View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5409-Insertion-5 (Length: 582)

Name: NF5409-Insertion-5
Description: NF5409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5409-Insertion-5
NF5409-Insertion-5
[»] chr3 (40 HSPs)
chr3 (34-582)||(26856784-26857330)
chr3 (34-244)||(53785586-53785794)
chr3 (34-244)||(32546672-32546880)
chr3 (34-229)||(39583251-39583444)
chr3 (34-229)||(37133021-37133214)
chr3 (34-244)||(44198644-44198852)
chr3 (34-240)||(26772639-26772843)
chr3 (34-244)||(52741534-52741742)
chr3 (37-203)||(3443337-3443501)
chr3 (43-205)||(25324945-25325107)
chr3 (97-244)||(44710-44860)
chr3 (34-244)||(13582387-13582594)
chr3 (34-195)||(38145982-38146141)
chr3 (34-210)||(52411913-52412087)
chr3 (34-229)||(38670902-38671095)
chr3 (53-205)||(5338562-5338711)
chr3 (37-205)||(7900774-7900940)
chr3 (109-244)||(4763888-4764022)
chr3 (51-210)||(38978836-38978995)
chr3 (53-160)||(51234577-51234684)
chr3 (92-205)||(37992249-37992361)
chr3 (51-205)||(4472978-4473131)
chr3 (35-204)||(54508407-54508574)
chr3 (57-237)||(7502055-7502233)
chr3 (72-244)||(21552541-21552717)
chr3 (34-244)||(49017844-49018048)
chr3 (35-230)||(46940793-46940989)
chr3 (123-244)||(3643030-3643149)
chr3 (139-241)||(4669788-4669890)
chr3 (107-149)||(25094665-25094707)
chr3 (107-201)||(42205987-42206081)
chr3 (107-176)||(25190027-25190096)
chr3 (129-160)||(4190826-4190857)
chr3 (129-160)||(4190998-4191029)
chr3 (114-205)||(32690966-32691057)
chr3 (113-195)||(7257655-7257737)
chr3 (118-204)||(26393790-26393876)
chr3 (74-156)||(43123110-43123192)
chr3 (103-147)||(4669086-4669130)
chr3 (166-242)||(26276494-26276570)
[»] chr8 (37 HSPs)
chr8 (34-244)||(38815171-38815379)
chr8 (72-241)||(22589395-22589563)
chr8 (34-244)||(3187847-3188054)
chr8 (38-244)||(24124905-24125109)
chr8 (86-244)||(18804490-18804647)
chr8 (34-225)||(6592472-6592660)
chr8 (69-241)||(37514101-37514273)
chr8 (34-231)||(39434557-39434752)
chr8 (36-176)||(35740010-35740148)
chr8 (96-174)||(3821171-3821249)
chr8 (34-228)||(6618178-6618369)
chr8 (34-244)||(25021836-25022044)
chr8 (92-230)||(4699762-4699899)
chr8 (65-230)||(8540428-8540596)
chr8 (87-152)||(40223476-40223541)
chr8 (96-176)||(3863262-3863342)
chr8 (57-161)||(28196152-28196256)
chr8 (96-242)||(4073413-4073559)
chr8 (99-205)||(9259377-9259483)
chr8 (34-150)||(500199-500312)
chr8 (99-154)||(8115779-8115834)
chr8 (57-244)||(43823866-43824053)
chr8 (92-174)||(39671250-39671332)
chr8 (99-177)||(5329687-5329765)
chr8 (96-189)||(3825567-3825660)
chr8 (136-205)||(24451037-24451105)
chr8 (137-205)||(4066761-4066829)
chr8 (113-163)||(12598162-12598212)
chr8 (34-130)||(8882319-8882412)
chr8 (103-154)||(10950739-10950790)
chr8 (103-154)||(10958744-10958795)
chr8 (118-177)||(42659171-42659230)
chr8 (69-155)||(121776-121862)
chr8 (166-244)||(500119-500197)
chr8 (186-244)||(18596771-18596829)
chr8 (145-230)||(8882235-8882320)
chr8 (188-240)||(44337221-44337272)
[»] chr7 (40 HSPs)
chr7 (34-244)||(19277168-19277378)
chr7 (34-244)||(21326860-21327068)
chr7 (34-228)||(24527482-24527674)
chr7 (34-244)||(982826-983034)
chr7 (34-244)||(45613864-45614072)
chr7 (34-241)||(4501139-4501343)
chr7 (39-205)||(48539097-48539261)
chr7 (99-244)||(25187016-25187161)
chr7 (29-228)||(5825166-5825363)
chr7 (34-201)||(27521391-27521556)
chr7 (34-244)||(32584477-32584686)
chr7 (57-244)||(22197864-22198050)
chr7 (57-244)||(22239771-22239957)
chr7 (34-240)||(40726502-40726706)
chr7 (34-177)||(30216080-30216221)
chr7 (41-230)||(28517316-28517503)
chr7 (34-228)||(10905011-10905202)
chr7 (34-174)||(43856821-43856959)
chr7 (59-205)||(5972261-5972407)
chr7 (51-205)||(34772698-34772851)
chr7 (77-230)||(41117833-41117987)
chr7 (37-195)||(42295209-42295365)
chr7 (71-201)||(23037465-23037594)
chr7 (73-177)||(23792956-23793060)
chr7 (125-230)||(43333941-43334046)
chr7 (127-240)||(45003010-45003123)
chr7 (42-161)||(6634993-6635110)
chr7 (92-138)||(9281209-9281255)
chr7 (92-138)||(9292180-9292226)
chr7 (34-142)||(10032193-10032299)
chr7 (142-244)||(27027758-27027860)
chr7 (154-241)||(29054729-29054816)
chr7 (92-142)||(23890257-23890307)
chr7 (187-240)||(38766205-38766258)
chr7 (105-177)||(44525929-44526001)
chr7 (134-205)||(38839242-38839313)
chr7 (92-138)||(2904348-2904394)
chr7 (198-240)||(38832183-38832225)
chr7 (148-205)||(2904296-2904353)
chr7 (213-241)||(21454650-21454678)
[»] scaffold0009 (1 HSPs)
scaffold0009 (38-244)||(102983-103187)
[»] chr2 (35 HSPs)
chr2 (34-244)||(4413088-4413296)
chr2 (53-244)||(17344515-17344706)
chr2 (34-244)||(18744976-18745184)
chr2 (35-244)||(41867931-41868137)
chr2 (34-241)||(9685437-9685642)
chr2 (37-237)||(28224884-28225082)
chr2 (72-244)||(13413228-13413400)
chr2 (34-244)||(19161805-19162013)
chr2 (95-230)||(7760926-7761061)
chr2 (34-228)||(5532314-5532504)
chr2 (34-163)||(34814841-34814967)
chr2 (40-163)||(20142753-20142874)
chr2 (98-201)||(16351928-16352031)
chr2 (70-177)||(44686360-44686467)
chr2 (76-162)||(3825685-3825771)
chr2 (72-214)||(27502269-27502411)
chr2 (128-240)||(27494192-27494304)
chr2 (29-156)||(32029103-32029228)
chr2 (34-176)||(13147119-13147262)
chr2 (88-163)||(8036556-8036633)
chr2 (186-244)||(3208416-3208474)
chr2 (186-244)||(30602366-30602424)
chr2 (186-244)||(41702149-41702207)
chr2 (112-205)||(1296175-1296268)
chr2 (34-157)||(2886637-2886758)
chr2 (92-168)||(9200205-9200281)
chr2 (111-177)||(44684955-44685021)
chr2 (34-134)||(11921232-11921330)
chr2 (95-182)||(33612628-33612713)
chr2 (35-177)||(23484961-23485099)
chr2 (189-244)||(42122694-42122749)
chr2 (34-157)||(2888480-2888601)
chr2 (153-245)||(15515286-15515378)
chr2 (57-173)||(29808023-29808139)
chr2 (95-147)||(44720296-44720348)
[»] chr1 (36 HSPs)
chr1 (34-244)||(22346772-22346980)
chr1 (34-244)||(21472880-21473088)
chr1 (34-244)||(28041149-28041357)
chr1 (53-236)||(34644451-34644634)
chr1 (41-244)||(24177540-24177741)
chr1 (34-230)||(20259819-20260013)
chr1 (34-161)||(29169815-29169940)
chr1 (34-228)||(2764372-2764564)
chr1 (34-228)||(2898595-2898786)
chr1 (34-163)||(45659670-45659795)
chr1 (37-230)||(4862014-4862206)
chr1 (37-229)||(31737348-31737537)
chr1 (34-177)||(38731553-38731694)
chr1 (124-244)||(868513-868631)
chr1 (72-244)||(7213120-7213299)
chr1 (144-244)||(30688434-30688534)
chr1 (34-149)||(42919832-42919945)
chr1 (57-229)||(47459575-47459746)
chr1 (105-160)||(35387747-35387802)
chr1 (35-161)||(50314647-50314771)
chr1 (44-147)||(18616184-18616286)
chr1 (166-240)||(5453976-5454050)
chr1 (92-148)||(50161498-50161554)
chr1 (169-244)||(1114023-1114098)
chr1 (117-174)||(6670208-6670265)
chr1 (197-242)||(44420591-44420636)
chr1 (121-205)||(11128361-11128445)
chr1 (101-229)||(36486770-36486897)
chr1 (166-237)||(7483769-7483839)
chr1 (106-229)||(48841174-48841297)
chr1 (186-244)||(19035356-19035414)
chr1 (34-103)||(19035465-19035532)
chr1 (104-145)||(3401886-3401927)
chr1 (104-145)||(3444892-3444933)
chr1 (149-241)||(4611069-4611161)
chr1 (186-230)||(21934268-21934312)
[»] chr6 (23 HSPs)
chr6 (34-240)||(17249327-17249531)
chr6 (40-240)||(33220739-33220937)
chr6 (34-205)||(4206618-4206787)
chr6 (34-244)||(28625808-28626016)
chr6 (34-205)||(4165944-4166113)
chr6 (34-156)||(45699-45819)
chr6 (34-244)||(959458-959665)
chr6 (34-230)||(29338101-29338295)
chr6 (34-218)||(34304399-34304581)
chr6 (129-242)||(3137362-3137475)
chr6 (105-217)||(32115622-32115734)
chr6 (57-236)||(34554320-34554498)
chr6 (34-153)||(34415404-34415521)
chr6 (144-244)||(34168798-34168897)
chr6 (57-200)||(3714838-3714981)
chr6 (35-160)||(24016298-24016421)
chr6 (34-177)||(357739-357879)
chr6 (35-244)||(28009010-28009217)
chr6 (166-240)||(7749362-7749436)
chr6 (106-190)||(31703561-31703645)
chr6 (98-205)||(13398266-13398373)
chr6 (106-176)||(7200627-7200697)
chr6 (92-205)||(26225657-26225770)
[»] chr4 (49 HSPs)
chr4 (38-240)||(3329877-3330077)
chr4 (74-240)||(4419145-4419310)
chr4 (34-230)||(53619477-53619671)
chr4 (34-244)||(30940761-30940962)
chr4 (53-244)||(600731-600922)
chr4 (34-244)||(26521366-26521573)
chr4 (35-240)||(55933485-55933686)
chr4 (57-230)||(34107739-34107912)
chr4 (34-240)||(50000947-50001152)
chr4 (105-244)||(50464387-50464526)
chr4 (34-195)||(56462128-56462287)
chr4 (34-161)||(6865842-6865967)
chr4 (34-237)||(7536593-7536794)
chr4 (69-160)||(53170474-53170565)
chr4 (92-190)||(16955391-16955489)
chr4 (106-240)||(39001278-39001412)
chr4 (41-241)||(50462975-50463170)
chr4 (53-195)||(38535608-38535750)
chr4 (37-138)||(50483221-50483320)
chr4 (34-244)||(132262-132470)
chr4 (106-229)||(23255605-23255728)
chr4 (113-245)||(45661567-45661699)
chr4 (57-205)||(48656953-48657106)
chr4 (99-244)||(42455692-42455837)
chr4 (57-170)||(46440932-46441045)
chr4 (69-153)||(54190906-54190990)
chr4 (144-242)||(50442609-50442707)
chr4 (126-194)||(18981651-18981718)
chr4 (69-177)||(25504239-25504347)
chr4 (73-177)||(28739849-28739953)
chr4 (110-241)||(23233211-23233340)
chr4 (153-240)||(31846984-31847071)
chr4 (186-244)||(40392726-40392784)
chr4 (98-143)||(747853-747898)
chr4 (99-195)||(52403869-52403963)
chr4 (34-125)||(12918394-12918483)
chr4 (87-139)||(53098403-53098455)
chr4 (123-177)||(8738149-8738203)
chr4 (99-177)||(32312796-32312874)
chr4 (104-202)||(34213539-34213636)
chr4 (99-176)||(46391399-46391474)
chr4 (98-143)||(712677-712722)
chr4 (160-239)||(1041307-1041386)
chr4 (122-241)||(23242780-23242899)
chr4 (96-149)||(43849430-43849483)
chr4 (103-244)||(9601087-9601223)
chr4 (92-132)||(23605060-23605100)
chr4 (73-161)||(49344198-49344286)
chr4 (108-160)||(49354160-49354212)
[»] scaffold0490 (1 HSPs)
scaffold0490 (34-176)||(6279-6419)
[»] chr5 (34 HSPs)
chr5 (34-244)||(32269819-32270026)
chr5 (34-244)||(42921575-42921782)
chr5 (34-228)||(37873660-37873852)
chr5 (35-240)||(35310329-35310532)
chr5 (34-240)||(13166932-13167136)
chr5 (34-240)||(25663054-25663258)
chr5 (35-227)||(430496-430686)
chr5 (72-205)||(22188713-22188846)
chr5 (34-240)||(33692077-33692278)
chr5 (113-241)||(2566194-2566322)
chr5 (34-193)||(38875567-38875723)
chr5 (53-229)||(8100446-8100620)
chr5 (34-244)||(15292048-15292255)
chr5 (120-242)||(15506721-15506843)
chr5 (34-161)||(34335297-34335422)
chr5 (69-244)||(23423926-23424101)
chr5 (125-221)||(23023495-23023591)
chr5 (37-176)||(26212608-26212745)
chr5 (34-163)||(14423643-14423763)
chr5 (34-222)||(27336594-27336778)
chr5 (186-242)||(11005757-11005813)
chr5 (34-140)||(43115479-43115583)
chr5 (73-173)||(15833010-15833107)
chr5 (101-195)||(19260230-19260324)
chr5 (34-131)||(43129524-43129619)
chr5 (92-156)||(41343516-41343581)
chr5 (37-152)||(14723269-14723382)
chr5 (92-136)||(27294423-27294467)
chr5 (121-168)||(16017126-16017173)
chr5 (87-162)||(15810008-15810081)
chr5 (92-156)||(7716146-7716210)
chr5 (95-134)||(16598893-16598932)
chr5 (189-244)||(27913507-27913561)
chr5 (121-177)||(3114247-3114303)
[»] scaffold0148 (1 HSPs)
scaffold0148 (34-244)||(33127-33335)
[»] scaffold1768 (1 HSPs)
scaffold1768 (53-244)||(223-414)
[»] scaffold0470 (1 HSPs)
scaffold0470 (34-228)||(7496-7687)
[»] scaffold0031 (1 HSPs)
scaffold0031 (34-244)||(49292-49496)
[»] scaffold0186 (1 HSPs)
scaffold0186 (29-153)||(10329-10454)
[»] scaffold0224 (1 HSPs)
scaffold0224 (34-149)||(18386-18499)
[»] scaffold0119 (1 HSPs)
scaffold0119 (87-159)||(16068-16139)
[»] scaffold0406 (1 HSPs)
scaffold0406 (187-244)||(6765-6822)
[»] scaffold0309 (1 HSPs)
scaffold0309 (197-244)||(5201-5248)
[»] scaffold0493 (1 HSPs)
scaffold0493 (35-142)||(8539-8644)


Alignment Details
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 34 - 582
Target Start/End: Original strand, 26856784 - 26857330
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| |||||||||||||  ||||||||| |||||||||||||| ||||| ||||| |||||| ||||  |||||||||||||||||||||||||||||    
T  26856784 gtgttgtgacaatcaacat--gcttttataccatctgcttttgacgctttcgatttcctagcactagagactgttgaccttctacatagagttcaaaggg 26856881  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  26856882 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgaggattggttttaccatccaaaaaggcctagcggcgcagcttgttgctcg 26856981  T
Q  234 cttgccttctacatattataattaccttttgtacacaaaagctaataaaataaaagtactaatccaatcattgtggtttgtgtgcatgcttatacagatc 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26856982 cttgccttctacatattataattaccttttgtacacaaaagctaataaaataaaagtactaatccaatcattgtggtttgtgtgcatgcttatacagatc 26857081  T
Q  334 atgaacgtggcgggcttcacattattgctgataatgacagtaacaacaacagcaatattcactcctctaatctccatattatatgatccaacaaggccat 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26857082 atgaacgtggcgggcttcacattattgctgataatgacagtaacaataacagcaatattcactcctctaatctccatattatatgatccaacaaggccat 26857181  T
Q  434 acatgttaaaccaaagaagggacattcaacacaatccaccagaggtagaacttcgaatagttttatgcattcttgacgccgaaaacacaaatggactcgt 533  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26857182 acatgttgaaccaaagaagggacattcaacacaatccaccagaggtagaacttcgaatagttttatgcattcttgacgccgaaaacacaaatggactcat 26857281  T
Q  534 ccatctacttgatgtcacaaatccaacctcagaatatccaatttcagtt 582  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26857282 ccacctacttgatgtcacaaatccaacctcagaatatccaatttcagtt 26857330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 53785794 - 53785586
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  53785794 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaagg 53785697  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||||||||||||||  ||||||||| || || ||| |||||||||| ||||||||  ||| | ||||||| |||||||||| ||    
T  53785696 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttatgtttacgaggattggttttgccatccaacaaggtccagcggcgtagcttgttgcccg 53785597  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  53785596 cttgccttcta 53785586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 32546880 - 32546672
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||| |||||||||||||  |||||||| ||| ||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||  |    
T  32546880 gtgttcggacaatcaacata--cttttataccatttgcttttgacactttcagtttcctagcaccaaaggctgttgaccttctacatagagttcaaaaag 32546783  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||| |||||||||||||||||||  |||||||||||| |  ||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||    
T  32546782 tcatgcatagtaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccg 32546683  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  32546682 cttgccttcta 32546672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 34 - 229
Target Start/End: Original strand, 39583251 - 39583444
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| || ||| |||||||||  |||| ||||| || |||||||||||||||| ||||||||||||||||    
T  39583251 gtgttctgacaatcaacat--gcttttatatcatttgttttcgacactttcggtttcctagcatcataggttgttgaccttctgcatagagttcaaaggg 39583348  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttg 229  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| || ||| ||||| |||| ||||||||| ||| ||||||||||| |||||||    
T  39583349 tcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgtgtttacgaggattgattttgccatccaaaaaggtctagcggcgcaacttgttg 39583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 34 - 229
Target Start/End: Original strand, 37133021 - 37133214
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| || |||| ||||||||  |||| |||||||||||||||||||||||||||||||||||| || ||    
T  37133021 gtgttctgacaatcaacatgt--ttttataccatttgttttttacactttcggtttcttagcaccagaggttgttgaccttctacatagagttctaaagg 37133118  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttg 229  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||   | |||||||||| | ||||||| ||| |||||||||||| ||||||    
T  37133119 tcatgcatagcaatgtcatgtctcctaagttaatgaatgttgtgtttataaggattggttttgcgatccaaaaaggtctagcggcgcagtttgttg 37133214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 44198852 - 44198644
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||| |||||||||  ||||||||| ||| ||||||||||||||||  |||| || |||| |||| |||||||||||||||||||||||| | ||    
T  44198852 gtgttctgagaatcaacat--gcttttataccatttgcttttgacactttcggtttcttaacacccgaggctgttgaccttctacatagagttcagaagg 44198755  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | ||||||||||||||||||||||||||||  |||||||||||| ||||||| |||| |||| ||||||||| |||   |||| | ||||||||||  ||    
T  44198754 ttatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttgcgataattgattttgccatccaaaaaggttgagcgacacagcttgttgtccg 44198655  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  44198654 cttgccttcta 44198644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 26772843 - 26772639
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||    ||| ||||| ||||||  |||||||||||| ||||||| ||||||     
T  26772843 gtgttctgacaatcaacat--gcttttataccatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttctatatagagtacaaagga 26772746  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | ||||||| |||||| |||||||||||||  |||||||||||| || ||| ||||| |||| ||||||||| ||| |||||||||||||||||||| ||    
T  26772745 ttatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgcccg 26772646  T
Q  234 cttgcct 240  Q
    |||||||    
T  26772645 cttgcct 26772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 52741534 - 52741742
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  52741534 gtgttctgacaatcaacat--gcttttataccatttgcttttgacacttttggtttcctagcaccagaggttgttgaccttctacatagagttcaaaagg 52741631  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||||||||||||||||||||| |  ||  || ||||  |  ||| |||| ||||| ||||||||| ||| |||||| |||| ||| |||| ||    
T  52741632 tcatgcatagcaatgtcatgtctcctagatccatttatcttgtattcacgaagatttgttttgccatccaaaaaggtctagcgacgcaacttattgcccg 52741731  T
Q  234 cttgccttcta 244  Q
    || ||||||||    
T  52741732 ctcgccttcta 52741742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 3443337 - 3443501
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    |||| |||||||||||  ||||||||| ||| | || |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  3443337 ttctaacaatcaacat--gcttttataccattttctgttgacactttcagtttcctagcactagaggttgttgaccttctacatagagttcaaagggtca 3443434  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatcca 203  Q
    ||| ||| |||||| |||||||||  | ||||||||||||| || |||||||||||||| |||||||    
T  3443435 tgcgtaggaatgtcttgtctcctaaatctatgaatgttgtgtttacgatgattggttttgccatcca 3443501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 25325107 - 25324945
Alignment:
Q  43 caatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcata 142  Q
    ||||||||||||| ||||||| ||| ||||||  |||||||| ||||| |||||||| || ||||||||||||||||||||||||||| | |||||||||    
T  25325107 caatcaacatatgtttttataccatttgctttcaacactttcgatttcctagcaccatagattgttgaccttctacatagagttcaaatgatcatgcata 25325008  T
Q  143 gcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||| || |||||  |  |||||| |||||||| ||||||||| |||| |||||||||    
T  25325007 gcaatgtcaagtttcctaaatccatgaatattgtgcttacgatgattgcttttgccatccaaa 25324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 44860 - 44710
Alignment:
Q  97 ccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatg---ttgtgcttgcgatgattggtt 193  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||   ||||| |  | | |||| |||    
T  44860 ccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtttcctaggtccatgaatgttgttgtgttcacaaggatttgtt 44761  T
Q  194 ttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    || ||||||||| ||| |||||||||||| ||||||| |||||||||||||    
T  44760 ttgccatccaaaaaggtctagcggcgcagtttgttgcccgcttgccttcta 44710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 13582594 - 13582387
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||| | |  ||||||| ||| || |||| |||||||  ||||| ||||||||    |||||||||||||||| |||||||||| ||    
T  13582594 gtgttctgacaatcaacgtgt--ttttataccatttgttttt-acacttttgatttcctagcaccaacaattgttgaccttctacagagagttcaaaagg 13582498  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| |||||||||||||||||||   |||||||||||| || ||| ||||| |||  ||||||||| |||||||||| ||| | || |||| ||    
T  13582497 tcatgcataacaatgtcatgtctcctaggaccatgaatgttgtgtttacgaagattgatttagccatccaaaaaggcctagcgacgctgtttattgcccg 13582398  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  13582397 cttgccttcta 13582387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 38146141 - 38145982
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| ||||||||||||| |  ||||||| ||| | | |||||||||||  | ||| ||||||||||||||||| || |||||| ||||||||||||||    
T  38146141 gtgttttgacaatcaacatgt--ttttataccatttacatttgacacttttgacttcctagcaccagaggttgtttacattctacttagagttcaaaggg 38146044  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||| || ||||||||| ||||    
T  38146043 tcatgcataacaatgtcatgtctcctaggtccatgaacgttgtgtttacgatgattgatttt 38145982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 52411913 - 52412087
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||  ||| |||||||||||||||||  ||  || ||| ||| || ||||||||||||||||||||||||||||    
T  52411913 gtgttctgacaatcaacat--gcttttattccatttgcttttgacactttcagctttctaacactagatgtcgttgaccttctacatagagttcaaaggg 52412010  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggc 210  Q
    ||||||||| ||||||||||||||||||    || ||| ||||| || | ||||||| |||| ||||||||| ||||    
T  52412011 tcatgcataacaatgtcatgtctcctagacccataaatattgtgtttacaatgattgattttgccatccaaaaaggc 52412087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 34 - 229
Target Start/End: Original strand, 38670902 - 38671095
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  |||||||||  || || ||||||||||||    ||  ||||| ||||||  | ||||||||||||||||||  |||| |    
T  38670902 gtgttctgacaatcaacat--gcttttatacaatttgtttttgacacttttggctttctagcatcagaggcggatgaccttctacatagagtctaaagag 38670999  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttg 229  Q
    | |||||||||||||| |||||||||||||  ||||||||||||  | ||| |||||||||| ||||| ||| | | |||||||||||||||||||    
T  38671000 ttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtgtacgaggattggttttgccatctaaaaaagtctagcggcgcagcttgttg 38671095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 5338711 - 5338562
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    |||||||||||  || ||||||||||||||||   ||| |||||| |||| |||||||| |||||||||||||||||| |||||||| |||||||||| |    
T  5338711 atgcttttatacaatttgcttttgacactttcggcttcctagcactagagattgttgacattctacatagagttcaaaaggtcatgcgtagcaatgtctt 5338612  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||| |||||    |||||||||| || ||| |||||||||| |||||||||    
T  5338611 gtctcataggt---cgaatgttgtgtttacgaggattggttttgccatccaaa 5338562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 37 - 205
Target Start/End: Complemental strand, 7900940 - 7900774
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||||||||||||  ||||||||| ||| || |||||||||||||   ||| ||||| |||||||||||||||||||||||||||||  |||| | |    
T  7900940 ttctgacaatcaacat--gcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgaccttctacatagagtttgaaggatta 7900843  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    | ||||||||||| |||| ||||||||  || ||| || || || | |||||| |||||||||||||||    
T  7900842 tacatagcaatgttatgtttcctaggtccatcaatattttgtttacaatgattagttttaccatccaaa 7900774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 4763888 - 4764022
Alignment:
Q  109 gaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaatag 208  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||  |||||||||||| || ||| |||| |  || ||||||||| ||    
T  4763888 gaccttctacatagagttcaaaaggttatgcatagcaatgtcatgtctcct-ggtccatgaatgttgtgtttacgaggattagaattgccatccaaaaag 4763986  T
Q  209 gcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    || | | |||||| |||||||| |||||||||||||    
T  4763987 gcttggtggcgcaacttgttgcccgcttgccttcta 4764022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 51 - 210
Target Start/End: Original strand, 38978836 - 38978995
Alignment:
Q  51 atatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtc 150  Q
    ||||| |||||||  || || ||||||||||||   |||| ||||||| ||||  |||||||||||||||| |||||||| ||| ||||||| |||||||    
T  38978836 atatgtttttatactatttgtttttgacacttttggtttcctagcacctgaggccgttgaccttctacatatagttcaaaaggtgatgcataacaatgtc 38978935  T
Q  151 atgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggc 210  Q
    ||||||| ||||||||| ||||||||| || |||  ||| ||||| ||||||||| ||||    
T  38978936 atgtctcataggtttatcaatgttgtgtttacgaaaattagttttgccatccaaaaaggc 38978995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 51234684 - 51234577
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||||||||| ||| |  ||||||||||||| | ||  ||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||    
T  51234684 atgcttttataccatttatttttgacactttcgactttctagcatcagaggttgttgaccttctacatagagttcaaaaggttatgcataacaatgttat 51234585  T
Q  153 gtctccta 160  Q
    ||||||||    
T  51234584 gtctccta 51234577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 37992361 - 37992249
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattgg 191  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||| || ||||||||| ||| || ||  |||||||||||| || ||| ||||||    
T  37992361 tagcactagaggttgttgaccttctacaaagagttcaa-gggtcatgcacagtaatgtcatgactcgtacgtgcatgaatgttgtgttttcgaagattgg 37992263  T
Q  192 ttttaccatccaaa 205  Q
    ||||| ||||||||    
T  37992262 ttttatcatccaaa 37992249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 51 - 205
Target Start/End: Complemental strand, 4473131 - 4472978
Alignment:
Q  51 atatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtc 150  Q
    ||||| |||||||  || || |||||||||||||   ||| ||||||||||  || || |||||||||||| |||||||||  |||||||||||||| ||    
T  4473131 atatgtttttatactatttgtttttgacactttcggcttcctagcaccagaa-ttcttaaccttctacataaagttcaaagaatcatgcatagcaatttc 4473033  T
Q  151 atgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||||||| ||||||| ||||| || |||  |||||||||  ||||||||    
T  4473032 atgtctcctaggtctatgaatattgtgtttacgagaattggttttgtcatccaaa 4472978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 54508407 - 54508574
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    |||||||||||| ||||| |  ||||||| ||| ||||||||||| |||  ||||  ||||||||||||||||||||||||| ||||  || |||||| |    
T  54508407 tgttctgacaattaacatgt--ttttatatcatttgcttttgacatttttgattttctagcaccagaggttgttgaccttctgcataaggtacaaaggat 54508504  T
Q  135 catgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaa 204  Q
    ||||| || |||| |||| ||| ||||||  |||||||||||| ||  ||| |||||||||  |||||||    
T  54508505 catgcgtaacaatatcatatctgctaggtccatgaatgttgtgtttaagataattggttttgtcatccaa 54508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 7502055 - 7502233
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| | ||||||||| |||   |||| |||||||||||||||||||||||||||  |||||| ||||||||||||| | |||||||||| ||    
T  7502055 ttttataccattttcttttgacatttttggtttcctagcaccagaggttgttgaccttctac--agagtttaaagggtcatgcacaacaatgtcatgact 7502152  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttg 237  Q
    | ||| |  |||||| || || || |||| |||| |||| | ||||||| || ||||| | | |||||||||||| |||||    
T  7502153 catagatccatgaatattatgtttacgataattgattttgctatccaaaaagacctagtgactcagcttgttgcttgcttg 7502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 21552717 - 21552541
Alignment:
Q  72 ttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagca----atgtcatgtctcctaggtttat 167  Q
    |||||||| ||||| |||| ||||| |||||  |||||||||||||||||||||||||| |||||||||||| |    || |||| ||||||||||  ||    
T  21552717 ttttgacattttcagtttcctagcatcagagactgttgaccttctacatagagttcaaaaggtcatgcatagtacgtaatatcatatctcctaggtccat 21552618  T
Q  168 gaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| || | |  |||||||||  |||||||| || | |  ||||||| |||||||| || || |||||||    
T  21552617 gaatgttgtgtttacaagaattggttttgacatccaaaaagacttgacggcgcaacttgttgcccgtttaccttcta 21552541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 49018048 - 49017844
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| ||||||||||| |  ||||||| ||| |  |||| ||||||||  |||| ||||||| ||||||||||| ||||||| || |||||||| ||    
T  49018048 gtgttctaacaatcaacatgt--ttttataccattttttttttacactttcggtttcctagcacccgaggttgttgatcttctacgtaaagttcaaaagg 49017951  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||  ||||||||||    |||||  |||||||||||| ||  || ||||| |||| ||||||||| ||     |||| |||||||||||  ||    
T  49017950 tcatgcatataaatgtcatgt----taggtcaatgaatgttgtgtttatgaggattgattttgccatccaaaaagtatcggcggtgcagcttgttgtccg 49017855  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  49017854 cttgccttcta 49017844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 35 - 230
Target Start/End: Original strand, 46940793 - 46940989
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgacc---ttctacatagagttcaaag 131  Q
    ||||| ||||||||||||  ||||||||| ||| || ||||||||||||  |  || |||||||| ||  | ||||||   |||||||||||||||||||    
T  46940793 tgttccgacaatcaacat--gcttttataccatttgtttttgacacttttgacgtcctagcaccatagactattgaccagcttctacatagagttcaaag 46940890  T
Q  132 ggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    | |||||||   |||||||||| ||| |||||| |||||||||||| || |||  |||| ||||   ||||||| || |||||||| ||| ||||||||    
T  46940891 gatcatgcacgacaatgtcatgactcataggttcatgaatgttgtgtttacgaaaattgattttgttatccaaaaagacctagcggtgcaacttgttgc 46940989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 123 - 244
Target Start/End: Complemental strand, 3643149 - 3643030
Alignment:
Q  123 agttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcag 222  Q
    |||||||||| ||||||||| ||||||||||| |  |||||  |||||||||||| ||  |||||||| ||||  ||||| || ||||||| || |||||    
T  3643149 agttcaaaggatcatgcataacaatgtcatgttttttaggtccatgaatgttgtgttt--gatgattgattttgtcatccgaaaaggcctaacgacgcag 3643052  T
Q  223 cttgttgctcgcttgccttcta 244  Q
    ||| |||| |||||||||||||    
T  3643051 cttattgcccgcttgccttcta 3643030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 4669788 - 4669890
Alignment:
Q  139 catagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgc 238  Q
    |||| |||||||||||||||| |||  |||||||||||| || ||||||||| ||||   ||||||| |||  | ||||||||||||||||| |||||||    
T  4669788 cataacaatgtcatgtctccttggtccatgaatgttgtgtttacgatgattgattttgttatccaaaaaggtttggcggcgcagcttgttgcccgcttgc 4669887  T
Q  239 ctt 241  Q
    |||    
T  4669888 ctt 4669890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 25094665 - 25094707
Alignment:
Q  107 ttgaccttctacatagagttcaaagggtcatgcatagcaatgt 149  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  25094665 ttgaccttctacatatagttcaaatggtcatgcatagcaatgt 25094707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 42206081 - 42205987
Alignment:
Q  107 ttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatc 201  Q
    ||||| |||||||||||||| ||| |||||||||||| ||||| |||| |||||| |  || || |||||| || ||||||||| ||||| ||||    
T  42206081 ttgacattctacatagagtttaaatggtcatgcatagaaatgtaatgtatcctagatccataaacgttgtgtttacgatgattgattttatcatc 42205987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 25190027 - 25190096
Alignment:
Q  107 ttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||  |||| |||| || ||||||||||||    
T  25190027 ttgaccttctacaaagagttcaaagagtcatgaatagaaatgtagtgtcgcctaagtatatgaatgttgt 25190096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 160
Target Start/End: Complemental strand, 4190857 - 4190826
Alignment:
Q  129 aagggtcatgcatagcaatgtcatgtctccta 160  Q
    ||||||||||||||||||||||||||||||||    
T  4190857 aagggtcatgcatagcaatgtcatgtctccta 4190826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 160
Target Start/End: Complemental strand, 4191029 - 4190998
Alignment:
Q  129 aagggtcatgcatagcaatgtcatgtctccta 160  Q
    ||||||||||||||||||||||||||||||||    
T  4191029 aagggtcatgcatagcaatgtcatgtctccta 4190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 32690966 - 32691057
Alignment:
Q  114 tctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||||||| |||| |||||||| |  ||| | |||||||||| || ||||||||||||| ||  || ||||| ||||| ||||||||    
T  32690966 tctacatagagttaaaagagtcatgcacaataatattatgtctcctaagtctatgaatgttgtgtttaagaggattgattttatcatccaaa 32691057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 7257655 - 7257737
Alignment:
Q  113 ttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    ||||||||| |||||||||||  || ||||||||| |||||| | ||||||  |||||||||||| || ||| |||| |||||    
T  7257655 ttctacatatagttcaaagggctatccatagcaatatcatgtattctaggtccatgaatgttgtgtttacgaagattagtttt 7257737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 26393790 - 26393876
Alignment:
Q  118 catagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaa 204  Q
    ||||||||| |||||| |||  |||||||| | ||||||||| ||| ||||||||||||| || ||| ||||| | || ||||||||    
T  26393790 catagagttaaaagggacattgatagcaatattatgtctccttggtctatgaatgttgtgtttacgaggattgatatttccatccaa 26393876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 43123192 - 43123110
Alignment:
Q  74 ttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||||||  ||||  |||||||| || |||||||| ||||||| | ||||||||||||| ||||||| ||| | ||||||    
T  43123192 ttgacacttttgattttctagcaccatagtttgttgactttctacaaaaagttcaaagggtcgtgcatagaaatattatgtct 43123110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 4669086 - 4669130
Alignment:
Q  103 gttgttgaccttctacatagagttcaaagggtcatgcatagcaat 147  Q
    |||||||||||||||||||||||||| | | ||||||||| ||||    
T  4669086 gttgttgaccttctacatagagttcagaagatcatgcataacaat 4669130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 26276570 - 26276494
Alignment:
Q  166 atgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttc 242  Q
    |||||||||||| ||  || ||||| |||| ||||||||| ||  ||||||| | |||||||||| |||||||||||    
T  26276570 atgaatgttgtgtttatgaggattgattttgccatccaaaaagatctagcggtgtagcttgttgcccgcttgccttc 26276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 1e-70; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 38815379 - 38815171
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||||||||    
T  38815379 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttccgcttcctagcaccagagggtgttgaccttctacatagagttcaaaggg 38815282  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||||||||||||||  |||||||||||| || ||| |||||||||| ||||||||| |||| ||||||||||||||||||| ||    
T  38815281 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttttccatccaaaaaggcttagcggcgcagcttgttgcccg 38815182  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  38815181 cttgccttcta 38815171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 22589395 - 22589563
Alignment:
Q  72 ttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaat 171  Q
    |||||||||||||  |||| |||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  22589395 ttttgacactttcggtttcctagcaccagaggctgttgacttt-tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcataggtctatgaat 22589493  T
Q  172 gttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcctt 241  Q
    |||||| |  ||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||    
T  22589494 gttgtgttcacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctt 22589563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 3188054 - 3187847
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||| ||||||   ||| ||||| ||||||||||| |||||||||||||||| |||||||    
T  3188054 gtgttctgacaatcaacat--gcttttataccatttgcttttgaaactttcggcttcctagcatcagaggttgttaaccttctacatagagt-caaaggg 3187958  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | |||||||||||||| |||||||||||||  |||||||||||| || |||  ||||||||| ||||||||| ||| ||| ||| ||||||| ||||||     
T  3187957 ttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatccaaaaaggtctaacggtgcagcttattgctca 3187858  T
Q  234 cttgccttcta 244  Q
    ||||| |||||    
T  3187857 cttgcattcta 3187847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 38 - 244
Target Start/End: Complemental strand, 24125109 - 24124905
Alignment:
Q  38 tctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcat 137  Q
    |||||||||||||||  ||||||||| ||| ||||||||||| |||  ||||| |||||||||||||||||| ||||||||||| |||||||| ||||||    
T  24125109 tctgacaatcaacat--gcttttataccatttgcttttgacaattttgatttcctagcaccagaggttgttggccttctacataaagttcaaaaggtcat 24125012  T
Q  138 gcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttg 237  Q
    |||||||||||||||||||| |||||  |||||||||||| || | | |||| ||||| ||||||  | | || | |||||||||||| ||   ||||||    
T  24125011 gcatagcaatgtcatgtctcataggtccatgaatgttgtgtttacaaggattagttttgccatccgtaaaagcttggcggcgcagcttttttgccgcttg 24124912  T
Q  238 ccttcta 244  Q
    |||||||    
T  24124911 ccttcta 24124905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 18804647 - 18804490
Alignment:
Q  86 atttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgat 185  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||| |||||||||| | || |||| || || |||     
T  18804647 atttcctagcaccagaggctgttgaccttctacatagatttcaaaaggtcatgcataacaatgtcatgactcctaggttca-gagtgttttgtttacgag 18804549  T
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||  ||||||||||||    
T  18804548 gattggttttgccatccaaaaaggtctagcggcgcagcttgttgcctgcttgccttcta 18804490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 6592660 - 6592472
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| |||||||||||  | ||||| | ||| ||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||| ||    
T  6592660 gtgttctcacaatcaacat--gattttaaaccatttgcttttgacactttcagtttcctagctccagaggttgttgaccttctgcatagagttcaaaagg 6592563  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagctt 225  Q
    |||||||||  ||||||||||||| |||||| |||||||||||| || |||  |||||||||  |||||| | ||| |||||||| ||||||    
T  6592562 tcatgcata-taatgtcatgtctcataggttcatgaatgttgtgtttacgagtattggttttgtcatccagaaaggtctagcggcacagctt 6592472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 37514273 - 37514101
Alignment:
Q  69 tgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatg 168  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||||| |||||  |||    
T  37514273 tgcttttgacactttcaatttcctagcgccagaggctgttgaccttctacatagagttcaaaaggtcatgcatatcaatgttacgtctcttaggtccatg 37514174  T
Q  169 aatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcctt 241  Q
    ||||||||  |  ||| ||||| | || ||| ||||| ||| ||| |||||||||||||||| ||||||||||    
T  37514173 aatgttgtattcacgaggattgatcttgccacccaaaaaggtctaacggcgcagcttgttgcccgcttgcctt 37514101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 34 - 231
Target Start/End: Complemental strand, 39434752 - 39434557
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| || ||||||||||||  | ||| ||||| ||||||   |||| |||||||||||||| |||||||    
T  39434752 gtgttctgacaatcaacat--gcttttataccatttgtttttgacacttttgacttcctagcatcagaggcatttgatcttctacatagagtccaaaggg 39434655  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgct 231  Q
    | ||||||| |||||| ||||||| ||| |  |||||||||||| || ||| ||||| |||| ||||||||| ||| |||||||||||||||||||||    
T  39434654 ttatgcatatcaatgtaatgtctcttagatccatgaatgttgtgtttacgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgct 39434557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 35740010 - 35740148
Alignment:
Q  36 gttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtc 135  Q
    ||||||||||||||||| |  |||||||  ||  |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||  |||    
T  35740010 gttctgacaatcaacatgt--ttttatacaattagcttttgacactttcagtttcctagcaccagagattgttgaccttctacatagagttcaaaaagtc 35740107  T
Q  136 atgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||||||| |||||||||||| ||||||||| | ||||||||    
T  35740108 atgcataacaatgtcatgtcccctaggtttgtaaatgttgt 35740148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 3821249 - 3821171
Alignment:
Q  96 accagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgtt 174  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  3821249 accagaggttgttgaccttctacatagagttcaaagggtaatgcatagcaatgtcatgtctcctaggttcataaatgtt 3821171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 6618369 - 6618178
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| |||||||||||  | ||||| | ||| ||||||||||||||||| |||| |||| |||||| ||||||||||| | ||||| ||||||| ||    
T  6618369 gtgttctcacaatcaacat--gattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcatagcgttcaaaagg 6618272  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    |||||||||  ||||||||||||| |||||  ||||||||| || || |||  |||||||||  |||||||| ||  ||| |||| |||||||||    
T  6618271 tcatgcata-taatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtcatccaaaaagatctaacggcacagcttgtt 6618178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 25021836 - 25022044
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| ||||||||||| |  ||||||| ||| | ||||||||| |||    ||| ||||||||||||||||||||| || ||| | |||||||||||    
T  25021836 gtgttctcacaatcaacatgt--ttttataccattttcttttgacatttttggcttcctagcaccagaggttgttgaccatccacacaaagttcaaaggg 25021933  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||| | ||||||||| ||||||||||  | |||||||||| || | ||||||| ||||| |||||||| |   |||||| || ||||||||| | |    
T  25021934 tcatgcacaacaatgtcatatctcctaggtccaggaatgttgtgtttacaatgattgattttatcatccaaaaaattctagcgacgtagcttgttgtttg 25022033  T
Q  234 cttgccttcta 244  Q
     ||||||||||    
T  25022034 tttgccttcta 25022044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 4699899 - 4699762
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattgg 191  Q
    |||||||||||| ||||||||||||| ||| |||||||||| ||||| |||||||| | ||||| |||||||  |||||||||||| || | | |||| |    
T  4699899 tagcaccagaggctgttgaccttctatataaagttcaaagg-tcatgaatagcaatattatgtcacctaggtccatgaatgttgtgtttacaaggattag 4699801  T
Q  192 ttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    |||| ||||||||| |||| ||| |||||||||||||||    
T  4699800 ttttgccatccaaaaaggcttagtggcgcagcttgttgc 4699762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 65 - 230
Target Start/End: Original strand, 8540428 - 8540596
Alignment:
Q  65 catctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatag---agttcaaagggtcatgcatagcaatgtcatgtctcctag 161  Q
    ||||||| |||||||||||||| ||  || || |||||||||||||| |||||||||    ||||||||||||||||| || ||||||||||| | |||     
T  8540428 catctgcatttgacactttcaactttctaacatcagaggttgttgactttctacataataaagttcaaagggtcatgcttaacaatgtcatgttttctat 8540527  T
Q  162 gtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
     || || ||||||||| || ||||||||| ||||| |||||||| || | |||| || || ||||||||    
T  8540528 tttcataaatgttgtgtttacgatgattgattttatcatccaaaaagacgtagcagcacaacttgttgc 8540596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 40223476 - 40223541
Alignment:
Q  87 tttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  40223476 tttcctagcaccggaggttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcat 40223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 3863342 - 3863262
Alignment:
Q  96 accagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| | ||||| || ||||||| ||||    
T  3863342 accagaggttattgaccttctacatagagttcaaagggtagtgcatagcaatgtcatctttcctaagtctatgaatattgt 3863262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 28196256 - 28196152
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| || ||||||||||||    ||| |||||||| |||||||||||| ||||| ||||||||||||| ||||||| | |||||||||||||    
T  28196256 ttttataccatttgtttttgacacttttgtcttcctagcaccataggttgttgaccatctacgtagagttcaaaggatcatgcacaacaatgtcatgtct 28196157  T
Q  157 cctag 161  Q
    |||||    
T  28196156 cctag 28196152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 242
Target Start/End: Complemental strand, 4073559 - 4073413
Alignment:
Q  96 accagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    |||||||||||||||||||||||| |||  |||| | |||||||||||||||||||||| ||| || |   ||||||||||| || |||  |||| ||||    
T  4073559 accagaggttgttgaccttctacagagaaatcaatgagtcatgcatagcaatgtcatgtttccaagatccgtgaatgttgtgtttacgagaattgatttt 4073460  T
Q  196 accatccaaataggcctagcggcgcagcttgttgctcgcttgccttc 242  Q
    | |||||||| | || ||||| | || |||||| | |||||||||||    
T  4073459 atcatccaaaaaagcttagcgacacaacttgtttcccgcttgccttc 4073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 9259377 - 9259483
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttacc 198  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||| | ||||| ||  |||||||||||  || ||| ||||| ||||  |    
T  9259377 agaggttgttgaccttctacatagagttcacagactcatgcatagcaatgtcatatatcctaagtccatgaatgttgtatttacgaagattgattttgtc 9259476  T
Q  199 atccaaa 205  Q
    |||||||    
T  9259477 atccaaa 9259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 500312 - 500199
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| | ||||||||| ||||  |||| ||| |  |||||| |||| |||||||||||||||||||| ||    
T  500312 gtgttctgacaatcaacat--gcttttataccatttacttttgacattttcggtttcctagtatgagaggt-gttggccttctacatagagttcaaaagg 500216  T
Q  134 tcatgcatagcaatgtc 150  Q
    ||||||||| |||||||    
T  500215 tcatgcatatcaatgtc 500199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 8115834 - 8115779
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgt 154  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  8115834 agaggttgttgaccttctacataaagttcaaaggatcatgcattgcaatgtcatgt 8115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 57 - 244
Target Start/End: Complemental strand, 43824053 - 43823866
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| |||||||||||||||    ||| | |||  ||||| | ||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  43824053 ttttataccatttgcttttgacacttttggcttccttgcattagaggctattgacctttcacatagagttcaaatggtcatgcatagcaatgtcatgtct 43823954  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    || || |  || ||||||||| || ||   ||||| |||  |||| ||| ||||||||  ||||| ||| |||| | |||||||||||    
T  43823953 ccgagatccattaatgttgtgtttacggcaattgggtttgtcatctaaaaaggcctagttgcgcaactttttgccctcttgccttcta 43823866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 39671250 - 39671332
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgtt 174  Q
    ||||||||||||||||| ||||| ||| ||||||| ||||||||||| |||  ||||||||||||||||| |  |||||||||    
T  39671250 tagcaccagaggttgttaaccttttacgtagagttaaaagggtcatgaataaaaatgtcatgtctcctagatccatgaatgtt 39671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 5329687 - 5329765
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||| ||||||||||||| ||| ||||||||||||||||| | | |||| |||||||||||| || ||| |||||||||    
T  5329687 agagattgttgaccttctgcattgagttcaaagggtcatggacaacaatatcatgtctcctatgtctatcaatgttgtg 5329765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 3825660 - 3825567
Alignment:
Q  96 accagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgatt 189  Q
    |||| ||||||||||||||||||| ||| ||||||| || ||||||||||| ||||||| || ||| |  |||||| ||||| || ||||||||    
T  3825660 accataggttgttgaccttctacacagaattcaaagagtaatgcatagcaacgtcatgtttcatagatccatgaatattgtgtttacgatgatt 3825567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 24451105 - 24451037
Alignment:
Q  136 atgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |  |||||||| ||||| |||||||||    
T  24451105 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacgatgatt-gttttgccatccaaa 24451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 4066829 - 4066761
Alignment:
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||||||| |||| ||||||||  |||| ||||||| |  ||||||||||||||||||||||||    
T  4066829 tgcatagcaatgtaatgtgtcctaggtccatgactgttgtgttcacgatgattggttttaccatccaaa 4066761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 12598162 - 12598212
Alignment:
Q  113 ttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggt 163  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  12598162 ttctacaaagagttcaaagggtcatgcatagcaacgttgtgtctcctaggt 12598212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 8882412 - 8882319
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaa 130  Q
    ||||||||||||||||  |||||||||| | ||| || |||||| ||||||| |||  ||||||||||||||||||| | |  ||||||||||||||    
T  8882412 gtgttctgacaatcaa--tatgcttttaaaccatttgtttttga-actttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 8882319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 10950739 - 10950790
Alignment:
Q  103 gttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgt 154  Q
    ||||||||||||||||||| ||||||||||||||   ||| |||||||||||    
T  10950739 gttgttgaccttctacataaagttcaaagggtcacatataacaatgtcatgt 10950790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 10958744 - 10958795
Alignment:
Q  103 gttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgt 154  Q
    ||||||||||||||||||| ||||||||||||||   ||| |||||||||||    
T  10958744 gttgttgaccttctacataaagttcaaagggtcacatataacaatgtcatgt 10958795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 42659230 - 42659171
Alignment:
Q  118 catagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    ||||||||  ||||||| |||||||||||| | |||||| ||||||| ||||||||||||    
T  42659230 catagagtctaaagggttatgcatagcaatattatgtcttctaggttcatgaatgttgtg 42659171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 121776 - 121862
Alignment:
Q  69 tgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtc 155  Q
    ||||||||| ||||| || ||| ||||  ||||| |||||||| ||||||| | |||| ||| | ||||||||| ||||||||||||    
T  121776 tgcttttgaaacttttaacttcctagcctcagagattgttgacattctacacaaagtttaaaagatcatgcatatcaatgtcatgtc 121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 500197 - 500119
Alignment:
Q  166 atgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||||| || ||| ||||| ||||||||| |||| |||| |  |||| |||||| |||| |||||||||||||    
T  500197 atgaatgttgtgtttacgaggattgattttaccattcaaaaaggcttgacggcacagcttattgcccgcttgccttcta 500119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 18596771 - 18596829
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| |||||| || ||| |||||||||||||||||||   ||||||||||||    
T  18596771 gattggttttgccatccgaaaaggtctagcggcgcagcttgttgtcagcttgccttcta 18596829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 8882320 - 8882235
Alignment:
Q  145 aatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    |||||||||||||||||||  |||||||||||| || ||| ||||  |||| ||||| ||| | |  || ||||||||||||||||    
T  8882320 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattaattttgccatcaaaaaatgtttaacggcgcagcttgttgc 8882235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 44337272 - 44337221
Alignment:
Q  188 ttggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||||||| ||||||||| ||| | |||||| |||||||||||||||||||||    
T  44337272 ttggttttgccatccaaaaaggtccagcggc-cagcttgttgctcgcttgcct 44337221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 4e-58; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 19277378 - 19277168
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  19277378 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaagg 19277281  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg--cttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgct 231  Q
    ||||||||||||||||||||||||||||||  ||||||||||||  |   |||  ||||||||| ||||||||| ||| ||||||||||||||| ||||     
T  19277280 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacacgaaaattggttttgccatccaaaaaggtctagcggcgcagcttattgcc 19277181  T
Q  232 cgcttgccttcta 244  Q
    ||| |||||||||    
T  19277180 cgcctgccttcta 19277168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 21326860 - 21327068
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||    
T  21326860 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcgatttcctagcaccagaggctgttgaccttttacatagagttcaaaagg 21326957  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||||||||| |||||||||||||  |||||||||||| |  ||| ||||| |||| ||||||||| ||| ||| |||||||||||||||   |    
T  21326958 tcatgcatagcaatgttatgtctcctaggtccatgaatgttgtgttcacgaggattgattttgccatccaaaaaggtctaacggcgcagcttgttgtctg 21327057  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  21327058 cttgccttcta 21327068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 24527674 - 24527482
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||| |||| |||||| |||||  ||||||||||||||||||||||||| ||    
T  24527674 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcagtttcctagcacgagaggcggttgaccttctacatagagttcaaaagg 24527577  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    ||||||||||||||||||| |||||| |||  |||||||||||  |  ||| ||||||||||  |||||||| ||  ||||||||||||||||||    
T  24527576 tcatgcatagcaatgtcatttctccttggtccatgaatgttgtattcacgaggattggttttgtcatccaaaaagatctagcggcgcagcttgtt 24527482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 983034 - 982826
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||| ||||||  |||  |||||||||||||||||| |||||||||||||||||||| ||    
T  983034 gtgttctgacaatcaacat--gcttttataccatttgcttttgatactttcggttttctagcaccagaggttgttggccttctacatagagttcaaaagg 982937  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| ||||||||||||| ||| ||  |||||||||||| |  ||| ||||||| || ||||||||| ||| |||||| | |||||||||||  |    
T  982936 tcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgttcacgaggattggtattgccatccaaaaaggtctagcgacacagcttgttgcctg 982837  T
Q  234 cttgccttcta 244  Q
     ||||||||||    
T  982836 tttgccttcta 982826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 45613864 - 45614072
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| || |||||||||||||  ||||  ||||||||||| ||||  |||||||||||||||||||| |     
T  45613864 gtgttctgacaatcaacatgt--ttttataccatttgattttgacactttcggtttccaagcaccagaggctgttagccttctacatagagttcaaaagt 45613961  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| ||||||||  ||||||||||  |||||||||||| || ||| |||||||||| |||||| || ||| |||||||||||||||||||  ||    
T  45613962 tcatgcataacaatgtcaaatctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtccg 45614061  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  45614062 cttgccttcta 45614072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 4501343 - 4501139
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  |||||||||  || |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||| |     
T  4501343 gtgttctgacaatcaacat--gcttttatataatttgcttttgacactttggttttc-tagcaccagaggttgttgaccttctacatagagttcaaaagt 4501247  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||||||||||||||||||||| || |||||||||||| || ||| |||| | |||  |||| ||| ||| ||||| ||||| ||| |||  ||    
T  4501246 tcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgtttacgaggattagctttgtcatctaaaaaggtctagcagcgcatcttattgtccg 4501147  T
Q  234 cttgcctt 241  Q
    ||||||||    
T  4501146 cttgcctt 4501139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 39 - 205
Target Start/End: Complemental strand, 48539261 - 48539097
Alignment:
Q  39 ctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatg 138  Q
    ||||||||||||||  ||||||||| ||| ||||||||||||||||  |||  |||||||||||| |||||| | |||||||||||| |||| |||||||    
T  48539261 ctgacaatcaacat--gcttttataccatttgcttttgacactttcggttttctagcaccagaggctgttgatcgtctacatagagtccaaaaggtcatg 48539164  T
Q  139 catagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||||||||||||||||||||||  |||||||||||| || ||| |||||||||| |||||||||    
T  48539163 catagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaa 48539097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 25187016 - 25187161
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttacc 198  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||| |  | ||||||| |||||||    
T  25187016 agaggttgttgaccttctatatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatgaatgttgtgttcccaatgattgattttacc 25187115  T
Q  199 atccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||| ||| ||  |||||||||||||||||||| |||||||||||||    
T  25187116 atctaaaaagatctagcggcgcagcttgttgcccgcttgccttcta 25187161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 5825363 - 5825166
Alignment:
Q  29 aatgggtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttca 128  Q
    |||| ||||| ||||||||||||| |  ||||||| ||| | ||||||||||||||    || ||||||||||||||||||||||||||||||||||  |    
T  5825363 aatgcgtgttatgacaatcaacatgt--ttttataccatttacttttgacactttcggcatcctagcaccagaggttgttgaccttctacatagagtcga 5825266  T
Q  129 aagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    |||||| |||||||||||||| ||||||||||||| |||| |||||||| || ||| |||||||||| ||||| ||| ||| ||  ||||||||||||||    
T  5825265 aagggttatgcatagcaatgttatgtctcctaggtctatggatgttgtgtttacgaggattggttttgccatcgaaaaaggtcttacggcgcagcttgtt 5825166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 27521556 - 27521391
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  || ||||||  || | |||||||||||||   |||| ||||| ||||||||||||||||||||||||||||||||| ||    
T  27521556 gtgttctgacaatcaacat--gcatttatacaatttacttttgacacttttggtttcctagcatcagaggttgttgaccttctacatagagttcaaaagg 27521459  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatc 201  Q
    ||||||||| ||||||||||||||||| || ||||||||||||| || ||| ||||| |||| |||||    
T  27521458 tcatgcataacaatgtcatgtctcctaagtctatgaatgttgtgtttacgaggattgattttgccatc 27521391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 32584686 - 32584477
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttc-aaagg 132  Q
    |||||||||||||||| ||  ||||||| | ||| |||||||||||||||   |||| |||||||||||||||||||||||||| ||||||||| ||| |    
T  32584686 gtgttctgacaatcaagat--gcttttacaccatttgcttttgacactttatgtttcctagcaccagaggttgttgaccttctagatagagttccaaaag 32584589  T
Q  133 gtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctc 232  Q
     ||||||||| |||||| ||||||| ||| |  |||||||||||| || | | ||||| |||||||||||||| ||||||||| ||||| ||||| || |    
T  32584588 atcatgcatatcaatgttatgtctcatagatcgatgaatgttgtgtttacaaagattgattttaccatccaaaaaggcctagcagcgcaacttgtcgccc 32584489  T
Q  233 gcttgccttcta 244  Q
    |||||| |||||    
T  32584488 gcttgctttcta 32584477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 57 - 244
Target Start/End: Complemental strand, 22198050 - 22197864
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| |||||||| |||||||  |||| ||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  22198050 ttttataccatttgcttttgtcactttcggtttcctagcatcagaggttgttgaccttctacatagagttcaaaaggttatg-atagcaacgtcatgtct 22197952  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||  |||||||||||| || |||| |||| ||||  |||||||| |||| | |||| ||| |||||||| |||||| ||||||    
T  22197951 cctaggtcaatgaatgttgtgtttacgataattgattttgtcatccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttcta 22197864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 57 - 244
Target Start/End: Original strand, 22239771 - 22239957
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| |||||||| |||||||  |||| ||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  22239771 ttttataccatttgcttttgtcactttcggtttcctagcatcagaggttgttgaccttctacatagagttcaaaaggttatg-atagcaacgtcatgtct 22239869  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||  |||||||||||| || |||| |||| ||||  |||||||| |||| | |||| ||| |||||||| |||||| ||||||    
T  22239870 cctaggtcaatgaatgttgtgtttacgataattgattttgtcatccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttcta 22239957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 40726502 - 40726706
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| || |||||||||||||   ||| ||||| |||||||||||||||||||||||||||| |||||||    
T  40726502 gtgttctgacaatcaacatgt--ttttataccatttgtttttgacactttcggcttcatagcatcagaggttgttgaccttctacatagagtccaaaggg 40726599  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | ||||||| |||||  ||||||||||| |  |||||||||||| ||  || ||||| |||| ||||||||| | | ||| |  ||||||||||||| ||    
T  40726600 ttatgcataacaatgctatgtctcctagatccatgaatgttgtgtttatgaggattgattttgccatccaaaaatgtctaacatcgcagcttgttgcccg 40726699  T
Q  234 cttgcct 240  Q
    |||||||    
T  40726700 cttgcct 40726706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 30216080 - 30216221
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| ||||||||||||| |  ||||||| ||| ||||||||||||||||  |||| ||||| ||||| ||||||| |||| ||||| |||||||| ||    
T  30216080 gtgttttgacaatcaacatgt--ttttataccatttgcttttgacactttcggtttcctagcatcagagtttgttgatcttccacataaagttcaaatgg 30216177  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  30216178 tcatgcatagcaatgtcatatctcctaggtctatgaatgttgtg 30216221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 28517316 - 28517503
Alignment:
Q  41 gacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgca 140  Q
    |||||||||||| |  ||||||| ||| |||||||||||||||  | ||| ||||| |||||   |||||||||||||||||||| |||||||| |||||    
T  28517316 gacaatcaacatgt--ttttataccatttgcttttgacacttttgacttcctagcatcagagacagttgaccttctacatagagtccaaagggttatgca 28517413  T
Q  141 tagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    || |||||| |||||||||| ||  |||||||||||| || ||| |||||||||| ||||||||| | | |||||| | |||||||||||    
T  28517414 taacaatgttatgtctcctaagtccatgaatgttgtgtttacgaggattggttttgccatccaaaaaagtctagcgacacagcttgttgc 28517503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 10905202 - 10905011
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||| |||||||  ||||| ||| ||| |||||||||||||||   || | |||||||||||  ||||||||||||||||||||||||||| |    
T  10905202 gtgttctgacactcaacat--gcttt-ataccatttgcttttgacacttttggttgcctagcaccagagtatgttgaccttctacatagagttcaaagag 10905106  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
     |||||||| ||||||||||||||||||||  |||||||| ||| || | | ||||| | | |||||||||| || |||||  ||||||||||||    
T  10905105 ccatgcataacaatgtcatgtctcctaggtccatgaatgtcgtgtttacaaggattgatctgaccatccaaaaagacctagtagcgcagcttgtt 10905011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 43856959 - 43856821
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| |||||||||||||  || ||||||  || ||||||||||| |||   |||| || |||||||||||||||||||||||||||||||||||||||    
T  43856959 gtgttttgacaatcaacat--gcgtttatacaatttgcttttgacatttttggtttcctaacaccagaggttgttgaccttctacatagagttcaaaggg 43856862  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgtt 174  Q
    ||||||| | |||||||||| |||||||||  |||||||||    
T  43856861 tcatgcacaacaatgtcatgactcctaggtccatgaatgtt 43856821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 59 - 205
Target Start/End: Original strand, 5972261 - 5972407
Alignment:
Q  59 ttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcc 158  Q
    ||||| ||| || |||||||| ||||| |||  ||| | |||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||    
T  5972261 ttataccatttgtttttgacattttcatttttctagtatcagaggttgttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcc 5972360  T
Q  159 taggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
     || | ||||||||||||| || ||| |||| ||||| |||||||||    
T  5972361 cagatctatgaatgttgtgtttacgaggattagttttgccatccaaa 5972407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 205
Target Start/End: Complemental strand, 34772851 - 34772698
Alignment:
Q  51 atatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtc 150  Q
    ||||| ||||||| ||| ||||||||| |||||||||||| ||| |  ||||||||||||||||||||||| | ||||||  |||||||||| |||||||    
T  34772851 atatgtttttataccatttgcttttgaaactttcaatttcttag-attagaggttgttgaccttctacataaacttcaaaaagtcatgcatatcaatgtc 34772753  T
Q  151 atgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||| | ||||||  |||||| ||||| || |||| ||||||||| |||| ||||    
T  34772752 atgttttctaggtccatgaatattgtgtttacgataattggttttgccattcaaa 34772698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 41117833 - 41117987
Alignment:
Q  77 acactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||||||||  |||| || ||||||| |||||| ||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||  |||||||||||    
T  41117833 acactttcggtttcctaacaccagatgttgttaaccttctacatagagtttaaaagatcatgcatagcaatgtcatgtttcctaggtccatgaatgttgt 41117932  T
Q  177 gcttgcgatgattggttttaccatccaaataggcctagcggcgca-gcttgttgc 230  Q
    | |  ||||||||| |||| | ||||||| | | | ||||||||| |||||||||    
T  41117933 gttcacgatgattgattttgctatccaaaaaagtccagcggcgcaggcttgttgc 41117987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 42295209 - 42295365
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    |||||||||||||||| |  ||||||| ||| || |||| | ||||||  |||| || |||||| ||||||||||||||||||||| |||||||   |||    
T  42295209 ttctgacaatcaacatgt--ttttataccatttgttttttatactttcggtttcctaacaccaggggttgttgaccttctacatagcgttcaaaatatca 42295306  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    |||||| || |||||||||||||||||  |||||| ||||| || |||||||| |||||    
T  42295307 tgcataacattgtcatgtctcctaggtccatgaatcttgtgtttacgatgattagtttt 42295365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 23037594 - 23037465
Alignment:
Q  71 cttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaa 170  Q
    ||||||||||||| |||||| || |  ||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| |||| ||||| ||||||    
T  23037594 cttttgacacttttaatttc-taacgtcagaggttgttgaccatctacgtagggttcaaagggttatgcatagcaatgtcatttctcttaggtctatgaa 23037496  T
Q  171 tgttgtgcttgcgatgattggttttaccatc 201  Q
    | ||||| || ||| ||||| |||| |||||    
T  23037495 ttttgtgtttacgaggattgattttgccatc 23037465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 23793060 - 23792956
Alignment:
Q  73 tttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatg 172  Q
    |||||||||||   |||| |||||||| ||||||||||||||||| ||| |||||||||| |||| ||||| ||||| ||||||||||||| ||| |||     
T  23793060 tttgacacttttgttttcttagcaccacaggttgttgaccttctaaatacagttcaaaggatcatacatagtaatgtaatgtctcctaggtctataaatc 23792961  T
Q  173 ttgtg 177  Q
    |||||    
T  23792960 ttgtg 23792956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 43333941 - 43334046
Alignment:
Q  125 ttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagct 224  Q
    |||||| ||||||||||| ||||| |||||||||||| | ||||||||||| | ||  ||||||||||||| |||| |||| || | | |||||||||||    
T  43333941 ttcaaaaggtcatgcatatcaatgacatgtctcctagatctatgaatgttgagtttatgatgattggttttgccattcaaaaagacttggcggcgcagct 43334040  T
Q  225 tgttgc 230  Q
    ||||||    
T  43334041 tgttgc 43334046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 45003010 - 45003123
Alignment:
Q  127 caaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttg 226  Q
    ||||| || |||||||||||||| ||||||| ||||   |||||||||||| || ||| ||||| |||| ||||||||| ||| |||||||||||||||     
T  45003010 caaagagttatgcatagcaatgttatgtctcataggaccatgaatgttgtgtttacgaagattgattttgccatccaaaaaggtctagcggcgcagctta 45003109  T
Q  227 ttgctcgcttgcct 240  Q
    |||  |||||||||    
T  45003110 ttgtccgcttgcct 45003123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 6634993 - 6635110
Alignment:
Q  42 acaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcat 141  Q
    |||||||||||||  ||||||| ||| ||||||||||| |||| ||||  ||||| ||||||||||||||||||||| || | || |||   || |||||    
T  6634993 acaatcaacatat--ttttatatcatttgcttttgacagtttcgattttttagcatcagaggttgttgaccttctacgtaaaattaaaataatcttgcat 6635090  T
Q  142 agcaatgtcatgtctcctag 161  Q
    | ||||||||||||||||||    
T  6635091 aacaatgtcatgtctcctag 6635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 9281209 - 9281255
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatg 138  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  9281209 tagcaccagatgttgttgaccttctacatagagttcaaagggtcatg 9281255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 9292180 - 9292226
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatg 138  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  9292180 tagcaccagatgttgttgaccttctacatagagttcaaagggtcatg 9292226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 10032193 - 10032299
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||  |||| |||||||  || ||||||||| | |||||  ||| |||||  ||| |||||| |||||||||||||||||||||||     
T  10032193 gtgttctgacaatcaa--tatgtttttatactatttgcttttgatattttcagcttcttagcattagatgttgttaaccttctacatagagttcaaagga 10032290  T
Q  134 tcatgcata 142  Q
    |||||||||    
T  10032291 tcatgcata 10032299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 27027758 - 27027860
Alignment:
Q  142 agcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcctt 241  Q
    ||||||||||||||||||||||  |||||||||||| |  ||| |||||||||| | ||||||| ||  ||||||| | |||||||| | | ||||||||    
T  27027758 agcaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgctatccaaaaagatctagcggtgtagcttgttacccacttgcctt 27027857  T
Q  242 cta 244  Q
    |||    
T  27027858 cta 27027860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 29054816 - 29054729
Alignment:
Q  154 tctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcctt 241  Q
    |||||||||| ||||||||| ||  ||  || |||||||||| ||||||| | |||  |||||||||||||| |||||||||||||||    
T  29054816 tctcctaggtctatgaatgtagtttttaagaggattggttttgccatccataaaggattagcggcgcagcttattgctcgcttgcctt 29054729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 23890257 - 23890307
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcata 142  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| ||||    
T  23890257 tagcaccagaggttgttgacctcttacatagagttcaaaggatcatacata 23890307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 38766258 - 38766205
Alignment:
Q  187 attggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    ||||||||| ||||||||| ||| ||||| |||||||||||||| |||||||||    
T  38766258 attggttttgccatccaaaaaggtctagctgcgcagcttgttgcccgcttgcct 38766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 44526001 - 44525929
Alignment:
Q  105 tgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||||||||||||||| ||||||||| |   ||||||| |||||||||||||||||  |  ||||||||||||    
T  44526001 tgttgaccttctacatggagttcaaaagaatatgcataacaatgtcatgtctcctatatccatgaatgttgtg 44525929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 38839313 - 38839242
Alignment:
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||| ||||||||||| |   ||||  |||||||||||| || ||| ||||||||||||||||||||    
T  38839313 tcatgcataacaatgtcatgtttatcaggtccatgaatgttgtgtttacgaagattggttttaccatccaaa 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 2904394 - 2904348
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatg 138  Q
    |||||| |||||||||||||||||||| || |||| |||||||||||    
T  2904394 tagcactagaggttgttgaccttctacgtaaagtttaaagggtcatg 2904348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 38832225 - 38832183
Alignment:
Q  198 catccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||||||| ||| |||||||||||||||||||| |||||||||    
T  38832225 catccaaaaaggtctagcggcgcagcttgttgcccgcttgcct 38832183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 2904353 - 2904296
Alignment:
Q  148 gtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||| ||||||||| ||||||||||||| || |||| ||||||||| | |||||||    
T  2904353 gtcatgactcctaggtctatgaatgttgtgtttacgataattggttttgctatccaaa 2904296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 21454678 - 21454650
Alignment:
Q  213 agcggcgcagcttgttgctcgcttgcctt 241  Q
    |||||||||||||||||||||||||||||    
T  21454678 agcggcgcagcttgttgctcgcttgcctt 21454650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 38 - 244
Target Start/End: Complemental strand, 103187 - 102983
Alignment:
Q  38 tctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcat 137  Q
    |||||||||||||||  ||||||||| ||| ||||||||||||||||  |||| |||||||||||| |||||||||||||||| ||| ||||| ||||||    
T  103187 tctgacaatcaacat--gcttttataccatttgcttttgacactttcggtttcctagcaccagaggctgttgaccttctacatcgagctcaaaaggtcat 103090  T
Q  138 gcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttg 237  Q
    ||||| ||||||| ||||||||||||  |||||||||||| || ||| |||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||    
T  103089 gcataacaatgtcgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcggcgcaacttgttgcccgcttg 102990  T
Q  238 ccttcta 244  Q
    |||||||    
T  102989 ccttcta 102983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 4413088 - 4413296
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||  |||| ||||||||||| ||||||||||||||||||| ||||||| ||    
T  4413088 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcggtttcctagcaccagagattgttgaccttctacatagggttcaaaagg 4413185  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| |   || ||||| |||| ||||||||| ||| |||||||||||||||||||| |     
T  4413186 tcatgcatagcaaagtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgccca 4413285  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  4413286 cttgccttcta 4413296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 53 - 244
Target Start/End: Complemental strand, 17344706 - 17344515
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||||||||| ||| ||||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  17344706 atgcttttataccatttgcttttgacactttcagtttcctagcaccataggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcat 17344607  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||||  |||||||||||| || ||| ||||| |||| | ||||||| ||| ||| ||||||||||||||||  ||||||||||||    
T  17344606 gtctcctaggtccatgaatgttgtgtttacgaggattgatttttcgatccaaaaaggtctatcggcgcagcttgttgccggcttgccttcta 17344515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 18744976 - 18745184
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||||  |||||||| ||| ||||||||||| |||| ||||  |||||||| ||| ||||| |||||||||||||||||||| |     
T  18744976 gtgttctgacaatcaacata--cttttataccatttgcttttgacattttcgattttctagcaccataggctgttggccttctacatagagttcaaaaga 18745073  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||   | |||||||||| ||||||||| ||| ||||||||||||||| |||||||    
T  18745074 tcatgcatagcaatgtcatatttcctaggtctatgaatgttgtgtttataaggattggttttgccatccaaaaaggtctagcggcgcagcttattgctcg 18745173  T
Q  234 cttgccttcta 244  Q
    |||| ||||||    
T  18745174 cttgtcttcta 18745184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 41867931 - 41868137
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||||| |||    
T  41867931 tgttctgacaatcaacat--gcttttataccatttgcttttgacactttcgggttcctagcaccagaggctgttgaccttctacatagagttcaaaaggt 41868028  T
Q  135 catgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgc 234  Q
    |||||||| ||||||||||||||| ||||  |||||||||||| || ||| |||||||||| ||| ||||| ||  ||||||||||| |||||||| |||    
T  41868029 catgcataacaatgtcatgtctcccaggtccatgaatgttgtgtttacgaggattggttttgcca-ccaaaaagatctagcggcgcaacttgttgcccgc 41868127  T
Q  235 ttgccttcta 244  Q
    |||| |||||    
T  41868128 ttgctttcta 41868137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 9685437 - 9685642
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||  ||||  |||||| ||||| ||| ||||||||| |||||||||||| ||    
T  9685437 gtgttctgacaatcaacat--gcttttataccatttgcttttgacacttttgattttctagcactagaggctgtggaccttctatatagagttcaaaagg 9685534  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||| ||||||||||||||||||||||||  |||||||||||| |  | | ||||| |||| ||||||||| ||| |||||||||||||||||||| ||    
T  9685535 tcatggatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacaaagattgtttttgccatccaaaaaggtctagcggcgcagcttgttgcccg 9685634  T
Q  234 cttgcctt 241  Q
    ||||||||    
T  9685635 cttgcctt 9685642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 37 - 237
Target Start/End: Complemental strand, 28225082 - 28224884
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||||||||||||  ||||||||| ||| ||||||||||||||||   ||| ||||  |||||||||||||||||||||||||||| |||||| | |    
T  28225082 ttctgacaatcaacat--gcttttataccatttgcttttgacactttcggcttcctagcttcagaggttgttgaccttctacatagagtccaaaggatta 28224985  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgctt 236  Q
    |||||  |||| | |||||||||||||  |||||||||||| ||  || |||| ||||| ||||||||| ||| ||||||||||||||| |||| |||||    
T  28224984 tgcatgacaatattatgtctcctaggtcaatgaatgttgtgtttatgaagatttgttttgccatccaaaaaggtctagcggcgcagcttattgcccgctt 28224885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 13413400 - 13413228
Alignment:
Q  72 ttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaat 171  Q
    |||||||||||||  |||   |||| |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||    
T  13413400 ttttgacactttcggttttcaagcagcagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaat 13413301  T
Q  172 gttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||| ||  ||  ||||||||| ||||||||| ||||||| |||| ||||||||||  |||||| ||||||    
T  13413300 gttgtgtttatgagaattggttttgccatccaaaaaggcctaacggctcagcttgttgtccgcttgtcttcta 13413228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 19161805 - 19162013
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| ||||||||||||||||  ||| ||| ||| ||||| || | ||||| ||||||||||||||| ||    
T  19161805 gtgttctgacaatcaacatgt--ttttataccatttgcttttgacactttcggttttgtaacactagaggctgcttaccttttacatagagttcaaaagg 19161902  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| ||||||||||||||||||||  ||||||  |||| || ||| ||||| ||||  |||||||| || | ||| ||||||||||| ||  ||    
T  19161903 tcatgcatatcaatgtcatgtctcctaggtcaatgaatagtgtgttttcgaggattgattttgtcatccaaaaagacgtagtggcgcagcttgctgtccg 19162002  T
Q  234 cttgccttcta 244  Q
    ||||| |||||    
T  19162003 cttgctttcta 19162013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 7760926 - 7761061
Alignment:
Q  95 caccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttt 194  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| || ||| | ||||| ||||||| |||  |||| |||    
T  7760926 caccagaggttgttgaccttctacatagagttcaaaggatcatgcgtagcaatgtgatgtctcataagttcaagaatgatgtgcttacgaaaattgattt 7761025  T
Q  195 taccatccaaataggcctagcggcgcagcttgttgc 230  Q
    |  |||||||| |||| |||||||||| ||| ||||    
T  7761026 tgacatccaaaaaggcttagcggcgcaacttattgc 7761061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 5532504 - 5532314
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| |||||||||||||  |||||||||  || | ||||||||||||| |  ||| |||||||| |||||||||| ||||||||||||||||||||||    
T  5532504 gtgttgtgacaatcaacat--gcttttatactatttacttttgacacttt-agcttcctagcaccataggttgttgagcttctacatagagttcaaaggg 5532408  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    ||||||| | ||||| |||| |||||| ||| ||||||| |||| || | | ||||| ||||  ||||||||  |||||| ||||||| ||||||    
T  5532407 tcatgcacaacaatgccatgactcctaagttcatgaatg-tgtgtttacaaggattgattttctcatccaaaacggcctaacggcgcaacttgtt 5532314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 34814841 - 34814967
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||  |||||||||||| ||| |||||| |||||||||  || | || ||||||||  |||||||||||||||||||||||||| ||    
T  34814841 gtgttctgacaatcaa--tatgcttttataccatttgctttcgacactttcggttcc-taacaccagagactgttgaccttctacatagagttcaaatgg 34814937  T
Q  134 tcatgcatagcaatgtcatgtctcctaggt 163  Q
    ||||||||| |||||| ||||||| |||||    
T  34814938 tcatgcataacaatgttatgtctcttaggt 34814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 20142753 - 20142874
Alignment:
Q  40 tgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgc 139  Q
    |||||||||||||  ||||||||| ||| | |||||||||||||   |||  ||||| || |||||||||||||| ||||||||||||||| |||||| |    
T  20142753 tgacaatcaacat--gcttttataccattttcttttgacacttttggttttctagcatcaaaggttgttgaccttatacatagagttcaaaaggtcatac 20142850  T
Q  140 atagcaatgtcatgtctcctaggt 163  Q
    ||| ||||||||||||||||||||    
T  20142851 ataacaatgtcatgtctcctaggt 20142874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 16351928 - 16352031
Alignment:
Q  98 cagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttac 197  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||  |||||| || || || ||||||||| |||| |    
T  16351928 cagaggttgttgaccttctacatagagttcaaatggtcatgcacaacaatgtcatgtctcttaggtacatgaatattatgtttacgatgattgtttttgc 16352027  T
Q  198 catc 201  Q
    ||||    
T  16352028 catc 16352031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 44686467 - 44686360
Alignment:
Q  70 gcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatga 169  Q
    |||||||||||||||   ||| ||||| ||||| |||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||   |||    
T  44686467 gcttttgacactttcggcttcctagcatcagagtttgttgaccttctacatagattccaaagggttatgcatagcaatgttatgtctcctaggtccgtga 44686368  T
Q  170 atgttgtg 177  Q
    ||||||||    
T  44686367 atgttgtg 44686360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 3825771 - 3825685
Alignment:
Q  76 gacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctagg 162  Q
    ||||||||||||||| ||||| || ||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||| |||||    
T  3825771 gacactttcaatttcctagcatcaaaggttgttgaccttcaacatcgagttcaaagaatcatgcatagcaatgtcatgtcttctagg 3825685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 27502411 - 27502269
Alignment:
Q  72 ttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaat 171  Q
    ||||||||||||| | ||| ||||| || |   ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||| | |||||||    
T  27502411 ttttgacactttcgacttcctagcatcatatactgttgaccttctacatagaatccaaagggttatgcatagcaatatcatgtctcctagatctatgaat 27502312  T
Q  172 gttgtgcttgcgatgattggttttaccatccaaataggcctag 214  Q
    |||||| || ||| ||||| |||| | ||||||| ||| ||||    
T  27502311 gttgtgtttacgaagattgattttgcaatccaaaaaggtctag 27502269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 27494304 - 27494192
Alignment:
Q  128 aaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgt 227  Q
    ||||||| ||| |||||||||| |||||||||| || ||||||| ||||| || |||  ||||||||| ||||||||| ||| ||| |||||||||||||    
T  27494304 aaagggttatgtatagcaatgttatgtctcctaagtctatgaatattgtgtttacgaatattggttttgccatccaaaaaggtctaacggcgcagcttgt 27494205  T
Q  228 tgctcgcttgcct 240  Q
    |||  ||||||||    
T  27494204 tgcctgcttgcct 27494192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 32029103 - 32029228
Alignment:
Q  29 aatgggtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttca 128  Q
    |||| |||||| ||||||||||||  ||||| ||| ||| || ||||||||||||||  |||  | |  |||||| ||||||||||||||||||||||||    
T  32029103 aatgtgtgttcagacaatcaacat--gctttcatatcatttgtttttgacactttcagcttcccaacttcagaggctgttgaccttctacatagagttca 32029200  T
Q  129 aagggtcatgcatagcaatgtcatgtct 156  Q
    ||| ||||| |||| |||||||||||||    
T  32029201 aagagtcatccataacaatgtcatgtct 32029228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 13147119 - 13147262
Alignment:
Q  34 gtgttctgacaatcaacatatgctttt-ataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagg 132  Q
    ||||||||||||||| ||||| ||||| ||| ||| || ||||||||||||   |||  || |||||||| ||||||||||||| |||| ||| ||||||    
T  13147119 gtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttttctaacaccagagattgttgaccttcttcatatagtacaaagg 13147218  T
Q  133 gtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||| |||| | ||||||| ||||| ||| ||| |||||| ||||    
T  13147219 gtcgtgcacaacaatgtcttgtcttctaagttcatgaatattgt 13147262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 8036556 - 8036633
Alignment:
Q  88 ttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgc--atagcaatgtcatgtctcctaggt 163  Q
    |||||| || ||||||||||||||||| ||||||||||||||||| | ||||  ||| ||||||||||||||||||||    
T  8036556 ttcgtaacatcagaggttgttgaccttttacatagagttcaaaggtttatgcatatatcaatgtcatgtctcctaggt 8036633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 3208416 - 3208474
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||| |||||||||||||    
T  3208416 gattggttttgccatccaaaaaggtttagcggcgcagcttgttgcccgcttgccttcta 3208474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 30602424 - 30602366
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||| ||| |||||||||    
T  30602424 gattggttttgccatccaaaaaggcctagcagcgcagcttgttgcccgcatgccttcta 30602366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 41702207 - 41702149
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||| | |||||||||||    
T  41702207 gattggttttgccatccaaaaaggcctagtggcgcagcttgttgcccacttgccttcta 41702149  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 1296175 - 1296268
Alignment:
Q  112 cttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| ||||  || |||||||||| || ||  ||  ||||||||||| |||||||    
T  1296175 cttctacgtagagttcaaagggtcatgcatagtaatatcatgtttcctgtgtctatgaatgttttgtttatgagaattggttttacaatccaaa 1296268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 2886637 - 2886758
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| || |||||| | ||||  ||||  |||| |||||| |||||| ||| ||||||||||||||| |     
T  2886637 gtgttctgacaatcaacatgt--ttttatatcatttgtttttgatattttcggtttccaagcatcagaggctgttgatcttttacatagagttcaaaaga 2886734  T
Q  134 tcatgcatagcaatgtcatgtctc 157  Q
     ||||||||||||| |||| ||||    
T  2886735 gcatgcatagcaatatcatatctc 2886758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 9200281 - 9200205
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatg 168  Q
    |||||||| ||||||||||||||||| |   ||||||||| |||||||||| |||| | ||||||||||||| ||||    
T  9200281 tagcaccaaaggttgttgaccttctaaaactagttcaaagcgtcatgcataacaatattatgtctcctaggtatatg 9200205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 44684955 - 44685021
Alignment:
Q  111 ccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||  || ||  ||||||||||||    
T  44684955 ccttctacatagagttcaaagggtcatgcataacaatattatgtcttataagtccatgaatgttgtg 44685021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 11921232 - 11921330
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||||  ||||||| | | || |||| | |||||||||||  | | | || ||  |||||||||||||||||||||||||||||    
T  11921232 gtgttctgacaatcaacatat--ttttataccgtttgttttttatactttcaattttctggtatcatagactgttgaccttctacatagagttcaaaggg 11921329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 33612628 - 33612713
Alignment:
Q  95 caccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgc 182  Q
    |||| |||||||||||| |||||||  ||||||| ||||||   |||||||||||| |||| |||||||  |||||||||||| ||||    
T  33612628 caccggaggttgttgacattctaca--gagttcagagggtcgctcatagcaatgtcttgtcccctaggtccatgaatgttgtgtttgc 33612713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 23484961 - 23485099
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    ||||||||||||||||||  ||||||||| ||| || ||||||||||| |  |||| |||||||||||    | ||| |  ||||||||||||||| | |    
T  23484961 tgttctgacaatcaacat--gcttttataccatttgtttttgacactt-ctgtttcctagcaccagagacaat-gacttcttacatagagttcaaaagat 23485056  T
Q  135 catgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||||||| |||||  |||||||||||||  ||||| ||||||    
T  23485057 catgcataacaatgctatgtctcctaggtccatgaacgttgtg 23485099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 42122749 - 42122694
Alignment:
Q  189 tggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||| ||||||||| | | ||||||||||||||| ||| ||||||||||||||    
T  42122749 tggttttgccatccaaaaaagtctagcggcgcagcttattgttcgcttgccttcta 42122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 2888601 - 2888480
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| |||  | || |||||||||    ||| || ||| ||||||||||||||||||||| |  |||||||  |    
T  2888601 gtgttctgacaatcaacatgt--ttttataccattcgtttatgacacttttggcttcctaacacaagaggttgttgaccttctacacaaggttcaaaatg 2888504  T
Q  134 tcatgcatagcaatgtcatgtctc 157  Q
    ||||||| | ||||||||| ||||    
T  2888503 tcatgcacaacaatgtcatatctc 2888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 15515286 - 15515378
Alignment:
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttctac 245  Q
    |||||||||||  |  ||||||||| |  ||| |||||||||| ||||||||| | | |||||||||||| |||||||  | |||||||||||    
T  15515286 gtctcctaggtccaccaatgttgtgttcacgaggattggttttgccatccaaaaaagtctagcggcgcagtttgttgcctgtttgccttctac 15515378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 29808139 - 29808023
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| ||||||| ||| | |  ||||| ||||| | ||||||||||||||| ||||||||||| ||  ||||||||| | |||  |||||  |    
T  29808139 ttttataccatttgcttttcacattatttatttcctagcatcggaggttgttgaccttttacatagagtttaagtggtcatgcacaacaacatcatgaat 29808040  T
Q  157 cctaggtttatgaatgt 173  Q
    |||||||  ||||||||    
T  29808039 cctaggtccatgaatgt 29808023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 44720348 - 44720296
Alignment:
Q  95 caccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaat 147  Q
    |||||||||||||| || || |||||| |||||||||| ||||||||| ||||    
T  44720348 caccagaggttgttcactttttacataaagttcaaaggatcatgcataacaat 44720296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 22346980 - 22346772
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  || |||||| | | ||||||||||||||||  |||| ||| | |||||||||||||||||||||| |||||||||| ||    
T  22346980 gtgttctgacaatcaacat--gcgtttataccttttgcttttgacactttcggtttcctagtagcagaggttgttgaccttctacacagagttcaaaagg 22346883  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |  ||| |||| ||||| ||||||||| ||| |||||||||||||||||||  ||    
T  22346882 tcatgcatagaaatgtcatgtctcctaggtttatgaatgttgtgttcacgaggattagttttgccatccaaaaaggtctagcggcgcagcttgttgtccg 22346783  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  22346782 cttgccttcta 22346772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 21473088 - 21472880
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| |||||||||||||| || |||| |||||||||||| |||||||||||||||||||||||||| ||    
T  21473088 gtgttctgacaatcaacatgt--ttttataccatttgcttttgacacttgcagtttcctagcaccagaggctgttgaccttctacatagagttcaaaagg 21472991  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||||||||||||||  |||||||||| | |   || || ||||||| ||||||||| ||| ||||||||||| ||| |||| ||    
T  21472990 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgcgttcaggaggactggttttgccatccaaaaaggtctagcggcgcaacttattgcccg 21472891  T
Q  234 cttgccttcta 244  Q
    ||||| |||||    
T  21472890 cttgcattcta 21472880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 28041149 - 28041357
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||  |  ||||||| ||| ||||||||||||||||  |||| ||||||||||||  ||||||||||||||||||||||||| ||    
T  28041149 gtgttctgacaatcaacaggt--ttttataccatttgcttttgacactttcggtttcctagcaccagaggcggttgaccttctacatagagttcaaaagg 28041246  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||||||  ||| ||  ||||||||||||||   || ||||| |||| ||||||||| ||| ||||||||| |||||||||  ||    
T  28041247 tcatgcatagcaatgtcatgtcctctaagtccatgaatgttgtgctcatgaggattgatttttccatccaaaaaggtctagcggcggagcttgttgtccg 28041346  T
Q  234 cttgccttcta 244  Q
    |||| ||||||    
T  28041347 cttgtcttcta 28041357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 53 - 236
Target Start/End: Complemental strand, 34644634 - 34644451
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||||||||| ||| || |||||||||||||   ||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||    
T  34644634 atgcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgaccttctacatagagtccaaagggttatgcatatcaatgttat 34644535  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgctt 236  Q
    |||||||||||  |||||||||||| || ||||||||| |||| ||||||||| | | |||||||||||| ||||||| |||||    
T  34644534 gtctcctaggtccatgaatgttgtgtttacgatgattgattttgccatccaaaaaagtctagcggcgcagtttgttgcccgctt 34644451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 41 - 244
Target Start/End: Original strand, 24177540 - 24177741
Alignment:
Q  41 gacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgca 140  Q
    ||||||||||||||  ||||||| ||| || |||||||| ||||  |||| ||||| |||||| |||| |||||||||||||||||||||  ||||||||    
T  24177540 gacaatcaacatat--ttttataccatttgtttttgacagtttcggtttcctagcatcagaggctgtttaccttctacatagagttcaaaaagtcatgca 24177637  T
Q  141 tagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||||||||||| ||||||||||  |||||||||||| |  ||| |||||||||| ||| ||||| ||| ||||||| |||||||||||| |||||| ||    
T  24177638 tagcaatgtcatatctcctaggtccatgaatgttgtgttcacgaggattggttttgccaaccaaaaaggtctagcggtgcagcttgttgcccgcttgtct 24177737  T
Q  241 tcta 244  Q
    ||||    
T  24177738 tcta 24177741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 20259819 - 20260013
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| |  | |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  20259819 gtgttctgacaatcaacatgt--ttttataccatttattgttgacactttcggtttcttagcaccagaggttgttgaccttctacatagagttcaaaagg 20259916  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    |||||||||| ||||||||||||| || ||| || ||||||||| ||     |||||||||| ||||||||| ||| |||||||||||| |||||||    
T  20259917 tcatgcatagtaatgtcatgtctcataagttaataaatgttgtgtttatatggattggttttgccatccaaaaaggtctagcggcgcagtttgttgc 20260013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 29169815 - 29169940
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||  |||| ||||||||||||||||| ||||||||||||||||||||| ||    
T  29169815 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttaaccttctacatagagttcaaaagg 29169912  T
Q  134 tcatgcatagcaatgtcatgtctcctag 161  Q
    ||||||| ||||||||||||||||||||    
T  29169913 tcatgcacagcaatgtcatgtctcctag 29169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 2764564 - 2764372
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||| ||||||||||||  ||||||||  ||| | |||||||||||||||  ||| ||||| |||||||||||||||||||||||| ||| |||||||    
T  2764564 gtgttccgacaatcaacat--gcttttatgccattttcttttgacactttcagcttcctagcatcagaggttgttgaccttctacataaagtccaaaggg 2764467  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    | ||||| | |||||| ||||||| |||||  || ||||||||| || ||||||||| |||||||||||||| |||  |||||||||||||||||    
T  2764466 ttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgtttacgatgattgattttaccatccaaaaaggtttagcggcgcagcttgtt 2764372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 2898786 - 2898595
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||| |   | ||||||| ||| ||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||| |     
T  2898786 gtgttctgacaatcaata---gtttttataccatttgcttttgatactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaaga 2898690  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    ||||||||| |||| ||||||||| || | | |||||||||||| ||  || ||||| |||| ||||||||| |||| |||||||| ||||||||    
T  2898689 tcatgcataacaatatcatgtctcatacgatcatgaatgttgtgtttaagaggattgattttgccatccaaaaaggcttagcggcgtagcttgtt 2898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 45659670 - 45659795
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||| ||||| || ||||||||| ||||||||||||  |||||||||||| |     
T  45659670 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcgatttcctatcaccagaggctgttgaccttct--atagagttcaaaaga 45659765  T
Q  134 tcatgcatagcaatgtcatgtctcctaggt 163  Q
    ||||||||||||||||||||||||||||||    
T  45659766 tcatgcatagcaatgtcatgtctcctaggt 45659795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 37 - 230
Target Start/End: Original strand, 4862014 - 4862206
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||||| |||||||  ||||||||  || |||||||||||||||| ||||| || ||||| | ||||||||||||||||||||||||||||||||||    
T  4862014 ttctgacaagcaacata--cttttatacaatttgcttttgacactttcgatttcctaacaccaaaagttgttgaccttctacatagagttcaaagggtca 4862111  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattg-gttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    |||||| |||||||| ||| | ||| |  |||||||||||| || ||| |||||  |||| ||||  |   ||||||||||||||||||||||||    
T  4862112 tgcataacaatgtcacgtcccttagatccatgaatgttgtgattacgaggattgatttttgccatatatgaaggcctagcggcgcagcttgttgc 4862206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 37 - 229
Target Start/End: Original strand, 31737348 - 31737537
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||||||||||||  ||||||||| ||| || ||||||||||||| ||||  |||||  ||||| | ||||| |||||||||||||||||| |||||    
T  31737348 ttctgacaatcaacat--gcttttataccatttgtttttgacactttcgattttctagcattagaggctattgacattctacatagagttcaaaaggtca 31737445  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttg 229  Q
    |||||| |||||| |||| |||||| |  |||||| | ||| || ||| ||||| |||| ||||||||| |||| | ||||||||||||||||    
T  31737446 tgcatatcaatgttatgtttcctagatccatgaat-tagtgtttacgaggattgattttgccatccaaaaaggcttggcggcgcagcttgttg 31737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 38731694 - 38731553
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||||  ||||||||  || ||||||||| |||||    ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  38731694 gtgttctgacaatcaacata--cttttatacaatttgcttttgaaacttttggcttcttagcaccagaggttgttaaccttctacatagagttcaaaggg 38731597  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    ||||||| |  ||||||||| |||||||||  |||||| |||||    
T  38731596 tcatgcacaataatgtcatgactcctaggtccatgaatattgtg 38731553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 868513 - 868631
Alignment:
Q  124 gttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagc 223  Q
    ||||||| ||||||||||||||||||||||||||||| ||  ||||||  |||| |  | | |||||||||| ||||||||| ||| |||||||||||||    
T  868513 gttcaaaaggtcatgcatagcaatgtcatgtctcctaagtccatgaat--tgtgttcacaaggattggttttgccatccaaaaaggtctagcggcgcagc 868610  T
Q  224 ttgttgctcgcttgccttcta 244  Q
    ||||||| |||||||||||||    
T  868611 ttgttgcccgcttgccttcta 868631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 7213299 - 7213120
Alignment:
Q  72 ttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaat 171  Q
    |||||||||||||  |||| |||||  ||||  |||||| ||||| |||| ||||||||  ||||||||||  |||||||||||| ||||||  ||||||    
T  7213299 ttttgacactttcggtttcctagcattagagactgttgagcttctgcataaagttcaaaatgtcatgcataataatgtcatgtcttctaggtccatgaat 7213200  T
Q  172 gttgtgcttgcga-------tgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||| |  |||       ||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  7213199 gttgtgttcacgaatcacgatgattggttttaccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttcta 7213120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 30688534 - 30688434
Alignment:
Q  144 caatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttct 243  Q
    |||||||||| ||||| |||  |||||||||||| || ||| ||||||||||   ||||||| |||||||||||||||||||||||| |||||||| |||    
T  30688534 caatgtcatgactcctgggtccatgaatgttgtgtttacgaggattggttttgttatccaaaaaggcctagcggcgcagcttgttgcccgcttgccatct 30688435  T
Q  244 a 244  Q
    |    
T  30688434 a 30688434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 42919945 - 42919832
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| ||||||||||| |  ||||||  |||||||||||||||||||  |||||  ||||  |||| ||||| ||||||||||||||||| ||||||    
T  42919945 gtgttctcacaatcaacatgt--ttttatgtcatctgcttttgacacttttgatttccaagcagtagagattgttaaccttctacatagagtttaaaggg 42919848  T
Q  134 tcatgcatagcaatgt 149  Q
    ||||||| ||||||||    
T  42919847 tcatgcagagcaatgt 42919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 47459746 - 47459575
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| ||||||||| |||||    ||| ||| | ||||||  |||||||||||||||||||| ||||||   |||||||||||||| ||||||    
T  47459746 ttttataccatttgcttttgatacttttggcttcctagtatcagaggcagttgaccttctacatagagtccaaaggaatatgcatagcaatgttatgtct 47459647  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttg 229  Q
    |||| || ||| ||||||||| || |||  |||| |||  |||| |||| ||| ||||| |||||||||||||    
T  47459646 cctaagtctataaatgttgtgtttacgagaattgatttagccattcaaaaaggtctagc-gcgcagcttgttg 47459575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 35387747 - 35387802
Alignment:
Q  105 tgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctccta 160  Q
    |||||| |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  35387747 tgttgatcttctacatagagttcaaagggacatgcatatcaatgtcatgtctccta 35387802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 50314647 - 50314771
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    |||||| |||||||||||  ||||||||| ||| | ||||||||| |||  ||||| || ||| ||| ||||||||| ||||||||||||||||||||||    
T  50314647 tgttctcacaatcaacat--gcttttataccatttacttttgacattttttatttcctaacacaagatgttgttgactttctacatagagttcaaagggt 50314744  T
Q  135 catgcatagcaatgtcatgtctcctag 161  Q
     || |  | |||||||||| |||||||    
T  50314745 tatacgcaacaatgtcatgactcctag 50314771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 18616184 - 18616286
Alignment:
Q  44 aatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatag 143  Q
    ||||||||| || ||||||| ||| || |||| |||||||| | ||  ||||||| |||| ||||||| ||||||||| | |||||||||||||||||||    
T  18616184 aatcaacatgtg-ttttataccatttgtttttaacactttcgactttctagcacccgaggctgttgacattctacatataattcaaagggtcatgcatag 18616282  T
Q  144 caat 147  Q
    ||||    
T  18616283 caat 18616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 5454050 - 5453976
Alignment:
Q  166 atgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||||||||||| || | | ||||||||||  |||||||| ||| |||||||||||||||||||| |||||||||    
T  5454050 atgaatgttgtgtttacaaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgcccgcttgcct 5453976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 50161498 - 50161554
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatg 148  Q
    |||||||| |||||| |||| |||||||||||||||||||| ||||||| |||||||    
T  50161498 tagcaccaaaggttgatgacattctacatagagttcaaaggatcatgcagagcaatg 50161554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 1114023 - 1114098
Alignment:
Q  169 aatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||||| || ||| |||||||||| ||||||||| ||| ||| |||| ||||||||||| |||||| ||||||    
T  1114023 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctaacggcacagcttgttgcccgcttggcttcta 1114098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 6670208 - 6670265
Alignment:
Q  117 acatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgtt 174  Q
    ||||||||||||||| |||||||||  ||||||||| |||||||| || |||||||||    
T  6670208 acatagagttcaaagagtcatgcattacaatgtcatatctcctagattcatgaatgtt 6670265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 44420636 - 44420591
Alignment:
Q  197 ccatccaaataggcctagcggcgcagcttgttgctcgcttgccttc 242  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||    
T  44420636 ccatccaaaaaggcttagcggcgcagtttgttgctcgcttgccttc 44420591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 11128361 - 11128445
Alignment:
Q  121 agagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||| ||| ||||||||||| |||||| ||||||||||||| ||| |||| |||| || | |||||| ||||| | |||||||    
T  11128361 agagtttaaaaggtcatgcatatcaatgttatgtctcctaggtctataaatgatgtgtttacaatgatttgtttttctatccaaa 11128445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 36486897 - 36486770
Alignment:
Q  101 aggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccat 200  Q
    ||||||||| |||||||||  || |||||| ||||||||||| | |||| || ||||| | ||  |||||| || || || |||||||||||||||  ||    
T  36486897 aggttgttgcccttctacacgga-ttcaaatggtcatgcataaccatgttatatctcccaagtcaatgaatattttgtttacgatgattggttttattat 36486799  T
Q  201 ccaaataggcctagcggcgcagcttgttg 229  Q
    ||||| || |||| ||||| |||||||||    
T  36486798 ccaaaaagacctaacggcggagcttgttg 36486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 7483839 - 7483769
Alignment:
Q  166 atgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttg 237  Q
    |||||||||||| || ||| |||| ||||| ||||| ||| |||| |||||||||||| |||||||||||||    
T  7483839 atgaatgttgtgtttacgaagattagttttgccatctaaaaaggcttagcggcgcagc-tgttgctcgcttg 7483769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 48841174 - 48841297
Alignment:
Q  106 gttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||||||||||||||  |||| || |||||||  ||||| ||||||||||  | ||||||| || || || ||| ||||| |||| | |||||||    
T  48841174 gttgaccttctacatagagtctaaagagttatgcataataatgttatgtctcctaaatctatgaatattatgtttacgaggattgattttgcaatccaaa 48841273  T
Q  206 taggcctagcggcgcagcttgttg 229  Q
     | | ||||| ||||| |||||||    
T  48841274 aaagtctagcagcgcaacttgttg 48841297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 19035414 - 19035356
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||||||  |||||||| ||| |||||||||||||||||||  || ||||||||||    
T  19035414 gattggttttgtcatccaaaaaggtctagcggcgcagcttgttgtccgattgccttcta 19035356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 19035532 - 19035465
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagagg 103  Q
    |||||||||||||||||||  ||||||||| ||| | |||||||||||| |  |||| ||||||||||||    
T  19035532 gtgttctgacaatcaacat--gcttttataccatttacttttgacacttacggtttcctagcaccagagg 19035465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 3401886 - 3401927
Alignment:
Q  104 ttgttgaccttctacatagagttcaaagggtcatgcatagca 145  Q
    |||||||| |||||||||||||| |||| |||||||||||||    
T  3401886 ttgttgacattctacatagagtttaaagtgtcatgcatagca 3401927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 3444933 - 3444892
Alignment:
Q  104 ttgttgaccttctacatagagttcaaagggtcatgcatagca 145  Q
    |||||||| |||||||||||||| |||| |||||||||||||    
T  3444933 ttgttgacattctacatagagtttaaagtgtcatgcatagca 3444892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 4611161 - 4611069
Alignment:
Q  149 tcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcctt 241  Q
    |||||||||||||||  |||||| ||||| |  ||||||||| ||||  |||||||| ||| ||| | || ||||||||||  ||||||||||    
T  4611161 tcatgtctcctaggtccatgaatattgtgttcacgatgattgattttgtcatccaaaaaggtctaacagcacagcttgttgtccgcttgcctt 4611069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 21934312 - 21934268
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  21934312 gattggttttgccatccaaaaagggttagcggcgcagcttgttgc 21934268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 17249327 - 17249531
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||    ||| ||||| ||||||  |||||||||||||||||||| ||||||     
T  17249327 gtgttctgacaatcaacat--gcttttataccatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttctacatagagtccaaagga 17249424  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | ||| |||||||||| |||||||||| ||| |||||||||||| || ||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||    
T  17249425 ttatgtatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccg 17249524  T
Q  234 cttgcct 240  Q
    |||||||    
T  17249525 cttgcct 17249531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 33220739 - 33220937
Alignment:
Q  40 tgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgc 139  Q
    |||||||||||||  ||||||||| ||| ||||||||||||||||   ||| ||||| | |||||||||||||||||||||| ||| |||||||| ||||    
T  33220739 tgacaatcaacat--gcttttataccatttgcttttgacactttcggcttcctagcatccgaggttgttgaccttctacatatagtccaaagggttatgc 33220836  T
Q  140 atagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcc 239  Q
    ||||||||||  ||||| ||||||  |||||||||| | || |||| ||||||||| |||||| || ||| |||||||||||||||||||  ||||||||    
T  33220837 atagcaatgttgtgtcttctaggtccatgaatgttgcgtttacgataattggttttgccatcctaaaaggtctagcggcgcagcttgttggccgcttgcc 33220936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 4206618 - 4206787
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||| |||||  ||||||||| ||| ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||| ||    
T  4206618 gtgttctgacaatgaacat--gcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgaccttctacatagagttcaaaagg 4206715  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||  |||||||||||| |||||||  |||||| | ||| || ||| |||||||||| |||||||||    
T  4206716 tcatgcatgacaatgtcatgtcacctaggtcaatgaatatagtgtttacgaggattggttttgccatccaaa 4206787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 28626016 - 28625808
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| || |||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||    
T  28626016 gtgttctgacaatcaacatttt-ttttataccatttgttttttacactttcaatttcctagcaccagaggttgttgagcttctacataaagttcaaaagg 28625918  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| | ||||||| |||| ||||| ||||||||||||| || ||  ||||| |||| |||| |||| ||  ||||||||||||||| || | ||    
T  28625917 tcatgcataac-atgtcatatctcataggtctatgaatgttgtgtttacggagattgattttgccattcaaaaagatctagcggcgcagcttattacccg 28625819  T
Q  234 cttgccttcta 244  Q
     ||||||||||    
T  28625818 tttgccttcta 28625808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 4165944 - 4166113
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||| ||| ||    
T  4165944 gtgttctgacaatcaacat--gcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgaccttctacatagagtttaaaagg 4166041  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    ||||||||  |||||||||||| |||||||  || ||| | ||| || ||| |||||||||| |||||||||    
T  4166042 tcatgcatgacaatgtcatgtcacctaggtcaataaatatagtgtttacgaggattggttttgccatccaaa 4166113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 45699 - 45819
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||  ||| || |||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||| ||    
T  45699 gtgttctgacaatcaacat--gcttttattccatttgtttttgacactttcggtttcttagcaccagaggctgttgaccttctacatagagttcaaaagg 45796  T
Q  134 tcatgcatagcaatgtcatgtct 156  Q
    |||||||||||||||| ||||||    
T  45797 tcatgcatagcaatgttatgtct 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 959665 - 959458
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |   |||||| ||| || |||||||| ||||  |||| ||||||||||||||||||||||||||| || |||||||| ||    
T  959665 gtgttctgacaatcaacatgtc--tttataccatttgtttttgacattttcggtttcctagcaccagaggttgttgaccttctacgta-agttcaaaagg 959569  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||  ||||||||||||  |||||||||||| || ||| ||||| ||||  |||| ||| ||||||| | || || ||| || ||||    
T  959568 tcatgcatagcaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattgattttgtcatctaaaaaggcctaacagcacaacttatttctcg 959469  T
Q  234 cttgccttcta 244  Q
    ||||| |||||    
T  959468 cttgctttcta 959458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 29338101 - 29338295
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| |||||||||||  ||| ||||| ||| ||||||||||||||   | ||| ||||||||||| | ||||||||||||||||  ||||||||||    
T  29338101 gtgttctaacaatcaacat--gctcttataccatttgcttttgacacttctgacttcctagcaccagagatcgttgaccttctacatatggttcaaaggg 29338198  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    ||||||| | |||||||||| |||||||||  |||||||||||| || | | ||||| |||| | |||||||  |||||||| | ||||||||||||    
T  29338199 tcatgcacatcaatgtcatgactcctaggtccatgaatgttgtgtttacaaggattgatttttctatccaaaatggcctagcagtgcagcttgttgc 29338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 34 - 218
Target Start/End: Complemental strand, 34304581 - 34304399
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||    ||| ||||| |||| | ||||||||||||||||||||| ||||| |    
T  34304581 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttgggcttcctagcatcagatgatgttgaccttctacatagagtccaaagag 34304484  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggc 218  Q
    | |||||||||||| ||||||||| ||||| ||||||||||||  || ||| ||||| |||| | ||||||| |||  |||||||    
T  34304483 ttatgcatagcaatatcatgtctcataggtctatgaatgttgtatttacgaggattgattttgcaatccaaaaaggtatagcggc 34304399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 3137362 - 3137475
Alignment:
Q  129 aagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| || ||| |||||||||| ||||||||| |||| |||| | ||| ||||||    
T  3137362 aagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaaggcttagcagtgcaacttgtt 3137461  T
Q  229 gctcgcttgccttc 242  Q
    || || ||||||||    
T  3137462 gcccgtttgccttc 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 32115734 - 32115622
Alignment:
Q  105 tgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaa 204  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||| || ||||||||| |||| | ||| ||    
T  32115734 tgttgaccttctacaaagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgctatctaa 32115635  T
Q  205 ataggcctagcgg 217  Q
    | ||| |||||||    
T  32115634 aaaggtctagcgg 32115622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 57 - 236
Target Start/End: Original strand, 34554320 - 34554498
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| | |||||||||| |||   ||| |||||||||| | | ||||| |||||||||||||| ||| ||||||| |||||||| ||||||||    
T  34554320 ttttataccatttacttttgacacattcggcttcctagcaccagatgctattgactttctacatagagtttaaaaggtcatgtatagcaatatcatgtct 34554419  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgctt 236  Q
    | || | | |||||| ||||| || ||| ||||| ||||  |||||||| |||||||| ||| |||||| ||||||||||    
T  34554420 cgtaag-tcatgaattttgtgtttacgaggattgattttgtcatccaaaaaggcctagtggcacagcttattgctcgctt 34554498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 34415521 - 34415404
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||  ||| || ||||||||||||   |||| || ||||| | |  |||||||||||| |||||||||||| ||    
T  34415521 gtgttctgacaatcaacat--gcttttatgccatttgtttttgacactttaggtttcctaacaccaaatgcagttgaccttctatatagagttcaaatgg 34415424  T
Q  134 tcatgcatagcaatgtcatg 153  Q
    ||||||||||||||||||||    
T  34415423 tcatgcatagcaatgtcatg 34415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 34168897 - 34168798
Alignment:
Q  144 caatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttct 243  Q
    |||||||||| ||||||| |  |||||||||||| || ||| |||||||||| | ||||||| ||||||||||||||| ||||| || ||||||||||||    
T  34168897 caatgtcatgactcctagatccatgaatgttgtg-ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttct 34168799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 3714981 - 3714838
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| |||||| ||||||||||||  | ||| |||||||| ||  | |||| ||||||||||||||| ||||  ||||||| | |||||||||||||    
T  3714981 ttttatatcatctgtttttgacacttttgacttcttagcaccaaagactcttgatcttctacatagagtttaaagaatcatgcacaacaatgtcatgtct 3714882  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccat 200  Q
    | ||  |  |||||||||||| |||| | ||||| |||||||||    
T  3714881 cataaatccatgaatgttgtgtttgcaaggattgattttaccat 3714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 24016421 - 24016298
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    |||||| ||||||||||| |  ||||||| ||| |||| |||| | |||   |||| |||||||||| ||||||||  || |||||||||||||||||||    
T  24016421 tgttctcacaatcaacatgt--ttttataccatttgctattgatagttttggtttcctagcaccagatgttgttgattttttacatagagttcaaagggt 24016324  T
Q  135 catgcatagcaatgtcatgtctccta 160  Q
    |||||| |  ||||||||||||||||    
T  24016323 catgcacaagaatgtcatgtctccta 24016298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 357739 - 357879
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||| |||||  ||||||||||| | || |||| |||||||   |||| || ||  |||||||| |||||||||||||||||| |||| |     
T  357739 gtgttctgacaatgaacat--gcttttataacctttgtttttaacacttttg-tttcctaacattagaggttgatgaccttctacatagagtccaaatga 357835  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    | | |||||||||||| || ||||||||||  ||||||||||||    
T  357836 ttaagcatagcaatgttatctctcctaggtccatgaatgttgtg 357879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 28009010 - 28009217
Alignment:
Q  35 tgttctgacaatcaaca-tatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||| |||||||| | |||| ||||||| ||| |||||||||||||||   |  | || ||||| | ||||||||||||||  ||| |||||||||||    
T  28009010 tgttctaacaatcaagaatatggttttataccatttgcttttgacacttt---tggcttaacaccaaaagttgttgaccttctgtatatagttcaaaggg 28009106  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||| || | |||||||||| |||||||||  ||||| |||||  || | |  |||| |||| | ||||||| ||||||| || |||||||| |||  ||    
T  28009107 tcatacacaacaatgtcatgactcctaggtccatgaacgttgtctttaccagaattgattttgcaatccaaaaaggcctaacgacgcagcttattgtccg 28009206  T
Q  234 cttgccttcta 244  Q
     ||||||||||    
T  28009207 tttgccttcta 28009217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 7749436 - 7749362
Alignment:
Q  166 atgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||||||||||| || ||| |||||||||| |||||| || ||| ||||||| |||||||||||| |||||||||    
T  7749436 atgaatgttgtgtttacgaggattggttttgccatcctaaaaggtctagcggtgcagcttgttgcccgcttgcct 7749362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 31703561 - 31703645
Alignment:
Q  106 gttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattg 190  Q
    ||||||||||||||||||||| ||| | ||||||| | |||| ||||||||| | |||| |||||| ||||||||  ||||||||    
T  31703561 gttgaccttctacatagagtttaaatgatcatgcacatcaatatcatgtctcattggttcatgaatattgtgcttaggatgattg 31703645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 13398266 - 13398373
Alignment:
Q  98 cagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttac 197  Q
    |||| ||||||||| |||||||||||||||||| | | ||||||| |||||||| | || |||| |  || ||||||||| || ||||| ||| ||||      
T  13398266 cagaagttgttgacattctacatagagttcaaaagatgatgcataacaatgtcacgacttctagatgcataaatgttgtgtttacgatggttgattttgt 13398365  T
Q  198 catccaaa 205  Q
    ||||||||    
T  13398366 catccaaa 13398373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 7200627 - 7200697
Alignment:
Q  106 gttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||||||||| |||||| | ||||||| ||||||||||||||  | ||||||||||| |  |||||||||||    
T  7200627 gttgaccttttacataaatttcaaagagtcatgcatagcaacattatgtctcctagatcaatgaatgttgt 7200697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 26225657 - 26225770
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattgg 191  Q
    |||||| ||| ||||||| ||||| |||||||||||||||| ||||||| || ||  | |||||| ||||||  ||| || ||||| ||  || ||||||    
T  26225657 tagcactagatgttgttggccttcaacatagagttcaaaggctcatgcagagaaacattatgtcttctaggtcgatggattttgtgtttatgaggattgg 26225756  T
Q  192 ttttaccatccaaa 205  Q
    ||||  ||||||||    
T  26225757 ttttgtcatccaaa 26225770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 3330077 - 3329877
Alignment:
Q  38 tctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcat 137  Q
    |||||||||||||||  |||||||||  || |||||||||||||||    ||| ||||| ||||||  |||||||||||||||||||| |||||||| ||    
T  3330077 tctgacaatcaacat--gcttttatactatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttctacatagagtccaaagggttat 3329980  T
Q  138 gcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttg 237  Q
    |||||||||||| |||||||||||||  ||||||| |||| || |||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||    
T  3329979 gcatagcaatgttatgtctcctaggtccatgaatgctgtgtttacgatgattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttg 3329880  T
Q  238 cct 240  Q
    |||    
T  3329879 cct 3329877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 4419310 - 4419145
Alignment:
Q  74 ttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgt 173  Q
    |||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||  ||||||||    
T  4419310 ttgacactttcggcttcgtagcatcagaggttgttgaccttctacatagagttcaaagggttatgcataacaatgttatgtctcctaggtccatgaatgt 4419211  T
Q  174 tgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||| || |||||||||||||| ||||||||| |   |||||||||||||||||||| |||||||||    
T  4419210 tgtgtttacgatgattggttttgccatccaaa-aaatctagcggcgcagcttgttgcccgcttgcct 4419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 34 - 230
Target Start/End: Complemental strand, 53619671 - 53619477
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| || ||||||||||||  | ||| ||||| ||||||  ||||||||||||||||||||  ||||||    
T  53619671 gtgttctgacaatcaacat--gcttttataccatttgtttttgacacttttgacttcctagcatcagaggcagttgaccttctacatagagtctaaaggg 53619574  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    | ||||||| |||||| ||||||| |||||  |||||||||||| || |||  ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  53619573 ttatgcataacaatgttatgtctcttaggtccatgaatgttgtgtttacgagaattggttttgccatccaaaaaggtctagcggcgcagcttgttgc 53619477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 30940761 - 30940962
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||||| ||||| ||||||| |||| ||||      |||||||||||||||| ||    
T  30940761 gtgttctgacaatcaacat--gcttttataccat-tgcttttgacactttcgatttcctagcacctgaggctgtt------ctacatagagttcaaaagg 30940851  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| ||||||||| | |||||||| ||||||||||||| |   || ||||| |||| ||||||||| ||| |||||| ||||||||||||| ||    
T  30940852 tcatgcataacaatgtcatatatcctaggtctatgaatgttgtgttcatgaggattgattttgccatccaaaaaggtctagcgacgcagcttgttgcccg 30940951  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  30940952 cttgccttcta 30940962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 53 - 244
Target Start/End: Original strand, 600731 - 600922
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||||||||| ||| |||||||| |||||||  |||| || |||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||||    
T  600731 atgcttttataccatttgcttttgtcactttcggtttcctaacaccagaggttgttgaccttctacatagagttcaaaaggtcatgtataactatgtcat 600830  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||||  || |||| |||| || |||||||| ||||| ||||||||| | |  ||||| || |||||||||  |||||||||||||    
T  600831 gtctcctaggtccattaatgctgtgtttacgatgattagttttgccatccaaaaatgtatagcgacgtagcttgttgtccgcttgccttcta 600922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 26521573 - 26521366
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| |||||||||||||  ||||||||| ||| ||||||  |||||||   |||| |||||||||||| ||||||||||||||||| |||||||||||    
T  26521573 gtgttatgacaatcaacat--gcttttatatcatatgctttcaacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaaggg 26521476  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||| |||||||||||||| |||||||   ||| |||||||| || ||| ||||||||||  |||||||| |||  ||||||| |||||| |||  ||    
T  26521475 tcatgcgtagcaatgtcatgtatcctaggcccatg-atgttgtgtttacgaggattggttttgtcatccaaaaaggtttagcggcacagctttttgtccg 26521377  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  26521376 cttgccttcta 26521366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 35 - 240
Target Start/End: Original strand, 55933485 - 55933686
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    |||||| |||||||||||  ||||||||| ||| |||||||||||||||| | ||| ||||| |||  ||||||||||||||||||||||| ||||||||    
T  55933485 tgttctaacaatcaacat--gcttttataccatttgcttttgacactttcgacttcctagcatcag--gttgttgaccttctacatagagtccaaagggt 55933580  T
Q  135 catgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgc 234  Q
     || |||| |||| | |||||||||||||   ||||||||||| || ||||||||| |||| ||||||||| | | |||||| ||||| ||||||  |||    
T  55933581 tatacataacaatattatgtctcctaggtccgtgaatgttgtgtttacgatgattgattttgccatccaaaaaagtctagcgacgcagtttgttgtccgc 55933680  T
Q  235 ttgcct 240  Q
    ||||||    
T  55933681 ttgcct 55933686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 57 - 230
Target Start/End: Original strand, 34107739 - 34107912
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| || ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||| ||||||    
T  34107739 ttttataccatttgtttttgacactttcgatttcctagcaccagaggctgttgaccttctacatagagttcaaaaagtcatgcataacaatgttatgtct 34107838  T
Q  157 cctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgc 230  Q
    ||||| |  |||||||||||| |  ||| ||||||||||  |||||||| | |  || |||| |||||||||||    
T  34107839 cctagatccatgaatgttgtgttcacgaggattggttttgtcatccaaaaaagtttaacggcacagcttgttgc 34107912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 50000947 - 50001152
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataaca-tctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagg 132  Q
    |||||||||||||||||||  |||||||  ||| | |||||||||||||||    ||  ||||| ||||||  |||||||||||||||| ||| ||||||    
T  50000947 gtgttctgacaatcaacat--gcttttaatacaatttgcttttgacacttttggctttctagcatcagaggcagttgaccttctacatatagtccaaagg 50001044  T
Q  133 gtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctc 232  Q
    || |||||||||||||| ||||||||||| |  || ||||||||| || ||| ||||| |||| ||||||||| ||  |||||||||||||||||||| |    
T  50001045 gttatgcatagcaatgttatgtctcctagatccataaatgttgtgtttacgaagattgattttgccatccaaaaagatctagcggcgcagcttgttgccc 50001144  T
Q  233 gcttgcct 240  Q
    ||||||||    
T  50001145 gcttgcct 50001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 50464387 - 50464526
Alignment:
Q  105 tgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaa 204  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |  | ||||||||||||| || ||| ||||  |||| ||||||||    
T  50464387 tgttgaccttctacgtagagtttaaagggtcatgcataacaatgtcatgtctcccaaatatatgaatgttgtgtttacgaggatttattttgccatccaa 50464486  T
Q  205 ataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    | || ||||||||||||||||||||  |||||||||||||    
T  50464487 aaagacctagcggcgcagcttgttgtccgcttgccttcta 50464526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 56462128 - 56462287
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| || ||| ||||||||   |||| |||||||||||||||||||||||||||||||||||||||||     
T  56462128 gtgttctgacaatcaacatgt--ttttataccatttgttttagacacttttggtttcctagcaccagaggttgttgaccttctacatagagttcaaagga 56462225  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    ||||||||  ||||||||||||||||| ||  || ||||||||| || |||  |||||||||    
T  56462226 tcatgcatgacaatgtcatgtctcctaagtccataaatgttgtgtttacgagaattggtttt 56462287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 6865842 - 6865967
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||| ||||||||  ||||||||| ||| ||||||||||||||| |  ||| |||||| ||| |||||| ||||| ||||||||||||||||||    
T  6865842 gtgttctgactatcaacat--gcttttatatcatttgcttttgacactttgagcttcatagcactagatgttgttaaccttttacatagagttcaaaggg 6865939  T
Q  134 tcatgcatagcaatgtcatgtctcctag 161  Q
    | ||||||||||||||||||||||||||    
T  6865940 taatgcatagcaatgtcatgtctcctag 6865967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 7536593 - 7536794
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| ||||||||||||| |  |||||||  || || |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| |     
T  7536593 gtgttttgacaatcaacatgt--ttttatacaatttgtttttgacaatttcagtttcctagcaccagaggttgttgaccttctacatagagttcaaatga 7536690  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    || ||||||||||| | ||||||| ||| |  ||||||||| || || | ||||||||||||   ||||||| ||  ||||| | ||| |||||||||||    
T  7536691 tcgtgcatagcaattttatgtctcgtagatccatgaatgttatgtttacaatgattggttttgtgatccaaaaagatctagcagtgcaacttgttgctcg 7536790  T
Q  234 cttg 237  Q
    ||||    
T  7536791 cttg 7536794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 53170565 - 53170474
Alignment:
Q  69 tgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctccta 160  Q
    ||||||||||||||||  |||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  53170565 tgcttttgacactttcggtttgctagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctccta 53170474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 16955489 - 16955391
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattg 190  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||| || ||| |||||    
T  16955489 tagcaccagaggttgctgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggcccatgaatgttgtgtttacgaggattg 16955391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 106 - 240
Target Start/End: Complemental strand, 39001412 - 39001278
Alignment:
Q  106 gttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||||||||||||||||| |||||| | ||||||| ||||||  ||||||||||||  |||||||||||| || ||| ||||||||||  ||||||||    
T  39001412 gttgaccttctacatagagtccaaaggattatgcataacaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaa 39001313  T
Q  206 taggcctagcggcgcagcttgttgctcgcttgcct 240  Q
     ||| |||||||||||| ||||||| |||||||||    
T  39001312 aaggtctagcggcgcagtttgttgcccgcttgcct 39001278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 50462975 - 50463170
Alignment:
Q  41 gacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgca 140  Q
    ||||||||||||  ||||| ||| ||| |||||||||||||||  ||||| |  ||||||||  |||||||||||||| ||||||| |||||| ||||||    
T  50462975 gacaatcaacat--gctttcataccatttgcttttgacacttttgatttccttacaccagagactgttgaccttctacgtagagtttaaagggccatgca 50463072  T
Q  141 tagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    || ||||| ||||||||| | || |||||   ||||| || ||| |||| ||||| ||||||||| || ||||||||||||||||| ||  |||||||||    
T  50463073 taacaatgccatgtctcccaagtatatga---ttgtgtttacgaggatttgttttgccatccaaaaagacctagcggcgcagcttgctgtccgcttgcct 50463169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 195
Target Start/End: Original strand, 38535608 - 38535750
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||| ||||| ||| ||| |||||||||||  | ||| ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  38535608 atgctcttataccatttgcatttgacacttttgacttcctagcaccagaggttgttcaccctctacatagagttcaaagagtcatgcatagcaatgtcat 38535707  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    ||||  |||||  ||| |||||||| || ||| |||| |||||    
T  38535708 gtcttataggtccatggatgttgtgtttacgaggattagtttt 38535750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 50483221 - 50483320
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||||||||||||  | ||||||| ||| |||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  50483221 ttctgacaatcaacat--gattttataccatttgctttcgacactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaaggtca 50483318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 132470 - 132262
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| || |||| ||||||||  |||| ||  | ||||| |||||||| ||||||| |||||| ||||||    
T  132470 gtgttctgacaatcaacat--gcttttataccatttgttttttacactttcggtttcctaatatcagagattgttgacattctacacagagtttaaaggg 132373  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||| ||||| |||||||||||||  |||||| |||| ||||||| || | |  || | ||||| |||| ||| |||  || ||| |||||||||| | ||    
T  132372 tcaagcataacaatgtcatgtcttttaggttcatgattgttgtgtttacaagaatcgattttatcatctaaaaaggtataacggtgcagcttgttccccg 132273  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  132272 cttgccttcta 132262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 23255728 - 23255605
Alignment:
Q  106 gttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||||||||||||||||| |||||||| ||||||| |||||| |||||||||| ||  |||||| ||||| || ||| ||||| |||| ||||||| |    
T  23255728 gttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatattgtgtttacgaggattgattttgccatccaga 23255629  T
Q  206 taggcctagcggcgcagcttgttg 229  Q
     | | |||||||||||||||||||    
T  23255628 aaagtctagcggcgcagcttgttg 23255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 113 - 245
Target Start/End: Complemental strand, 45661699 - 45661567
Alignment:
Q  113 ttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcct 212  Q
    ||||||||| ||||||||||||||| || | |||||||||  ||| |||||  |||||| ||||| || ||| |||||||||||| ||||||| || |||    
T  45661699 ttctacataaagttcaaagggtcatacacaacaatgtcataactcgtaggtccatgaatattgtgtttacgaggattggttttactatccaaaaagacct 45661600  T
Q  213 agcggcgcagcttgttgctcgcttgccttctac 245  Q
    | |||  ||| ||||||| ||||||||||||||    
T  45661599 aacggtacagtttgttgcacgcttgccttctac 45661567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 48656953 - 48657106
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagc-accagaggttgttgacctt----ctacatagagttcaaagggtcatgcatagcaatgtca 151  Q
    ||||||| ||| || ||||||||||||| | ||| |||| |  ||||||||||||||||    ||||||||||| |||| | | |||||||||||||| |    
T  48656953 ttttataccatttgtttttgacactttcgacttcttagcgattagaggttgttgaccttccttctacatagagtccaaatgattatgcatagcaatgtta 48657052  T
Q  152 tgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||| ||||| ||||||||||||| || ||||||||| |||| || ||||||    
T  48657053 tgtctcataggtctatgaatgttgtgtttacgatgattgattttgccgtccaaa 48657106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 42455692 - 42455837
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttacc 198  Q
    |||||||||| ||||||||||||||||||||| | ||||| ||| ||||||||||| | ||||||  |||||||||||  || |||  ||||  |||  |    
T  42455692 agaggttgttaaccttctacatagagttcaaatgatcatggataacaatgtcatgttttctaggtccatgaatgttgtttttacgagaattgactttgtc 42455791  T
Q  199 atccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    || |||| |||  |||| || || ||||||||||||||||||||||    
T  42455792 attcaaaaaggtttagcagcacaacttgttgctcgcttgccttcta 42455837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 46440932 - 46441045
Alignment:
Q  57 ttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||| ||| ||||||||||||||||   ||| ||||| |||| | || |||||||||||||||||| ||||||||  ||||||||||||  ||||||    
T  46440932 ttttatatcatttgcttttgacactttcggcttcctagcatcagaagctgctgaccttctacatagagtccaaagggttgtgcatagcaatgctatgtct 46441031  T
Q  157 cctaggtttatgaa 170  Q
    | |||||| |||||    
T  46441032 cataggttcatgaa 46441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 54190906 - 54190990
Alignment:
Q  69 tgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatg 153  Q
    |||||||||||||||  | ||  ||| | |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  54190906 tgcttttgacacttttgactttctagtatcagaggttgttgaccttccacatagagttcaaagggccatgcataacaatgtcatg 54190990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 50442609 - 50442707
Alignment:
Q  144 caatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttc 242  Q
    |||||| |||||||||||||| ||| |||||||| ||  || |||||||||| ||||||||| |||  ||| ||||||||||||||| |||||| ||||    
T  50442609 caatgttatgtctcctaggttcatggatgttgtgtttaagaggattggttttgccatccaaaaagggttagtggcgcagcttgttgcccgcttgtcttc 50442707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 18981651 - 18981718
Alignment:
Q  126 tcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttt 194  Q
    |||||||||||||||||| |||||||||||| ||||||  |||||||||||| || |||||||||||||    
T  18981651 tcaaagggtcatgcatagtaatgtcatgtct-ctaggtccatgaatgttgtgtttacgatgattggttt 18981718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 25504347 - 25504239
Alignment:
Q  69 tgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatg 168  Q
    ||||||||||| |||   |||| |||||| ||||  |||||||||| || |||||||| ||| |||||||||||| ||||||||||||| |||||  |||    
T  25504347 tgcttttgacatttttggtttcctagcactagagactgttgaccttttaaatagagtttaaaaggtcatgcatagtaatgtcatgtctcataggtccatg 25504248  T
Q  169 aatgttgtg 177  Q
    ||| |||||    
T  25504247 aatattgtg 25504239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 28739953 - 28739849
Alignment:
Q  73 tttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatg 172  Q
    |||||||||||| | ||| || ||||| | |||||||||||| |||||||||||||| | |  ||||||| |||||| |||||||||||||  || ||||    
T  28739953 tttgacactttcgacttcctaacaccacaagttgttgaccttttacatagagttcaacgtgcaatgcataacaatgttatgtctcctaggtccataaatg 28739854  T
Q  173 ttgtg 177  Q
    |||||    
T  28739853 ttgtg 28739849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 241
Target Start/End: Original strand, 23233211 - 23233340
Alignment:
Q  110 accttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaatagg 209  Q
    ||||||||| |||||||||| ||||||||||||  |||||||||| |||||| || |||||||||||  ||  || ||||| |||  | ||||||| |||    
T  23233211 accttctacgtagagttcaa-gggtcatgcataataatgtcatgtttcctagattcatgaatgttgtctttatgaggattgatttggctatccaaaaagg 23233309  T
Q  210 cctagcggcgcagcttgttgctcgcttgcctt 241  Q
    | |||| || ||||||||||| ||||||||||    
T  23233310 cttagcagcacagcttgttgc-cgcttgcctt 23233340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 31847071 - 31846984
Alignment:
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcct 240  Q
    |||||||||||  |||||||||||| | |||| |||| ||| | ||||||||| ||| |||||||||||| ||||||| |||||||||    
T  31847071 gtctcctaggtccatgaatgttgtgttagcgaggattcgttatgccatccaaaaaggtctagcggcgcaggttgttgcccgcttgcct 31846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 40392726 - 40392784
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||  |||||||||||||    
T  40392726 gattggttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttcta 40392784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 747853 - 747898
Alignment:
Q  98 cagaggttgttgaccttctacatagagttcaaagggtcatgcatag 143  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  747853 cagaggttgttgaccttctacatagagtttaaaaggtcatgcatag 747898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 52403963 - 52403869
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    |||||||  |||||||||||||| |||||||||||||||| | | |||| |||  |||| ||||||||| ||||||||| || ||| ||||||||||    
T  52403963 agaggttaatgaccttctacatatagttcaaagggtcatgtacaacaatatca--tctcttaggtttataaatgttgtgtttacgaagattggtttt 52403869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 12918394 - 12918483
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagt 125  Q
    |||||||||||||||||| |  ||||||||  || | |||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||    
T  12918394 gtgttctgacaatcaacaca--cttttatactatttacttttgacactttcgacttcctagcatcagagattgttgaccttctagatagagt 12918483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 53098455 - 53098403
Alignment:
Q  87 tttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgc 139  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  53098455 tttcctagcatcagaggttgttaaccttctacatagagttcaaatggtcatgc 53098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 8738203 - 8738149
Alignment:
Q  123 agttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||||||||| |||||||||  ||||||||||||| |||||| ||||||||||||    
T  8738203 agttcaaaggctcatgcataaaaatgtcatgtctcttaggttcatgaatgttgtg 8738149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 32312796 - 32312874
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||||| ||||| ||| |||| |||||||||| ||||||||||| ||||||  ||||| |||| | |||||||||||||    
T  32312796 agaggtcgttgatcttatacaaagagttcaaaaggtcatgcataacaatgtagtgtcttctagatctatgaatgttgtg 32312874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 34213636 - 34213539
Alignment:
Q  104 ttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatcc 202  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||  | |||||||| |  |||||||||||| || | | ||| |||||| ||||||    
T  34213636 ttgttgaccttctagatagagttcaaagggtcatgcctaacaatgt-gtctctcctagttccatgaatgttgtgtttacaaggatcggttttgccatcc 34213539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 46391399 - 46391474
Alignment:
Q  99 agaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||||||||||||||||||||||| |||||||| | |||||||   |||||||||||||||||  |  |||||||||||    
T  46391399 agaggttgttgaccttctacataaagttcaaaagatcatgcaa--caatgtcatgtctcctaaatccatgaatgttgt 46391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 712677 - 712722
Alignment:
Q  98 cagaggttgttgaccttctacatagagttcaaagggtcatgcatag 143  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||    
T  712677 cagaggttgttgtccttctacatagagtttaaaaggtcatgcatag 712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 1041386 - 1041307
Alignment:
Q  160 aggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgcc 239  Q
    ||||| |||||||||||| || ||||||||| |||||||||||||| |  |||| ||||| ||||| |||  ||||||||    
T  1041386 aggttcatgaatgttgtgttttcgatgattgattttaccatccaaaaaaacctaacggcgtagcttattgtccgcttgcc 1041307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 23242899 - 23242780
Alignment:
Q  122 gagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgca 221  Q
    ||||| ||||||||||||||| ||||||||| |||| |||||  || ||| ||||| || ||||||||| ||||   ||||||| ||  ||| |||| ||    
T  23242899 gagtttaaagggtcatgcataacaatgtcatttctcttaggtccataaatattgtgtttacgatgattgattttgttatccaaaaagctctaacggcaca 23242800  T
Q  222 gcttgttgctcgcttgcctt 241  Q
     ||| ||| |||||||||||    
T  23242799 acttattgttcgcttgcctt 23242780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 43849430 - 43849483
Alignment:
Q  96 accagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgt 149  Q
    |||| ||||||| || |||||||| |||||||||| ||||||||||| ||||||    
T  43849430 accaaaggttgtggatcttctacaaagagttcaaatggtcatgcataacaatgt 43849483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 9601223 - 9601087
Alignment:
Q  103 gttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatcc 202  Q
    ||||||||||||||||||| |||| |||||||| ||||     |||||||| |||||||||| || | || |||| || ||| ||||| ||||  |||||    
T  9601223 gttgttgaccttctacataaagtttaaagggtcgtgca----catgtcatgactcctaggttcataagtggtgtgtttacgaggattgattttgtcatcc 9601128  T
Q  203 aaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||| | || || ||||||| |||||||  |||||| ||||||    
T  9601127 aaa-aagcttaacggcgcaacttgttgtccgcttgtcttcta 9601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 23605100 - 23605060
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagg 132  Q
    ||||| || ||||||||||||||||| ||||||||||||||    
T  23605100 tagcatcaaaggttgttgaccttctatatagagttcaaagg 23605060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 49344198 - 49344286
Alignment:
Q  73 tttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctag 161  Q
    |||||||||||   |||| ||| |||| ||||  ||||||| ||||||| |||| |||||||||  ||||| ||||| |||||||||||    
T  49344198 tttgacacttttgttttcctaggaccaaaggtaattgacctcctacatatagtttaaagggtcactcatagaaatgtaatgtctcctag 49344286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 49354160 - 49354212
Alignment:
Q  108 tgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctccta 160  Q
    ||||||||| |||||| || ||| |||||| ||||||||||| ||||||||||    
T  49354160 tgaccttctgcatagaatttaaatggtcattcatagcaatgtaatgtctccta 49354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 6419 - 6279
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  |||| |||| ||| ||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||    
T  6419 gtgttctgacaatcaacat--gcttctataccatttgcttttgacactttcagtttcctagcaccagaggctgttgaccttctacatagagttcaaaagg 6322  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  6321 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 8e-47; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 32269819 - 32270026
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||   ||||||||| ||| ||||||||| |||||| ||||| |||||| |||||||||||||||||| |||  |||||||| ||    
T  32269819 gtgttctgacaatcaacac--gcttttataccatttgcttttgatactttcgatttcctagcactagaggttgttgaccttctgcatgaagttcaaaagg 32269916  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||||||||||||||  |||||||||||| || ||| ||||| |||  ||||||||| | || |||||| |||||||||| | ||    
T  32269917 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttcgccatccaaaaaagcatagcgg-gcagcttgttacccg 32270015  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  32270016 cttgccttcta 32270026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 42921782 - 42921575
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||| ||||||||||  |||| |||||||||||||||||| |||||||||||||||||| | ||    
T  42921782 gtgttctgacaatcaacat--gcttttataccatttgcttatgacactttcggtttcctagcaccagaggttgttggccttctacatagagttcagaagg 42921685  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| ||||||||||||||||| ||  || ||| ||||| || | | |||||||||| ||||||||| ||  |||||||||||||||||| | |     
T  42921684 tcatgcataacaatgtcatgtctcctaagtccat-aatattgtgtttacaaggattggttttgccatccaaaaagatctagcggcgcagcttgtttccca 42921586  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  42921585 cttgccttcta 42921575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 34 - 228
Target Start/End: Original strand, 37873660 - 37873852
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| |||||||||||||||    ||| ||||||||||||||||||||||||||||||||||||||||||    
T  37873660 gtgttctgacaatcaacatgt--ttttataccatttgcttttgacacttttggcttcctagcaccagaggttgttgaccttctacatagagttcaaaggg 37873757  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    ||||||| | |||||||||| || |||||| ||||||||||||| ||  || ||||| |||| | ||| ||| ||||||||||| ||| ||||||    
T  37873758 tcatgcagaacaatgtcatgacttctaggtctatgaatgttgtgtttaagaggattgattttgctatcaaaaaaggcctagcggtgcaacttgtt 37873852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 35310532 - 35310329
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||   ||| | ||| |||||| |||| |||||||||||||||| ||||||||    
T  35310532 tgttctgacaatcaacat--gcttttataccatctgcttttgacactttcggcttcctggcatcagaggctgttaaccttctacatagagtccaaagggt 35310435  T
Q  135 catgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgc 234  Q
      |||||| |||||| |||||||||||||  |||||||||||| || |||  ||||||||| ||||||||| |||  || || ||||||||||||| |||    
T  35310434 tttgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatccaaagaggtttaacgacgcagcttgttgcccgc 35310335  T
Q  235 ttgcct 240  Q
    ||||||    
T  35310334 ttgcct 35310329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 13166932 - 13167136
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||   ||| ||||| |||||  ||||||||||||||||||||| |||||||    
T  13166932 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttcggcttcctagcatcagagactgttgaccttctacatagagtccaaaggg 13167029  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | |||||||||||||  |||||||||||||  |||||||||| | || ||||||||| || |   ||||||| ||  |||||||||||||||||||| |     
T  13167030 ttatgcatagcaatggtatgtctcctaggtccatgaatgttgggtttacgatgattgattctgttatccaaaaagatctagcggcgcagcttgttgccca 13167129  T
Q  234 cttgcct 240  Q
    |||||||    
T  13167130 cttgcct 13167136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 25663054 - 25663258
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||| ||||||||| |  ||||||| ||| |||||||||||||||||  ||| ||||| |||| |||||||| |||||||||||||| |||||||    
T  25663054 gtgttctgataatcaacatgt--ttttataccatttgcttttgacactttcagcttcctagcatcagaagttgttgatcttctacatagagtccaaaggg 25663151  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | ||||||| |||||| ||||| |||||||  |||||||||| | || ||| |||||| |||  |||||||| ||| ||| || ||||||||||||||||    
T  25663152 ttatgcatatcaatgttatgtcccctaggtccatgaatgttgagtttacgaggattggctttgtcatccaaaaaggtctaacgacgcagcttgttgctcg 25663251  T
Q  234 cttgcct 240  Q
     ||||||    
T  25663252 tttgcct 25663258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 35 - 227
Target Start/End: Complemental strand, 430686 - 430496
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    ||||||||||||||||||  ||||||||| ||| |||||||||||||||    ||| ||||| ||||||  |||||||||||||||||| | ||||||||    
T  430686 tgttctgacaatcaacat--gcttttataccatttgcttttgacacttttgtcttcatagcatcagaggcagttgaccttctacatagattccaaagggt 430589  T
Q  135 catgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgt 227  Q
     |||||||| ||||| |||||||||||||  |||||||||||| || ||| ||||| || | ||||||||| ||| ||| ||| |||||||||    
T  430588 tatgcatagtaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattatgccatccaaaaaggtctatcggtgcagcttgt 430496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 22188713 - 22188846
Alignment:
Q  72 ttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaat 171  Q
    ||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| || ||||||    
T  22188713 ttttgacactttcgattttttagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatatcatgtctcctagattcatgaat 22188812  T
Q  172 gttgtgcttgcgatgattggttttaccatccaaa 205  Q
    |||||| || |||  |||||||||  ||||||||    
T  22188813 gttgtgtttacgagaattggttttgtcatccaaa 22188846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 33692077 - 33692278
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| |||||||||||||  |||||| || ||| ||||||||||||||||   ||| ||||| |||||  |||||||||||||||||| || |||||||    
T  33692077 gtgttatgacaatcaacat--gcttttgtaccatttgcttttgacactttcggcttcttagcatcagagactgttgaccttctacatagtgtccaaaggg 33692174  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    | ||||||| |||||| ||||||| |||||| ||||||||| || || ||||  |||||||| ||||||||| ||  ||||||||||||||||||||  |    
T  33692175 t-atgcataacaatgttatgtctcataggttcatgaatgttctgtttacgat--ttggtttttccatccaaaaagatctagcggcgcagcttgttgcctg 33692271  T
Q  234 cttgcct 240  Q
    |||||||    
T  33692272 cttgcct 33692278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 113 - 241
Target Start/End: Original strand, 2566194 - 2566322
Alignment:
Q  113 ttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcct 212  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |  || ||||||||| || ||| ||||| |||| ||||||||| ||| ||    
T  2566194 ttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatcaatgttgtgtttacgaggattgattttgccatccaaaaaggtct 2566293  T
Q  213 agcggcgcagcttgttgctcgcttgcctt 241  Q
    ||||||||| |||||||| | ||||||||    
T  2566294 agcggcgcaacttgttgcccacttgcctt 2566322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 38875723 - 38875567
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  |||| || ||| || ||||||||||||||  ||| |||||||||||| || ||||||||||| ||||||||||| ||    
T  38875723 gtgttctgacaatcaacatgt--ttttgtaccatttgtttttgacactttcagcttcctagcaccagaggctgctgaccttctacgtagagttcaaaagg 38875626  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtt 193  Q
    ||||||||| ||||||| ||||||||||||  ||| |||||||| || ||||||||||||    
T  38875625 tcatgcataacaatgtcttgtctcctaggtcaatg-atgttgtgtttacgatgattggtt 38875567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 53 - 229
Target Start/End: Complemental strand, 8100620 - 8100446
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||||||||| ||| || || |||||||||||| ||| |  ||| |||||||||||||||||||| ||||||| ||||  ||||||||| |||||||||    
T  8100620 atgcttttataccatttgtttgtgacactttcaacttccttccactagaggttgttgaccttctacgtagagtttaaagattcatgcatatcaatgtcat 8100521  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttg 229  Q
    |||| ||||| |  | ||||||||  |||||||||||| |||| ||||||||| | |||||| ||||||||||||||    
T  8100520 gtcttctagg-tcgtaaatgttgt-tttgcgatgattgattttgccatccaaaaaagcctagtggcgcagcttgttg 8100446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 15292048 - 15292255
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  |||||||  || || |||| ||||||| | |||  |||||| ||||||| |||| |||||||| | |||||||| ||    
T  15292048 gtgttctgacaatcaacatgt--ttttatacaatttgttttttacacttttagttttctagcactagaggttattgatcttctacaaa-agttcaaaagg 15292144  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||||||||||||  ||||||||||  |||||||||||| ||  || ||||| |||| ||||||||| | || | ||||||||| ||||||| |     
T  15292145 tcatgcatagcaatgtcacatctcctaggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaaagcttggcggcgcagtttgttgccca 15292244  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  15292245 cttgccttcta 15292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 15506721 - 15506843
Alignment:
Q  120 tagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcg 219  Q
    ||||||| ||| ||| ||| ||||||||||||||||||||||   || |||||||||| || ||| ||||| |||||||||| ||| ||||||| |||||    
T  15506721 tagagtttaaaaggttatgtatagcaatgtcatgtctcctagacctacgaatgttgtgtttacgaggattgattttaccatcaaaaaaggcctaacggcg 15506820  T
Q  220 cagcttgttgctcgcttgccttc 242  Q
    || ||||||||||| ||||||||    
T  15506821 caacttgttgctcgtttgccttc 15506843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 34335422 - 34335297
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||| ||||||||||||||  ||||||||| ||| || ||||||||||||| | ||  |  ||||||||| ||||||||||||||||||||||||| ||     
T  34335422 gtgtcctgacaatcaacat--gcttttataccatttgtttttgacactttcgactttctgacaccagaggctgttgaccttctacatagagttcaacgga 34335325  T
Q  134 tcatgcatagcaatgtcatgtctcctag 161  Q
    |||||| || |||| |||||||||||||    
T  34335324 tcatgcgtaacaatctcatgtctcctag 34335297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 69 - 244
Target Start/End: Original strand, 23423926 - 23424101
Alignment:
Q  69 tgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatg 168  Q
    |||||||||||||||||| ||| || || || | ||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||  | |||     
T  23423926 tgcttttgacactttcaacttcctaacatcaaatgttgttgaccttctacatagatttcaaaggatcattcattgcaatgtcatgtatcctacttctatc 23424025  T
Q  169 aatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||| ||||| ||  || ||||| ||||  |||||||| | | ||| ||| |||||||| | |||| ||||||||||    
T  23424026 aatattgtgtttatgaagattgattttgtcatccaaaaatgtctatcggtgcagcttgattctcgtttgccttcta 23424101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 23023591 - 23023495
Alignment:
Q  125 ttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgca 221  Q
    |||||| ||||||||||| ||||||||||||||||||||  |||||||||||| || ||| ||||| ||||  |||||||| |||||||| ||||||    
T  23023591 ttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcgatgaatgttgtgtttacgaagattgattttgtcatccaaaaaggcctaggggcgca 23023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 26212608 - 26212745
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||| ||||||||  ||||||||| ||| || |||| || |||||| |||| |||||||||||| | || |||||||||||||||||||||  ||||    
T  26212608 ttctgacgatcaacat--gcttttataccatttgttttttaccctttcagtttcttagcaccagaggctattaaccttctacatagagttcaaaatgtca 26212705  T
Q  137 tgcatagcaatgtcatgtctcctaggtttatgaatgttgt 176  Q
    || || ||||| | |||||||||| ||  |||||||||||    
T  26212706 tgtatggcaatattatgtctcctaagtccatgaatgttgt 26212745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 14423763 - 14423643
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||||||    || ||||| |||||| ||||||||||||||||||||||   | ||    
T  14423763 gtgttctgacaatcaacat--gcttttataccatttgcttttgacactttc----tcctagcatcagaggctgttgaccttctacatagagtt---aagg 14423673  T
Q  134 tcatgcatagcaatgtcatgtctcctaggt 163  Q
    | || |||| |||||||||||||| |||||    
T  14423672 taattcataacaatgtcatgtctcttaggt 14423643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 27336778 - 27336594
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||||  |||||||| ||| ||||||||||||||     ||| ||||| ||||||  |||||||||||||||||||   ||| ||    
T  27336778 gtgttctgacaatcaacata--cttttataccatttgcttttgacacttgtggcttcctagcatcagaggcagttgaccttctacatagaga--aaatgg 27336683  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcag 222  Q
    | ||| |||||||||| |||||||||| ||  |||||||||||  || | | ||||| |||| ||||| ||| ||| ||||||| ||||    
T  27336682 ttatgtatagcaatgttatgtctcctaagtccatgaatgttgtttttacaaggattgattttgccatcaaaaaaggtctagcggtgcag 27336594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 11005813 - 11005757
Alignment:
Q  186 gattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttc 242  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||    
T  11005813 gattggttttgccatccaaaaaggcttagcggcgcagcttgttgcccgcttgccttc 11005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 43115479 - 43115583
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||| |||||||||||||  ||||| ||| ||| ||||||||||||||   | |||||| |||||||| ||||||||||||||| ||||||| ||| |     
T  43115479 gtgttttgacaatcaacat--gctttcatagcatttgcttttgacacttctgacttcgtaacaccagagattgttgaccttctacgtagagtttaaatga 43115576  T
Q  134 tcatgca 140  Q
    |||||||    
T  43115577 tcatgca 43115583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 15833107 - 15833010
Alignment:
Q  73 tttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatg 172  Q
    |||||||||||  | ||| |||||||||| ||||||||   |||| |||||||||||| ||||||| ||| |||||||| ||||||||| || |||||||    
T  15833107 tttgacacttttgacttcctagcaccagatgttgttga---tctatatagagttcaaatggtcatgtataacaatgtcacgtctcctagattcatgaatg 15833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 19260324 - 19260230
Alignment:
Q  101 aggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggtttt 195  Q
    ||||| |||||||||||| |||||||||||||||||| |||| |||||| ||||||  ||  || ||||||||| || || |||||||| |||||    
T  19260324 aggttattgaccttctacttagagttcaaagggtcatacataacaatgtaatgtcttatatattcatgaatgttatgtttacgatgatttgtttt 19260230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 43129619 - 43129524
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaag 131  Q
    ||||||||||||||||||| |  |||| || ||| ||||||||||| ||||  |||| || ||||||| ||| ||||||||||||| |||||||||||    
T  43129619 gtgttctgacaatcaacatgt--ttttctaccatttgcttttgacattttcggtttcctaacaccagatgtttttgaccttctacagagagttcaaag 43129524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 41343516 - 41343581
Alignment:
Q  92 tagcaccagaggttgttgaccttctacat-agagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||||||||| |||| ||||||||    
T  41343516 tagcaccagaggttgttggccttctacataatagttcaaaggatcatgcataacaatatcatgtct 41343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 14723269 - 14723382
Alignment:
Q  37 ttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    ||||||||||||||||  ||||||||| ||| || |||| |||||||   |||  ||||| ||||||||||||||||| ||| || ||||||||  ||||    
T  14723269 ttctgacaatcaacat--gcttttatatcatttgttttttacacttttggttttttagcatcagaggttgttgaccttatacttaaagttcaaaatgtca 14723366  T
Q  137 tgcatagcaatgtcat 152  Q
    |||||| |||| ||||    
T  14723367 tgcataacaatatcat 14723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 27294467 - 27294423
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtca 136  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  27294467 tagcaccagaggttgttgaccttctacatatagttcaaatggtca 27294423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 16017173 - 16017126
Alignment:
Q  121 agagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatg 168  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||    
T  16017173 agagttcaaaaggtcatgcatagcaatgttgtgtctcctaggtttatg 16017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 15810081 - 15810008
Alignment:
Q  87 tttcgtagcaccagaggttgttgaccttctacatagagttcaaag-ggtcatgcatagcaatgtcatgtctcctagg 162  Q
    |||| |||||| |||||||||||||||   | ||||||||||||  ||||||| |||||||||||||||||||||||    
T  15810081 tttcctagcacgagaggttgttgacct---atatagagttcaaaatggtcatgtatagcaatgtcatgtctcctagg 15810008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 7716210 - 7716146
Alignment:
Q  92 tagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtct 156  Q
    ||||||||||||||||||  ||| |||||| |||||||||| | ||||||| |||| ||||||||    
T  7716210 tagcaccagaggttgttggtcttttacataaagttcaaaggattatgcataacaatatcatgtct 7716146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 16598932 - 16598893
Alignment:
Q  95 caccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  16598932 caccaaaggatgttgaccttctacatagagttcaaagggt 16598893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 27913561 - 27913507
Alignment:
Q  189 tggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||||||||||||  |  ||||||||||||||||||||| |||||||||||||    
T  27913561 tggttttaccatccaacaaa-cctagcggcgcagcttgttgcccgcttgccttcta 27913507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 3114247 - 3114303
Alignment:
Q  121 agagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 177  Q
    |||||||||||||||||||| | |||||||||  |||| |||| | |||||||||||    
T  3114247 agagttcaaagggtcatgcacaacaatgtcataactccaaggtctgtgaatgttgtg 3114303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 33335 - 33127
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||||| |  ||||||| ||| | ||||||||| ||||  |||| || |||||||||||||||||||||||||||||||||||| ||    
T  33335 gtgttctgacaatcaacatgt--ttttataccatttacttttgacattttcggtttcctaacaccagaggttgttgaccttctacatagagttcaaaagg 33238  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    |||||||||||||| | |||||||||||||  ||||| || ||| || ||| ||||| ||||  |||||||| |||| | |||| ||||||||||||  |    
T  33237 tcatgcatagcaattttatgtctcctaggtccatgaacgtcgtgtttacgaggattgattttgtcatccaaaaaggcttggcggtgcagcttgttgcctg 33138  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  33137 cttgccttcta 33127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 53 - 244
Target Start/End: Original strand, 223 - 414
Alignment:
Q  53 atgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcat 152  Q
    ||||||||||| ||| ||  |||||||||||   |||  ||| |||| |||||||||||||||| |||| ||||||||  ||||| ||||||||||||||    
T  223 atgcttttataccatttgtgtttgacacttttggttttctagtaccaaaggttgttgaccttctgcataaagttcaaaaagtcatacatagcaatgtcat 322  T
Q  153 gtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||||| |  ||||| |||||| || ||| |||| ||||| ||||||||| |||| | | |||||| ||||||||  |||| |||||||    
T  323 gtctcctagatcgatgaacgttgtgtttacgaggattagttttgccatccaaaaaggctttgtggcgcatcttgttgccggctttccttcta 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 7687 - 7496
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| |||||||||||  | ||||| | ||| ||||||||||||||||| |||| |||| |||||| ||||||||||| | ||||| ||||||| ||    
T  7687 gtgttctcacaatcaacat--gattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcatagcgttcaaaagg 7590  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgtt 228  Q
    |||||||||  ||||||||||||| |||||  ||||||||| || || |||  |||||||||  |||||||| ||  ||| |||| |||||||||    
T  7589 tcatgcata-taatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtcatccaaaaagatctaacggcacagcttgtt 7496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 49496 - 49292
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||||||||||||| |  ||||||||| ||| |||||||||||||||| | ||| || ||||| ||||||  |    || ||||||||||||||||     
T  49496 gtgttctgacaatcaacgt--gcttttataccatttgcttttgacactttcgacttcttaacaccaaaggttgagg----tcaacatagagttcaaagga 49403  T
Q  134 tcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgatgattggttttaccatccaaataggcctagcggcgcagcttgttgctcg 233  Q
    ||||||||| |||||||||||||| || ||  |||||||| ||  || |||  |||| |||| ||||| |||  || ||||||||||| ||||||||| |    
T  49402 tcatgcataacaatgtcatgtctcttatgtccatgaatgtagtatttacgagaattgatttttccatctaaaacggtctagcggcgcaacttgttgctag 49303  T
Q  234 cttgccttcta 244  Q
    |||||||||||    
T  49302 cttgccttcta 49292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 10454 - 10329
Alignment:
Q  29 aatgggtgttctgacaatcaac--atatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagtt 126  Q
    |||| ||||||||||||||||   | ||||||||||| ||| ||||||||||||||     ||| |||||||||||||||||||||||||| ||||||||    
T  10454 aatgcgtgttctgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggcttcctagcaccagaggttgttgaccttcta-atagagtt 10356  T
Q  127 caaagggtcatgcatagcaatgtcatg 153  Q
     |||||| |||||||| ||||||||||    
T  10355 gaaagggccatgcataacaatgtcatg 10329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 18386 - 18499
Alignment:
Q  34 gtgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaaggg 133  Q
    ||||||| ||||||||||| |  ||||||  |||||||||||||||||||  |||||  ||||  |||| ||||| ||||||||||||||||| ||||||    
T  18386 gtgttctcacaatcaacatgt--ttttatgtcatctgcttttgacacttttgatttccaagcagtagagattgttaaccttctacatagagtttaaaggg 18483  T
Q  134 tcatgcatagcaatgt 149  Q
    ||||||| ||||||||    
T  18484 tcatgcagagcaatgt 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 16139 - 16068
Alignment:
Q  87 tttcgtagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcct 159  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  16139 tttcctagcacca-aggttattgactttctacatagagttcaaagggtcatgcatagtaatatcatgtttcct 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 6822 - 6765
Alignment:
Q  187 attggttttaccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||||| |||||||||||||    
T  6822 attggttttgccatccaaaaaggtctagcgccgcagcttgttgcccgcttgccttcta 6765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 5248 - 5201
Alignment:
Q  197 ccatccaaataggcctagcggcgcagcttgttgctcgcttgccttcta 244  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| |||||    
T  5248 ccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcattcta 5201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 8539 - 8644
Alignment:
Q  35 tgttctgacaatcaacatatgcttttataacatctgcttttgacactttcaatttcgtagcaccagaggttgttgaccttctacatagagttcaaagggt 134  Q
    |||||||||||||||||| |  ||||||| ||| ||| ||| |||||||   |||| |||||| |||||||||  | ||||| || |||||||||||  |    
T  8539 tgttctgacaatcaacatgt--ttttataccatttgcgtttaacacttttggtttcctagcactagaggttgtgaatcttctgcaaagagttcaaagact 8636  T
Q  135 catgcata 142  Q
    ||||||||    
T  8637 catgcata 8644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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