View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5404_high_41 (Length: 251)

Name: NF5404_high_41
Description: NF5404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5404_high_41
NF5404_high_41
[»] chr2 (36 HSPs)
chr2 (1-233)||(12315707-12315938)
chr2 (7-90)||(10543689-10543772)
chr2 (7-90)||(24200686-24200769)
chr2 (8-90)||(19614983-19615065)
chr2 (6-90)||(8455376-8455460)
chr2 (6-90)||(12023979-12024062)
chr2 (6-90)||(19977774-19977858)
chr2 (27-87)||(29419970-29420030)
chr2 (6-82)||(32781348-32781424)
chr2 (27-90)||(14530309-14530372)
chr2 (6-91)||(14444719-14444803)
chr2 (6-90)||(21779321-21779403)
chr2 (6-90)||(31821403-31821485)
chr2 (6-90)||(17380297-17380380)
chr2 (8-88)||(23145760-23145840)
chr2 (8-88)||(23557550-23557630)
chr2 (7-90)||(31158502-31158585)
chr2 (6-90)||(10546153-10546238)
chr2 (6-90)||(17896250-17896335)
chr2 (6-90)||(11514427-11514511)
chr2 (6-90)||(17667993-17668077)
chr2 (6-90)||(21377133-21377217)
chr2 (6-90)||(25641493-25641576)
chr2 (9-80)||(17705496-17705567)
chr2 (6-80)||(17623565-17623639)
chr2 (8-90)||(40416933-40417015)
chr2 (7-90)||(5450276-5450360)
chr2 (14-90)||(5841019-5841095)
chr2 (14-90)||(7214525-7214601)
chr2 (38-90)||(23397757-23397809)
chr2 (7-70)||(15296468-15296531)
chr2 (27-82)||(33795284-33795339)
chr2 (6-82)||(9671180-9671254)
chr2 (14-90)||(39914373-39914450)
chr2 (6-90)||(25249798-25249881)
chr2 (26-90)||(44604845-44604908)
[»] chr5 (28 HSPs)
chr5 (7-89)||(42924895-42924977)
chr5 (8-90)||(38879572-38879654)
chr5 (8-90)||(4619168-4619250)
chr5 (8-90)||(27328743-27328825)
chr5 (6-90)||(8170044-8170126)
chr5 (6-90)||(32703415-32703497)
chr5 (6-90)||(24448881-24448965)
chr5 (15-67)||(24903765-24903817)
chr5 (6-90)||(41014310-41014393)
chr5 (7-90)||(43334193-43334277)
chr5 (27-82)||(22025542-22025597)
chr5 (6-87)||(34074622-34074703)
chr5 (7-87)||(22187279-22187359)
chr5 (38-90)||(37024646-37024698)
chr5 (6-78)||(43574609-43574681)
chr5 (27-90)||(23974771-23974834)
chr5 (8-70)||(13801831-13801893)
chr5 (6-90)||(22600445-22600529)
chr5 (38-82)||(35710312-35710356)
chr5 (6-80)||(1405188-1405262)
chr5 (1-59)||(7097815-7097872)
chr5 (6-56)||(16880707-16880757)
chr5 (32-82)||(28516520-28516570)
chr5 (27-77)||(41425952-41426002)
chr5 (50-91)||(17419904-17419945)
chr5 (6-90)||(22907925-22908008)
chr5 (2-70)||(24323761-24323829)
chr5 (2-70)||(24360385-24360453)
[»] chr4 (49 HSPs)
chr4 (127-220)||(38835014-38835107)
chr4 (8-90)||(16408665-16408747)
chr4 (29-90)||(44363215-44363276)
chr4 (6-86)||(47443952-47444032)
chr4 (1-82)||(39077851-39077930)
chr4 (6-90)||(11054208-11054290)
chr4 (6-90)||(5306724-5306807)
chr4 (6-90)||(7385536-7385620)
chr4 (8-88)||(19027841-19027921)
chr4 (6-82)||(37494850-37494926)
chr4 (7-90)||(7038044-7038126)
chr4 (6-87)||(9832373-9832452)
chr4 (6-88)||(17043454-17043536)
chr4 (8-90)||(21646955-21647037)
chr4 (6-90)||(48598885-48598967)
chr4 (6-90)||(5648250-5648333)
chr4 (6-90)||(6430686-6430769)
chr4 (6-90)||(25463113-25463197)
chr4 (6-90)||(47528590-47528672)
chr4 (1-89)||(30639372-30639459)
chr4 (6-82)||(35567169-35567245)
chr4 (6-90)||(54967012-54967095)
chr4 (8-90)||(23501784-23501860)
chr4 (8-90)||(16911553-16911635)
chr4 (6-80)||(40915830-40915903)
chr4 (36-90)||(54730240-54730294)
chr4 (6-90)||(20224975-20225057)
chr4 (7-64)||(20639720-20639777)
chr4 (2-90)||(10379999-10380086)
chr4 (6-89)||(29207958-29208039)
chr4 (36-88)||(30352681-30352733)
chr4 (36-88)||(30690273-30690325)
chr4 (14-70)||(39029129-39029185)
chr4 (7-90)||(54175054-54175137)
chr4 (7-81)||(30581527-30581602)
chr4 (27-90)||(42164230-42164292)
chr4 (37-88)||(49938681-49938732)
chr4 (28-90)||(487217-487279)
chr4 (15-69)||(21489099-21489153)
chr4 (26-88)||(23580288-23580350)
chr4 (28-70)||(36589754-36589796)
chr4 (38-88)||(41018885-41018935)
chr4 (6-88)||(47441590-47441672)
chr4 (36-82)||(54640429-54640475)
chr4 (7-88)||(25343180-25343261)
chr4 (39-88)||(30496413-30496462)
chr4 (27-88)||(43035241-43035302)
chr4 (27-90)||(14590828-14590892)
chr4 (14-57)||(20405110-20405154)
[»] chr7 (45 HSPs)
chr7 (6-90)||(19426949-19427033)
chr7 (7-88)||(7644949-7645030)
chr7 (6-87)||(27629628-27629709)
chr7 (8-90)||(42805515-42805597)
chr7 (6-90)||(11617648-11617732)
chr7 (8-90)||(47716450-47716532)
chr7 (14-90)||(35334884-35334958)
chr7 (6-90)||(42391160-42391242)
chr7 (6-82)||(2541079-2541155)
chr7 (6-90)||(23419734-23419818)
chr7 (7-82)||(35203438-35203513)
chr7 (8-90)||(43557463-43557545)
chr7 (6-90)||(32758252-32758334)
chr7 (8-80)||(46354195-46354267)
chr7 (7-90)||(5180218-5180301)
chr7 (2-77)||(15108453-15108527)
chr7 (7-90)||(22699031-22699114)
chr7 (6-90)||(8149005-8149090)
chr7 (6-90)||(10693133-10693215)
chr7 (6-90)||(11741786-11741868)
chr7 (6-82)||(21172069-21172143)
chr7 (6-90)||(14099066-14099150)
chr7 (6-90)||(14409083-14409167)
chr7 (6-90)||(19266441-19266525)
chr7 (6-90)||(42798660-42798744)
chr7 (6-82)||(48123544-48123620)
chr7 (7-82)||(12473303-12473378)
chr7 (27-82)||(16341277-16341332)
chr7 (27-90)||(29907410-29907473)
chr7 (6-80)||(7879639-7879713)
chr7 (6-91)||(38262256-38262341)
chr7 (38-82)||(31591199-31591243)
chr7 (6-90)||(33871970-33872053)
chr7 (27-87)||(42495917-42495976)
chr7 (38-90)||(47077945-47077997)
chr7 (14-69)||(1408469-1408524)
chr7 (36-90)||(7794596-7794650)
chr7 (27-80)||(18327035-18327087)
chr7 (37-82)||(18512543-18512588)
chr7 (35-80)||(21447591-21447636)
chr7 (6-82)||(6736889-6736964)
chr7 (6-90)||(13805093-13805176)
chr7 (6-82)||(28362205-28362281)
chr7 (27-87)||(32233216-32233275)
chr7 (28-80)||(42101967-42102019)
[»] chr1 (45 HSPs)
chr1 (6-90)||(18724605-18724689)
chr1 (6-90)||(14617052-14617136)
chr1 (8-90)||(10668239-10668321)
chr1 (6-90)||(46248013-46248097)
chr1 (27-88)||(35005139-35005200)
chr1 (7-88)||(35117829-35117910)
chr1 (6-90)||(4430086-4430170)
chr1 (8-80)||(30395790-30395862)
chr1 (14-90)||(46991818-46991894)
chr1 (8-90)||(18944657-18944739)
chr1 (6-87)||(32632617-32632697)
chr1 (18-90)||(22327113-22327185)
chr1 (6-90)||(23768380-23768464)
chr1 (6-82)||(25468323-25468399)
chr1 (6-90)||(41319866-41319950)
chr1 (7-90)||(9939475-9939558)
chr1 (7-90)||(27201661-27201744)
chr1 (27-90)||(50760307-50760370)
chr1 (8-90)||(20004154-20004236)
chr1 (7-88)||(50811955-50812037)
chr1 (7-88)||(2435848-2435929)
chr1 (7-88)||(17470407-17470488)
chr1 (14-90)||(34725166-34725240)
chr1 (6-90)||(38478342-38478424)
chr1 (6-90)||(47214525-47214607)
chr1 (6-90)||(22930129-22930211)
chr1 (27-90)||(6925114-6925177)
chr1 (7-89)||(19701585-19701667)
chr1 (27-90)||(25290177-25290242)
chr1 (6-82)||(12126897-12126971)
chr1 (6-90)||(20036234-20036319)
chr1 (6-87)||(23371141-23371221)
chr1 (7-80)||(27136713-27136786)
chr1 (6-90)||(35253247-35253329)
chr1 (38-90)||(45812627-45812679)
chr1 (6-88)||(6983871-6983951)
chr1 (27-90)||(8197057-8197120)
chr1 (7-90)||(33222998-33223080)
chr1 (7-82)||(45264461-45264536)
chr1 (14-64)||(20169157-20169207)
chr1 (7-81)||(39215020-39215094)
chr1 (17-70)||(30682848-30682900)
chr1 (36-88)||(2435983-2436035)
chr1 (6-90)||(11596527-11596610)
chr1 (27-91)||(15511232-15511296)
[»] chr3 (49 HSPs)
chr3 (8-90)||(8247751-8247833)
chr3 (1-91)||(12914090-12914180)
chr3 (8-90)||(13730666-13730748)
chr3 (8-90)||(30928209-30928291)
chr3 (27-90)||(516422-516485)
chr3 (8-90)||(13628854-13628936)
chr3 (8-90)||(46421099-46421181)
chr3 (27-88)||(34420725-34420786)
chr3 (6-90)||(4495724-4495808)
chr3 (8-88)||(26573142-26573222)
chr3 (8-90)||(29366784-29366866)
chr3 (14-90)||(7943003-7943079)
chr3 (6-90)||(40272872-40272956)
chr3 (27-90)||(10870033-10870095)
chr3 (31-90)||(35417929-35417988)
chr3 (27-90)||(54032640-54032703)
chr3 (8-70)||(14986990-14987052)
chr3 (6-82)||(1217111-1217185)
chr3 (9-90)||(33926096-33926176)
chr3 (6-90)||(39203529-39203611)
chr3 (8-88)||(45620890-45620971)
chr3 (29-90)||(53062051-53062112)
chr3 (7-75)||(10795486-10795554)
chr3 (6-90)||(26869720-26869803)
chr3 (27-87)||(53996647-53996707)
chr3 (27-90)||(9607216-9607279)
chr3 (7-70)||(55401209-55401272)
chr3 (37-90)||(5173811-5173864)
chr3 (6-90)||(7696947-7697029)
chr3 (6-90)||(22122977-22123059)
chr3 (14-82)||(33235552-33235621)
chr3 (2-82)||(52428533-52428614)
chr3 (27-87)||(12525423-12525483)
chr3 (14-82)||(19731023-19731091)
chr3 (6-90)||(22609779-22609862)
chr3 (14-90)||(39212003-39212079)
chr3 (7-82)||(1121286-1121361)
chr3 (27-90)||(45139559-45139622)
chr3 (7-58)||(45786277-45786328)
chr3 (6-79)||(6411882-6411954)
chr3 (7-88)||(25944484-25944565)
chr3 (6-70)||(31592882-31592944)
chr3 (27-71)||(43114950-43114995)
chr3 (27-80)||(45948919-45948972)
chr3 (8-57)||(49013537-49013586)
chr3 (41-90)||(52926305-52926354)
chr3 (27-88)||(54374427-54374488)
chr3 (6-54)||(9276313-9276361)
chr3 (14-82)||(19751599-19751667)
[»] scaffold0049 (1 HSPs)
scaffold0049 (7-90)||(58968-59051)
[»] chr8 (38 HSPs)
chr8 (6-90)||(2626510-2626597)
chr8 (6-90)||(17823567-17823651)
chr8 (6-90)||(36720787-36720871)
chr8 (7-90)||(18164821-18164903)
chr8 (14-90)||(28817694-28817770)
chr8 (6-90)||(35261670-35261754)
chr8 (8-90)||(20869560-20869640)
chr8 (6-89)||(29521745-29521828)
chr8 (8-82)||(39461058-39461132)
chr8 (6-75)||(5135349-5135418)
chr8 (27-80)||(6760823-6760876)
chr8 (6-90)||(12670310-12670392)
chr8 (7-88)||(44781567-44781648)
chr8 (6-82)||(389642-389720)
chr8 (8-87)||(22598151-22598230)
chr8 (3-82)||(36918123-36918202)
chr8 (6-80)||(44530150-44530224)
chr8 (8-80)||(26954133-26954206)
chr8 (6-90)||(13160693-13160776)
chr8 (38-90)||(30454187-30454239)
chr8 (30-82)||(30962857-30962909)
chr8 (11-90)||(11748290-11748369)
chr8 (27-90)||(28407407-28407469)
chr8 (8-90)||(7136591-7136673)
chr8 (36-90)||(20284163-20284217)
chr8 (36-90)||(21070792-21070846)
chr8 (6-80)||(45071266-45071339)
chr8 (7-88)||(42083760-42083841)
chr8 (14-82)||(14018037-14018105)
chr8 (8-70)||(8484000-8484062)
chr8 (6-79)||(12625891-12625965)
chr8 (8-90)||(25250513-25250595)
chr8 (6-64)||(29877111-29877169)
chr8 (37-82)||(31457172-31457217)
chr8 (9-82)||(35105922-35105995)
chr8 (7-80)||(44742580-44742653)
chr8 (6-70)||(5689642-5689706)
chr8 (6-90)||(8897824-8897908)
[»] chr6 (25 HSPs)
chr6 (8-90)||(12221979-12222061)
chr6 (8-90)||(29355919-29356001)
chr6 (2-90)||(32728212-32728300)
chr6 (8-90)||(2166474-2166556)
chr6 (8-90)||(2178107-2178189)
chr6 (14-91)||(8409233-8409310)
chr6 (27-90)||(13905060-13905123)
chr6 (7-81)||(14553511-14553585)
chr6 (27-89)||(17432332-17432394)
chr6 (6-90)||(1346955-1347037)
chr6 (6-90)||(1354817-1354899)
chr6 (8-88)||(23240886-23240964)
chr6 (37-90)||(9161114-9161167)
chr6 (6-90)||(3815137-3815221)
chr6 (8-80)||(6024234-6024306)
chr6 (34-90)||(14975168-14975224)
chr6 (17-81)||(18277264-18277328)
chr6 (27-82)||(17448323-17448378)
chr6 (27-82)||(24097580-24097635)
chr6 (27-77)||(4136598-4136648)
chr6 (4-90)||(20400658-20400744)
chr6 (36-90)||(27855528-27855582)
chr6 (37-90)||(22967162-22967215)
chr6 (37-90)||(23821178-23821231)
chr6 (6-81)||(28007628-28007701)
[»] scaffold0187 (2 HSPs)
scaffold0187 (2-90)||(10106-10192)
scaffold0187 (2-90)||(20434-20520)
[»] scaffold0254 (1 HSPs)
scaffold0254 (8-90)||(4148-4230)
[»] scaffold0057 (2 HSPs)
scaffold0057 (6-80)||(46832-46906)
scaffold0057 (6-90)||(24832-24911)
[»] scaffold0223 (1 HSPs)
scaffold0223 (38-90)||(11122-11174)
[»] scaffold0311 (1 HSPs)
scaffold0311 (29-90)||(10801-10862)
[»] scaffold0168 (1 HSPs)
scaffold0168 (6-90)||(30570-30652)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-90)||(35077-35162)
[»] scaffold1176 (1 HSPs)
scaffold1176 (38-90)||(1677-1729)
[»] scaffold0258 (1 HSPs)
scaffold0258 (37-90)||(13114-13167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (37-82)||(43128-43173)
[»] scaffold0167 (1 HSPs)
scaffold0167 (30-90)||(23590-23650)
[»] scaffold0005 (1 HSPs)
scaffold0005 (27-90)||(226486-226550)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 12315707 - 12315938
Alignment:
Q  1 tcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacattcccttaatt 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||| || |||||||||||||||||||||| ||| ||||||||||||    
T  12315707 tcactatttggtgtattgtacacagtcttaccctgtttttta-ataagaagctgtttccatgacttgaactcgtgacctttcgatcaaattcccttaatt 12315805  T
Q  101 attgcattcatattcagataactccacaacagtttcaggctcaccttcccttaaacaatcaagtggaggaatagtcaaagtctcttgtcttccataagca 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12315806 attgcattcatattcagataactccacaacagtttcaggctgaccttcccttaaacaatcaagtggaggaatagtcaaagtctcttgtcttccataagca 12315905  T
Q  201 ttccaacaaaaagggtcatcaactagttcacct 233  Q
    ||||||||||||||||||||||||| |||||||    
T  12315906 ttccaacaaaaagggtcatcaactaattcacct 12315938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 10543772 - 10543689
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| || |||| |||||||||||| ||||||||||| |||||||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacat 10543689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 24200686 - 24200769
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||| |||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacat 24200769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 19615065 - 19614983
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||| || ||||||||||||||||| |||||| | |||||  ||||||||||| ||||||||||| |||||||    
T  19615065 ttggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtcacat 19614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 8455376 - 8455460
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||| |||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  8455376 atttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 8455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 12023979 - 12024062
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  12023979 atttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 12024062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 19977774 - 19977858
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||| ||| ||||||||| |||| ||||||| ||| |||||||| |||||||||||||||||||    
T  19977774 atttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacat 19977858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 29419970 - 29420030
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtca 29420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 32781348 - 32781424
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| || |||||||||||||||||||||||| | ||||| |  |||||||||||||||||||||    
T  32781348 atttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttc 32781424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 14530372 - 14530309
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  14530372 cttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 14530309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 14444803 - 14444719
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 91  Q
    ||||||| ||| |||||||  |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||| | ||||||||    
T  14444803 atttggtgtatcgtacacagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatt 14444719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 21779321 - 21779403
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||||||||||||  |||||||| ||||| | |||||||||||| ||||||||||| |||||||    
T  21779321 atttggtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacat 21779403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 31821403 - 31821485
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||||||| |||||||| ||||||||||| |  |||||||  | ||||||||||||||||||||| |||||||    
T  31821403 atttggtgtattgtacacaaccttaccctattttttacacacg--gctgtttctacgacttgaactcgtgacctttcagtcacat 31821485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 17380297 - 17380380
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| ||||| |||||| |||||||||||| | |||||||| | ||||| || ||||||||| |||||||||||||||||||    
T  17380297 atttggtgtattgcacacaaccttaccctgtttat-acacaagaggttgtttccaagacttgaacccgtgacctttcggtcacat 17380380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 23145760 - 23145840
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||| |||||||| ||  ||||| |||||||||||||||||  ||||||||| ||||||||| ||||||||||| |||||    
T  23145760 ttggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23145840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 23557550 - 23557630
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||| |||||||| ||  ||||| |||||||||||||||||  ||||||||| ||||||||| ||||||||||| |||||    
T  23557550 ttggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23557630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 31158502 - 31158585
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||  ||||||||||||||||||||| ||||| |||||||| | ||||| ||| | ||||||||| |||||||    
T  31158502 tttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttgaagactttaacccttgacctttcagtcacat 31158585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 10546238 - 10546153
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||||| | |||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  10546238 atttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 17896335 - 17896250
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||||| ||  |||||||| |||||| |||||||| | |||||  ||||||||||  |||||||||||||||||||    
T  17896335 atttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacat 17896250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 11514511 - 11514427
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||  |||||||||||||||| ||||||| ||||| |||||| ||||||||| | |||||||    
T  11514511 atttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacat 11514427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 17668077 - 17667993
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||| ||||||||||||| | | ||| |||||||||||| ||||||||| | |||||||    
T  17668077 atttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacat 17667993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 21377133 - 21377217
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||  ||||||| ||  ||||||||||||||||||||||| | |||||  | ||||||||||||| ||||||| |||||||    
T  21377133 atttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacat 21377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 25641576 - 25641493
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| |||  ||||||||||||  |||||| | ||||||| |||||||||||| ||||||||||| |||||||    
T  25641576 atttggtgtattgtacgcaactttaccctgttttc-acacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacat 25641493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 17705567 - 17705496
Alignment:
Q  9 tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    |||| |||||||||||  ||||| ||||| ||||||||||| || |||| |||||||||||| |||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 17623639 - 17623565
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||  ||||||||| ||||||||||||| | |||||  ||||||||||| |||||||||    
T  17623639 atttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgacctt 17623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 40416933 - 40417015
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||||||  ||| |||||||||||| |||||| | ||||| || ||||||||| ||||||||| | |||||||    
T  40416933 ttggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacat 40417015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 5450360 - 5450276
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||  |||||| |||||||| |||||||| | ||||| ||||| |||||| ||||||||||| |||||||    
T  5450360 tttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacat 5450276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 5841095 - 5841019
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| ||  |||||||| |||||||||||| | |||||||  ||||||||||| ||||||||| | |||||||    
T  5841095 tattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacat 5841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 7214601 - 7214525
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| ||  |||||||||| ||||||||||||  |||||| || ||||||||| | ||||||||| |||||||    
T  7214601 tattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacat 7214525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 23397809 - 23397757
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||| ||||||| |||||||||||| | ||||||||| |||||||    
T  23397809 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacat 23397757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 15296468 - 15296531
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||||||||||||| ||  |||||||||| |||||||||| | ||||||| | ||||||||||    
T  15296468 tttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaac 15296531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 33795339 - 33795284
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||||||| ||||| | ||||| | |||||||||| |||||||||||    
T  33795339 cttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttc 33795284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 9671254 - 9671180
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| ||||| |||||| |||||| ||||    
T  9671254 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttc 9671180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 39914373 - 39914450
Alignment:
Q  14 tattgtacacaatcttaccctgtttt-ttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||  ||||||||||||| |||||||||| | ||||| ||| |||||| | ||||||||| | |||||||    
T  39914373 tattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacat 39914450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 25249798 - 25249881
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||| ||| |||||||||  |||||| || ||||||||| ||||||||| | |||||||    
T  25249798 atttggtgtattgtacgcagccttaccctg-tttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacat 25249881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 44604908 - 44604845
Alignment:
Q  26 tcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||  |||||||| | |||||||    
T  44604908 tcttaccctgttttt-acacaagaggttgtttccaggacttgaacctgtgaccttccagtcacat 44604845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42924895 - 42924977
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 89  Q
    |||||| |||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 38879654 - 38879572
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  |||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  38879654 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 38879572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 4619168 - 4619250
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||| | |||||||    
T  4619168 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacat 4619250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 27328825 - 27328743
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  |||||||||||||||||||||||  |||||| ||||||||||||  |||||||||| |||||||    
T  27328825 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacat 27328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 8170044 - 8170126
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||| | ||||||| |||||||||||| |||||||||||||||||||    
T  8170044 atttggtgtattgtacgcagccttaccctgtttt--acacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacat 8170126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 32703497 - 32703415
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  32703497 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 32703415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 24448965 - 24448881
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||| |||||||||||| | ||||||| |||||||||||| ||||||||| | |||||||    
T  24448965 atttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacat 24448881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 24903765 - 24903817
Alignment:
Q  15 attgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttg 67  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  24903765 attgtacacaatcttaccctattttttacacaaaaggctgttttcaggacttg 24903817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 41014393 - 41014310
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  41014393 atttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 41014310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 43334277 - 43334193
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||  ||||||||||||||| ||||| || ||||||| |||||||||||| ||||||||||| |||||||    
T  43334277 tttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacat 43334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 22025597 - 22025542
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||    
T  22025597 cttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 34074622 - 34074703
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||| ||||| || ||| |||||  |||||||||||||||| |||||||  |||||||||||| |||||||||| ||||    
T  34074622 atttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtca 34074703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 22187359 - 22187279
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    |||||| |||||||| || ||||| | |||||||||||||||| ||||||| |||||||| |||  |||||||||| ||||    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtca 22187279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 37024646 - 37024698
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 37024698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 43574681 - 43574609
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacc 78  Q
    |||||||||||||||| ||  ||||||||||||| |||||||||   ||||| |||||||||||| |||||||    
T  43574681 atttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 23974834 - 23974771
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| |||||||||||||| | ||||| |||||||||||| ||||||||| | |||||||    
T  23974834 cttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacat 23974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 13801831 - 13801893
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| |||| || ||||||||||||    
T  13801831 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaac 13801893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 22600529 - 22600445
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||||||  |||||||||| |||||||||| |   ||||| |||||||||||| ||| ||||| | |||||||    
T  22600529 atttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacat 22600445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 35710356 - 35710312
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 35710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 1405262 - 1405188
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||| ||||| || ||||||| | |||| | ||||| |||||||||||| |||||||||    
T  1405262 atttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7097815 - 7097872
Alignment:
Q  1 tcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttc 59  Q
    |||| ||||||| |||||||| ||| ||||||||| ||||||||||||| |||||||||    
T  7097815 tcaccatttggtgtattgtacgcaaccttaccctg-tttttacacaagaggctgttttc 7097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 16880707 - 16880757
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgtt 56  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| ||||||    
T  16880707 atttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 28516520 - 28516570
Alignment:
Q  32 cctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||||||||||| | ||||| || ||||||||| |||||||||||    
T  28516520 cctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttc 28516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 41426002 - 41425952
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgac 77  Q
    ||||||||||||||||||||| ||| ||||| ||| |||||||| ||||||    
T  41426002 cttaccctgttttttacacaataagttgtttccagaacttgaacccgtgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 17419945 - 17419904
Alignment:
Q  50 agctgttttcaggacttgaactcgtgacctttcggtcacatt 91  Q
    |||||||| |||||||||||||||| ||||||| ||||||||    
T  17419945 agctgtttccaggacttgaactcgtaacctttcagtcacatt 17419904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 22907925 - 22908008
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||  ||| ||||| ||||||| ||||||||| |||||||   |||||||||| | ||||||||| |||||||    
T  22907925 atttggtgtattgtatgcaaccttactctgtttt-tacacaagaggctgtttcttggacttgaacccttgacctttcagtcacat 22908008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 24323761 - 24323829
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||||||||  |||| ||| ||| |||||||||| |||||||||||| | ||||| ||| ||||||||    
T  24323761 cactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 24360385 - 24360453
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||||||||  |||| ||| ||| |||||||||| |||||||||||| | ||||| ||| ||||||||    
T  24360385 cactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 38835107 - 38835014
Alignment:
Q  127 caacagtttcaggctcaccttcccttaaacaatcaagtggaggaatagtcaaagtctcttgtcttccataagcattccaacaaaaagggtcatc 220  Q
    ||||||| ||||| ||||||||||||||||||| || |||||| |||||||||||||||||    |||||||||||||||||||||||||||||    
T  38835107 caacagtctcagggtcaccttcccttaaacaattaattggaggtatagtcaaagtctcttgagccccataagcattccaacaaaaagggtcatc 38835014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 16408665 - 16408747
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| || |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  16408665 ttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 16408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 44363215 - 44363276
Alignment:
Q  29 taccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||    
T  44363215 taccctgttttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacat 44363276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 47444032 - 47443952
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtc 86  Q
    ||||||| |||||||| ||  ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||    
T  47444032 atttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtc 47443952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39077851 - 39077930
Alignment:
Q  1 tcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||| |||||||||||||||| ||| |||||||||||||  |||||||| ||||||| |||||||||||| |||||||||||    
T  39077851 tcaccatttggtatattgtacgcaaccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttc 39077930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 11054208 - 11054290
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || ||||||||||||||  ||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  11054208 atttggtgtattgtacgcagtcttaccctgtttt--acacaagagactgttttcaggacttgaacccgtgacctttcagtcacat 11054290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 5306724 - 5306807
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| ||||||||| |||| |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  5306724 atttggtgtattgtacgcaaccttaccctgatttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 5306807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 7385536 - 7385620
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| ||||| |||||| |||||||| ||||||||||| || ||||||| |||| ||||||| ||||||||||| |||||||    
T  7385536 atttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacat 7385620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 19027921 - 19027841
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||| |||||    
T  19027921 ttggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcac 19027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 37494926 - 37494850
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||||||||  ||| ||||||||||||||||||||||| | ||||| ||||||||||||  ||||||||||    
T  37494926 atttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttc 37494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 7038126 - 7038044
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| ||||||||  | ||||||||| ||||||||||||||||||| |||||||||||||||  |||||||||| |||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctg-tttcaggacttgaacctgtgacctttcagtcacat 7038044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 9832373 - 9832452
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||    
T  9832373 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgacctttcagtca 9832452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 17043454 - 17043536
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||| |||||||| ||  |||||||||| |||||||||||| ||||||| ||||||||||||  |||||||||| |||||    
T  17043454 atttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcac 17043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 21647037 - 21646955
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||| ||  |||||||| |||||||||||||| ||||||| ||||||||||||  |||||||| | |||||||    
T  21647037 ttggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacat 21646955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 48598885 - 48598967
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  48598885 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 48598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 5648333 - 5648250
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  5648333 atttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttacagtcacat 5648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 6430686 - 6430769
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||| ||||||||| ||||||| || ||||||||| ||||||||||| |||||||    
T  6430686 atttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacat 6430769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 25463197 - 25463113
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| | |||||| ||| ||| ||| ||||||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  25463197 atttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 25463113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 47528590 - 47528672
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  47528590 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 47528672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 30639459 - 30639372
Alignment:
Q  1 tcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 89  Q
    |||| ||||||| |||||||| ||  |||||||||||||| ||||||||  |||||| ||||||||||||  |||||||||| ||||||    
T  30639459 tcaccatttggtgtattgtacgcagccttaccctgttttt-acacaagagtctgtttccaggacttgaaccagtgacctttcagtcaca 30639372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 35567245 - 35567169
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| | |||||||||  ||||||||||||||||||||||  ||||||| || ||||||||| | |||||||||    
T  35567245 atttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacctttc 35567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 54967095 - 54967012
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||||  ||| ||||||||||||||||||||||| | | ||| ||| ||||||||  |||||||||| |||||||    
T  54967095 atttggtatattgtag-caaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacat 54967012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 23501860 - 23501784
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||| ||||||||||||||||||||||| |||||      ||||||||| ||||||||||| |||||||    
T  23501860 ttggtgtattgtacgcaaccttaccctgttttttacacaagaggctgt------gacttgaacccgtgacctttcagtcacat 23501784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 16911635 - 16911553
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||| ||| ||||||||| |||||||  ||||||||||| ||||||||||  |||||||    
T  16911635 ttggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacat 16911553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 40915903 - 40915830
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||  |||||| ||||||| |||||||| ||||||| |||||||||||| |||||||||    
T  40915903 atttggtgtattgtacgcagccttaccttgttttt-acacaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 54730294 - 54730240
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||| |||||||  ||||||||||| |||||||||| ||||||||    
T  54730294 ttttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacat 54730240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 20225057 - 20224975
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| | ||||| |||||||||||| | ||||||||| |||||||    
T  20225057 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggttgtttccaggacttgaacccatgacctttcagtcacat 20224975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 20639720 - 20639777
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 64  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| ||||||| ||||||    
T  20639720 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 10379999 - 10380086
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||| |||||||| |||| ||| ||| |||| ||||||||| | |||||  |||||||||||  |||||||||| |||||||    
T  10379999 cactatttggtgtattgtacgcaattttatcctatttt-tacacaagaggttgtttgtaggacttgaacaagtgacctttcagtcacat 10380086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 29207958 - 29208039
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 89  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||  ||| |||||||||||| ||||||||||| ||||||    
T  29207958 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30352681 - 30352733
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||||||||||| ||||||| |||||||  ||| |||||||||||||||||    
T  30352681 ttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcac 30352733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30690273 - 30690325
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||||||| |||||    
T  30690273 ttttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcac 30690325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 39029129 - 39029185
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    |||||||||||  ||||||||||||||||||||||| ||||||| || | |||||||    
T  39029129 tattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaac 39029185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 54175137 - 54175054
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgtttt-caggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||  |||||||||||||| |||||||| |||||||| |||||||||||  |||||| |||| |||||||    
T  54175137 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgttttccaggacttgaatccgtgacatttcagtcacat 54175054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 30581527 - 30581602
Alignment:
Q  7 tttggtatattgtacacaatcttaccctg-ttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 81  Q
    |||||| |||||||||||  ||||||||| |||||||||||||| | ||||| || ||||||||| | ||||||||    
T  30581527 tttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgaccttt 30581602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 42164230 - 42164292
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||| ||||||||| | ||||| || ||||||||| ||||||||||| |||||||    
T  42164230 cttaccctgtttt-tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacat 42164292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 49938681 - 49938732
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||| |||||    
T  49938681 tttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcac 49938732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 487217 - 487279
Alignment:
Q  28 ttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||| ||||||||| | ||||| || ||||||||| ||||||||||| |||||||    
T  487217 ttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacat 487279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 21489153 - 21489099
Alignment:
Q  15 attgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 69  Q
    ||||||| || |||||| ||||||||||| ||||| ||||||| |||||||||||    
T  21489153 attgtacgcagtcttactctgttttttacgcaagaggctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 23580288 - 23580350
Alignment:
Q  26 tcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||| ||||||||||||||||||| ||| |||  || |||||||| ||||||||||| |||||    
T  23580288 tcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcac 23580350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 36589796 - 36589754
Alignment:
Q  28 ttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||    
T  36589796 ttaccatgttttttacacaagaggctgtttccaggacttgaac 36589754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 41018885 - 41018935
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||||||||| | ||||| |||||||||||| ||||||||||| |||||    
T  41018885 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcac 41018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 47441590 - 47441672
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||| |||||||||||  ||||||||| |||||||| ||||  ||||||   ||||||||||  |||||||||| |||||    
T  47441590 atttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcac 47441672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 54640429 - 54640475
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||||||| ||||||| || ||||||||| |||||||||||    
T  54640429 ttttttacacaagaggctgtttccaagacttgaacccgtgacctttc 54640475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 25343261 - 25343180
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||| ||  |||||||||||||||||||||||  || ||| ||| ||||||||  ||||||| || |||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcac 25343180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 30496413 - 30496462
Alignment:
Q  39 tttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||| |||||    
T  30496413 tttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcac 30496462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 43035302 - 43035241
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| ||||| |||||||||| | ||||| | |||||||||| ||||||||||| |||||    
T  43035302 cttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcac 43035241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 14590892 - 14590828
Alignment:
Q  27 cttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||| | |||||| |||||||  ||||||||||  ||||||||||| |||||||    
T  14590892 cttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacat 14590828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 20405154 - 20405110
Alignment:
Q  14 tattgtacacaatcttaccctgtt-ttttacacaagaagctgttt 57  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||    
T  20405154 tattgtacgcaatcttaccctgtttttttacacaagaggctgttt 20405110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 19426949 - 19427033
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || ||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  19426949 atttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacat 19427033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 7645030 - 7644949
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||| | ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcac 7644949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 27629709 - 27629628
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||| |||| ||| ||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  27629709 atttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtca 27629628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 42805597 - 42805515
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  42805597 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 42805515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 11617648 - 11617732
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || |||||||||||||||||||||||| | ||||| ||||||||||||  |||||||||| |||||||    
T  11617648 atttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacat 11617732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 47716532 - 47716450
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  47716532 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 47716450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 35334884 - 35334958
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||| |||||||||||||||||||| |||  |||||| |||||||||||||||||||||| | |||||||    
T  35334884 tattgtacacagtcttaccctgttttttacacgaga--ctgtttccaggacttgaactcgtgaccttccagtcacat 35334958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 42391160 - 42391242
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  42391160 atttggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccaggacttgaacccgtgacctttcagtcacat 42391242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 2541079 - 2541155
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| ||| |||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  2541079 atttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 23419734 - 23419818
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || |||||||||||||||||||||||| ||||||| ||| ||||||||  |||||||||  |||||||    
T  23419734 atttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacat 23419818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 35203513 - 35203438
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||||| || ||||| ||||||||||||||||||   ||||| |||||||||||| |||||||||||    
T  35203513 tttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttc 35203438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 43557545 - 43557463
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||| ||||||||||||||||| ||||||| |||||||||||| | ||||||||| |||||||    
T  43557545 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacat 43557463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 32758334 - 32758252
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||||||  |||||||||||||  |||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  32758334 atttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 32758252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 46354267 - 46354195
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| | ||||| |||||||||||| |||||||||    
T  46354267 ttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 5180218 - 5180301
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| | ||||||||| ||||||||||||||| |||||||| ||||||| ||| | |||||| | ||||||||| |||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacat 5180301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15108453 - 15108527
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgac 77  Q
    ||||||||| | |||||||||||  |||||| |||||| |||||||||| |||||| |||||||||||||||||||    
T  15108453 cactatttgatgtattgtacacagccttaccttgtttt-tacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 22699031 - 22699114
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| || ||||||||||||||||||||||||  || ||| |||||||||||| | | ||||||| |||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtcacat 22699114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 8149005 - 8149090
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttta-cacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||||||| ||||||| ||||||| |  |||||||||||||||||||||||| || | |||||||    
T  8149005 atttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcagtcacat 8149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 10693133 - 10693215
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||| ||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10693133 atttggtgtattgtacgcagccttaccctctttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10693215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 11741868 - 11741786
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||| ||||  |||| |||||||||||||||||||||||| | ||||||||| |||||||    
T  11741868 atttggtgtattgtacgcagccttaccctatttt--acactagaagctgttttcaggacttgaacccatgacctttcagtcacat 11741786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 21172069 - 21172143
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||| |||||||||||    
T  21172069 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttc 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 14099066 - 14099150
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || ||||| |||||||||||||||| | ||| ||| |||||||| ||| | ||||||||| |||||||    
T  14099066 atttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacat 14099150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 14409083 - 14409167
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || ||||| |||||||||||||||| | ||| ||| |||||||| ||| | ||||||||| |||||||    
T  14409083 atttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacat 14409167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 19266525 - 19266441
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||||||| ||||  ||| |||||||||||||||| |  |||||||| |||||||    
T  19266525 atttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgacctttcagtcacat 19266441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 42798744 - 42798660
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||| ||||||||||||||||  |||||| || ||||||||| ||||||||| | |||||||    
T  42798744 atttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacat 42798660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 48123544 - 48123620
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||  || | |||||||||| ||||||||||| ||||||| |||||||||||| | |||||||||    
T  48123544 atttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttc 48123620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 12473378 - 12473303
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||| |||||||| ||  |||||||||||||| |||||||| | ||||| |||||||||||| | |||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttc 12473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 16341332 - 16341277
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||||||||||||| |||||||  || |||||||| |||||||||||    
T  16341332 cttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttc 16341277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 29907473 - 29907410
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| || |||||||||||||| |||||||  ||||||||||| ||||||||||| |||||||    
T  29907473 cttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacat 29907410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 7879713 - 7879639
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||  |||||| ||||||||||||||||   ||||| |||||||||||| |||||||||    
T  7879713 atttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 38262256 - 38262341
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 91  Q
    ||||||| |||||||  |||  ||||| | ||||||||||||||  |||||| |||||||||||| ||||||||| | ||||||||    
T  38262256 atttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttgaacccgtgaccttccagtcacatt 38262341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 31591199 - 31591243
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  31591199 ttttacacaagaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 33871970 - 33872053
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||| |||||||| ||||||||| | ||||| |||||||||||| || |||||||| |||||||    
T  33871970 atttggtgtattgtacgcagccttatcctgtttt-tacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacat 33872053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 42495917 - 42495976
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| ||||||||||| ||||    
T  42495917 cttaccctgttttt-atacaagaggctgtttccaggacttgaacccgtgacctttcagtca 42495976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 47077945 - 47077997
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||  |||||| |||||||||||| ||||||||||| |||||||    
T  47077945 ttttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacat 47077997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 1408524 - 1408469
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaa 69  Q
    |||||||||||  |||||| |||||||||||||||| ||| ||| |||||||||||    
T  1408524 tattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 7794596 - 7794650
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||| | |||||||    
T  7794596 ttttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacat 7794650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 18327087 - 18327035
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    |||||||||||||| |||||||| ||||||| | |||||||||| |||||||||    
T  18327087 cttaccctgttttt-acacaagaggctgtttccgggacttgaacccgtgacctt 18327035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 18512543 - 18512588
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||    
T  18512543 tttttacacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 21447636 - 21447591
Alignment:
Q  35 gttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||||    
T  21447636 gttttttacacaagaggctgttttcaagacttgaatccgtgacctt 21447591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 6736964 - 6736889
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||  || ||||||| ||||||| | |||||| | |||||| ||||||||||| |||||||||||    
T  6736964 atttggtgtattgtatgcagtcttaccttgttttt-atacaagaggttgttttgaggacttgaacccgtgacctttc 6736889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 13805176 - 13805093
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||||||  |||||||  | |||||||| ||| ||| ||| |||||||||||| ||| ||||||| |||||||    
T  13805176 atttggtgtattgtacacagccttacccc-tgttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacat 13805093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 28362205 - 28362281
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||  ||||||  ||||||||||||||| || ||||  |||||||||||  ||||||||||    
T  28362205 atttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttc 28362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 32233216 - 32233275
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||| | ||||||||| ||||    
T  32233216 cttaccctgtttt-tacacaagaggttgtttccaggacttgaacccatgacctttcagtca 32233275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 42101967 - 42102019
Alignment:
Q  28 ttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||||||||||||  |||| ||||||| |||||||||||||  |||||||    
T  42101967 ttaccctgttttttacggaagaggctgtttccaggacttgaacttttgacctt 42102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 18724605 - 18724689
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  18724605 atttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 18724689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 14617136 - 14617052
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  14617136 atttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacat 14617052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 10668321 - 10668239
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10668321 ttggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 46248013 - 46248097
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || |||||||||||||||||||||||| ||||||| || ||||||||| |||||| |||| |||||||    
T  46248013 atttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacat 46248097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 35005200 - 35005139
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||    
T  35005200 cttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 35117829 - 35117910
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||||||  |||||||||| |||||||||||| ||| ||| |||||||||||| ||||||||||| |||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcac 35117910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 4430086 - 4430170
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || ||||||||||||||||||||||||  ||||||||| ||||| ||| ||||||||| | |||||||    
T  4430086 atttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacat 4430170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 30395790 - 30395862
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  30395790 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 46991894 - 46991818
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||  ||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| | |||||||    
T  46991894 tattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacat 46991818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 18944739 - 18944657
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||| |||||||  |||||||||| |||||||    
T  18944739 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacat 18944657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 32632617 - 32632697
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||| |||||||| ||  ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||    
T  32632617 atttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 32632697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 22327185 - 22327113
Alignment:
Q  18 gtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||  ||||||||||||||||||||||| | ||||| |||||||||||| || |||||||| |||||||    
T  22327185 gtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacat 22327113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 23768380 - 23768464
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| ||||||| || |||||||||  |||||||| | |||||||    
T  23768380 atttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacat 23768464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 25468323 - 25468399
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||| | ||||| |||||||||||| | |||||||||    
T  25468323 atttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttc 25468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 41319866 - 41319950
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||||||||||||  |||||| |||||||| |||  |||||||||| |||||||    
T  41319866 atttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacat 41319950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 9939558 - 9939475
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| ||||| || ||| |||||| ||||| ||| |||||| | ||||| |||||||||||||||||||||||| |||||||    
T  9939558 tttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacat 9939475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 27201744 - 27201661
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||  |||||||||||| | |||||||| ||||||| |||||||||||| | ||||||||| |||||||    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacat 27201661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 50760307 - 50760370
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| |||||||| || |||||||    
T  50760307 cttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacat 50760370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 20004154 - 20004236
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  |||||| |||||||||||| ||| ||||||| |||||||||||| ||||||||| | |||||||    
T  20004154 ttggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacat 20004236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 50812037 - 50811955
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||||||||| |||||| |||   ||||||||||| |||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcac 50811955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 2435848 - 2435929
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||| ||  |||||||| ||||| ||||| || ||||||| |||||||||||| ||||||||||| |||||    
T  2435848 tttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcac 2435929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 17470407 - 17470488
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| |||||||  ||||||||||| | ||||| ||| |||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcac 17470488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 34725166 - 34725240
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  34725166 tattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 34725240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 38478342 - 38478424
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| |||||||  ||||||||||| ||||||||||| |||||||    
T  38478342 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacat 38478424  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 47214607 - 47214525
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||||||||||||  | ||||||  |||||| |||||||||||| ||||||||||| |||||||    
T  47214607 atttggtgtattgtacgcaaccttaccctgtttt--aaacaagagactgtttccaggacttgaacccgtgacctttcagtcacat 47214525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 22930129 - 22930211
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||| ||||| ||||||||||||| ||||||| | ||||||| |||||||||||| | ||||||||| |||||||    
T  22930129 atttggtgtattgt-cacaaccttaccctgtttt-tacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacat 22930211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 6925177 - 6925114
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| |||||||||||||| ||| ||| |||||||||||| ||||||||| | |||||||    
T  6925177 cttaccctattttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacat 6925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 19701667 - 19701585
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 89  Q
    |||||| |||||||| ||  ||||||  ||||||||||||||| |||||||||| ||||| ||| |||||| |||| ||||||    
T  19701667 tttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcaca 19701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 25290242 - 25290177
Alignment:
Q  27 cttaccctgttttttacacaagaagc--tgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||||||| ||  ||||| || ||||||||| ||||||||||| |||||||    
T  25290242 cttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacat 25290177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 12126897 - 12126971
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||||||||||| ||| |||| ||| |||||||||||    
T  12126897 atttggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccagaacttaaacccgtgacctttc 12126971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 20036319 - 20036234
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttt-tttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| ||||| || |||||||||||| | | |||||||||||   ||||| |||||||||||| ||||||||||| |||||||    
T  20036319 atttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacat 20036234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 23371221 - 23371141
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||| |||||||||||| ||| ||| ||||||||| ||||  |||||||  ||||||||||| ||||||||||| ||||    
T  23371221 atttggtgtattgtacacaaccttgccc-gttttttacccaagtggctgtttctaggacttgaacccgtgacctttcagtca 23371141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 27136713 - 27136786
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    |||||| |||||||| ||| |||||| |||||||||||||||| | ||||  ||| ||||||||||||| ||||    
T  27136713 tttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtcctt 27136786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 35253247 - 35253329
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| |||||||  ||||||||||| ||||| ||||| |||||||    
T  35253247 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 45812627 - 45812679
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||  |||||||||||||||||||  |||||||||| |||||||    
T  45812627 ttttacacaagagactgttttcaggacttgaacctgtgacctttcagtcacat 45812679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 6983871 - 6983951
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||| |||||||| ||  |||||||||||||||| || ||  ||||||| ||||||||||||  |||||||||| |||||    
T  6983871 atttggtgtattgtacgcatacttaccctgttttttatacgag--gctgtttccaggacttgaacctgtgacctttcagtcac 6983951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 8197120 - 8197057
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||||||||||| ||  ||  |||||||||||| ||||||||||| |||||||    
T  8197120 cttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacat 8197057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 33223080 - 33222998
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||| ||| |||||||||| |||||||| ||||||| || ||||| ||  ||||||||||| |||||||    
T  33223080 tttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgtttccatgacttaaatccgtgacctttcagtcacat 33222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 45264461 - 45264536
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||| ||||| |||||  ||||| ||||||||| ||||||| | ||||| ||||||||||||  ||||||||||    
T  45264461 tttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaacatgtgacctttc 45264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 20169157 - 20169207
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 64  Q
    ||||||||||| ||||||| | |||||||||||||| | ||||||||||||    
T  20169157 tattgtacacagtcttacctttttttttacacaagagggtgttttcaggac 20169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 39215020 - 39215094
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 81  Q
    ||||| ||||||||| ||  ||||||| ||||||||||||||| | ||||| ||| ||||||||| | |||||||    
T  39215020 tttggaatattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaacttgggaccttt 39215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 30682900 - 30682848
Alignment:
Q  17 tgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    |||||||||||||||| ||||||| |||||||| ||| ||||||||| ||||||    
T  30682900 tgtacacaatcttaccttgttttt-acacaagaggctattttcaggatttgaac 30682848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 2435983 - 2436035
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||||||| || | ||||| |||||||||||| ||||||||||| |||||    
T  2435983 ttttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcac 2436035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 11596610 - 11596527
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||| ||| ||  |||||||||||||| |||||||| | |||||  ||||||||||| |||||| |||| |||||||    
T  11596610 atttggtgtattatacgcagccttaccctgttttt-acacaagaggttgtttctaggacttgaacccgtgacatttcagtcacat 11596527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 15511232 - 15511296
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 91  Q
    ||||||||||||||||||||||| || |||| |||||||| ||   |||||||||| | ||||||    
T  15511232 cttaccctgttttttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacatt 15511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 8247751 - 8247833
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  8247751 ttggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 8247833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12914090 - 12914180
Alignment:
Q  1 tcactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 91  Q
    |||| ||||||| |||||||| |   ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  12914090 tcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacatt 12914180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 13730666 - 13730748
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  13730666 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 13730748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 30928209 - 30928291
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||| ||||||| |||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  30928209 ttggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 30928291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 516485 - 516422
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  516485 cttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 13628854 - 13628936
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  |||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  13628854 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 13628936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 46421099 - 46421181
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||  |||||||    
T  46421099 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacat 46421181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 34420725 - 34420786
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||    
T  34420725 cttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcac 34420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 4495724 - 4495808
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||||||||||| | ||| |||||||||||||||| ||||||||| | |||||||    
T  4495724 atttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacat 4495808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 26573222 - 26573142
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||| |||||||| ||  |||||||||||||||||||| || ||||||| |||||||||||| ||||||||||| |||||    
T  26573222 ttggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcac 26573142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 29366784 - 29366866
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  |||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||  |||||||    
T  29366784 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacat 29366866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 7943079 - 7943003
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| || ||||||||||||||||| |||||| ||||||| |||||||||||  ||||||||| | |||||||    
T  7943079 tattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacat 7943003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 40272872 - 40272956
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| | ||||| |||||||||||| | ||||||| | |||||||    
T  40272872 atttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacat 40272956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 10870033 - 10870095
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10870033 cttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10870095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 35417988 - 35417929
Alignment:
Q  31 ccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||| || |||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacat 35417929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 54032640 - 54032703
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| | |||||||    
T  54032640 cttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacat 54032703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 14987052 - 14986990
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| ||||||||||||    
T  14987052 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 1217185 - 1217111
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||| |||||||||||    
T  1217185 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttc 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 33926176 - 33926096
Alignment:
Q  9 tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||| |||||||||||  |||||||||||||| |||||||| ||| ||| |||||||||||| | ||||||||| |||||||    
T  33926176 tggtgtattgtacacagccttaccctgttttt-acacaagaggctatttccaggacttgaacccatgacctttcagtcacat 33926096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 39203611 - 39203529
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||||||||||||  |||||||| |||||||  |||||||||||  |||||||||| |||||||    
T  39203611 atttggtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacat 39203529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 45620890 - 45620971
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgtttt-ttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||| |||||||| ||  ||||||||||||| |||||||||| ||||||| ||| |||||||| ||||||||||| |||||    
T  45620890 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcac 45620971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 53062112 - 53062051
Alignment:
Q  29 taccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||| ||||| || ||||||| |||||||||||| ||||||||||| |||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacat 53062051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtg 75  Q
    |||||| |||||||| ||  |||||||||| |||||||||||| ||||||| |||||||||||| ||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 26869803 - 26869720
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||| |||| ||| ||||||| ||||||||||||  |||||||||| |||||||    
T  26869803 atttggtgtattgtacgcagccttaccctgttttt-acaccagaggctgtttccaggacttgaacctgtgacctttcagtcacat 26869720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 53996647 - 53996707
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||||||||||||||||||| | ||||| || ||||||||| ||||||||||| ||||    
T  53996647 cttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtca 53996707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 9607279 - 9607216
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||   ||||||||| |||||||    
T  9607279 cttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacat 9607216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 55401272 - 55401209
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    |||||| |||| ||| || ||||| |||||||||||||||||| ||||||| ||||||||||||    
T  55401272 tttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaac 55401209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 5173811 - 5173864
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  5173811 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 5173864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 7696947 - 7697029
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  ||||||||  |||||| |||||||||||| ||||||||||  |||||||    
T  7696947 atttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgtgaccttttagtcacat 7697029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 22122977 - 22123059
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  ||||||||  |||||| |||||||||||| || |||||||| |||||||    
T  22122977 atttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgcgacctttcagtcacat 22123059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 33235621 - 33235552
Alignment:
Q  14 tattgtacacaatcttaccctgtt-ttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||| |||||||||||| |||||||||||| ||| ||| || || ||||||| ||||||||||    
T  33235621 tattgtacacagtcttaccctgtttttttacacaagaggctctttacacgatttgaacttgtgacctttc 33235552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 52428533 - 52428614
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcag-gacttgaactcgtgacctttc 82  Q
    ||||||||||| |||||||| ||  |||||||||| |||||||||||| |||| || ||| ||||| ||| |||||||||||    
T  52428533 cactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttc 52428614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 12525483 - 12525423
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||||  |||||||||| ||||    
T  12525483 cttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtca 12525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 19731091 - 19731023
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||| ||| |||||| |||||||||||||||| ||| ||| ||||||||| |  |||||||||||    
T  19731091 tattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttgcatccgtgacctttc 19731023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 22609862 - 22609779
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||| |||||||| ||||||| || ||||||||| ||| ||||| | |||||||    
T  22609862 atttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaagacttgaacccgttaccttacagtcacat 22609779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 39212079 - 39212003
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| || ||||||| |||| ||||||||||| | | ||| |||||||||||| |||||| |||| |||||||    
T  39212079 tattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacat 39212003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 1121286 - 1121361
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||| |||||||| || ||| ||| | ||| |||||||||||| ||||| |||||||| ||| |||||||||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttc 1121361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 45139559 - 45139622
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||| |||||||||||| | ||||| ||  |||||||| ||||||||||| |||||||    
T  45139559 cttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacat 45139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 45786277 - 45786328
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgtttt 58  Q
    |||||| |||||||| ||  ||||||||||||||||||||||| ||||||||    
T  45786277 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttt 45786328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 6411882 - 6411954
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacct 79  Q
    ||||||| |||||||| ||  ||||||||||||| ||||||||| ||||||| || ||||||||| | ||||||    
T  6411882 atttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttacaagacttgaacccatgacct 6411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 25944565 - 25944484
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||| ||  ||| ||| ||||||||||| ||| || |||| |||||||||||| | ||||||||| |||||    
T  25944565 tttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcac 25944484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 31592944 - 31592882
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| ||||||||||||    
T  31592944 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 43114950 - 43114995
Alignment:
Q  27 cttaccctgtttt-ttacacaagaagctgttttcaggacttgaact 71  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||    
T  43114950 cttaccctgtttttttacacaagaggctgtttccaggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 45948919 - 45948972
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    |||||||| |||||||||||||| | ||||| ||||| |||||| |||||||||    
T  45948919 cttaccctattttttacacaagaggttgtttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 49013537 - 49013586
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttt 57  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| |||||||    
T  49013537 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 49013586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 52926305 - 52926354
Alignment:
Q  41 tacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  52926305 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 52926354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 54374427 - 54374488
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||||| |||||||||||||| | ||||| || |||||||||  |||||||||| |||||    
T  54374427 cttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 9276361 - 9276313
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctg 54  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| ||||    
T  9276361 atttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 19751667 - 19751599
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||| ||| |||||| || ||||||||||||| ||| ||| ||||||||| |  |||||||||||    
T  19751667 tattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctttc 19751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 59051 - 58968
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| || ||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  59051 tttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 58968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 2626597 - 2626510
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttt---acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || ||||||||||||||||   |||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  2626597 atttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacat 2626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 17823651 - 17823567
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||| ||| || ||||| |||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  17823651 atttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacat 17823567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 36720871 - 36720787
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  36720871 atttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 36720787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 18164821 - 18164903
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  18164821 tttggtgtattgtacgcaaccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 18164903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 28817694 - 28817770
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  28817694 tattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 28817770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 35261754 - 35261670
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||  |||||| |||| ||||||| ||||||||| | |||||||    
T  35261754 atttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacat 35261670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 20869560 - 20869640
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||||||  |||||||||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  20869560 ttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 20869640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 29521745 - 29521828
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 89  Q
    ||||||| |||||||| ||  |||||||||||||||| |||||| ||||||| |||||||||||| ||||||||| | ||||||    
T  29521745 atttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcaca 29521828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 39461058 - 39461132
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||| |||||||| ||  ||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  39461058 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 39461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 5135349 - 5135418
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtg 75  Q
    ||||||| |||||||||||  |||||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  5135349 atttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 6760876 - 6760823
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  6760876 cttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 12670310 - 12670392
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  12670310 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 12670392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 44781567 - 44781648
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||| |||||||||||  |||||||||| |||||||||||| | ||||| |||||||||||| ||||| ||||| |||||    
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcac 44781648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 389720 - 389642
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttt--acacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||| |||||||| ||| |||||||||||||||  |||||||| | ||||| |||||||||||| |||||||||||    
T  389720 atttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 22598230 - 22598151
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtca 87  Q
    ||||| ||||||||| |  ||||||||||||||||||||||| | ||||| ||||| |||||| ||||||||||| ||||    
T  22598230 ttggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtca 22598151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 36918202 - 36918123
Alignment:
Q  3 actatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||| |||||||||||  |||||||||||||||||| |||||  ||||| ||| ||||||||  ||||||||||    
T  36918202 actatttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttc 36918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 44530224 - 44530150
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||| | ||||| || ||||||||| |||||||||    
T  44530224 atttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 26954206 - 26954133
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||| |||||||| ||  ||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||    
T  26954206 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 13160776 - 13160693
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||| |||||||| |||||||  ||||||||||| ||||||||| | |||||||    
T  13160776 atttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttctaggacttgaacccgtgaccttacagtcacat 13160693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 30454187 - 30454239
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  30454187 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 30454239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 30962857 - 30962909
Alignment:
Q  30 accctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  30962857 accctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttc 30962909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 11748369 - 11748290
Alignment:
Q  11 gtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||| |  |||||||||| |||||||| |||| ||||||| || ||||||||| |||||| |||| |||||||    
T  11748369 gtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacat 11748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 28407469 - 28407407
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||| | |||||||    
T  28407469 cttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 28407407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 7136591 - 7136673
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||| ||||||||||||| | ||||| |||||||||||| | ||||||| | |||||||    
T  7136591 ttggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacat 7136673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 20284163 - 20284217
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  20284163 ttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 20284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 21070792 - 21070846
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  21070792 ttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 21070846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 45071339 - 45071266
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||  |||||||||||||| |||||||| ||||||| ||| |||||||| |||||||||    
T  45071339 atttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccagaacttgaacccgtgacctt 45071266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 42083760 - 42083841
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    ||||||||| ||||| ||  ||| |||  |||||||||||| | ||||||| |||||||||||| ||||||||||| |||||    
T  42083760 tttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcac 42083841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 14018037 - 14018105
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||| || ||| ||||||||||||||||||||  |||||| || ||||||||| | |||||||||    
T  14018037 tattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttc 14018105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 8484000 - 8484062
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||| |||||||| ||  ||| ||||||||||||||||||| | ||||| ||||||||||||    
T  8484000 ttggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaac 8484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 12625965 - 12625891
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacct 79  Q
    ||||||| |||||||  || |||||||||||||||| |||||||| | ||||| |||||||||| | ||||||||    
T  12625965 atttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacct 12625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 25250595 - 25250513
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  | |||||| |||||||||||| | ||||||| ||||||||||||  |||||||| | |||||||    
T  25250595 ttggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacat 25250513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 29877169 - 29877111
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggac 64  Q
    ||||||| |||||||| ||  ||||||||||||||||||||| | ||||||| ||||||    
T  29877169 atttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 31457217 - 31457172
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||    
T  31457217 tttttacacaagaggttgtttacaggacttgaacccgtgacctttc 31457172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 35105995 - 35105922
Alignment:
Q  9 tggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||| |||||||| ||  ||||| || | |||||||||||| | ||||| |||||||||||| |||||||||||    
T  35105995 tggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttc 35105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 44742580 - 44742653
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    |||||| |||||||| ||  |||||||||||||||||||| ||   ||||| ||| |||||||||| |||||||    
T  44742580 tttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgacctt 44742653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 5689706 - 5689642
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaac 70  Q
    ||||||| |||||||| ||  ||||||||| ||||||||||||| ||| ||| || |||||||||    
T  5689706 atttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaagacttgaac 5689642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 8897824 - 8897908
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| ||||||||  |  |||||||| |||||||||||||  | ||||| |||||||| ||| ||||||||| | |||||||    
T  8897824 atttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 8897908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 12221979 - 12222061
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  ||||||||||||||||||||||| ||||||| || ||||||||| ||||||||||| |||||||    
T  12221979 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacat 12222061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 29355919 - 29356001
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||  |||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  29355919 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 29356001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 32728212 - 32728300
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||| ||  |||||||   |||||||||| |||||||    
T  32728212 cactatttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacat 32728300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 2166474 - 2166556
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||| |||| ||||| |||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  2166474 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 2166556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 2178107 - 2178189
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||| |||| ||||| |||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  2178107 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 2178189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 8409310 - 8409233
Alignment:
Q  14 tattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacatt 91  Q
    |||||||| ||  ||||||||||||||||||||||| || |||| |||||||||||  ||||||||||| ||||||||    
T  8409310 tattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacatt 8409233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 13905060 - 13905123
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||||||| |  ||||||||||||||| | ||||||||||| |||||||    
T  13905060 cttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacat 13905123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 14553585 - 14553511
Alignment:
Q  7 tttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 81  Q
    |||||| |||| ||||||  |||||||| |||||||||||||||||| ||| ||||||||||||  |||||||||    
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 17432394 - 17432332
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcaca 89  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||  |||||||||| ||||||    
T  17432394 cttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 1347037 - 1346955
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||  ||||||| |||||||||||| ||||||||||| |||||||    
T  1347037 atttggtgtattgtacgcagccttaccctgtttt--acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacat 1346955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 1354817 - 1354899
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  1354817 atttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaaccagtgacctttcagtcacat 1354899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 23240886 - 23240964
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcac 88  Q
    |||||||||||||| ||| |||||||||||||  |||||||| ||||||| ||||||||| ||  |||||||||| |||||    
T  23240886 ttggtatattgtacgcaaacttaccctgtttt--acacaagaggctgtttccaggacttgcacctgtgacctttcagtcac 23240964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 9161167 - 9161114
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  9161167 tttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 9161114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 3815137 - 3815221
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| || || |||| | |||||||||||| |  |||||| |||||||||||| |||||| |||| |||||||    
T  3815137 atttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacat 3815221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 6024306 - 6024234
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||| |||||||| || ||||||| |||||||||||||||| |||||||  |||| |||||  |||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgacctt 6024234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14975168 - 14975224
Alignment:
Q  34 tgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||||| ||||||| |||||||||||  ||||||||| | |||||||    
T  14975168 tgttttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacat 14975224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 18277264 - 18277328
Alignment:
Q  17 tgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 81  Q
    ||||| ||| ||||||||| ||||||||||||| ||||||| || || |||||| ||||||||||    
T  18277264 tgtactcaaccttaccctgatttttacacaagaggctgtttccaagatttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 17448378 - 17448323
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||||||||||| | | ||||||||  |||||||| |||||||||||    
T  17448378 cttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttc 17448323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 24097635 - 24097580
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    |||||||||||||||| |||||| |||| ||  ||||||| |||||||||||||||    
T  24097635 cttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttc 24097580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 4136598 - 4136648
Alignment:
Q  27 cttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgac 77  Q
    |||||||||| |||||||||||| | |||||| ||||||||||| ||||||    
T  4136598 cttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgac 4136648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 20400744 - 20400658
Alignment:
Q  4 ctatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||| || || ||||| || ||||||||||||||||||||||||   ||||| ||  ||||||||  |||||||||| |||||||    
T  20400744 ctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacat 20400658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 27855528 - 27855582
Alignment:
Q  36 ttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||| |||||||||||| |||||| |||||| ||| |||| |||||||    
T  27855528 ttttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacat 27855582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 22967215 - 22967162
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||| ||||| || |||||||||| |||||||| | |||||||    
T  22967215 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacat 22967162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 23821178 - 23821231
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||| ||||| || |||||||||| |||||||| | |||||||    
T  23821178 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacat 23821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 28007701 - 28007628
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgaccttt 81  Q
    ||||||| |||||||| ||  || ||||||||||  |||||||| ||| ||| |||||||||||| ||||||||||    
T  28007701 atttggtgtattgtacgcagcctgaccctgtttt--acacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 10106 - 10192
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||| |||||||| || |||||| |||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  10106 cactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 20434 - 20520
Alignment:
Q  2 cactatttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||| |||||||| || |||||| |||||||  |||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  20434 cactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 20520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 4230 - 4148
Alignment:
Q  8 ttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||| |||||||| ||| |||| ||||| |||||||||||| | ||||| |||||||||||| ||||||||||| |||||||    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacat 4148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 46906 - 46832
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctt 80  Q
    ||||||| |||||||| ||| |||||||| |||||||||||||| | ||||| ||| |||||||| |||||||||    
T  46906 atttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaacccgtgacctt 46832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 24832 - 24911
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| | |||||| ||  ||||||||||||||||||||||| ||||||     ||||||||| | ||||||||| |||||||    
T  24832 atttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacat 24911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 11174 - 11122
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  11174 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 11122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 10862 - 10801
Alignment:
Q  29 taccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||||||||| | |||||||||  ||||||| ||||||||| | |||||||    
T  10862 taccctgttttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcacat 10801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 30652 - 30570
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  | |||||||||||  |||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  30652 atttggtgtattgtacgcagccctaccctgtttt--acacaagaggctgtttccaggacttgaaccggtgacctttcagtcacat 30570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 35077 - 35162
Alignment:
Q  6 atttggtatattgtacacaatcttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| |||||||| ||  |||||||||||||   ||||||||  ||||||||||||||||||| ||||||||| | |||||||    
T  35077 atttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacat 35162  T

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Target: scaffold1176 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 1677 - 1729
Alignment:
Q  38 ttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||| | |||||||||||||||||| | ||||||||| |||||||    
T  1677 ttttacacaagaggttgttttcaggacttgaacccatgacctttcagtcacat 1729  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 13114 - 13167
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||| ||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  13114 tttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacat 13167  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 43173 - 43128
Alignment:
Q  37 tttttacacaagaagctgttttcaggacttgaactcgtgacctttc 82  Q
    ||||||||||||| |||||||  ||||| |||||||||||||||||    
T  43173 tttttacacaagaggctgtttctaggacctgaactcgtgacctttc 43128  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 23650 - 23590
Alignment:
Q  30 accctgttttttacacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    |||||||||||||||||||| | ||||| || ||||||||| |||  |||||| |||||||    
T  23650 accctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttcagtcacat 23590  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 226486 - 226550
Alignment:
Q  27 cttaccctgtttttt-acacaagaagctgttttcaggacttgaactcgtgacctttcggtcacat 90  Q
    ||||||||||||||| | |||||| |||||||  ||||||||||  ||||||||||| |||||||    
T  226486 cttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacat 226550  T

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