaggcagatcaacaatgttgtatagtacggagtgttggactgataagaatcaaca 40674496  T
Q  551 cgag 554  Q
    ||||    
T  40674495 cgag 40674492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 624
Target Start/End: Original strand, 43308416 - 43308539
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    |||||||  ||||||||||| | |||| |||||||||| |||| ||||||||||| |||| |||  ||| | |||| || | ||||||| || ||  |||    
T  43308416 agaccggtgatgttgtatgggatggagtgttgggcggtaaagaaccaacacgagaataaaataatcgtaaccgagacgaaggtgttgcgttgaatttgtg 43308515  T
Q  601 gtaagactagacaggataggatta 624  Q
    ||||||||||||| ||||||||||    
T  43308516 gtaagactagacatgataggatta 43308539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 624
Target Start/End: Complemental strand, 345115 - 345020
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||| |||||||||| ||||||| ||| |||||||||  ||||||| || ||||||||  | |||||  |||||||||||||||  ||||||||||    
T  345115 gttgagcggttaagaaccaacacaagaataaagtaagcatagcggaaattaggatgttatgttggatttgtggtaagactagacgagataggatta 345020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 624
Target Start/End: Complemental strand, 2341118 - 2341023
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||||| ||| ||||  |||| ||||| |||| ||||  ||| |||||||||||||||||  |||||| |||||||||||||||| ||||| ||||    
T  2341118 gttgggtggtaaagaatcaacgcgagaataaaataaggatagtggagatgaggatgttgcattggatgtgtggtaagactagacatgatagaatta 2341023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 624
Target Start/End: Complemental strand, 46367807 - 46367692
Alignment:
Q  511 tgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctgg--atgagtggtaagact 608  Q
    |||||||||  | |||| ||||| |||| | || ||||||||||| |||| |||||||||  ||||||||||||||| | |||  ||| |||||||||||    
T  46367807 tgttgtatgtgaaggagtgttggacggtaatgaaccaacacgagaataaaataagtgtagtagagatgaggatgttgtgttggatatgtgtggtaagact 46367708  T
Q  609 agacaggataggatta 624  Q
    | |||  |||||||||    
T  46367707 aaacattataggatta 46367692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 620
Target Start/End: Complemental strand, 46432032 - 46431984
Alignment:
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagacaggatagg 620  Q
    ||||||| |||||||||  |||||| |||||||||||||||||||||||    
T  46432032 ggagatggggatgttgcattggatgtgtggtaagactagacaggatagg 46431984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 624
Target Start/End: Original strand, 19736918 - 19736969
Alignment:
Q  573 gagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||| ||||||| | |||||||||||||||||||||| ||||| |||||    
T  19736918 gagatgatgatgttgtgttggatgagtggtaagactagacgggatacgatta 19736969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 576 - 638
Target Start/End: Complemental strand, 19676447 - 19676385
Alignment:
Q  576 atgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||  |||||||| ||||||||||||  ||||| ||||| || ||||||||||    
T  19676447 atgaggatgttgcattggatgagcggtaagactagatgggataagattaggagtgacaccatt 19676385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 574 - 624
Target Start/End: Complemental strand, 38054696 - 38054646
Alignment:
Q  574 agatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||| |||||||| || ||| ||||||||||||||| |||||||||||    
T  38054696 agatgagaatgttgcgttgaatgggtggtaagactagacgggataggatta 38054646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 612
Target Start/End: Original strand, 46568027 - 46568077
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    |||||||||| ||||||||||||||| | |||||| ||| |||||||||||    
T  46568027 taagtgtagcagagatgaggatgttgtgttggatgtgtgttaagactagac 46568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 622
Target Start/End: Original strand, 50249278 - 50249352
Alignment:
Q  548 acacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggat 622  Q
    |||||||| |||| ||||  |||||||||||| |||||| || |||||| |||||| ||||||||  ||||||||    
T  50249278 acacgagaataaaataagcatagcggagatgatgatgtttcgttggatgtgtggtaggactagacgagataggat 50249352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 612
Target Start/End: Original strand, 29919180 - 29919265
Alignment:
Q  527 gagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    |||||||  ||| |||| ||||||||||| |||| | ||||||| |||||||| ||||||| | |||||| |||||| || |||||    
T  29919180 gagttggagggtgaagaaccaacacgagaataaaatcagtgtagtggagatgacgatgttgtgttggatgtgtggtacgattagac 29919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 612
Target Start/End: Original strand, 29968333 - 29968418
Alignment:
Q  527 gagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    |||||||  ||| |||| ||||||||||| |||| | ||||||| |||||||| ||||||| | |||||| |||||| || |||||    
T  29968333 gagttggagggtgaagaaccaacacgagaataaaatcagtgtagtggagatgacgatgttgtgttggatgtgtggtacgattagac 29968418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 638
Target Start/End: Complemental strand, 48734481 - 48734428
Alignment:
Q  585 ttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| |||||||||||||| ||||| | ||||| ||||| |||||||||||||    
T  48734481 ttgcgttggatgagtggtaaaactaggcgggataagattatgaatgacaccatt 48734428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 568 - 620
Target Start/End: Complemental strand, 42510376 - 42510324
Alignment:
Q  568 tagcggagatgaggatgttgcgctggatgagtggtaagactagacaggatagg 620  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||  |||||||    
T  42510376 tagcagagatgaggatgttgcattggatgtgtggtaagactagatgggatagg 42510324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 4e-80; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 11992588 - 11992401
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | |||||||||||||| |||||    
T  11992588 ataagaaagtaccacttaagctgaaaggaaagttctatcggacagcagtctgaccggcaatgttgtatggtacggagtgatgggcggttaagagtcaaca 11992489  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||    
T  11992488 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaatactagacatgataagattaggaatgacaccatt 11992401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 41197710 - 41197523
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||| ||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||  || ||||||||||||||||||||||    
T  41197710 ataaaaaagtaccacttaagctgaaaggaaagttctatcgaacaacagtcagaccagcaatgttgtatggtacaaagtgttgggcggttaagagccaaca 41197611  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  41197610 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctagatgagtggtaagactagacatgataggattaggaatgacaccatt 41197523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 41763523 - 41763336
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||| ||||||||||||||||| | | || ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  41763523 ataagaaagtaccacttaagctaaaaggaaagttctatcgaagaacaatcagaccggcaatgttgtatggtacagagtgttgggcggttaagaaccaaca 41763424  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  41763423 cgagagtaaagtaagtgtagcggagatgaggatgttgcgatggatgagtggtaagactagacaagataggattaggaatgacaccatt 41763336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 45368106 - 45367919
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||| ||||||||| | |||||| |||||||||||||    
T  45368106 ataagaaagtaccacttaagctgaaaggaaagttttatcggacaacagtcagaccgacaatgttgtaaggtacggagtgctgggcgattaagagccaaca 45368007  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  45368006 cgagagtaaagtaagtataacggagatgatgatgttgcgctggatgaatggtaagactagacaagataggattaagaatgacaccatt 45367919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 467 - 638
Target Start/End: Original strand, 38429700 - 38429871
Alignment:
Q  467 taagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagt 566  Q
    |||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  38429700 taagctaaaaggaaagttctatcagacagcagtcaaaccggcaatgttgtatggtacggagtgttgggcggttaagaaccaacacgagagtagagtaagt 38429799  T
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  38429800 gtagcggagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 38429871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 2610328 - 2610515
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||  ||||||||||||||||| |||||||||||||||| |||||    
T  2610328 ataagaaagtaccacttaagttgaaaggaaagttctatcggacaacagtcagactggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 2610427  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  2610428 tgagaatcaagtaagtgtagcagagatgaggatgctgcgttggatgagtggtaagactagacaggacaggattaggaatgacaccatt 2610515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 23997420 - 23997604
Alignment:
Q  454 agaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacga 553  Q
    ||||| ||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||||| || ||||||| |||||||| ||||||||    
T  23997420 agaaaataccacttaagctgaaaggaaagttctatcggacaacagtaagaccgacaatgttgtatggtacgaagtgttgggcagttaagagtcaacacga 23997519  T
Q  554 gagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  23997520 gagccaagtaagtgtaacggagatgaagatgttgcgctggatgagtggtaagactagacatgatcggattaggaatgacaccatt 23997604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 8180580 - 8180767
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||  ||||||||||||||||| ||||| |||||||||| |||||    
T  8180580 ataagaaagtaccacttaagttgaaaggaaagttctatcggacatcagtcagaccagcgttgttgtatggtacggagtgttggacggttaagagtcaaca 8180679  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  8180680 tgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 8180767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 3865872 - 3866059
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||| ||||||| ||||||||||||||||||||| | ||||||||||| |  ||||||||||||||||| ||||| |||||||||| |||||    
T  3865872 ataagaaagtactacttaagttgaaaggaaagttctatcggacaacagtcagaccgacgttgttgtatggtacggagtgttggacggttaagagtcaaca 3865971  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3865972 tgagaatcaagtaagtgtagcagagatgatgatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 3866059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 464 - 634
Target Start/End: Original strand, 36183264 - 36183434
Alignment:
Q  464 acttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagta 563  Q
    ||||||| ||||||||||||||||||||| | ||||| |||||||  ||||||||||||||||| |||||||||||||||| ||||| |||| | |||||    
T  36183264 acttaagttgaaaggaaagttctatcggacaacagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagta 36183363  T
Q  564 agtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacac 634  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  36183364 agtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacac 36183434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 451 - 624
Target Start/End: Complemental strand, 452104 - 451931
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |  ||||||||||||||||| |||||||||||||||| |||||    
T  452104 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccgacgttgttgtatggtacggagtgttgggcggttaagagtcaaca 452005  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
     |||| | ||||||||||||| |||||||| |||||||| | ||||||||||||||||||||| ||||||||||    
T  452004 tgagaatcaagtaagtgtagcagagatgagtatgttgcgttagatgagtggtaagactagacatgataggatta 451931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 451 - 623
Target Start/End: Original strand, 30743423 - 30743595
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||| || |||||||| ||||||||| | |||||||||||||||||||||| |||| |||| ||||||||    
T  30743423 ataagaaagtaccacttaagttgaaaggaaagttttaccggatagcggtcagaccgacgatgttgtatggtacggagagttaggcgattaaaagccaaca 30743522  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatt 623  Q
    ||||| | |||||||||| | |||||||||||||||||||  |||||||| ||||||||||| ||||||||||    
T  30743523 cgagaatcaagtaagtgttgtggagatgaggatgttgcgcatgatgagtgctaagactagacgggataggatt 30743595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 3244133 - 3243946
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||  ||||| ||||||||||| ||||| | |||||||| |||||    
T  3244133 ataagaaagtaccacttatgttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgaatggtacggagtgttggacagttaagagtcaaca 3244034  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||| ||||||||||| ||||||||| ||||||||| ||| |||||||||| |||||||||||||    
T  3244033 tgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtagtaagactacacatgataggattatgaatgacaccatt 3243946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 4807392 - 4807579
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||| |  |||||||||  || ||| |||| ||||||||||| |||||    
T  4807392 ataagaaagtaccatttaagttgaaaggaaagttctatcggacagcagtccgaccgacgttgttgtatgacacagagtgttgagcggttaagagtcaaca 4807491  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| |||||||| ||||    
T  4807492 tgagaattaagtaagtgtagcagagatgaggatgttgcgttggatgaatggtaagaatagacatgataggattatgaatgacatcatt 4807579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 453 - 638
Target Start/End: Original strand, 12734508 - 12734688
Alignment:
Q  453 aagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacg 552  Q
    |||||||||||||||||| |||||||||||||||||| || | |||||| |||  | |||||||||||||| ||| ||||||||||| |||||||||| |    
T  12734508 aagaaagtaccacttaagttgaaaggaaagttctatc-gacaacagtcaaaccatcgatgttgtatggtacagagtgttgggcggtttagagccaacatg 12734606  T
Q  553 agagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||    ||  |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  12734607 ag----aatcaagtgtagtggagatgaggatgttgtgctggatgagtggtaagactagacgggataggattagaaatgacaccatt 12734688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 453 - 635
Target Start/End: Complemental strand, 24584086 - 24583904
Alignment:
Q  453 aagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacg 552  Q
    |||||| ||||||||||| |||||| |||||||| |  ||||| |  ||||||| | ||||||||||||||  |  |||||||||||||||| |||||||    
T  24584086 aagaaaataccacttaagttgaaagaaaagttctgttagatagtatccagaccgacgatgttgtatggtacaaaatgttgggcggttaagagtcaacacg 24583987  T
Q  553 agagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacc 635  Q
    ||| | ||||||||||||| ||||||| ||||||| || |||||||||||||||||| ||| |||| ||||||||||||||||    
T  24583986 agaatcaagtaagtgtagcagagatgaagatgttgtgcgggatgagtggtaagactaaacatgatatgattaagaatgacacc 24583904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 460 - 636
Target Start/End: Complemental strand, 6238227 - 6238051
Alignment:
Q  460 taccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaa 559  Q
    ||||||||||| ||||| |||| |||||||||| | |||| |||| | | |||||||||||||||||| |||||| ||||||||| |||||||||| | |    
T  6238227 taccacttaagttgaaaagaaaattctatcggacaacagttagactgacgatgttgtatggtacggagtgttgggtggttaagagtcaacacgagaatca 6238128  T
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacca 636  Q
    | ||| || |||| |  |||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  6238127 aataattgcagcgaatgtgaggatgttgcgctggatgagcggtaagactagacatgatagaattaggaatgacacca 6238051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 451 - 635
Target Start/End: Complemental strand, 16097476 - 16097288
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcgg----ttaagagcc 546  Q
    ||||||| |||||||||||| ||||||||||||||||||  | |||||||||||| |   |||||||||||||| |   |||| |||    |||||||||    
T  16097476 ataagaaggtaccacttaagttgaaaggaaagttctatcaaacagcagtcagaccagtgttgttgtatggtacgaaatcttggacggacggttaagagcc 16097377  T
Q  547 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacc 635  Q
    |||| |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||  |||||||||    
T  16097376 aacatgagaatcaagtaagtgtagcggagatgaggatgttgcactggatgagtggtaagactagatgggatatgattagaaatgacacc 16097288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 565 - 638
Target Start/End: Complemental strand, 38453057 - 38452984
Alignment:
Q  565 gtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  38453057 gtgtagcagacatgaggatgttgcgttggatgagtggtaagactagacatcataggattaggaatgacaccatt 38452984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 634
Target Start/End: Original strand, 7825254 - 7825341
Alignment:
Q  547 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacac 634  Q
    |||| |||| ||||||||| ||||| ||||| ||||||||||| |||||| ||||||||||||||| ||||| |||||  ||||||||    
T  7825254 aacatgagaataaagtaagcgtagcagagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgacac 7825341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 537 - 624
Target Start/End: Complemental strand, 19337245 - 19337157
Alignment:
Q  537 gttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagac-tagacaggataggatta 624  Q
    |||||||  |||||||||| |||| |||| |||| ||||||||||||||| || |||||| |||||||||| ||| |||||||||||||    
T  19337245 gttaagaatcaacacgagaataaaataagcgtagtggagatgaggatgttacgttggatgtgtggtaagacttaggcaggataggatta 19337157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 38453102 - 38453061
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcgga 492  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  38453102 ataagaaagtaccacttaagttgaaaggaaagttctatcgga 38453061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 638
Target Start/End: Original strand, 13149172 - 13149300
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    |||||||| ||||| ||| ||  || |||||||| ||||||||| | | ||| ||||||| | ||||||||| ||||| | ||||  |||||||||||||    
T  13149172 atgttgtacggtacagagtgtcaggtggttaagaaccaacacgaaaatcaagcaagtgtaacagagatgagggtgttgtgttggacaagtggtaagacta 13149271  T
Q  610 gacaggataggattaagaatgacaccatt 638  Q
     |  ||||| ||||| |||||||||||||    
T  13149272 aaagggataagattaggaatgacaccatt 13149300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 530 - 638
Target Start/End: Original strand, 17581348 - 17581455
Alignment:
Q  530 ttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaat 629  Q
    ||||| |||||||| ||||||||| | |||||||||||| |||  |||| |||||||  | |||||| |||||||||||||| | |||| |||||| |||    
T  17581348 ttgggaggttaagaaccaacacgaaaataaagtaagtgt-gcgaggatggggatgttttgttggatgtgtggtaagactagatatgataagattaaaaat 17581446  T
Q  630 gacaccatt 638  Q
    |||| ||||    
T  17581447 gacaacatt 17581455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 564
Target Start/End: Original strand, 32443436 - 32443527
Alignment:
Q  472 tgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaa 564  Q
    |||||| ||| |||||||| |||||||||| |||  |||||||||||||||| ||| |||||| ||||||||  |||||||||| | ||||||    
T  32443436 tgaaagaaaaattctatcgtatagcagtcaaacca-caatgttgtatggtacagagtgttgggtggttaagaatcaacacgagaatcaagtaa 32443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 611
Target Start/End: Complemental strand, 9647981 - 9647927
Alignment:
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    |||| ||| |||||| ||||||||||||||||| |||||| ||||||||||||||    
T  9647981 taaattaaatgtagcagagatgaggatgttgcgttggatgtgtggtaagactaga 9647927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 586
Target Start/End: Complemental strand, 28908546 - 28908489
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgtt 586  Q
    |||||| ||| |||| ||| |||||||||||| ||||||||||||||||||| |||||    
T  28908546 gttgggtggtaaagaaccagcacgagagtaaaataagtgtagcggagatgagaatgtt 28908489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 632
Target Start/End: Complemental strand, 23714651 - 23714559
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgac 632  Q
    |||| ||||||||| | |||| ||||  |||| ||||| || |||||| | |||||| ||||||||||||||||  |||||||||| ||||||    
T  23714651 aagaaccaacacgaaaataaattaagcatagcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgac 23714559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 632
Target Start/End: Complemental strand, 24102323 - 24102231
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgac 632  Q
    |||| ||||||||| | |||| ||||  |||| ||||| || |||||| | |||||| ||||||||||||||||  |||||||||| ||||||    
T  24102323 aagaaccaacacgaaaataaattaagcatagcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgac 24102231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 45077665 - 45077709
Alignment:
Q  568 tagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||    
T  45077665 tagctgagatgaggatgttgcgttggatgtgtggtaagactagac 45077709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 609
Target Start/End: Original strand, 1456095 - 1456191
Alignment:
Q  511 tgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    |||| ||||| |||||| |||||  ||| |||| ||||||  ||| |||| |||||||||||||||||||||||||| | |||||| ||| || |||||    
T  1456095 tgttatatgggacggagtgttggaaggtaaagaaccaaca--agaataaaataagtgtagcggagatgaggatgttgtgttggatgtgtgctaggacta 1456191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 564 - 638
Target Start/End: Complemental strand, 9556737 - 9556663
Alignment:
Q  564 agtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| |||| ||||||||||| | |||||| ||||||||| ||||| ||||| |||||  ||||||| ||||    
T  9556737 agtgtagtggagttgaggatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacatt 9556663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 638
Target Start/End: Complemental strand, 18424716 - 18424670
Alignment:
Q  592 ggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||||    
T  18424716 ggatgagtggtaagactagatatgatatgattaagaatgataccatt 18424670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 612
Target Start/End: Original strand, 38434866 - 38434912
Alignment:
Q  566 tgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    |||||||||||||||||||||||  |||||| ||||||| |||||||    
T  38434866 tgtagcggagatgaggatgttgcattggatgcgtggtaaaactagac 38434912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 632
Target Start/End: Complemental strand, 4598930 - 4598865
Alignment:
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgac 632  Q
    ||||| || |||| ||||||||| |||||| ||||||||||||||| |||||| ||| | ||||||    
T  4598930 gtagcagaaatgatgatgttgcgttggatgtgtggtaagactagacgggatagaattcaaaatgac 4598865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 602
Target Start/End: Complemental strand, 13592695 - 13592627
Alignment:
Q  533 ggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggt 602  Q
    ||||||||||| |||||| |||| |||||||||||| | ||||||| |||||||| | |||||| |||||    
T  13592695 ggcggttaagaaccaacaagagaataaagtaagtgt-gtggagatggggatgttgtgttggatgtgtggt 13592627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 2e-79; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 451 - 637
Target Start/End: Complemental strand, 42854486 - 42854300
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  42854486 ataagaaagtaccacttaagctgaaaggaaaattctatcggacagcagtcagaccgacaatgttgtatggtacggagtgttgggcggttaagagccaaca 42854387  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccat 637  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  42854386 cgagagtaaagttagtgtagcggagatgacgatgttgcgctggataagtggtaagactagacagaataggattaggaatgacaccat 42854300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 452 - 638
Target Start/End: Complemental strand, 15215752 - 15215566
Alignment:
Q  452 taagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacac 551  Q
    |||||||||| |||||||||||||||||||||||||||| | || ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  15215752 taagaaagtatcacttaagctgaaaggaaagttctatcgaacagtagtcagaccgaaaatgttgtatggtacggagtgttgggcggttaagagccaacac 15215653  T
Q  552 gagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  15215652 gagagtaaagtaagtgaagcggagatgaggatgttgtgctggatgagtggtaagactatacaggataggattagaaatgacaccatt 15215566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 36565723 - 36565536
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||| ||| |    
T  36565723 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaata 36565624  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36565623 tgagaatcaagtaagtgtagcagagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36565536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 39946657 - 39946844
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||  |||||||||||||||| |||||    
T  39946657 ataagaaagtaccacttaaattgaaaggaaagttctatcggacagcagtcaggccggcgatgttgtatggtacggaatgttgggcggttaagagtcaaca 39946756  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  39946757 cgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccatt 39946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 462 - 638
Target Start/End: Complemental strand, 18752344 - 18752168
Alignment:
Q  462 ccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaag 561  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  18752344 ccacttaagctcaaaggaaagttctatcggacaacagtcagaccggcaatgttgtatggtacggagtgctggacggttaagagccaacacgagagtaaag 18752245  T
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||  ||||||||| | |||||||||||    
T  18752244 taagtgtagcggagatgagaatgttgcgctgaatgagtgttaagactagacataataggattagggatgacaccatt 18752168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 36395435 - 36395245
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  36395435 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 36395336  T
Q  551 cgagagtaaagtaag---tgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||   |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36395335 tgagaatcaagtaagtgttgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36395245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 12492324 - 12492137
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||  ||||| ||||||||||| |||||||||||||||| |||||    
T  12492324 ataagaaagtaccacttaagatgaaaggaaagttctatcggacagccgtccgaccggcgttgttgcatggtacggagtgttgggcggttaagagtcaaca 12492225  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | | ||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  12492224 tgagaatcatgtaagtgtagcagatatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccatt 12492137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 18124976 - 18125162
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||| | ||||||||||||||||||||| | ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  18124976 ataagaaagtaccactta-gttgaaaggaaagttctatcggacaacagtcagaccaacaatgttgtatggtacggagtgttgggcggttaagagccaaca 18125074  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||||||||||||||||| |||||||||||||||||||  ||||| ||||| ||||||||||  ||||||||||||    
T  18125075 tgagaatcaagtaagtgtagcggagatgagcatgttgcgctggatgagtgacaagacgagacatgataggattagaaatgacaccatt 18125162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 37077565 - 37077752
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||| |||||||||||||| ||||||| ||||| | || || | ||||||||||| | ||| |||||||||||||| ||||||| ||||||||||||||    
T  37077565 ataagtaagtaccacttaagttgaaagggaagttatgtcagacaacagtcagaccgtcgatgctgtatggtacggagtgttgggcagttaagagccaaca 37077664  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||||    
T  37077665 cgagaatcaagtaagtgtggcggagatgaggatgttgcgctggatgagtggtaaaactagacgagataggattaggaatgacaccatt 37077752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 36544952 - 36545134
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||     ||| ||  ||||||||||||| ||| |||||| ||||||||| |||||    
T  36544952 ataagaaagtaccacttaagttgaaaagaaagttctatcggatagca-----accagcgttgttgtatggtaccgagtgttgggtggttaagagtcaaca 36545046  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  36545047 tgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 36545134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 25288702 - 25288889
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||| ||||| ||||||||||||||||||  | | ||||  ||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  25288702 ataagaaagtaccaattaagttgaaaggaaagttctatcacacaacagttcgaccggcgatgttgtatgctacggagtgttgggcggttaagagccaaca 25288801  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | || |||||||||| || |||||||||||| ||||||| |||||||||||||||   |||||||||| ||| |||||||||    
T  25288802 cgagaatcaaataagtgtagcagatatgaggatgttgagctggattagtggtaagactagatgagataggattaggaaggacaccatt 25288889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 25300037 - 25300224
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||| ||||| ||||||||||||||||||  | | ||||  ||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  25300037 ataagaaagtaccaattaagttgaaaggaaagttctatcacacaacagttcgaccggcgatgttgtatgctacggagtgttgggcggttaagagccaaca 25300136  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | || |||||||||| || |||||||||||| ||||||| |||||||||||||||   |||||||||| ||| |||||||||    
T  25300137 cgagaatcaaataagtgtagcagatatgaggatgttgagctggattagtggtaagactagatgagataggattaggaaggacaccatt 25300224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 2796355 - 2796544
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||| ||| ||| | |||| |||||| |  |||| |||||||| |||  ||||| ||||||||| |||||    
T  2796355 ataagaaagtaccacttaagttgaaaggaaagttatattggacaacagttagaccgacgttgttatatggtaccgagtcttgggtggttaagagtcaaca 2796454  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagac--tagacaggataggattaagaatgacaccatt 638  Q
    ||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||    
T  2796455 cgagaatcaagtaagtgtagcaaagatgaggatgttgcgctggatgagtggtaagactatagacatgataggattaggaatgacaccatt 2796544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 451 - 634
Target Start/End: Complemental strand, 8879916 - 8879739
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| |||||| |||||||||||||| ||||||||||||  | ||||||||||       | |||||||||| |||||||| ||    
T  8879916 ataagaaagtaccacttaagttgaaagaaaagttctatcggacagcagtcagacctactatgttgtatgt------gtgttgggcggtgaagagccagca 8879823  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacac 634  Q
    | ||| | |||||||||||||||||||||| ||||||| || ||| |||||||||||| |||  |||||||||| |||||||||    
T  8879822 caagaatcaagtaagtgtagcggagatgagaatgttgcacttgataagtggtaagactggactagataggattaggaatgacac 8879739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 552 - 677
Target Start/End: Original strand, 40813223 - 40813348
Alignment:
Q  552 gagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccattnnnnnnnnnnnnt 651  Q
    |||| ||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||            |    
T  40813223 gagaataaagtaagtgtagcagagattaggatgttgtgttggatgagtggtaagactagacataataggattaagaatgacaccattagagagagagagt 40813322  T
Q  652 gggggtagcacctatagtagaaaagt 677  Q
    ||||||||||||||||||||||||||    
T  40813323 gggggtagcacctatagtagaaaagt 40813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 452 - 638
Target Start/End: Original strand, 29735610 - 29735793
Alignment:
Q  452 taagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacac 551  Q
    |||||||| ||  |||||| ||||| |||| |||||||||| || ||||||| ||   |||||||||||||  ||| |||| | | |||| | |||||||    
T  29735610 taagaaagcactgcttaagttgaaatgaaaattctatcggacagtagtcagaacg---atgttgtatggtaaagagtgttgagtgattaaaaaccaacac 29735706  T
Q  552 gagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| | || |||| |||| |||||||||||||||| | ||||||| ||||||||||||||  || || ||||||||| ||||||||    
T  29735707 gagaatgaaataagcgtagtggagatgaggatgttgtgttggatgaatggtaagactagacgagaaagaattaagaataacaccatt 29735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 451 - 521
Target Start/End: Complemental strand, 4032976 - 4032907
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggt 521  Q
    |||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||| ||| ||||||||||    
T  4032976 ataagaaagtaccacttaagttgaaaggaaagttttatcggacaacagtcagaccgacaa-gttgtatggt 4032907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 632
Target Start/End: Complemental strand, 9905309 - 9905187
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    ||||||||||||||  || ||||| ||||||| | ||||||||||| |||||| ||| || ||||||||||||||||||  ||||||  | |||||| ||    
T  9905309 atgttgtatggtacatagtgttggacggttaataaccaacacgagaataaagttagtataacggagatgaggatgttgcattggatgtctagtaagaata 9905210  T
Q  610 gacaggataggattaagaatgac 632  Q
    || ||||||  |||| |||||||    
T  9905209 gaaaggatataattatgaatgac 9905187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 638
Target Start/End: Complemental strand, 30783471 - 30783335
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    ||||| || ||||||||||| ||  || |||||||| | |||| ||||||||| | || | ||||||||| |||||||||||| ||||| |||||  |||    
T  30783471 agaccagcgatgttgtatggaacaaagtgttgggcg-tgaagaaccaacacgataatagaataagtgtagtggagatgaggatcttgcgttggatctgtg 30783373  T
Q  601 gtaagactagacaggataggattaagaatgacaccatt 638  Q
    | ||||||||| ||||||||||||  ||||||| ||||    
T  30783372 gcaagactagataggataggattagaaatgacaacatt 30783335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 569 - 638
Target Start/End: Original strand, 45419157 - 45419226
Alignment:
Q  569 agcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||  ||||| ||||| |||||||||||||    
T  45419157 agcggagatgaagatgttgcgttggattagtggtaagactagaagggataagattaggaatgacaccatt 45419226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 633
Target Start/End: Complemental strand, 13172072 - 13171949
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    |||||||||||||| ||| ||||||||||||||| ||||||  | | |||| ||||   | | |||||||| |||||||  |||||| || |||||||||    
T  13172072 atgttgtatggtacagagtgttgggcggttaagaaccaacataaaaataaattaagcacatcagagatgagaatgttgcattggatgtgtagtaagacta 13171973  T
Q  610 gacaggataggattaagaatgaca 633  Q
    ||| |||||||||||  |||||||    
T  13171972 gacgggataggattagaaatgaca 13171949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 638
Target Start/End: Original strand, 13986383 - 13986481
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| ||||||||||| | | |||||  ||||||||||||||||||| | ||||||||||||||| |||||||  ||||  |||| |||||||| ||||    
T  13986383 aagaaccaacacgagaatcaggtaagcatagcggagatgaggatgttacactggatgagtggtaatactagacgagatataattaggaatgacatcatt 13986481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 508
Target Start/End: Original strand, 25439336 - 25439393
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggc 508  Q
    |||||||||||||||||||| ||||||||||||||||||  | | |||||||||||||    
T  25439336 ataagaaagtaccacttaagttgaaaggaaagttctatcacacaacagtcagaccggc 25439393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 621
Target Start/End: Complemental strand, 39760845 - 39760736
Alignment:
Q  512 gttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    ||||||||| |||| | ||||| |||| |||| |||| ||||||  |||  ||||||||| ||||||||||||||| | |||||| |||||| || ||||    
T  39760845 gttgtatgggacggggtgttggacggtaaagaaccaatacgagaaaaaatgaagtgtagcagagatgaggatgttgtgttggatgtgtggtaggattaga 39760746  T
Q  612 caggatagga 621  Q
    || |||||||    
T  39760745 caagatagga 39760736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 565
Target Start/End: Complemental strand, 17492058 - 17491994
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaag 565  Q
    |||||||| ||||||||||  | |||| ||||||||||||||| ||||||||||| |||||||||    
T  17492058 agaccggcgatgttgtatgcaatggagtgttgggcggttaagaaccaacacgagaataaagtaag 17491994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 574 - 638
Target Start/End: Original strand, 29520583 - 29520647
Alignment:
Q  574 agatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||| |||||| ||||||||||||||  |||||||||||  ||||| ||||||    
T  29520583 agatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaatgataccatt 29520647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 633
Target Start/End: Complemental strand, 2518814 - 2518691
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaag-taagtgtagcggagatgaggatgttgcgctggatgagtggtaagact 608  Q
    ||||||||||| || ||||||||||| || |||| |||| | ||||  |||  |||||||||||| |||||| |||||||  |||||| |||||||||||    
T  2518814 atgttgtatggaacagagagttgggcagtgaagaaccaatatgagaaaaaaaataagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagact 2518716  T
Q  609 agacaggataggattaagaatgaca 633  Q
    |||   ||||||||||  |||||||    
T  2518715 agatgagataggattagaaatgaca 2518691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 607
Target Start/End: Complemental strand, 30456580 - 30456537
Alignment:
Q  564 agtgtagcggagatgaggatgttgcgctggatgagtggtaagac 607  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||    
T  30456580 agtgtagcagagatgaggatgttgcgttggatgtgtggtaagac 30456537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 624
Target Start/End: Original strand, 36069537 - 36069616
Alignment:
Q  545 ccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||||||| || |||| |||||| |||| | | |||||||||| | |||||| ||||||||||||||| ||||| |||||    
T  36069537 ccaacacgggaataaaataagtgcagcgcaaacgaggatgttgtgttggatgtgtggtaagactagacgggataagatta 36069616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 624
Target Start/End: Original strand, 36143247 - 36143342
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||||||||| |||| ||||||||||| |||| | |  ||||| ||||||||||||||| | |||  | ||||||||||||||   ||||||||||    
T  36143247 gttgggcggtgaagaaccaacacgagaataaaatcaacgtagcagagatgaggatgttgtgttggtcgtgtggtaagactagatgagataggatta 36143342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 624
Target Start/End: Complemental strand, 38328215 - 38328116
Alignment:
Q  525 gagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||||||| || |||| ||||||| |   |||||||||||||| |||||||| |||||| || ||||||  |||| |||||| | ||||||| ||||    
T  38328215 gagagttgggcagtaaagaaccaacacaaacataaagtaagtgtagtggagatgacgatgttacgttggatgtatggtgagactaaagaggatagaatta 38328116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 611
Target Start/End: Complemental strand, 45512889 - 45512818
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    |||| ||||||||| | |||| ||||  ||||||||||||| ||||| || |||||| ||||||||||||||    
T  45512889 aagaaccaacacgaaaataaaataagcatagcggagatgagaatgtttcgttggatgtgtggtaagactaga 45512818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 638
Target Start/End: Complemental strand, 6510798 - 6510721
Alignment:
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||| ||||| ||||||| | ||||| |||||||||||||||   |||| |||||  ||||||||||||    
T  6510798 agtaagtgtagcgg-gatgatgatgttgtgttggataagtggtaagactagatgagatatgattagaaatgacaccatt 6510721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 624
Target Start/End: Original strand, 13589347 - 13589412
Alignment:
Q  559 aagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||| |||||  |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||||    
T  13589347 aagtaagcgtagcatagatgaagatgttgcgctagatgattggtaagaatagacgggatatgatta 13589412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 578 - 611
Target Start/End: Original strand, 25439394 - 25439427
Alignment:
Q  578 gaggatgttgcgctggatgagtggtaagactaga 611  Q
    |||||||||||||||||| |||||||||||||||    
T  25439394 gaggatgttgcgctggattagtggtaagactaga 25439427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 9e-78; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 9706576 - 9706763
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || ||| || ||||||||| |||||    
T  9706576 ataagaaagtaccacttaagctgaaaggaaagttctatcgaacagcagtcagaccggcaatgttgtatggtacgaagtgttaggtggttaagagtcaaca 9706675  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  9706676 cgagagtaaagtaagtgtagcggagatgaggatgttgcactggatgagtggtaagactagacatgataggattaggaatgacaccatt 9706763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 454 - 677
Target Start/End: Complemental strand, 5258629 - 5258406
Alignment:
Q  454 agaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacga 553  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  5258629 agaaagtaccacttaagctgaaaggaaagttctatcggacaacagtcagaccggcaatgttgtatggtacggagtgttgggcggcgaagagccaacacga 5258530  T
Q  554 gagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccattnnnnnnnnnnnntgg 653  Q
    ||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||            |||    
T  5258529 gagcaaagtaagtgtagcggaggtgagaatgttgcgttggatgagtggtaagactagacaagataggattatgaatgacaccgttagagagagagagtgg 5258430  T
Q  654 gggtagcacctatagtagaaaagt 677  Q
    ||||||||||||||||||||||||    
T  5258429 gggtagcacctatagtagaaaagt 5258406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 461 - 638
Target Start/End: Original strand, 607969 - 608146
Alignment:
Q  461 accacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaa 560  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  607969 accacttaaactgaaagaaaagttctatcggacagcagtcagaccggcaatgttgtattgtacggagtgttgggcggttaagagccaacacgagaataaa 608068  T
Q  561 gtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  608069 gtaagtgtagcggagatgaggatgttccgttggatgagtggtaagactagataggataggattaggaatgacaccatt 608146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 5631618 - 5631805
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||     
T  5631618 ataagaaagtaccacttaagctgaaaggaaaattctatcggacaacagtcagaccgacaatgttgtatggtatggagtgttgggcggttaagagccaacg 5631717  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  5631718 cgagagtaaagtaagtgtagcgaagatgaggatgttgtgttggatgagtggtaagactagaccggatatgattaggaatgacaccatt 5631805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 14030606 - 14030794
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||| ||||||||||||||| | |||||| ||  ||||||||||||||||||||| ||||||||||||| || |||||    
T  14030606 ataagaaagtaccacttaagctgaaatgaaagttctatcggacaacagtcaaactagcaatgttgtatggtacggagtgttgggcggttaaaagtcaaca 14030705  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtgg-taagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  14030706 cgagagtaaagtaagtgtagcagagatgaggatgttgcgatggatgagtggttaagactagacaggataggattaggaatgacaccatt 14030794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 10100339 - 10100152
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||||| | |||||||||||||||||| |||||| ||||||||||||| |    
T  10100339 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagtagtcagaccgacgatgttgtatggtacggagtgttgggaggttaagagccaaga 10100240  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||  ||| |||||  ||||||||||||    
T  10100239 cgagagtcaagtaagtgtagcggagatgaggatgttgcgttagatgagtggtaagactagacaatatatgattagaaatgacaccatt 10100152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 20428118 - 20427931
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||    |||||||||| |||| ||| |||||| |||||||||||||||    
T  20428118 ataagaaagtaccacttaagctgaaaggaaagttctattggacagcagtcaaactaaaaatgttgtatagtacagagtgttgggtggttaagagccaaca 20428019  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  20428018 cgagagtcaaataagtgtagcggagatgaggatgttgcgctggatgagtggtaggacaagacaggataggattaggaatgacaccatt 20427931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 472 - 638
Target Start/End: Original strand, 28085197 - 28085363
Alignment:
Q  472 tgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagc 571  Q
    ||||||||||||||||||||| ||||||||||||||   || |||||||||||||| ||||||||| |||||| ||||| |||| | |||||||||||||    
T  28085197 tgaaaggaaagttctatcggacagcagtcagaccggtgttgctgtatggtacggagtgttgggcggctaagagtcaacatgagaatcaagtaagtgtagc 28085296  T
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  28085297 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccatt 28085363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 451 - 637
Target Start/End: Original strand, 2689456 - 2689642
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||| || ||||||| |||||||||||||| |||||| ||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||     
T  2689456 ataagaaagcactacttaagttgaaaggaaagttcaatcggacagcagtcagaccgtcgatgttgtatggtacggagtgttgggcggttaacagccaacg 2689555  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccat 637  Q
    ||||| | |||||| ||||| |||||||||||||||| | ||||||||  ||||||||| | |||||||||||| ||||||||||||    
T  2689556 cgagaattaagtaaatgtagtggagatgaggatgttgtgatggatgagcagtaagactaaataggataggattaggaatgacaccat 2689642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 476 - 638
Target Start/End: Original strand, 30031081 - 30031243
Alignment:
Q  476 aggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggag 575  Q
    ||||||||||||||||| ||||||||||||    |||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||||||||||||    
T  30031081 aggaaagttctatcggacagcagtcagaccaatgatgttgtatggtacggagtgttgggcggttaagagccaacatgagaatcaagttagtgtagcggag 30031180  T
Q  576 atgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||| ||||| | |||||||||||||||||||||| |||||||||||  |||| |||||||    
T  30031181 atgaggttgttgtgttggatgagtggtaagactagacgggataggattagaaatgtcaccatt 30031243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 517 - 638
Target Start/End: Complemental strand, 35043857 - 35043736
Alignment:
Q  517 atggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacagga 616  Q
    ||||||||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||    
T  35043857 atggtacggagtgttggacggttaagagccaacatgagagtcaagtaagtgtagcggagatgaagatgttgcgctggatgattggtaagattagacatga 35043758  T
Q  617 taggattaagaatgacaccatt 638  Q
    |||||||| |||||||||||||    
T  35043757 taggattatgaatgacaccatt 35043736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 2065238 - 2065051
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||  |||||| |||||||||| |||||||||| | | || | || ||| |||||||||||||||||  ||||| ||||||||||||||||    
T  2065238 ataagaaagtacatcttaagttgaaaggaaacttctatcggacaaccgtaaaactggcgatgttgtatggtacggaatgttggacggttaagagccaaca 2065139  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | ||||| |||||||||||||||||||| | | ||||||||| |||||||||| | | ||||||||||  ||||||||||||    
T  2065138 cgagaatcaagtacgtgtagcggagatgaggatgctaccctggatgagcggtaagactacatatgataggattagtaatgacaccatt 2065051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 6056252 - 6056065
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||| || || ||||| |||||||| | |||||||||| | | ||||||||| ||||||| |||| ||||||| |||||| |||||||| ||||||    
T  6056252 ataagaaaatatcatttaagttgaaaggataattctatcggacaacggtcagaccgacaatgttatatgatacggagtgttgggtggttaagaaccaaca 6056153  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||| | | ||||||| ||||  || ||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  6056152 cgaaaatcaagtaagcgtagtagaaatgcggatgttgcgttggatgagtggtaagactagaaaggatgtgattaagaatgacaccatt 6056065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 33496029 - 33496171
Alignment:
Q  496 cagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggat 595  Q
    |||||||||| ||||||||||||||||| ||| ||||| ||||||| | |||||| |||| | ||||||||||| ||||||||| ||||||||  |||||    
T  33496029 cagtcagacctgcaatgttgtatggtacagagtgttggacggttaaaaaccaacatgagaatcaagtaagtgtaacggagatgatgatgttgcattggat 33496128  T
Q  596 gagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    || |||||||| || | |||||| |||||  ||||||||||||    
T  33496129 gaatggtaagattaaataggataagattagaaatgacaccatt 33496171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 567 - 638
Target Start/End: Complemental strand, 9594078 - 9594007
Alignment:
Q  567 gtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  9594078 gtagcggagatgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccatt 9594007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 510 - 632
Target Start/End: Complemental strand, 28027248 - 28027126
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    ||||||||||||| |||| |||||| |||||||| |||||| |||| | |||||||  |||| |||| |||||||||  | |||||||||||||||||||    
T  28027248 atgttgtatggtatggagtgttgggaggttaagaaccaacatgagaatcaagtaagcatagcagagacgaggatgttatgttggatgagtggtaagacta 28027149  T
Q  610 gacaggataggattaagaatgac 632  Q
    ||  | ||||||||| |||||||    
T  28027148 gatggcataggattaggaatgac 28027126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 571
Target Start/End: Original strand, 30679274 - 30679394
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||||| |||| |||||||||||||||||| || | ||||||||||| | |||||||||||| |  |  ||||| | |||||||  |||||    
T  30679274 ataagaaagtaccacataagttgaaaggaaagttctatcagacaacagtcagaccgacgatgttgtatggtgcataatgttggacagttaagaatcaaca 30679373  T
Q  551 cgagagtaaagtaagtgtagc 571  Q
    ||||| | |||||||||||||    
T  30679374 cgagaatcaagtaagtgtagc 30679394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 565 - 677
Target Start/End: Original strand, 32755833 - 32755945
Alignment:
Q  565 gtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccattnnnnnnnnnnnntgggggtagcacct 664  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||  |||| |||||||||||||            ||||||||||||||    
T  32755833 gtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataatattaggaatgacaccattagagagagagagtgggggtagcacct 32755932  T
Q  665 atagtagaaaagt 677  Q
    |||||||||||||    
T  32755933 atagtagaaaagt 32755945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 5080766 - 5080842
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||| |||||||||||||||||||||||| | |||||||| ||||||  ||| ||||| |||||||||||||    
T  5080766 taagtgtagtggagatgaggatgttgcgctggataactggtaagattagacataataagattaggaatgacaccatt 5080842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 613
Target Start/End: Complemental strand, 4948711 - 4948627
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
    |||||| ||| |||| |||||||  || || | |||||||||||||||| ||||||||||  |||||| ||||||||||||||||    
T  4948711 gttgggtggtaaagaaccaacacctgaatagaataagtgtagcggagattaggatgttgctttggatgtgtggtaagactagaca 4948627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 613
Target Start/End: Complemental strand, 4955682 - 4955598
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
    |||||| ||| |||| |||||||  || || | |||||||||||||||| ||||||||||  |||||| ||||||||||||||||    
T  4955682 gttgggtggtaaagaaccaacacctgaatagaataagtgtagcggagattaggatgttgctttggatgtgtggtaagactagaca 4955598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 555
Target Start/End: Complemental strand, 24631227 - 24631132
Alignment:
Q  460 taccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgaga 555  Q
    ||||||||||| ||||| ||||||| ||||||| | || ||| ||  ||||||||||||| ||| ||| |||||| | ||||||||||| ||||||    
T  24631227 taccacttaagttgaaatgaaagttatatcggacaacaatcaaacttgcaatgttgtatgctacagagggttgggtgattaagagccaaaacgaga 24631132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 508 - 631
Target Start/End: Original strand, 26291636 - 26291758
Alignment:
Q  508 caatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagac 607  Q
    |||||||||||||||||||| ||| |||| | || | |||||| |||| |||||||||||||   ||||||| ||||||| | || ||| |||||||| |    
T  26291636 caatgttgtatggtacggagtgttaggcgttgaaaa-ccaacatgagaataaagtaagtgtaattgagatgatgatgttgtgttgaatgtgtggtaagtc 26291734  T
Q  608 tagacaggataggattaagaatga 631  Q
    |||||  ||||| |||| ||||||    
T  26291735 tagacttgatagtattaggaatga 26291758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 638
Target Start/End: Original strand, 9568588 - 9568647
Alignment:
Q  579 aggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||| |||||| |||||||||||||||| ||||| ||||  ||||||| ||||    
T  9568588 aggatgttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaacatt 9568647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 624
Target Start/End: Original strand, 33083964 - 33084031
Alignment:
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||||| ||||| || ||||||||| |||| |||||| ||||||||||||||  |||||| ||||    
T  33083964 taaagtaagcgtagcagaaatgaggatgctgcgttggatgtgtggtaagactagatgggatagaatta 33084031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 624
Target Start/End: Complemental strand, 33998380 - 33998313
Alignment:
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||| |||| ||||| ||||||| ||||||||| |||||| ||||||||||||||   ||||||||||    
T  33998380 taaattaagcgtagcagagatgaagatgttgcgttggatgtgtggtaagactagatgtgataggatta 33998313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 604
Target Start/End: Original strand, 2079192 - 2079286
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaa 604  Q
    ||||||||||| ||  || | ||| |||| |||| | ||||||||| |||| |||| ||||||||||||| ||||||| | |||||| |||||||    
T  2079192 atgttgtatggaacatagtgatggacggtgaagaactaacacgagaataaaataagcgtagcggagatgatgatgttgtgttggatgtgtggtaa 2079286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 602
Target Start/End: Complemental strand, 25494246 - 25494181
Alignment:
Q  536 ggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggt 602  Q
    |||||||| |||||| |||| |||||||||||| | ||||||| |||||||||| |||||| |||||    
T  25494246 ggttaagaaccaacaagagaataaagtaagtgt-gtggagatggggatgttgcgttggatgtgtggt 25494181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 6e-73; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 31960296 - 31960109
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  31960296 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 31960197  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31960196 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 31960109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 451 - 619
Target Start/End: Complemental strand, 27450655 - 27450487
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||||||||||||||||||||| ||||||| || | ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  27450655 ataagaaagtaccacttaagctgaaaggaaaattctatcagacaacagtcagaccgacaatgttgtatggtacggagtgttgggcagttaagagccaaca 27450556  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggatag 619  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27450555 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacatgatag 27450487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 33227009 - 33227196
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  33227009 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 33227108  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33227109 tgagaatcatgtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaagaatgacaccatt 33227196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 436029 - 436216
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  436029 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 436128  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  436129 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccatt 436216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 23906783 - 23906596
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  |||||||||||||| || |||||||||||||||| |||||    
T  23906783 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacgaagtgttgggcggttaagagtcaaca 23906684  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  23906683 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccatt 23906596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 43433718 - 43433905
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||  |||||||| ||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  43433718 ataagaaagtgtcacttaagttgaaaggaaagttctatcggacagcaatcagaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 43433817  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  43433818 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccatt 43433905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 1211872 - 1211685
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||||  ||||||| |||||| ||| ||||| ||||||||||||||||    
T  1211872 ataagaaaataccacttaagttgaaaggaaagttctatcggacaacagtcagaccggtgatgttgtgtggtacagagtgttggacggttaagagccaaca 1211773  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||| ||||| |||||||||||||    
T  1211772 cgagaatcaagtaagtgtagcggatatgaggatgttgcactggatgagtggtaaaactagacatgatatgattaggaatgacaccatt 1211685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 48174575 - 48174388
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||||| |||||||||| |||||    
T  48174575 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttggacggttaagagtcaaca 48174476  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     || | | |||||||| ||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  48174475 tgaaaatcaagtaagtatagcaaagatgaggatgttgcgttggatgagtggtaagactagacatgatatgattaggaatgacaccatt 48174388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 50286771 - 50286958
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||| ||||| ||||||||||||||||||||| | | |||||| || |  ||||||||| ||||||| |||||||||||||||| |||||    
T  50286771 ataagaaagtaccatttaagttgaaaggaaagttctatcggacaaccgtcagatcgacgttgttgtatgatacggagtgttgggcggttaagagtcaaca 50286870  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  50286871 tgagaatcaagtaagtgtagcagagatgaggaagttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 50286958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 56375090 - 56375277
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |||||||||||| ||  | ||||||||||||||| |||||||||||||||| |||||    
T  56375090 ataagaaagtaccacttaatttgaaaggaaagatctatcggacagcagtcagaccagcgttattgtatggtacggagtgttgggcggttaagagtcaaca 56375189  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  56375190 tgagaatcaaacaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccatt 56375277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 1777497 - 1777310
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |  ||||||||| ||||||| ||||   ||||||||| |||||    
T  1777497 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccgacgttgttgtatgatacggagtgttgaaaggttaagagtcaaca 1777398  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     || | | |||||||| ||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  1777397 tgaaaatcaagtaagtatagcaaagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 1777310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 46583306 - 46583119
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||| |||||||  ||||||||||||||||| ||| |||||||||| ||||  ||||||||||||||||| |||||||||||||||| |||||    
T  46583306 ataagaaagtatcacttaatttgaaaggaaagttctattggacagcagtcagatcggcgctgttgtatggtacggagtgttgggcggttaagagtcaaca 46583207  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||  | ||  |||||||||||||||||| ||||||||| |||||||||||||    
T  46583206 tgagaatcaagtaagtgtagcagagatgaggatgttgcattagagaagtggtaagactagacagcataggattaggaatgacaccatt 46583119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 53707594 - 53707781
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||| || |||||||  || |||||||||  ||| |||||||||||||||| |||||    
T  53707594 ataagaaagtaccacttaagttgaaaggaaagttctatcggccagcattccgaccggcgttgatgtatggtagagagtgttgggcggttaagagtcaaca 53707693  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||| || |||||||||||||    
T  53707694 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtagtaagactagacatgataggactaggaatgacaccatt 53707781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 456 - 638
Target Start/End: Complemental strand, 52569992 - 52569810
Alignment:
Q  456 aaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgaga 555  Q
    ||||||||||||||| ||||||||||||||||| ||| | ||||||||||||   ||||||||||||||||| ||||  |||||||||| ||||| ||||    
T  52569992 aaagtaccacttaagttgaaaggaaagttctattggacaacagtcagaccggtgttgttgtatggtacggagtgttgttcggttaagagtcaacatgaga 52569893  T
Q  556 gtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     | ||||||||||||| ||||| ||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  52569892 atcaagtaagtgtagcagagatcaggatgttgtgttggatgaggggtaagactagacaggataggattaggaatgacaccatt 52569810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 458 - 638
Target Start/End: Complemental strand, 47265677 - 47265497
Alignment:
Q  458 agtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagt 557  Q
    ||||||||||||| ||||| |||||||||||| || | |||||||||| || ||||||||||||||  ||  |||| |||||||||| |||||||||| |    
T  47265677 agtaccacttaagttgaaatgaaagttctatctgacaacagtcagaccagcgatgttgtatggtacaaagtattggacggttaagagtcaacacgagaat 47265578  T
Q  558 aaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     ||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  47265577 caagtaggtgtagcaaagatgaggatgttgcgctggatgagtggtaagactagacatgataagattatgaatgacaccatt 47265497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 501 - 638
Target Start/End: Complemental strand, 45205280 - 45205143
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    |||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||| | ||||||| ||||||||||||||||||||| | ||||||||||    
T  45205280 agaccggcgatgttgtatggtacggagtgttgggcagttaagaaccaacacgagaatcaagtaagcgtagcggagatgaggatgttgtgttggatgagtg 45205181  T
Q  601 gtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  45205180 gtaagactagacgggataggattaggaatgacaccatt 45205143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 451 - 607
Target Start/End: Original strand, 39708258 - 39708414
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||  | ||||| || || |||||||||||||||||||| |||||||||||||||| |||||    
T  39708258 ataagaaagtaccacttaagttgaaaggaaagttctatcgggcaacagtccgatcgacaatgttgtatggtacggagtgttgggcggttaagaggcaaca 39708357  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagac 607  Q
    ||||| | |||||||||||| | |||||||||||||||| ||||||||  |||||||    
T  39708358 cgagaatcaagtaagtgtagtgcagatgaggatgttgcgttggatgagcagtaagac 39708414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 498 - 638
Target Start/End: Original strand, 31458875 - 31459015
Alignment:
Q  498 gtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatga 597  Q
    ||||||||||| ||||| |||||||||||| ||||||| ||||||| ||||||||| | |||||||||||||||  |||||||||||||||| ||| |||    
T  31458875 gtcagaccggcgatgttttatggtacggagtgttgggcagttaagaaccaacacgaaaataaagtaagtgtagcacagatgaggatgttgcgttggttga 31458974  T
Q  598 gtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||||| |||||||||| |||||| ||||||    
T  31458975 gtggtaagactagacatgataggattaggaatgataccatt 31459015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 519 - 638
Target Start/End: Original strand, 12494618 - 12494737
Alignment:
Q  519 ggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggata 618  Q
    ||||||||| |||||||||||||||| ||||| |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  12494618 ggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgata 12494717  T
Q  619 ggattaagaatgacaccatt 638  Q
    |||||| |||||||||||||    
T  12494718 ggattaggaatgacaccatt 12494737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 48623009 - 48622836
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  | |||||||||              ||||| ||| |||||    
T  48623009 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttattgtatggt--------------ggttaggagtcaaca 48622924  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  48622923 tgagaatcaagtaagtgtagcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgacaccatt 48622836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 41009832 - 41009645
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||| ||||||||||| ||  |  |||||||||| ||| | || ||||||| || ||||||||| |||||||| |||||||| |||||||||||||    
T  41009832 ataagaaaataccacttaagttgggaaaaaagttctattggacaacaatcagaccagcgatgttgtatagtacggagtgttgggcgattaagagccaaca 41009733  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||||||||||| |||||||||||||| |||||||  |||||||||||||| | ||||||||  ||||||| ||||    
T  41009732 tgagaatcaagtaagtgtagcggaaatgaggatgttgcgttggatgatcggtaagactagacatggtaggattagaaatgacatcatt 41009645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 520 - 638
Target Start/End: Complemental strand, 33191261 - 33191143
Alignment:
Q  520 gtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggatag 619  Q
    |||||||| |||||||| ||||||| ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  33191261 gtacggagtgttgggcgattaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagattagataggatag 33191162  T
Q  620 gattaagaatgacaccatt 638  Q
    ||||| |||||||||||||    
T  33191161 gattaggaatgacaccatt 33191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 479 - 638
Target Start/End: Original strand, 4440684 - 4440842
Alignment:
Q  479 aaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatg 578  Q
    |||||||||||||| ||||||||||||  |  ||||||||| ||||| | ||||| |||||||||| ||||| |||| | ||||||||||||| |||||     
T  4440684 aaagttctatcggacagcagtcagaccaacgttgttgtatgatacggggtgttgg-cggttaagagtcaacatgagaatcaagtaagtgtagcagagatt 4440782  T
Q  579 aggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||| ||||| |||||||    
T  4440783 aggatgttgcgttcgatgagtggtaagactagacatgataggattaggaatggcaccatt 4440842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 16002728 - 16002914
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| | |||| |||||| |||| || | |||| ||||| || ||||||||||  ||| || |||||| ||||||||| |||||    
T  16002728 ataagaaagtaccacttaagttcaaagaaaagttttatcagacatcagttagaccagcgatgttgtatga-acgaagtgttgggaggttaagagtcaaca 16002826  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| | |||||||||||| | ||| || ||||||| ||||||||||||||||||||||||   ||||||||| |||||||||||||    
T  16002827 cgagaatcaagtaagtgtagtgaagacgatgatgttgtgctggatgagtggtaagactagacgaaataggattaggaatgacaccatt 16002914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 529 - 638
Target Start/End: Original strand, 27983078 - 27983187
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaa 628  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||||||| |||    
T  27983078 gttgagcggttaagagtcaacatgagagtaaagtaagtgtagcggagatgaggatattgtgctagatgagtggtaagactatacatgataggattaggaa 27983177  T
Q  629 tgacaccatt 638  Q
    ||||||||||    
T  27983178 tgacaccatt 27983187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 517 - 638
Target Start/End: Complemental strand, 39100949 - 39100828
Alignment:
Q  517 atggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacagga 616  Q
    ||||||| ||| ||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||||||||   |||||||||||||||||| | ||    
T  39100949 atggtacagagtgttggacagttaagagccaacacgagagtcatgtaagtgtagcggagatgaggatgttgcgccaaatgagtggtaagactagaaatga 39100850  T
Q  617 taggattaagaatgacaccatt 638  Q
    |||||||| |||||||||||||    
T  39100849 taggattaggaatgacaccatt 39100828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 451 - 635
Target Start/End: Original strand, 35690104 - 35690288
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||| ||  ||||| ||| |||||| ||||||| || | |||| |||||| | |||||||||| || |||  |||| | |||||||| ||||||    
T  35690104 ataagaaagtgccgtttaagttgagaggaaaattctatcagacaacagttagaccgacgatgttgtatgatatggaatgttgtgtggttaagaaccaaca 35690203  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacc 635  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||  |||||||||| ||||||||||    
T  35690204 tgagaatcaagtaagtgtagccgagatgaggatgttgcgttggatgagtagtaagactagacgagataggattaggaatgacacc 35690288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 472 - 633
Target Start/End: Complemental strand, 7092680 - 7092520
Alignment:
Q  472 tgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagc 571  Q
    |||||||||| ||||||  || |||||| ||| |||| ||||||||||||||||||  || ||| ||||||| |||||||||||   |||||||||||||    
T  7092680 tgaaaggaaaattctattagacagcagttagatcggcgatgttgtatggtacggagttttaggcagttaagaaccaacacgagaagcaagtaagtgtagc 7092581  T
Q  572 ggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgaca 633  Q
     ||||||||||||||| ||||||||||||||||| |||||  ||||| |||| |||||||||    
T  7092580 agagatgaggatgttgtgctggatgagtggtaagtctagaagggatatgatt-agaatgaca 7092520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 508 - 638
Target Start/End: Original strand, 1793317 - 1793447
Alignment:
Q  508 caatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagac 607  Q
    |||||||||||| ||| ||| ||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| | |||||||  ||||||||    
T  1793317 caatgttgtatgatacagagtgtttggcggttaagagccaacactagaatcaagtaagtgtagcggagatgaggatgttgtgttggatgaacggtaagac 1793416  T
Q  608 tagacaggataggattaagaatgacaccatt 638  Q
    |  || ||||| ||||| |||||||||||||    
T  1793417 ttaacgggataagattaggaatgacaccatt 1793447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 465 - 606
Target Start/End: Original strand, 55578845 - 55578986
Alignment:
Q  465 cttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaa 564  Q
    |||||| || ||||||| |||||||||| | ||||||||||  ||||||||||||||| | || ||||||||||||||| ||||||||||| | || |||    
T  55578845 cttaagttggaaggaaaattctatcggacaacagtcagaccaacaatgttgtatggtatgaagtgttgggcggttaagaaccaacacgagaatcaattaa 55578944  T
Q  565 gtgtagcggagatgaggatgttgcgctggatgagtggtaaga 606  Q
    |||||||  | |||||||||||| | || || ||||||||||    
T  55578945 gtgtagcatatatgaggatgttgtgttgaataagtggtaaga 55578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 618
Target Start/End: Original strand, 11389545 - 11389687
Alignment:
Q  476 aggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggag 575  Q
    |||||| || ||||||| ||  || |||||| ||||||||||||| | | || ||||||||||||||| ||||| ||||| ||||||||| ||||| |||    
T  11389545 aggaaaattttatcggacagttgtaagaccgacaatgttgtatggaaagtagtgttgggcggttaagaaccaactcgagaataaagtaagcgtagcagag 11389644  T
Q  576 atgaggatgttgcgctggatgagtggtaagactagacaggata 618  Q
    ||||||||||||   |||||| ||||||| ||||||| |||||    
T  11389645 atgaggatgttggattggatgtgtggtaaaactagacgggata 11389687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 638
Target Start/End: Complemental strand, 37773823 - 37773745
Alignment:
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||    
T  37773823 agtaagtgtaggagagatgagaatgttgcgctggatgagtggtaagactagacatgatagaattatgaatgataccatt 37773745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 580
Target Start/End: Complemental strand, 26037904 - 26037835
Alignment:
Q  511 tgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgag 580  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  26037904 tgttgtatgatacggagtgttgggcggttaagagccaacacgagaatcaagtaagtggagcggagatgag 26037835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 530 - 624
Target Start/End: Complemental strand, 40933299 - 40933205
Alignment:
Q  530 ttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||||  |||| |||||||||||||||| ||||||||||| |||||||||||||||| || ||| |||||||||| | ||| ||||| ||||    
T  40933299 ttgggcggaaaagaaccaacacgagagtaaaataagtgtagcgtagatgaggatgttgcgttgaatgtgtggtaagacaatacatgatagaatta 40933205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 636
Target Start/End: Complemental strand, 20602019 - 20601943
Alignment:
Q  560 agtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacacca 636  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||| | ||| ||||| ||| ||||||||||||    
T  20602019 agtaagtgtagcggatatgaggatgttgcgctggatgagcgctaagacaatacatgatagaattgagaatgacacca 20601943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 610
Target Start/End: Complemental strand, 934867 - 934758
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    |||||||||||||||||||| |||| | ||| ||| || |||| | |||| ||||||||| ||||||||| || ||||||| ||||||| ||| || |||    
T  934867 agaccggcaatgttgtatgggacggggtgttaggcagtaaagaactaacatgagagtaaaataagtgtagtggggatgaggttgttgcgttggctgtgtg 934768  T
Q  601 gtaagactag 610  Q
    ||| ||||||    
T  934767 gtatgactag 934758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 624
Target Start/End: Complemental strand, 34233465 - 34233342
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    ||||| || ||| ||||||| || ||||||||||| || |||| |||||||| || |||  ||||||||| |||||||| ||||||| | |||||| |||    
T  34233465 agaccagcgatgctgtatggaacagagagttgggcagtgaagaaccaacacgggaataagataagtgtagtggagatgatgatgttgtgttggatgtgtg 34233366  T
Q  601 gtaagactagacaggataggatta 624  Q
     ||||||||||   ||||||||||    
T  34233365 ataagactagatgtgataggatta 34233342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 524 - 613
Target Start/End: Complemental strand, 49739203 - 49739114
Alignment:
Q  524 ggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
    |||| |||||||| | |||| |||||| ||||||||| |||| |||| ||| ||| |||||||||| | |||| ||||||||||||||||    
T  49739203 ggagtgttgggcgataaagaaccaacaagagagtaaaataagcgtagtggaaatggggatgttgcgttagatgtgtggtaagactagaca 49739114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 638
Target Start/End: Complemental strand, 20105838 - 20105766
Alignment:
Q  566 tgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||  |||| |||||  ||||||| ||||    
T  20105838 tgtagcggagatgatgatgttgcgatggatgtgtggtaagactagacgagatatgattagaaatgacaacatt 20105766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 638
Target Start/End: Original strand, 28236080 - 28236172
Alignment:
Q  546 caacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| |||| | ||||||||||||| ||||| | |||| |||  ||||||| |||||||| |||| | |||||||||| |||||||||||||    
T  28236080 caacatgagaatcaagtaagtgtagcagagattatgatgctgcattggatgaatggtaagattagatatgataggattaggaatgacaccatt 28236172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 43070135 - 43070059
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||| |||||||  |||||| | |||||| ||||||||| |||||||||||||||||  ||||||| ||||    
T  43070135 taagtgtagcagagatgatcatgttgggttggatgtgtggtaagattagacaggataggattagaaatgacaacatt 43070059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 575 - 638
Target Start/End: Original strand, 2588905 - 2588968
Alignment:
Q  575 gatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||||||||  ||||||| ||||    
T  2588905 gatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaacatt 2588968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 611
Target Start/End: Original strand, 17900386 - 17900440
Alignment:
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    ||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||    
T  17900386 taaagtaagcgtagcagaaatgaggatgttgcgttggatgtgtggtaagactaga 17900440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 624
Target Start/End: Complemental strand, 25967638 - 25967576
Alignment:
Q  562 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||| |||| |||| ||||||||||||| |||||| |||||||||||||||| | ||||||||    
T  25967638 taagcgtagtggaggtgaggatgttgcgatggatgtgtggtaagactagacatggtaggatta 25967576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 619
Target Start/End: Original strand, 30853310 - 30853384
Alignment:
Q  545 ccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggatag 619  Q
    ||||||||||| |||| |||| | ||||||||||| ||||||| | ||||||  ||||||||||||||| |||||    
T  30853310 ccaacacgagaataaaataagcgcagcggagatgaagatgttgtgttggatgtatggtaagactagacaagatag 30853384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 622
Target Start/End: Original strand, 33709836 - 33709890
Alignment:
Q  568 tagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggat 622  Q
    |||| ||||||| ||||||||| |||||| |||||||||||||||| ||||||||    
T  33709836 tagcagagatgatgatgttgcgttggatgtgtggtaagactagacatgataggat 33709890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 611
Target Start/End: Original strand, 44860708 - 44860814
Alignment:
Q  505 cggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaa 604  Q
    |||| ||||||||||| || ||| ||||||| || |||| ||||   || | |||| |||||||||| || |||||||||||| | |||||| |||||||    
T  44860708 cggcgatgttgtatgggactgagtgttgggctgtgaagaaccaaggagaaaataaattaagtgtagcagaaatgaggatgttgtgttggatgtgtggtaa 44860807  T
Q  605 gactaga 611  Q
    |||||||    
T  44860808 gactaga 44860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 638
Target Start/End: Original strand, 51421666 - 51421719
Alignment:
Q  585 ttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||| ||||||||| ||||||||||||  |||||||||| |||||||||||||    
T  51421666 ttgcgttggatgagtagtaagactagacgagataggattatgaatgacaccatt 51421719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 638
Target Start/End: Original strand, 21106860 - 21106971
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaag--tgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaag 626  Q
    ||||||||||||||| |||||| || | |||| ||||  ||||| || ||||||||||||| | | |||| |||||||||||||||  ||||| ||||      
T  21106860 gttgggcggttaagaaccaacatgacaataaaataagagtgtagtggtgatgaggatgttgggttcgatgtgtggtaagactagacgtgatagaattaga 21106959  T
Q  627 aatgacaccatt 638  Q
    ||||||| ||||    
T  21106960 aatgacaacatt 21106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 588
Target Start/End: Original strand, 29398708 - 29398756
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgc 588  Q
    |||| |||||| |||| |||| |||||||||||||||||||||||||||    
T  29398708 aagaaccaacatgagaataaaataagtgtagcggagatgaggatgttgc 29398756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 638
Target Start/End: Original strand, 37797783 - 37797839
Alignment:
Q  582 atgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||| |||||||||| |||||||||||| |||| |||||  ||||||||||||    
T  37797783 atgttgcgttggatgagtgataagactagacatgataagattagaaatgacaccatt 37797839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 638
Target Start/End: Complemental strand, 20591670 - 20591595
Alignment:
Q  563 aagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| | || |||||||||||| ||||||||| | |||||||||||| | ||  |||| ||||||||||||||    
T  20591670 aagtgtatcagatatgaggatgttgtgctggatgaatagtaagactagacggaattagattgagaatgacaccatt 20591595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 54914671 - 54914618
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagac 504  Q
    |||||||| ||||||||||| |||||||||| |||||||||  || ||||||||    
T  54914671 ataagaaaataccacttaagttgaaaggaaaattctatcggtcaggagtcagac 54914618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 583
Target Start/End: Original strand, 28351550 - 28351602
Alignment:
Q  531 tgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggat 583  Q
    ||||||||||||| |||||| |||| |||||||||  | ||||||||||||||    
T  28351550 tgggcggttaagaaccaacatgagaataaagtaagcctggcggagatgaggat 28351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 507 - 587
Target Start/End: Complemental strand, 38904145 - 38904065
Alignment:
Q  507 gcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttg 587  Q
    |||||||||||||  |||||| ||||||| || || | ||||||| ||| |||| ||||||||||  ||||||| ||||||    
T  38904145 gcaatgttgtatgcaacggagtgttgggcagtaaaaaaccaacacaagaataaaataagtgtagcaaagatgagaatgttg 38904065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 45185403 - 45185339
Alignment:
Q  547 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    ||||||||| ||||||||||||||||| ||| || || ||| | |||||| || |||||||||||    
T  45185403 aacacgagaataaagtaagtgtagcggtgataagaatattgtgttggatgtgtagtaagactaga 45185339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 574 - 638
Target Start/End: Original strand, 45423542 - 45423606
Alignment:
Q  574 agatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||||| | ||| || ||||||||||||||| |||||| ||||  ||||||| ||||    
T  45423542 agatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaacatt 45423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 8e-66; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 12492869 - 12492682
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  12492869 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggctttgttgtatggtacggagtgttgggcggttaagagtcaaca 12492770  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  12492769 tgagaatcaagtaagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 12492682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 2075956 - 2075769
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  2075956 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 2075857  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||| ||||    
T  2075856 tgagaattaagtaagtgtagcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacatt 2075769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 1275065 - 1275252
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||| ||| |||||    
T  1275065 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttacgagtcaaca 1275164  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||  |||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||| |||||||||||||    
T  1275165 tgagaatcaagtaagcatagcagagatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccatt 1275252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 10639097 - 10639284
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||| ||||| |  ||||||||||||||||| |||||||||| ||||| |||||    
T  10639097 ataagaaagtaccacttaagttgaaaggaaagttctatcgaacagcagtccgaccgacgttgttgtatggtacggagtgttgggcggtgaagagtcaaca 10639196  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  10639197 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacagaataggattaggaatgacaccatt 10639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 16347860 - 16347673
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||| ||||||||||| ||||||||||||||||||||| | || |||||||| | || ||||||||||||||| |||| |||||||||||||||||    
T  16347860 ataagaaattaccacttaagttgaaaggaaagttctatcggacaacactcagaccgacgatattgtatggtacggagtgttgagcggttaagagccaaca 16347761  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||| ||||| ||||||    
T  16347760 cgagagttaagtaagtgtagcggagatgaggatgttgcgttggatgagtggtaagactagacaatatatgattaaaaatgaaaccatt 16347673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 1288071 - 1287884
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||| ||||| ||||||||||||||||||| | ||||||| || ||||  ||||||||||||||||| |||||||||||||||| |||||    
T  1288071 ataagaaagtaccatttaagttgaaaggaaagttctatcgaacagcagtccgatcggcgttgttgtatggtacggagtgttgggcggttaagagtcaaca 1287972  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  1287971 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacatcatt 1287884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 3301649 - 3301831
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||  ||||||||||||||||||||| || |||||||| | ||||||||||||||||| || ||||||||||||||||||||||    
T  3301649 ataagaaagtaccacttaaattgaaaggaaagttctatcggacagtagtcagactgacaatgttgtatggtacgaagtgttgggcggttaagagccaaca 3301748  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    ||     ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||    
T  3301749 cg-----aaagtaagtgtagcggagatggggatgttgcgcttgatgagtggtaagactagacatgataggattaggaatgtcaccatt 3301831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 457 - 638
Target Start/End: Original strand, 20318793 - 20318969
Alignment:
Q  457 aagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagag 556  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||| |||| ||||||||||| ||||| ||||     
T  20318793 aagtaccacttaagttgaaaggaaagttatatcggatagcagtccgaccggcgttgttgtatggtacggagtgttgcgcggttaagagtcaacatgagaa 20318892  T
Q  557 taaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    | ||||||||||||| ||||||||||||||||| ||||||||||||||||||     ||||||||||| |||||||||||||    
T  20318893 tcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact-----ggataggattaggaatgacaccatt 20318969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 28977339 - 28977152
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||| || || |  ||||||||||||||||| |||||||||||||||| |||||    
T  28977339 ataagaaagtaccacttaagttgaaaggaaagttctatcggacatcagtccgaacgacgttgttgtatggtacggagtgttgggcggttaagagtcaaca 28977240  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| |||||||| |||||| | |||||||||||||| |||||| | |||||||||| |||||||||||||    
T  28977239 tgagaatcaagtaagtgtagcagagatgagtatgttgtgttggatgagtggtaaaactagaaatgataggattaggaatgacaccatt 28977152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 451 - 617
Target Start/End: Original strand, 34272822 - 34272988
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||| | ||| |  ||||||||||||||||| |||||||||||||||| ||| |    
T  34272822 ataagaaagtaccacttaagttgaaaggaaagttcaatcggacagcagtccggccgacgttgttgtatggtacggagtgttgggcggttaagagtcaata 34272921  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggat 617  Q
     |||| | ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  34272922 tgagaatcaagtaagtgtagcagagatgaggatgttgcattggatgagtggtaagactagacaggat 34272988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 24178324 - 24178497
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |  ||||||              |||||||||||||| |||||    
T  24178324 ataagaaagtaccacttaagttgaaaggaaagttctatcgggcagcagtcagaccgacgttgttgt--------------tgggcggttaagagtcaaca 24178409  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  24178410 tgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccatt 24178497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 27694 - 27880
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| |||||||||| ||||||| || |  |||| ||| | | |||||||||||||||||| ||||||||||||||| ||||||    
T  27694 ataagaaagtaccacttaagttgaaaggaaaattctatctgacaatagtcggacagacgatgttgtatggtacggagtgttgggcggttaagaaccaaca 27793  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | |||||||  || ||||||||||||||||||  | |||||||||||| |||| ||| |||| ||||| |||||||||||||    
T  27794 tgagaattaagtaagcataacggagatgaggatgttgcattagatgagtggtaaaacta-acaagatatgattatgaatgacaccatt 27880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 466 - 633
Target Start/End: Original strand, 36200597 - 36200764
Alignment:
Q  466 ttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaag 565  Q
    ||||| |||||||||| ||||| |||| | |||||| || |||||||||||||| |||  || | | ||||||||||| |||||  |||| | |||||||    
T  36200597 ttaagttgaaaggaaaattctaccggacaacagtcaaactggcaatgttgtatgatacaaagtggtaggcggttaagaaccaacgtgagaatcaagtaag 36200696  T
Q  566 tgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgaca 633  Q
     ||| | ||||||||||||||||| |||||||| |||||||||| | |||||| ||||| ||||||||    
T  36200697 cgtatcagagatgaggatgttgcgttggatgagcggtaagactaaataggataagattaggaatgaca 36200764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 451 - 527
Target Start/End: Original strand, 3394510 - 3394589
Alignment:
Q  451 ataagaaagtaccacttaagctgaaagga---aagttctatcggatagcagtcagaccggcaatgttgtatggtacggag 527  Q
    |||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  3394510 ataagaaagtaccacttaagctgaaaggaggaaagttctatcggacagcagtcagaccggcaatgttgtatagtacggag 3394589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 638
Target Start/End: Original strand, 7678331 - 7678467
Alignment:
Q  501 agaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtg 600  Q
    ||||| || ||||||||||| |||||| |||||||| | |||| ||||||||||| || |  |||||||| |||||||||||||||||| |||||  |||    
T  7678331 agaccagcgatgttgtatggaacggagtgttgggcg-tgaagaaccaacacgagaatagaacaagtgtagtggagatgaggatgttgcgttggatctgtg 7678429  T
Q  601 gtaagactagacaggataggattaagaatgacaccatt 638  Q
    | ||||||||| ||||||||||||  ||||||| ||||    
T  7678430 gcaagactagataggataggattagaaatgacaacatt 7678467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 619
Target Start/End: Original strand, 16454600 - 16454679
Alignment:
Q  540 aagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggatag 619  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| |||  ||||||  |||||| |||||||| |||||    
T  16454600 aagaaccaacacgagagtaaagtaagtgtagcagagatgaggatgatgcattggatgtttggtaaaactagacatgatag 16454679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 635
Target Start/End: Original strand, 4496308 - 4496368
Alignment:
Q  577 tgaggatgttgcgctggatgagtggtaagactag--acaggataggattaagaatgacacc 635  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||    
T  4496308 tgaggatgttgcgttggatgagtggtaagactagacacaggataggattaggaatgacacc 4496368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 21093663 - 21093736
Alignment:
Q  538 ttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    |||||| ||||||||||| |||| ||||||||| ||| |||||||||||||| || ||| ||||||||||||||    
T  21093663 ttaagaaccaacacgagaataaaataagtgtagtggatatgaggatgttgcgttgtatgtgtggtaagactaga 21093736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 608
Target Start/End: Complemental strand, 5848462 - 5848401
Alignment:
Q  547 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagact 608  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  |||||| |||||||||||    
T  5848462 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 5848401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 638
Target Start/End: Original strand, 21952229 - 21952338
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaa 628  Q
    |||||||| |||||| |||||||||   |||| |||||||||   |||||||||||||||| || ||| |||||||||||||||  |||| |||||  ||    
T  21952229 gttgggcgcttaagaaccaacacgaacttaaattaagtgtagaaaagatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaa 21952328  T
Q  629 tgacaccatt 638  Q
    ||||| ||||    
T  21952329 tgacagcatt 21952338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 619
Target Start/End: Original strand, 32516417 - 32516526
Alignment:
Q  510 atgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagacta 609  Q
    ||||||||||| | |||  ||| ||||||||||| ||| ||  ||| |||||||   ||| ||||||||| ||||||| | |||||| ||||||||||||    
T  32516417 atgttgtatggaatggaatgtttggcggttaagaaccatcattagaataaagtacacgtaacggagatgatgatgttgtgttggatgtgtggtaagacta 32516516  T
Q  610 gacaggatag 619  Q
    ||||||||||    
T  32516517 gacaggatag 32516526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 582 - 638
Target Start/End: Complemental strand, 26885040 - 26884984
Alignment:
Q  582 atgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| |||| ||||||||    
T  26885040 atgttgcgttggatgagtggtaaaactagacgggataggattaggaataacaccatt 26884984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 586
Target Start/End: Complemental strand, 32516273 - 32516165
Alignment:
Q  478 gaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagat 577  Q
    |||| ||||| |||| ||| || |||||| | ||||||||||| |  ||| ||||||||| | ||| | ||||||||| ||||||||| |||| ||||||    
T  32516273 gaaaattctaccggacagctgttagaccgacgatgttgtatggaatagagtgttgggcggcttagaactaacacgagaataaagtaagcgtagtggagat 32516174  T
Q  578 gaggatgtt 586  Q
    |||||||||    
T  32516173 gaggatgtt 32516165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 624
Target Start/End: Original strand, 5305494 - 5305589
Alignment:
Q  529 gttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    |||||||||||| || | ||||||||| |||| ||||  ||||  ||| | |||||||||| |||||| |||||||||||||||| ||||| ||||    
T  5305494 gttgggcggttatgaacgaacacgagaataaaataagaatagcaaagacggggatgttgcgttggatgtgtggtaagactagacaagatagaatta 5305589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 633
Target Start/End: Complemental strand, 41110172 - 41110041
Alignment:
Q  502 gaccggcaatgttgtatggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtgg 601  Q
    ||||||| ||||||||||| |||||| ||||||| ||  ||| |  |||||||| |||| |||| |||||  ||||||  ||||||||||||||| || |    
T  41110172 gaccggctatgttgtatggaacggagtgttgggcagtagagaacagacacgagaataaaataagcgtagcaaagatgaaaatgttgcgctggatgtgtag 41110073  T
Q  602 taagactagacaggataggattaagaatgaca 633  Q
    | ||||||||  | |||||||||  |||||||    
T  41110072 tgagactagatggaataggattagaaatgaca 41110041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 638
Target Start/End: Complemental strand, 11002786 - 11002716
Alignment:
Q  568 tagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||| |||||||||||||||||||||||| |||||||||| |||  |||||| ||||  ||||||| ||||    
T  11002786 tagcagagatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacatt 11002716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 613
Target Start/End: Original strand, 27998345 - 27998385
Alignment:
Q  573 gagatgaggatgttgcgctggatgagtggtaagactagaca 613  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  27998345 gagatgaggatgttgcgttggatgtgtggtaagactagaca 27998385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 612
Target Start/End: Complemental strand, 43558215 - 43558135
Alignment:
Q  532 gggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagac 612  Q
    ||||||| |||| ||||||||||| |||  || | |||| |  ||||||||||||||| |||||| |||||||||||||||    
T  43558215 gggcggtgaagaaccaacacgagaataagatatgcgtagagatgatgaggatgttgcgttggatgtgtggtaagactagac 43558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 638
Target Start/End: Complemental strand, 28187028 - 28186963
Alignment:
Q  573 gagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||| |||||||  |||||| |||||||||||||||| | ||||||||  ||||||| ||||    
T  28187028 gagatgagaatgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacatt 28186963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 34194850 - 34194805
Alignment:
Q  579 aggatgttgcgctggatgagtggtaagactagacaggataggatta 624  Q
    ||||||||| | |||||| ||||||| |||||||||||||||||||    
T  34194850 aggatgttgtgttggatgtgtggtaaaactagacaggataggatta 34194805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 582 - 638
Target Start/End: Original strand, 9235000 - 9235056
Alignment:
Q  582 atgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||  |||||| ||||||||||||||| |||||||||||  ||||||| ||||    
T  9235000 atgttgcattggatgtgtggtaagactagacgggataggattataaatgacaacatt 9235056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 563 - 611
Target Start/End: Original strand, 27553752 - 27553800
Alignment:
Q  563 aagtgtagcggagatgaggatgttgcgctggatgagtggtaagactaga 611  Q
    ||||||||||||||||| ||||||| | ||||||| | |||||||||||    
T  27553752 aagtgtagcggagatgaagatgttgtgttggatgaatagtaagactaga 27553800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 574 - 638
Target Start/End: Original strand, 34039960 - 34040024
Alignment:
Q  574 agatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    |||||||||||| ||| ||||||| || ||| |||||| | ||||||||||| ||| ||||||||    
T  34039960 agatgaggatgtcgcgttggatgaatgataaaactagatatgataggattaaaaattacaccatt 34040024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 82521 - 82708
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||  |||||| ||||||||||||||||||||| | ||||||||||| | || ||||||||||||||| ||||||||||||||||||||||    
T  82521 ataagaaagtactccttaagttgaaaggaaagttctatcggacaacagtcagaccgacgatcttgtatggtacggagtgttgggcggttaagagccaaca 82620  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  82621 tgagaatcaagtaagtgcagcggagatgaggatgttgcactggatgagtagtaagactagacatgataggattaagaatgacaccatt 82708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 120; Significance: 5e-61; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 451 - 638
Target Start/End: Original strand, 31268 - 31455
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||  ||||||| ||||||||| |||||| ||||||||| |||||    
T  31268 ataagaaagtaccacttaagttgaaaggaaagttctatcgaacagcagtcagaccggcggtgttgtacggtacggagtgttgggtggttaagagtcaaca 31367  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
     |||| | ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  31368 tgagaatcaagtaagtgtagcagagattaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 31455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 530 - 633
Target Start/End: Complemental strand, 44274 - 44171
Alignment:
Q  530 ttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaat 629  Q
    ||||||||| | || | ||||||||| |||| |||| | ||||||||||||||||||||| |||||| | ||||||||||||  | |||| ||||| |||    
T  44274 ttgggcggtgaggaacaaacacgagaataaaataagcgcagcggagatgaggatgttgcgttggatgtgcggtaagactagatggtatagtattaaaaat 44175  T
Q  630 gaca 633  Q
    ||||    
T  44174 gaca 44171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 451 - 614
Target Start/End: Complemental strand, 2752 - 2589
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |  |||||||||||| |||| |||||||||||||||| |||||    
T  2752 ataagaaagtaccacttaagttgaaaggaaagttctatcggacagcagtcagactgacgttgttgtatggtatggagtgttgggcggttaagagtcaaca 2653  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacag 614  Q
     || | | ||||||||||||| |||||||||||||| |  ||||||||||||||||||| ||||    
T  2652 tgataatcaagtaagtgtagcagagatgaggatgtttcattggatgagtggtaagactatacag 2589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 451 - 637
Target Start/End: Complemental strand, 12080 - 11894
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagccaaca 550  Q
    ||||||||||||| |||||| | ||||||||||| ||||||  |||| ||||| |||   ||||| |||||||  |  ||||||||| |||||| |||||    
T  12080 ataagaaagtacctcttaagttaaaaggaaagttttatcggtcagcaatcagaacggagttgttgcatggtacaaaatgttgggcgggtaagagtcaaca 11981  T
Q  551 cgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccat 637  Q
     |||| | ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||    
T  11980 tgagaatcaagtatgtgtagcagagatgaggatgttgcgctggatgagcggtaagactagacataataggattaggaatgacaccat 11894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 519 - 638
Target Start/End: Complemental strand, 25859 - 25740
Alignment:
Q  519 ggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggata 618  Q
    ||||||||| |||||||||||||||| ||||| |||| | ||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| ||||    
T  25859 ggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagattaggatgttgtgttggatgagtggtaagactagacatgata 25760  T
Q  619 ggattaagaatgacaccatt 638  Q
    |||||| |||||||||||||    
T  25759 ggattaggaatgacaccatt 25740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 451 - 638
Target Start/End: Complemental strand, 87091 - 86902
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaa-----gttctatcggatagcagtcagaccggcaatgttgtatggtacggagagttgggcggttaagagc 545  Q
    ||||||||||| |||||||| ||||| ||||     | ||||| ||| ||||||||||||  | || |||||||||||  || ||||| |||||||||||    
T  87091 ataagaaagtatcacttaagttgaaaagaaaaaaaagctctattggacagcagtcagaccaacgattttgtatggtac--agtgttgg-cggttaagagc 86995  T
Q  546 caacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaagaatgacaccatt 638  Q
    | ||| |||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| |||||  ||||||||||||    
T  86994 cgacatgagactcaagtaagtgtagaggagatgaggatgttgcgctggatgagtggtaagaccagaaaggataagattagaaatgacaccatt 86902  T

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Target: scaffold0036 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 519 - 638
Target Start/End: Complemental strand, 4686 - 4567
Alignment:
Q  519 ggtacggagagttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggata 618  Q
    ||||||||| ||||| |||||| ||| |||||||||| | |||||| | || | || |||||||||||||| ||||||| ||||||||||||||| ||||    
T  4686 ggtacggagtgttggacggttatgagtcaacacgagaatcaagtaaatttaacagatatgaggatgttgcgttggatgaatggtaagactagacatgata 4587  T
Q  619 ggattaagaatgacaccatt 638  Q
    ||||||  ||||||||||||    
T  4586 ggattataaatgacaccatt 4567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 451 - 489
Target Start/End: Complemental strand, 67 - 29
Alignment:
Q  451 ataagaaagtaccacttaagctgaaaggaaagttctatc 489  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  67 ataagaaagtaccaattaagttgaaaggaaagttctatc 29  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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