View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5409_high_7 (Length: 250)

Name: NF5409_high_7
Description: NF5409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5409_high_7
NF5409_high_7
[»] chr5 (45 HSPs)
chr5 (111-228)||(40133383-40133500)
chr5 (113-238)||(36860423-36860548)
chr5 (112-238)||(21088816-21088942)
chr5 (112-228)||(36866761-36866877)
chr5 (141-228)||(699178-699265)
chr5 (115-238)||(5837557-5837680)
chr5 (128-238)||(1429195-1429305)
chr5 (128-238)||(5112363-5112473)
chr5 (113-238)||(8741936-8742062)
chr5 (115-228)||(26268076-26268189)
chr5 (115-227)||(27318548-27318660)
chr5 (113-228)||(19119859-19119974)
chr5 (153-228)||(30969384-30969459)
chr5 (109-219)||(15724486-15724596)
chr5 (143-228)||(9200263-9200348)
chr5 (104-223)||(22255172-22255292)
chr5 (112-228)||(5829896-5830016)
chr5 (112-223)||(7693229-7693340)
chr5 (145-228)||(24886136-24886219)
chr5 (113-223)||(39572819-39572929)
chr5 (141-238)||(22019660-22019757)
chr5 (141-238)||(22980821-22980918)
chr5 (111-223)||(23116287-23116399)
chr5 (145-228)||(14919588-14919671)
chr5 (153-223)||(17158095-17158165)
chr5 (114-228)||(32563150-32563264)
chr5 (115-228)||(25500986-25501099)
chr5 (111-228)||(35511537-35511654)
chr5 (104-208)||(13956425-13956529)
chr5 (114-222)||(31705677-31705785)
chr5 (113-208)||(12910350-12910445)
chr5 (115-228)||(7208923-7209037)
chr5 (113-223)||(22974147-22974257)
chr5 (141-223)||(31786711-31786793)
chr5 (155-228)||(11898044-11898117)
chr5 (113-230)||(38528294-38528411)
chr5 (174-222)||(6824547-6824595)
chr5 (174-238)||(25668710-25668774)
chr5 (117-228)||(8436970-8437081)
chr5 (113-228)||(35826543-35826658)
chr5 (128-199)||(35933917-35933988)
chr5 (141-238)||(27330334-27330429)
chr5 (153-223)||(28416592-28416662)
chr5 (174-220)||(42342794-42342840)
chr5 (110-190)||(16004474-16004555)
[»] chr6 (15 HSPs)
chr6 (115-238)||(21017171-21017294)
chr6 (113-223)||(3880013-3880123)
chr6 (113-228)||(8513233-8513348)
chr6 (113-223)||(4318897-4319007)
chr6 (113-223)||(5627391-5627501)
chr6 (107-223)||(1945827-1945944)
chr6 (115-238)||(6088910-6089033)
chr6 (153-228)||(33893071-33893146)
chr6 (153-223)||(15491655-15491725)
chr6 (128-231)||(29182178-29182281)
chr6 (145-223)||(7055289-7055367)
chr6 (111-223)||(6091257-6091368)
chr6 (115-238)||(30353417-30353540)
chr6 (104-230)||(7235101-7235227)
chr6 (128-228)||(18498448-18498549)
[»] chr7 (38 HSPs)
chr7 (112-238)||(4582893-4583019)
chr7 (113-228)||(43686016-43686130)
chr7 (112-228)||(37109846-37109962)
chr7 (113-223)||(7334769-7334879)
chr7 (113-238)||(32432432-32432552)
chr7 (113-238)||(32821114-32821239)
chr7 (113-221)||(17842664-17842772)
chr7 (114-238)||(43925081-43925202)
chr7 (141-228)||(29173543-29173630)
chr7 (114-223)||(38258521-38258630)
chr7 (112-228)||(12165726-12165842)
chr7 (111-238)||(5657542-5657669)
chr7 (113-223)||(18797304-18797412)
chr7 (128-223)||(23111180-23111275)
chr7 (141-228)||(26980326-26980413)
chr7 (145-228)||(27421450-27421533)
chr7 (145-228)||(30055534-30055617)
chr7 (153-238)||(6546534-6546619)
chr7 (113-238)||(21991611-21991736)
chr7 (147-227)||(9355898-9355978)
chr7 (112-242)||(27283718-27283848)
chr7 (128-228)||(31520794-31520894)
chr7 (111-238)||(8861258-8861385)
chr7 (104-242)||(12390687-12390825)
chr7 (128-238)||(22687229-22687339)
chr7 (145-223)||(38053493-38053571)
chr7 (155-219)||(34362228-34362292)
chr7 (128-228)||(37347012-37347112)
chr7 (111-229)||(10359284-10359402)
chr7 (141-223)||(24211744-24211826)
chr7 (145-238)||(31579125-31579223)
chr7 (129-238)||(44413440-44413550)
chr7 (128-242)||(48928621-48928734)
chr7 (153-229)||(10481619-10481696)
chr7 (141-242)||(48928354-48928454)
chr7 (115-179)||(8299192-8299256)
chr7 (113-222)||(26524404-26524513)
chr7 (153-208)||(37704182-37704238)
[»] chr2 (30 HSPs)
chr2 (107-238)||(4166916-4167047)
chr2 (110-223)||(33551079-33551192)
chr2 (141-228)||(13711492-13711579)
chr2 (113-242)||(4264151-4264280)
chr2 (128-228)||(39167451-39167551)
chr2 (145-228)||(27350026-27350109)
chr2 (115-228)||(3176941-3177054)
chr2 (111-228)||(19313850-19313967)
chr2 (112-223)||(44913661-44913772)
chr2 (128-223)||(26357592-26357687)
chr2 (145-228)||(37905740-37905823)
chr2 (141-223)||(19289416-19289498)
chr2 (109-223)||(35958905-35959019)
chr2 (174-238)||(5881600-5881664)
chr2 (145-228)||(43770927-43771010)
chr2 (146-228)||(4478402-4478484)
chr2 (141-223)||(11366474-11366556)
chr2 (113-223)||(17071830-17071940)
chr2 (128-198)||(18494386-18494456)
chr2 (146-228)||(43648333-43648415)
chr2 (113-238)||(29242216-29242341)
chr2 (171-228)||(33902124-33902181)
chr2 (115-228)||(36641988-36642101)
chr2 (141-223)||(41463943-41464025)
chr2 (174-223)||(4763692-4763741)
chr2 (113-222)||(17054190-17054299)
chr2 (143-228)||(31570822-31570907)
chr2 (155-228)||(33660456-33660529)
chr2 (153-238)||(33709310-33709395)
chr2 (144-228)||(19424716-19424800)
[»] chr8 (27 HSPs)
chr8 (128-228)||(9864162-9864262)
chr8 (107-228)||(12876102-12876223)
chr8 (113-238)||(36695032-36695157)
chr8 (113-230)||(40862418-40862536)
chr8 (112-223)||(10555283-10555394)
chr8 (111-238)||(6098584-6098711)
chr8 (112-242)||(13307621-13307751)
chr8 (110-228)||(23854507-23854625)
chr8 (113-228)||(1204926-1205041)
chr8 (113-228)||(16446951-16447066)
chr8 (128-223)||(37970600-37970695)
chr8 (141-223)||(8803891-8803973)
chr8 (113-223)||(41362517-41362624)
chr8 (145-223)||(30654664-30654742)
chr8 (113-238)||(38643977-38644102)
chr8 (113-228)||(1150181-1150296)
chr8 (145-228)||(11727055-11727138)
chr8 (145-228)||(31933962-31934045)
chr8 (113-228)||(34952107-34952222)
chr8 (128-238)||(465856-465966)
chr8 (113-223)||(43643676-43643786)
chr8 (112-228)||(5300022-5300138)
chr8 (113-228)||(16222862-16222977)
chr8 (113-228)||(27082914-27083029)
chr8 (113-228)||(34894966-34895081)
chr8 (174-223)||(1149713-1149762)
chr8 (153-211)||(43025741-43025799)
[»] chr3 (35 HSPs)
chr3 (128-228)||(34132941-34133041)
chr3 (107-228)||(4015445-4015566)
chr3 (113-238)||(35844317-35844442)
chr3 (128-228)||(24489032-24489132)
chr3 (141-238)||(29099374-29099471)
chr3 (128-228)||(3655272-3655372)
chr3 (112-228)||(51213051-51213167)
chr3 (115-238)||(46297822-46297945)
chr3 (145-238)||(44186561-44186654)
chr3 (116-223)||(22446140-22446247)
chr3 (112-228)||(37203057-37203173)
chr3 (146-226)||(47481546-47481626)
chr3 (113-228)||(40552329-40552444)
chr3 (141-220)||(54505827-54505906)
chr3 (145-223)||(2007956-2008034)
chr3 (113-223)||(48354932-48355042)
chr3 (107-228)||(21193591-21193712)
chr3 (112-228)||(37157698-37157813)
chr3 (145-228)||(4761719-4761802)
chr3 (179-238)||(11466881-11466940)
chr3 (145-223)||(3362276-3362354)
chr3 (141-238)||(7327542-7327640)
chr3 (145-223)||(20373371-20373449)
chr3 (174-223)||(21009877-21009926)
chr3 (153-242)||(33378841-33378930)
chr3 (152-225)||(43975961-43976034)
chr3 (128-203)||(2613896-2613971)
chr3 (113-228)||(26941330-26941445)
chr3 (110-199)||(44891495-44891583)
chr3 (174-238)||(14586730-14586794)
chr3 (128-228)||(40935997-40936097)
chr3 (184-228)||(42506145-42506189)
chr3 (113-179)||(55343403-55343469)
chr3 (128-228)||(11357434-11357535)
chr3 (153-197)||(33698219-33698263)
[»] chr4 (39 HSPs)
chr4 (115-238)||(17167715-17167838)
chr4 (115-238)||(17173292-17173415)
chr4 (113-218)||(4205116-4205221)
chr4 (115-224)||(27396618-27396727)
chr4 (114-223)||(37775670-37775779)
chr4 (111-238)||(49375964-49376092)
chr4 (113-223)||(9139247-9139355)
chr4 (113-238)||(35021121-35021246)
chr4 (113-223)||(34361592-34361702)
chr4 (111-229)||(39397916-39398034)
chr4 (141-230)||(54499332-54499422)
chr4 (143-228)||(19089549-19089634)
chr4 (141-238)||(32592121-32592218)
chr4 (128-228)||(25701153-25701253)
chr4 (115-238)||(36493774-36493897)
chr4 (111-238)||(55241190-55241317)
chr4 (128-238)||(30002710-30002820)
chr4 (141-238)||(7703545-7703642)
chr4 (113-223)||(25184113-25184223)
chr4 (113-223)||(32912681-32912791)
chr4 (145-223)||(37287766-37287844)
chr4 (145-238)||(879634-879727)
chr4 (115-228)||(47253751-47253863)
chr4 (128-228)||(34948193-34948293)
chr4 (184-228)||(37663837-37663881)
chr4 (141-228)||(4598021-4598107)
chr4 (155-238)||(23761114-23761197)
chr4 (141-238)||(29584286-29584381)
chr4 (128-238)||(35025674-35025784)
chr4 (113-223)||(50697242-50697352)
chr4 (113-198)||(4396326-4396411)
chr4 (111-228)||(28003082-28003199)
chr4 (174-223)||(50764791-50764840)
chr4 (109-228)||(19440744-19440864)
chr4 (128-228)||(46888253-46888353)
chr4 (113-220)||(3042611-3042718)
chr4 (113-228)||(55477987-55478106)
chr4 (167-223)||(4934303-4934360)
chr4 (153-238)||(33816619-33816704)
[»] scaffold0002 (2 HSPs)
scaffold0002 (113-228)||(134-249)
scaffold0002 (136-224)||(94457-94545)
[»] chr1 (34 HSPs)
chr1 (115-238)||(238568-238690)
chr1 (110-228)||(15752022-15752140)
chr1 (128-228)||(47279200-47279300)
chr1 (141-228)||(11742415-11742502)
chr1 (112-223)||(38823209-38823320)
chr1 (113-223)||(1547283-1547393)
chr1 (145-223)||(10922755-10922833)
chr1 (141-223)||(32267058-32267140)
chr1 (109-223)||(42721031-42721145)
chr1 (153-238)||(48620673-48620758)
chr1 (113-228)||(2959744-2959859)
chr1 (136-223)||(9903124-9903211)
chr1 (113-228)||(18422647-18422762)
chr1 (142-228)||(51128884-51128970)
chr1 (111-238)||(27267254-27267378)
chr1 (136-228)||(28564846-28564938)
chr1 (141-200)||(7079167-7079226)
chr1 (113-228)||(10182073-10182188)
chr1 (141-228)||(30254448-30254534)
chr1 (145-223)||(23999375-23999453)
chr1 (113-238)||(15382929-15383054)
chr1 (171-228)||(21289726-21289783)
chr1 (153-238)||(32216091-32216176)
chr1 (128-228)||(37451297-37451397)
chr1 (141-223)||(27533050-27533132)
chr1 (153-242)||(3534968-3535057)
chr1 (141-223)||(37618964-37619048)
chr1 (113-238)||(39393379-39393504)
chr1 (128-223)||(47682564-47682658)
chr1 (104-223)||(3309135-3309253)
chr1 (113-223)||(16415641-16415752)
chr1 (113-228)||(34012442-34012557)
chr1 (113-223)||(19899839-19899949)
chr1 (112-228)||(30327017-30327133)
[»] scaffold0022 (1 HSPs)
scaffold0022 (115-223)||(146091-146199)
[»] scaffold0291 (1 HSPs)
scaffold0291 (141-228)||(7915-8002)
[»] scaffold0061 (1 HSPs)
scaffold0061 (142-228)||(43986-44072)
[»] scaffold0017 (1 HSPs)
scaffold0017 (142-228)||(154715-154801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (153-204)||(42388-42439)


Alignment Details
Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 40133383 - 40133500
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | |||||||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40133383 atggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaat 40133482  T
Q  211 gacatcaaaagtttagtc 228  Q
    | ||||||||||| ||||    
T  40133483 ggcatcaaaagttcagtc 40133500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 36860423 - 36860548
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||||||| ||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36860423 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaatga 36860522  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| |||| || ||||||    
T  36860523 catcaaaagttcagtccccatagtat 36860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 21088942 - 21088816
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||   |||||||||||| |||||||||| | ||||||||| | | |||||||||||||||||||||| |||||||||| ||||||||||    
T  21088942 tggaaaattctacgatgaagtcacgaaaatgactttttttggtgaagttaa-actgtagtataaaaaatgttgtgagtgacaccccactgtttgtacaat 21088844  T
Q  211 gacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||||| |||| || ||||||    
T  21088843 gacatcaaaagttcagtccccatagtat 21088816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 36866761 - 36866877
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | |||||||||||| ||| |||| || ||||||||||| |||| ||| |||||| ||||||||||||||||||| |||||||||||    
T  36866761 tggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatg 36866860  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  36866861 gcatcaaaagttcagtc 36866877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 699178 - 699265
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||| || ||||||||||| ||||| ||||||||| | ||||||||||||||||| |||||||| |||||||||||||| ||||    
T  699178 tgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtc 699265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 5837557 - 5837680
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||| | ||| ||| || | |||||||| || ||||| ||||| ||||| || |||| ||||||||||||||||||||| |||||||| |||||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    |||||| || ||||||| ||||||    
T  5837657 tcaaaatttcagtctccatagtat 5837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 1429305 - 1429195
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| |||| ||||| ||||| ||||||||||| ||||| || |||||| | ||||||||||||||||| |||||||| || |||||||| || |||    
T  1429305 gaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactggcatcaaaaattcagt 1429206  T
Q  228 ctccgtagtat 238  Q
    |||| ||||||    
T  1429205 ctccatagtat 1429195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 5112473 - 5112363
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| |||| ||||||||||| ||||||||| | ||||  ||||||||| | ||||||||||||||||| |||||||| || ||||||||||| |||    
T  5112473 gaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagtggcatcaaaagttcagt 5112374  T
Q  228 ctccgtagtat 238  Q
    | || ||||||    
T  5112373 ccccatagtat 5112363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 8742062 - 8741936
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatg 211  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| |||||||||||||| ||||| | |||||||||||    
T  8742062 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaatg 8741963  T
Q  212 acatcaaaagtttagtctccgtagtat 238  Q
     ||||||||||| ||||||| ||||||    
T  8741962 gcatcaaaagttcagtctccatagtat 8741936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 26268076 - 26268189
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||| | ||||||| || | ||| |||| || ||||||||||| ||||| || |||| |||| |||||||||||||||| |||||||  |||||    
T  26268076 aaaattctacagtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgaca 26268175  T
Q  215 tcaaaagtttagtc 228  Q
    ||||||||||||||    
T  26268176 tcaaaagtttagtc 26268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 27318660 - 27318548
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    ||||||| || | ||||||| || | ||| |||| || ||||||||||| || |  ||||||||||| ||||||||||| ||||| ||||||||||||||    
T  27318660 aaaattcaacggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgaca 27318561  T
Q  215 tcaaaagtttagt 227  Q
    |||||||||||||    
T  27318560 tcaaaagtttagt 27318548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 19119859 - 19119974
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| |||||  |||||||||||||| |||||||| |||    
T  19119859 ggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacagtga 19119958  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  19119959 catcaaaagttcagtc 19119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 30969459 - 30969384
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30969459 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatgacatcaaaagttcagtc 30969384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 15724486 - 15724596
Alignment:
Q  109 atatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 208  Q
    |||||||||||||||  | ||||| | || | ||||||||||| ||||||||||| ||||  || |||| | ||||||||||||||||||| ||| ||||    
T  15724486 atatggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttataca 15724585  T
Q  209 atgacatcaaa 219  Q
    |||||||||||    
T  15724586 atgacatcaaa 15724596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 9200263 - 9200348
Alignment:
Q  143 acttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||| || ||||||||||| ||||  || |||| ||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  9200263 acttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtgacatcaaaagtttagtc 9200348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 22255172 - 22255292
Alignment:
Q  104 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtat-aaaaaatgttgtgagtaacaccccactatt 202  Q
    |||||| | |||||| ||||| | |||||||  ||| | ||||||||| ||||||||||||||||  || |||||||||  |||||||||||||||  ||    
T  22255172 tttaaagaaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtt 22255271  T
Q  203 tgtacaatgacatcaaaagtt 223  Q
    ||||||||| |||||||||||    
T  22255272 tgtacaatggcatcaaaagtt 22255292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 5829896 - 5830016
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagt----ataaaaaatgttgtgagtaacaccccactatttgtac 207  Q
    ||||||||||||  | ||||||   ||| ||| ||||||| |||||||||||||||| |    |||||||||||  |||||||||||| ||  |||||||    
T  5829896 tggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtac 5829995  T
Q  208 aatgacatcaaaagtttagtc 228  Q
    |||||||||||||||||||||    
T  5829996 aatgacatcaaaagtttagtc 5830016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 7693229 - 7693340
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | |||||||  ||| |||||||| || ||||||||||| ||||  || |||| |||||||||||||| |||||| |||||||| ||    
T  7693229 tggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 7693328  T
Q  212 acatcaaaagtt 223  Q
     |||||||||||    
T  7693329 gcatcaaaagtt 7693340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 24886136 - 24886219
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||| | ||||  || ||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  24886136 ttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 24886219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 39572819 - 39572929
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||| |  | ||||||| | |||| |||||||||||||||||||||||| ||||| ||||| || |||    
T  39572819 ggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtga 39572918  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  39572919 catcaaaagtt 39572929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 22019660 - 22019757
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||||| || ||||||||| | ||||| || |||| ||||||||||||||||||| | |||||| | |||||||||||||| |||| || ||||||    
T  22019660 tgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtgacatcaaaagttaagtccccttagtat 22019757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 22980821 - 22980918
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||||| || ||||||||||| |||||||| ||||||   |||||||| |||||||| ||||  ||||||||||||||||| |||| || ||||||    
T  22980821 tgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgtttgagcaatgacatcaaaagttcagtccccatagtat 22980918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 23116399 - 23116287
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | || |||| |||| ||||||||||  ||||||||||||||||  || |||| ||| ||||||| ||||||||| |||||||| |    
T  23116399 atggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagt 23116300  T
Q  211 gacatcaaaagtt 223  Q
    |  ||||||||||    
T  23116299 ggaatcaaaagtt 23116287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 14919671 - 14919588
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||||||||  || ||||||||  ||||||||||| |||| ||| || |||||||||||||||| ||||    
T  14919671 ttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtc 14919588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 17158165 - 17158095
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| ||||  |||||||||||  |||||||||| ||||  |||||||||||||||||||||||    
T  17158165 tgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagtt 17158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 32563150 - 32563264
Alignment:
Q  114 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 213  Q
    ||||||||||  | |||||||  ||| ||| |||| || ||||||||||| ||||  || |||| ||||||||||||||| ||||| | |||||| ||||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  214 atcaaaagtttagtc 228  Q
    |||||||||| ||||    
T  32563250 atcaaaagttcagtc 32563264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 25501099 - 25500986
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| || | |||||||| || | ||||||||| ||||| || |||| |||||||| ||||||| |||| |||||||| || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  215 tcaaaagtttagtc 228  Q
    ||||||||| ||||    
T  25500999 tcaaaagttaagtc 25500986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 35511654 - 35511537
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    ||||||||| |||  | ||||||| |||| |||| ||| || ||||||||||||||||  || || | ||| ||||||||||| ||||| |||||| | |    
T  35511654 atggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagt 35511555  T
Q  211 gacatcaaaagtttagtc 228  Q
    ||||||||||||| ||||    
T  35511554 gacatcaaaagttcagtc 35511537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 13956529 - 13956425
Alignment:
Q  104 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 203  Q
    ||||| || |||||||||||| | ||||||| |||| |||||||| |  ||||||||||| ||||  || |||| ||| |||||||||||| |||| |||    
T  13956529 tttaattaaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgttt 13956430  T
Q  204 gtaca 208  Q
    |||||    
T  13956429 gtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 31705785 - 31705677
Alignment:
Q  114 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 213  Q
    ||||||||||  | |||||||  ||| ||| ||||||| ||||||||||| ||||  || ||||||||   ||||||||||| ||  |||||||||||||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaatgac 31705686  T
Q  214 atcaaaagt 222  Q
    |||||||||    
T  31705685 atcaaaagt 31705677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 12910350 - 12910445
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 208  Q
    |||||||||||  | ||||||| |||| ||||||||||| ||||||||| | ||||  || |||||| | ||| ||||||||||||| ||||||||    
T  12910350 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtaca 12910445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 7209037 - 7208923
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 213  Q
    |||||||||| | |||||||  ||| |||||||||| | ||||||||||||| ||  ||||||||||    ||||||||||| ||  |||||||| ||||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  214 atcaaaagtttagtc 228  Q
    |||||||||| ||||    
T  7208937 atcaaaagttcagtc 7208923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 22974257 - 22974147
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||| | || | ||| ||||||| ||||||||||| ||||  || ||||| ||  ||||||||| |||||| |||||||||| |    
T  22974257 ggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaataa 22974158  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  22974157 catcaaaagtt 22974147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 31786793 - 31786711
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| ||||||||||| ||||| || |||||||| ||||| |   ||||||| |||||||| || |||||||||||    
T  31786793 tgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtggcatcaaaagtt 31786711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 11898044 - 11898117
Alignment:
Q  155 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||| || |||| ||   |||||||||||| |||| ||||||| |||||||||||||||||||    
T  11898044 aagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgacatcaaaagtttagtc 11898117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 38528411 - 38528294
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| ||  |||| || ||||||||||| ||||  || |||| |||  |||||||||||||| | ||| |||| |||    
T  38528411 ggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagtga 38528312  T
Q  213 catcaaaagtttagtctc 230  Q
    ||||||||||| ||||||    
T  38528311 catcaaaagttcagtctc 38528294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 6824595 - 6824547
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagt 222  Q
    |||| ||||||||||||||| ||||| |||||||| |||||||||||||    
T  6824595 aaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagt 6824547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 25668710 - 25668774
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||| ||||||||||||||||||||| |||| ||| || ||||||||||| |||| || ||||||    
T  25668710 aaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcagtccccttagtat 25668774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 8436970 - 8437081
Alignment:
Q  117 aattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatc 216  Q
    ||||||| || ||||||| || | ||| ||||||| |||| |||||| |||||  |  ||| ||| |||||||||| |||| | |||||||| |||||||    
T  8436970 aattctaatgtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatc 8437069  T
Q  217 aaaagtttagtc 228  Q
    ||||||| ||||    
T  8437070 aaaagttcagtc 8437081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 35826658 - 35826543
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||||||||||  ||||||||| | ||||  || ||||||||  ||||||||||  || | |||||||| |||    
T  35826658 ggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagtga 35826559  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  35826558 catcaaaagttcagtc 35826543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 35933917 - 35933988
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccact 199  Q
    ||||||| || | ||| ||||||| ||||||||||| ||||| || |||| |||||||||||||||| ||||    
T  35933917 gaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacctcact 35933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 27330334 - 27330429
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||||| || ||||||||||| ||||  || |||| |||||  |||||||||  ||| ||||||||||| ||||||||||| ||||| | ||||||    
T  27330334 tgacttttctggtgaagttaacactataacatcaaaagtgttg--agtaacaccttactgtttgtacaatggcatcaaaagttcagtcttcatagtat 27330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 28416662 - 28416592
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| |||| ||| |||| | |||||||||||| |||||| |||||||| ||  ||||||||||    
T  28416662 tgaagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtggaatcaaaagtt 28416592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 42342794 - 42342840
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaa 220  Q
    ||||||||||||||||| |||||||| ||| |||| |||||||||||    
T  42342794 aaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaa 42342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 16004555 - 16004474
Alignment:
Q  110 tatggaaaattctactgggaagtcacga-aattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaa 190  Q
    ||||||||||||||  |  |||||| || ||||||||||| || ||||||||||| ||||  || |||||||||||||||||    
T  16004555 tatggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 21017294 - 21017171
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||| ||| | |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  21017294 aaaattatacggtgaagtcacgaaaatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtacaatggca 21017195  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| |||| || ||||||    
T  21017194 tcaaaagttcagtccccatagtat 21017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 3880123 - 3880013
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||||| | |||||||| || |||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  3880123 ggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatga 3880024  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  3880023 catcaaaagtt 3880013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 8513233 - 8513348
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| |||| ||| |||| ||||||||||||||||||||| |||||||| |||    
T  8513233 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtga 8513332  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  8513333 catcaaaagttcagtc 8513348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 4319007 - 4318897
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||||||||||| ||||||||||| ||||  || |||| |||| |||||||||||||||| |||||||| |||    
T  4319007 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacagtga 4318908  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  4318907 catcaaaagtt 4318897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 5627391 - 5627501
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||| ||||  ||||||||| |  ||||||||||||||||||||||| |||||    
T  5627391 ggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaatga 5627490  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  5627491 catcaaaagtt 5627501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 1945827 - 1945944
Alignment:
Q  107 aaatatggaaaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgt 205  Q
    ||||| |||||||||||| | |||||||  | | |||||||||| | ||||||||||| ||||  || ||||||||  |||||||||||||||| |||||    
T  1945827 aaataaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgt 1945926  T
Q  206 acaatgacatcaaaagtt 223  Q
    | ||||||||||||||||    
T  1945927 agaatgacatcaaaagtt 1945944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 6088910 - 6089033
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| || | ||| |||| || ||||||||||| |||||||| |||| ||||||||||||| ||||||| |||||| | || ||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| |||| || ||||||    
T  6089010 tcaaaagttcagtcaccatagtat 6089033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 33893146 - 33893071
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  33893146 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatgatattaaaagttcagtc 33893071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 15491655 - 15491725
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||||| ||  || |||| |||||||||||||||||||||||||||||| || |||||||||||    
T  15491655 tgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagtt 15491725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 29182178 - 29182281
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | ||| ||| ||| ||||||||||| ||||  || |||| ||||||||||||||||||||| ||| |||| || ||||||||||| |||    
T  29182178 gaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtgtcatcaaaagttcagt 29182277  T
Q  228 ctcc 231  Q
    ||||    
T  29182278 ctcc 29182281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 7055367 - 7055289
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||||| ||||  ||||||||| |  | ||||||||| ||||||||||| ||||||||||||||||    
T  7055367 ttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatgacatcaaaagtt 7055289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 6091368 - 6091257
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||| |||||||| || ||||||| |||| | | ||||||| | ||||||||||  ||  ||||||||||| ||||||||||| ||| | ||||||||||    
T  6091368 atgggaaattctattgtgaagtcatgaaaataatttttttggtaaagttaacatg-taacataaaaaatgtagtgagtaacacaccattgtttgtacaat 6091270  T
Q  211 gacatcaaaagtt 223  Q
    | |||||||||||    
T  6091269 gccatcaaaagtt 6091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 30353540 - 30353417
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| || | |||||||| || ||||||||||||||||  || |||| ||||| |||||| | | |||| |||||||| || ||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    || | |||| ||||||| ||||||    
T  30353440 tcgatagttcagtctccatagtat 30353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 7235227 - 7235101
Alignment:
Q  104 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 203  Q
    ||||| ||||||||||||||  | ||||| | || | ||||||||  | |||||| |||| ||||  || |||| ||| ||||||| ||||||||| |||    
T  7235227 tttaattatggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgttt 7235128  T
Q  204 gtacaatgacatcaaaagtttagtctc 230  Q
    ||||  || ||||||||||| ||||||    
T  7235127 gtacggtgccatcaaaagttcagtctc 7235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 18498448 - 18498549
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatgacatcaaaagtttag 226  Q
    ||||||| || | |||||||  || ||||||||||||||||| || |||| ||| ||||| |||| ||||||  |||||||| || ||||||||||| ||    
T  18498448 gaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtacagtggcatcaaaagttcag 18498547  T
Q  227 tc 228  Q
    ||    
T  18498548 tc 18498549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 4582893 - 4583019
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | |||||||||||| |||||||| || ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4582893 tggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatg 4582992  T
Q  212 acatcaaaagtttagtctccgtagtat 238  Q
    |||||||||||| |||| || ||||||    
T  4582993 acatcaaaagttcagtccccatagtat 4583019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 43686016 - 43686130
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||||||| ||||||||| | ||||||||||| |||| ||| ||||||||||||||||||| |||||| |||||||||||     
T  43686016 ggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaaca-cccactgtttgtacaatgg 43686114  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  43686115 catcaaaagttcagtc 43686130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 37109846 - 37109962
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | |||||||  ||| ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||  |||||||||||    
T  37109846 tggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 37109945  T
Q  212 acatcaaaagtttagtc 228  Q
    |||||||||||| ||||    
T  37109946 acatcaaaagttcagtc 37109962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 7334769 - 7334879
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||| | ||||||  || | ||||||||||| ||||||||||| ||||  |||||| ||||  |||||||||||||||| ||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  7334869 catcaaaagtt 7334879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 32432432 - 32432552
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||||||| ||| |||| || ||||||||||| |||      |||||||||||||||||||||||| | ||||||||||||    
T  32432432 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatc-----aaaaatgttgtgagtaacaccccattgtttgtacaatga 32432526  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||||| ||||||    
T  32432527 catcaaaagttcagtctccatagtat 32432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 32821239 - 32821114
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| ||| ||||||| ||||||||||| ||||  || |||||||| ||||||||||| ||||| |||||||||||     
T  32821239 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatgg 32821140  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||  ||||||||    
T  32821139 catcaaaagttcagtcctcgtagtat 32821114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 17842772 - 17842664
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  ||| ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||  ||||||||||||    
T  17842772 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 17842673  T
Q  213 catcaaaag 221  Q
    |||||||||    
T  17842672 catcaaaag 17842664  T

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Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 43925081 - 43925202
Alignment:
Q  114 gaaaattctactgggaagtcacgaaattgacttttttgt-tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    ||||||||||| |  ||||||||||| ||| ||||||   ||||||||||||| |||||||||||||||||||||||||||| |||    ||||||||||    
T  43925081 gaaaattctacggtaaagtcacgaaaatgattttttttagtgaagttaacattgtagtataaaaaatgttgtgagtaacacctcac----tgtacaatga 43925176  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||| | ||||||    
T  43925177 catcaaaagttcagtctacatagtat 43925202  T

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Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 29173543 - 29173630
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||| || ||||||||||| | |||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  29173543 tgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtc 29173630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 38258521 - 38258630
Alignment:
Q  114 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 213  Q
    ||||||||||| | |||||||  ||| ||| ||||||| ||||||||||| ||||  |||||||||||  ||||||||||| |||  |||||||||||||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaatgac 38258620  T
Q  214 atcaaaagtt 223  Q
    ||||||||||    
T  38258621 atcaaaagtt 38258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 12165726 - 12165842
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||| | ||||||   ||| |||||||| || ||||||||||| ||||| ||  ||| ||||||||||||||||||||| |||||||| ||    
T  12165726 tggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtg 12165825  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  12165826 gcatcaaaagttaagtc 12165842  T

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Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 5657669 - 5657542
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | ||||||| || | |||||||| |  ||||||||||| ||||  || |||| ||||||||||||||||||||| |||||||| |    
T  5657669 atggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 5657570  T
Q  211 gacatcaaaagtttagtctccgtagtat 238  Q
    | ||||||||||| ||||| | ||||||    
T  5657569 ggcatcaaaagttcagtcttcatagtat 5657542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 18797304 - 18797412
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||||||||||| ||||||||||| ||    |||||||||||  |||||||||||||||| ||||||||||||    
T  18797304 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactaac--ataaaaaatgtaatgagtaacaccccactgtttgtacaatga 18797401  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  18797402 catcaaaagtt 18797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 23111180 - 23111275
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| |||| ||| |||| || ||||||||||| ||||  || |||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  23111180 gaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggcatcaaaagtt 23111275  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 26980326 - 26980413
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||| || ||||||||||||||||| || |||| ||||||||||||||||||||  |||||||| || ||||||||||| ||||    
T  26980326 tgacttttatggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtc 26980413  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 27421533 - 27421450
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| ||||  || |||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  27421533 ttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtc 27421450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 30055534 - 30055617
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| |||| ||| |||| |||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  30055534 ttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 30055617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 6546534 - 6546619
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||| || |||| ||||| |||||||||||||||||||||||| | |||||||||||||| | ||| ||||||    
T  6546534 tgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaacatcaaaagtttactatccatagtat 6546619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 21991611 - 21991736
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||| |||| || ||||||||||| ||||| || |||| ||||| ||||||||||||||| |||||||| ||     
T  21991611 ggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgtacagtgt 21991710  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| |||| || ||||||    
T  21991711 catcaaaagttcagtccccatagtat 21991736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 9355978 - 9355898
Alignment:
Q  147 ttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||| |||| |||||| ||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||||||||||    
T  9355978 ttttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagtgacatcaaaagtttagt 9355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 27283718 - 27283848
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | ||||| |  ||| ||| ||||||| ||||||||||| ||||  || ||||||||  |||||||||||||||  |||||||||||    
T  27283718 tggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatg 27283817  T
Q  212 acatcaaaagtttagtctccgtagtattatc 242  Q
    | |||||||||| ||||  | ||||||||||    
T  27283818 aaatcaaaagttcagtcctcatagtattatc 27283848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 31520894 - 31520794
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| |||| ||||||||||| ||||||||| | ||||  || |||||| | ||||||||||| ||| | |||||||| |||||||||||||| |||    
T  31520894 gaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgtacagtgacatcaaaagttcagt 31520795  T
Q  228 c 228  Q
    |    
T  31520794 c 31520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 8861258 - 8861385
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | ||||||| || | |||||||| |   |||||||||| ||||| || |||| |||| ||| |||||||||||| |||||||| |    
T  8861258 atggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtacagt 8861357  T
Q  211 gacatcaaaagtttagtctccgtagtat 238  Q
    | ||||||||||| |||| || ||||||    
T  8861358 ggcatcaaaagttaagtccccatagtat 8861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 12390825 - 12390687
Alignment:
Q  104 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 203  Q
    |||||| | |||||||||||  | |||||||  | || |||||||||| ||||||||||| ||||  || |||| |||  ||||||||| |||||| |||    
T  12390825 tttaaaaaaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgttt 12390726  T
Q  204 gtacaatgacatcaaaagtttagtctccgtagtattatc 242  Q
    || || ||||||||||||||  ||| || ||||||||||    
T  12390725 gtgcagtgacatcaaaagttatgtccccatagtattatc 12390687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 22687229 - 22687339
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | |||||||| || ||||||||||| ||||  || |||||||||||||||||||| ||||| ||||| || ||  |||||||||| |||    
T  22687229 gaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcagt 22687328  T
Q  228 ctccgtagtat 238  Q
    | || ||||||    
T  22687329 ccccatagtat 22687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 38053493 - 38053571
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||| | ||||  |||||||||||  ||||||| |||| ||| |||||||||||||||||||||||    
T  38053493 ttttttggtgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagtt 38053571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 34362292 - 34362228
Alignment:
Q  155 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaa 219  Q
    ||||||||| ||||| || |||| ||||||||||||||||||||| |||||||| || |||||||    
T  34362292 aagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaa 34362228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 37347012 - 37347112
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| |||| ||| ||||||| ||||||||| | ||||  || |||||| |  |||||||||||||| | |||||||| |||||||||||||| |||    
T  37347012 gaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtgacatcaaaagttcagt 37347111  T
Q  228 c 228  Q
    |    
T  37347112 c 37347112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 10359402 - 10359284
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | ||||||| || | |||||||| || | || ||||  |||||| || |||| ||| |||||||||| || ||||||| |||| |    
T  10359402 atggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagt 10359303  T
Q  211 gacatcaaaagtttagtct 229  Q
    ||||||||||||| |||||    
T  10359302 gacatcaaaagttcagtct 10359284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 24211744 - 24211826
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||||| ||| ||| || |||| |||||||||||    
T  24211744 tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggcatcaaaagtt 24211826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 31579223 - 31579125
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccact-----atttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||| ||||||||||| ||||  || ||||||||  ||||||||||||||||     |||| ||||||||||||||||||| ||||| | ||||||    
T  31579223 ttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttatacaatgacatcaaaagttcagtcttcatagtat 31579125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 44413550 - 44413440
Alignment:
Q  129 aagtcacgaaattgacttttttgt-tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||| |||| ||||||||||   ||||||||||| ||||  || |||||| | ||||||||||||||| | |||||||| ||| ||||||||||  ||    
T  44413550 aagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaaatcaaaagttcggt 44413451  T
Q  228 ctccgtagtat 238  Q
    |||| ||||||    
T  44413450 ctccatagtat 44413440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 48928734 - 48928621
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | |||||||| || |||||| |||| ||||  || |||| ||| ||||||| |||||||||||||||||  || ||||||||||| |||    
T  48928734 gaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagt 48928635  T
Q  228 ctccgtagtattatc 242  Q
    | || ||||||||||    
T  48928634 c-ccatagtattatc 48928621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 10481619 - 10481696
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacacccc-actatttgtacaatgacatcaaaagtttagtct 229  Q
    ||||||||||| ||||  ||||||||| |  ||||||||||||| ||| |||||||||||||||||||| || |||||    
T  10481619 tgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtacaatgacatcaaaaattcagtct 10481696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 48928454 - 48928354
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtatta 240  Q
    |||||||| || |||||| |||| ||||  || |||| ||| ||||||| |||||||||||||||||  || ||||||||||| |||| || ||||||||    
T  48928454 tgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtc-ccatagtatta 48928356  T
Q  241 tc 242  Q
    ||    
T  48928355 tc 48928354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 8299192 - 8299256
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaat 179  Q
    |||||||||  | |||||||||||| |||||||| || ||||||||||| |||||||| ||||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactatagtatcaaaaat 8299256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 26524513 - 26524404
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||| || ||| ||||||| ||||  || ||||||||||||| |||||| ||| | ||||| || ||     
T  26524513 ggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagtgg 26524414  T
Q  213 catcaaaagt 222  Q
    ||||||||||    
T  26524413 catcaaaagt 26524404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 37704182 - 37704238
Alignment:
Q  153 tgaagttaacattatagtataaaaaa-tgttgtgagtaacaccccactatttgtaca 208  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| | ||||||||    
T  37704182 tgaagttaacactatagcataaaaaaatgtagtgagtaacaccccattgtttgtaca 37704238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 4166916 - 4167047
Alignment:
Q  107 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 206  Q
    ||||| |||||||||||  | |||||||||||| |||||||| || |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  4166916 aaataaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgta 4167015  T
Q  207 caatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||| ||||||||||| |||| || ||||||    
T  4167016 caatggcatcaaaagttcagtccccatagtat 4167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 33551192 - 33551079
Alignment:
Q  110 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 209  Q
    ||||||||||||||| | ||||||| || | ||||||||||  ||||||||||| ||||  || |||||||| ||||||||||||||||| |||||||||    
T  33551192 tatggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaa 33551093  T
Q  210 tgacatcaaaagtt 223  Q
    ||||||||||||||    
T  33551092 tgacatcaaaagtt 33551079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 13711492 - 13711579
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||| || ||||||||||||||||| || |||| ||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  13711492 tgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgacatcaaaagtttagtc 13711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 4264280 - 4264151
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | |||||||| || | ||||||||| ||||| || |||| |||||||||||||| |||||| |||||||| |||    
T  4264280 ggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtga 4264181  T
Q  213 catcaaaagtttagtctccgtagtattatc 242  Q
    ||||||||||| ||||||| ||||||||||    
T  4264180 catcaaaagttcagtctccatagtattatc 4264151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 39167551 - 39167451
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||||| | ||| ||||||| |||||||||||  ||||||| |||| | |||||||||||||| |||| ||||||||||||||||||||||| |||    
T  39167551 gaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaatgacatcaaaagttcagt 39167452  T
Q  228 c 228  Q
    |    
T  39167451 c 39167451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 27350109 - 27350026
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| ||||| || ||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||    
T  27350109 ttttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagtgacatcaaaagttcagtc 27350026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 3176941 - 3177054
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||| |||||| |||||||| || ||||||||| | |||| ||| ||||||||| |||||||||| | ||| ||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  215 tcaaaagtttagtc 228  Q
    ||||||||| ||||    
T  3177041 tcaaaagttcagtc 3177054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 19313850 - 19313967
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | |||||||  | | |||||||| || ||||||||||||||||| || |||| ||||||||||||||||  ||||||| |||| |    
T  19313850 atggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagt 19313949  T
Q  211 gacatcaaaagtttagtc 228  Q
    ||||||||||||| ||||    
T  19313950 gacatcaaaagttcagtc 19313967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 44913661 - 44913772
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac-tatttgtacaat 210  Q
    ||||||||||||  | |||||||||||| |||||||| ||| |||||||||| | |||||| ||||||||||||||||||||| ||| | |||||| |||    
T  44913661 tggaaaattctatggtgaagtcacgaaaatgacttttatgt-gaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaat 44913759  T
Q  211 gacatcaaaagtt 223  Q
    ||||| |||||||    
T  44913760 gacataaaaagtt 44913772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 26357592 - 26357687
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| |||| |||||||| || ||||||||||| ||||  || |||| ||| |||||||||| |||||| |||||||| ||||||||||||||    
T  26357592 gaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtgacatcaaaagtt 26357687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 37905740 - 37905823
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| ||||  |||||||||||   ||||||||||||||  ||||||||||||||||||||||| ||||    
T  37905740 ttttttggtgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatgacatcaaaagttcagtc 37905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 19289498 - 19289416
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| ||||||||||| ||||  || |||||| |  |||||||||||||| | |||||||||||||||||||||||    
T  19289498 tgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaatgacatcaaaagtt 19289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 35958905 - 35959019
Alignment:
Q  109 atatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 208  Q
    |||||||||||||||    |||||||  ||| ||||||||||| |||||||  || ||||  |||||||||||  |||| ||||||||||| ||||||||    
T  35958905 atatggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtaca 35959004  T
Q  209 atgacatcaaaagtt 223  Q
    ||||||| |||||||    
T  35959005 atgacattaaaagtt 35959019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 5881600 - 5881664
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||| |||| || ||||||    
T  5881600 aaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttgagtccccttagtat 5881664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 43771010 - 43770927
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| ||||  || |||| ||||||||||||||||||||| ||| |||| || ||||||||||| ||||    
T  43771010 ttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggcatcaaaagttcagtc 43770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 4478402 - 4478484
Alignment:
Q  146 tttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||| ||||||||||| ||||  || |||| ||||||||||||||| ||| | |||||||| || ||||||||||||||||    
T  4478402 tttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtggcatcaaaagtttagtc 4478484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 11366556 - 11366474
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| |||| |||||| ||||  || ||||||||  ||||||||| | ||||||||||| ||||||||||||||||    
T  11366556 tgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatgacatcaaaagtt 11366474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 17071940 - 17071830
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |  | ||||||||||| ||||||||||| ||||  |  |||||||| || ||||||| | || ||||||||||||||    
T  17071940 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatga 17071841  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  17071840 catcaaaagtt 17071830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 18494456 - 18494386
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac 198  Q
    ||||||| |||| |||||||| || ||||||||||| ||||| || |||| ||||||||||||||||||||    
T  18494456 gaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 43648415 - 43648333
Alignment:
Q  146 tttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||| ||||||||||| ||||  || ||||||||  ||||||||||| |||| |||||| |||||||||||||||| ||||    
T  43648415 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtc 43648333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 29242341 - 29242216
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| ||  ||||||| ||||||||| | ||||  ||||||||| | ||| ||||||||||||| |||||||| ||     
T  29242341 ggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagtgg 29242242  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
     |||||||||| ||||| | ||||||    
T  29242241 tatcaaaagttcagtcttcatagtat 29242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 33902124 - 33902181
Alignment:
Q  171 ataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||||| |||||||| |||||||| |||||| |||||||||||||||| ||||    
T  33902124 ataaaaaatgtagtgagtaataccccactgtttgtaaaatgacatcaaaagttcagtc 33902181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 36641988 - 36642101
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| || | |||||||| || |||| |||| | ||||| || |||| ||||| |||||||||| |||| |||||||| |||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  215 tcaaaagtttagtc 228  Q
    ||||||||| ||||    
T  36642088 tcaaaagttcagtc 36642101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 41464025 - 41463943
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    |||| |||||| ||||||||| | ||||  || |||| |||||||||||||||| |||| |||||||| || |||||||||||    
T  41464025 tgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggcatcaaaagtt 41463943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 4763692 - 4763741
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    |||| ||| ||||||||||||||||| |||||||| ||||||||||||||    
T  4763692 aaaactgtagtgagtaacaccccactgtttgtacagtgacatcaaaagtt 4763741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 17054299 - 17054190
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |  | ||||||||||| ||||||||| | ||||  || |||||||| || ||||||| | || | ||||||||||||    
T  17054299 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatga 17054200  T
Q  213 catcaaaagt 222  Q
    ||||||||||    
T  17054199 catcaaaagt 17054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 31570907 - 31570822
Alignment:
Q  143 acttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||| || |||| |||||| ||||  || |||| |||||| |||||||||||||||||| || | |||||||||||||| ||||    
T  31570907 acttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagtgacatcaaaagttcagtc 31570822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 33660529 - 33660456
Alignment:
Q  155 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||| ||||  || |||| ||||||||||||||||| ||| |||||||| || ||||||||||| ||||    
T  33660529 aagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggcatcaaaagttcagtc 33660456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 33709395 - 33709310
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||  || |||| ||||| ||||||||| ||||| || ||||| |||||||||||||| |||| || ||||||    
T  33709395 tgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtat 33709310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 19424800 - 19424716
Alignment:
Q  144 cttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||| || ||||||||||| ||||  || |||| ||||||||||||||||||| | ||| || | || ||||||||||||||||    
T  19424800 cttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtggcatcaaaagtttagtc 19424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 9864162 - 9864262
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||||||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  9864162 gaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatgacatcaaaagttcagt 9864261  T
Q  228 c 228  Q
    |    
T  9864262 c 9864262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 12876102 - 12876223
Alignment:
Q  107 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 206  Q
    |||| ||||||||||||  |  ||||||||||| |||||||| || ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||    
T  12876102 aaatttggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgta 12876201  T
Q  207 caatgacatcaaaagtttagtc 228  Q
    ||||||||||||||||| ||||    
T  12876202 caatgacatcaaaagttcagtc 12876223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 36695157 - 36695032
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| |||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  36695157 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 36695058  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| |||| || ||||||    
T  36695057 catcaaaagttcagtccccatagtat 36695032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 40862418 - 40862536
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtat-aaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    |||||||||||  | |||||||||||| | |||||| || ||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  40862418 ggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaatg 40862517  T
Q  212 acatcaaaagtttagtctc 230  Q
     ||||||||||| ||||||    
T  40862518 gcatcaaaagttcagtctc 40862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 10555394 - 10555283
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||| | ||||||| || | ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||| ||||| |||||||||||    
T  10555394 tggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatg 10555295  T
Q  212 acatcaaaagtt 223  Q
    ||||||||||||    
T  10555294 acatcaaaagtt 10555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 6098711 - 6098584
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | ||||||| |||| | ||||||||| ||||||||| | ||||| || |||||| | ||||||||||||||||| |||||||| |    
T  6098711 atggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgtacagt 6098612  T
Q  211 gacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||||| |||| || ||||||    
T  6098611 gacatcaaaagttcagtccccatagtat 6098584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 13307621 - 13307751
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | ||||||| || | ||| |||| || ||||||||||| ||||  || |||| |||||||||||||||| ||||||||||||| ||    
T  13307621 tggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtg 13307720  T
Q  212 acatcaaaagtttagtctccgtagtattatc 242  Q
    |||||||||||| |||| || ||||||||||    
T  13307721 acatcaaaagttcagtccccatagtattatc 13307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 23854625 - 23854507
Alignment:
Q  110 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 209  Q
    ||||||||| ||||| | ||||||| || | ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||| ||| ||||| |||    
T  23854625 tatggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaa 23854526  T
Q  210 tgacatcaaaagtttagtc 228  Q
    |||||||||||||| ||||    
T  23854525 tgacatcaaaagttcagtc 23854507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 1204926 - 1205041
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||| ||| | ||||||| || | |||||||| || ||||||||||| ||||  ||||||||||| |||||||||||  |||| ||||||||||||    
T  1204926 ggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaatga 1205025  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  1205026 catcaaaagttcagtc 1205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 16447066 - 16446951
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||||||| || | ||||||||| ||||  || |||| ||| ||||||||||||||||| |||||| ||||     
T  16447066 ggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatgg 16446967  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||||||||    
T  16446966 catcaaaagtttagtc 16446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 37970695 - 37970600
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| || | ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||||||||| ||||||||||| |||||||||||    
T  37970695 gaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaaaagtt 37970600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 8803973 - 8803891
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||| |||||||||||| ||||||||||||||||    
T  8803973 tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatgacatcaaaagtt 8803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 41362517 - 41362624
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||| | |||| ||||||||||| |||||||||||   ||| || |||||||| |||||||||||||||||||||||| | |||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaaca--ctagcat-aaaaatgtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  41362614 catcaaaagtt 41362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 30654742 - 30654664
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||| |||||  ||||||||||||||||    
T  30654742 ttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatgacatcaaaagtt 30654664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 38643977 - 38644102
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||| ||| || | ||||||||||| | ||||||||| ||||  || |||| ||||||||||||||||||||| |||||  | ||     
T  38643977 ggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 38644076  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||||| ||||||    
T  38644077 catcaaaagttcagtctccatagtat 38644102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 1150296 - 1150181
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||  ||||  || ||||||||  ||||||||| |||||| ||||||||| ||    
T  1150296 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacga 1150197  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  1150196 catcaaaagttcagtc 1150181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 11727055 - 11727138
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| ||||  || |||| |||||| ||||||||||||||||||||| | || ||||||||||| ||||    
T  11727055 ttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcagtc 11727138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 31934045 - 31933962
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||||| |||  ||| |||||| |  |||||||||||||||| ||| ||||||||||||||||||| ||||    
T  31934045 ttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgacatcaaaagttcagtc 31933962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 34952222 - 34952107
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  |  ||||||  ||| |||||||| || | ||||||||| ||||  || |||| |||||||||||||| |||||| |||||||| |||    
T  34952222 ggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtga 34952123  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  34952122 catcaaaagttcagtc 34952107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 465856 - 465966
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||  ||| |||||||| || |||||||||||  |||  || |||| ||||||||||||||||||||| |||||||| || |||||||| || |||    
T  465856 gaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaaattcagt 465955  T
Q  228 ctccgtagtat 238  Q
    | || ||||||    
T  465956 ccccttagtat 465966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 43643786 - 43643676
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||||| ||||| ||||||||||| ||||  || ||||||||  |||||||||| | ||| ||||||||||||    
T  43643786 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 43643687  T
Q  213 catcaaaagtt 223  Q
    |||| ||||||    
T  43643686 catccaaagtt 43643676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 5300138 - 5300022
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | ||||||| || | ||||||||||  ||||||||||| ||||| || |||| |||||| |||| ||| | ||| |||||||| ||    
T  5300138 tggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtg 5300039  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  5300038 gcatcaaaagttcagtc 5300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 16222862 - 16222977
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||| | ||| ||| || | |||||||| || |||| |||||| ||||  ||||||||| | |||||||   ||||||  ||||||||||||    
T  16222862 ggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaatga 16222961  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  16222962 catcaaaagttcagtc 16222977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 27083029 - 27082914
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | |||||||| || ||||||||||| ||||| || |||| ||| ||||||||||||||||| ||||| || ||     
T  27083029 ggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtgg 27082930  T
Q  213 catcaaaagtttagtc 228  Q
    ||| ||||||| ||||    
T  27082929 cattaaaagttcagtc 27082914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 34894966 - 34895081
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| ||||  || || | ||| ||||||||||| ||||| |||||| | ||     
T  34894966 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34895065  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  34895066 catcaaaagttcagtc 34895081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 1149762 - 1149713
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||  ||||||||| |||||| |||||||||||||||||||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagtt 1149713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 43025741 - 43025799
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||  |||||||| |||| |||||||| ||| |||||||| |||||||||||    
T  43025741 tgaagttaacgatatagtatcaaaagtgttgtgattaataccccactctttgtacaatg 43025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 34132941 - 34133041
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||||||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  34132941 gaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatgacatcaaaagttcagt 34133040  T
Q  228 c 228  Q
    |    
T  34133041 c 34133041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 4015445 - 4015566
Alignment:
Q  107 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 206  Q
    |||||||||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| ||||||||||||||||| ||| ||||||    
T  4015445 aaatatggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgta 4015544  T
Q  207 caatgacatcaaaagtttagtc 228  Q
     | |||||||||||||| ||||    
T  4015545 gagtgacatcaaaagttcagtc 4015566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 35844317 - 35844442
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||  |  ||||||||||||||||||||| |||| |||||||| |||    
T  35844317 ggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgtacagtga 35844416  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    |||||||||||||||| || ||||||    
T  35844417 catcaaaagtttagtccccatagtat 35844442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 24489132 - 24489032
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||||||| ||| ||||||  ||||||||| | |||||||| |||||||||||||||||||  ||||| |||| |||||||||||||||||| |||    
T  24489132 gaagtcacgaaaatgattttttttgtgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagt 24489033  T
Q  228 c 228  Q
    |    
T  24489032 c 24489032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 29099374 - 29099471
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||||| || ||||||||||| ||||  ||||||||||| ||||||||||||||||| |||||||| ||||||| |||||| |||| || ||||||    
T  29099374 tgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagttcagtccccttagtat 29099471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 3655372 - 3655272
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||  ||| ||||||||||| | ||||||||| ||||  |||||||||||  |||||||||||||||  ||||||||||||||||||||||| |||    
T  3655372 gaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatgacatcaaaagttcagt 3655273  T
Q  228 c 228  Q
    |    
T  3655272 c 3655272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 51213167 - 51213051
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | ||||||| || | ||||||||||| ||||||||||| | ||  |||||||||||  |||| ||||||||||| |||||||||||    
T  51213167 tggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatg 51213068  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  51213067 gcatcaaaagttgagtc 51213051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 46297945 - 46297822
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| |||| |||||||| || ||||||||||| ||||  || |||||| | ||||||||||| ||||| ||||||||||| |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| |||| |||||||||    
T  46297845 tcaaaagttcagtccccgtagtat 46297822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 44186654 - 44186561
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||||||||| || ||| |||| |||||||||||||| |||| || ||||||    
T  44186654 ttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtgacatcaaaagttcagtccccatagtat 44186561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 22446247 - 22446140
Alignment:
Q  116 aaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    ||||||||| | ||||||| |||| |||||||||| | ||||||||||||||||  || |||||| | ||||||||||||||||| |||||||| || ||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggca 22446149  T
Q  215 tcaaaagtt 223  Q
    |||||||||    
T  22446148 tcaaaagtt 22446140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 37203057 - 37203173
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | |||||||  ||| ||| ||||||| ||||||||||| ||||  || |||| ||| ||||||||||||||||| |||||||| ||    
T  37203057 tggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtg 37203156  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  37203157 gcatcaaaagttcagtc 37203173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 47481546 - 47481626
Alignment:
Q  146 tttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttag 226  Q
    |||||| ||||||||||| ||||  || ||||||||  |||||||||||||||| |||||| |||||||||||||||||||    
T  47481546 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatgacatcaaaagtttag 47481626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 40552444 - 40552329
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||||||  |||||||||| ||||  || ||||||||  |||||||||| ||||  ||||||||||||    
T  40552444 ggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatga 40552345  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  40552344 catcaaaagttcagtc 40552329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 54505827 - 54505906
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaa 220  Q
    ||||||||||||||||||||||| ||||  || ||||||||  |||||||||||||| ||||| || |||||||||||||    
T  54505827 tgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatgacatcaaaa 54505906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 2007956 - 2008034
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    |||||| |||||||||||| |||||  | |||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  2007956 tttttttttgaagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagtt 2008034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 48354932 - 48355042
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||| |||| || ||||||||||| |||| ||| ||||||||  |||||||||||||| | |||||||||||     
T  48354932 ggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaatgg 48355031  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  48355032 catcaaaagtt 48355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 21193591 - 21193712
Alignment:
Q  107 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 206  Q
    ||||| |||||||||||  |  |||||| || | |||||||| || ||||||||||| | | | || |||| ||||||||||||||||||||| ||||||    
T  21193591 aaataaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgta 21193690  T
Q  207 caatgacatcaaaagtttagtc 228  Q
     | |||||||||||||| ||||    
T  21193691 gagtgacatcaaaagttcagtc 21193712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 37157698 - 37157813
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | ||||||| |||| || |||||||| ||||||||||| ||||  || |||| ||| |||||||||||||||||  ||||||| ||    
T  37157698 tggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccact-gttgtacagtg 37157796  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  37157797 gcatcaaaagttcagtc 37157813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 4761802 - 4761719
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| ||||||||| | |||| ||| ||||||||  ||||||||||  |||| ||||||||||||||||||||||| ||||    
T  4761802 ttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtacaatgacatcaaaagttcagtc 4761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 11466881 - 11466940
Alignment:
Q  179 tgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||| || ||||||    
T  11466881 tgttgtgagtaacaccccactgtttgtacagtggcatcaaaagtttagtccccatagtat 11466940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 3362276 - 3362354
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||||| ||||| || | |||| | |||||||||| ||||||||||||||| || |||||||||||    
T  3362276 ttttttggtgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagtt 3362354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 7327640 - 7327542
Alignment:
Q  141 tgacttttttgttgaagttaa-cattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||  ||||||||| || ||||  || |||| ||||||||||||||| ||| |||||||||| |||||||||||||| |||| || ||||||    
T  7327640 tgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagtgacatcaaaagttcagtccccatagtat 7327542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 20373449 - 20373371
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||| | ||||  || ||||||||   ||||||||||||||| |||||||||||||||||||||||    
T  20373449 ttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatgacatcaaaagtt 20373371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 21009926 - 21009877
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  21009926 aaaaatgtaatgagtaacaccccactatttgtagaatgacatcaaaagtt 21009877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 33378930 - 33378841
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtattatc 242  Q
    |||||| |||| |||||||| |||| ||| |||||||  |||||| |||||||||  |||||||||||||| |||| || ||||||||||    
T  33378930 tgaagtcaacactatagtatcaaaagtgtagtgagtagtaccccaatatttgtacggtgacatcaaaagttcagtccccatagtattatc 33378841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 43976034 - 43975961
Alignment:
Q  152 ttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagttta 225  Q
    ||||||| |||| ||||| || |||| ||| ||||||| ||| ||||||||||||| |||||||||||||||||    
T  43976034 ttgaagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacgatgacatcaaaagttta 43975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 2613896 - 2613971
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 203  Q
    |||||||  ||| ||||||||||||||||||||||| ||||  |  |||| |||||||||||||||| ||||||||    
T  2613896 gaagtcattaaaatgacttttttgttgaagttaacactataacaccaaaagtgttgtgagtaacaccacactattt 2613971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 26941445 - 26941330
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | ||| ||||||| ||||||||||| ||||  || |||| | |  |||||||||||||||| |||||| |||||    
T  26941445 ggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatga 26941346  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  26941345 catcaaaagttcagtc 26941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 44891495 - 44891583
Alignment:
Q  110 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccact 199  Q
    ||||||||||| ||| | ||||||| |||| ||||||||| || |||||||||| ||||  || |||| |||||||||||||| ||||||    
T  44891495 tatggaaaattatacggtgaagtcatgaaaatgactttttggt-gaagttaacactataacatcaaaagtgttgtgagtaacatcccact 44891583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 14586794 - 14586730
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||| |||||||||||||||| |||||||| |||| ||| ||||||||||| ||| || ||||||    
T  14586794 aaaagtgttgtgagtaacacctcactatttatacagtgatatcaaaagttttgtccccttagtat 14586730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 40935997 - 40936097
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | ||| |||| || ||||||||||| ||||| || |||| ||||| |||||||||| || | ||| |||| |||||||||||||| |||    
T  40935997 gaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttcagt 40936096  T
Q  228 c 228  Q
    |    
T  40936097 c 40936097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 42506189 - 42506145
Alignment:
Q  184 tgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  42506189 tgagtaataccccactgtttgtacaatgacatcaaaagttcagtc 42506145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 55343469 - 55343403
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaat 179  Q
    |||||||||||  | |||||||||||| |||||||| || ||||||||||| |||| ||| ||||||    
T  55343469 ggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaat 55343403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 11357535 - 11357434
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatgacatcaaaagtttag 226  Q
    ||||||| || | |||||||| || ||||||||||| ||||| || |||| | | |||||||||| ||||||| |||||||| |  ||||||||||| ||    
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcag 11357436  T
Q  227 tc 228  Q
    ||    
T  11357435 tc 11357434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 33698219 - 33698263
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacacccca 197  Q
    ||||||||||| ||||  || ||||||||||||||||||||||||    
T  33698219 tgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 17167715 - 17167838
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||| |||||| |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| | ||||| ||||||    
T  17167815 tcaaaagttcattctccatagtat 17167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 17173292 - 17173415
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||| |||||| |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| | ||||| ||||||    
T  17173392 tcaaaagttcaatctccatagtat 17173415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 4205116 - 4205221
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| |||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  4205116 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaatga 4205215  T
Q  213 catcaa 218  Q
    ||||||    
T  4205216 catcaa 4205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 27396618 - 27396727
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| || | |||||||| || ||||||||||||||||| || |||| |||| |||||||||||| ||| ||||||||||||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  215 tcaaaagttt 224  Q
    ||||||||||    
T  27396718 tcaaaagttt 27396727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 37775670 - 37775779
Alignment:
Q  114 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 213  Q
    ||||||||||| | |||||||  ||| ||| ||||||| |||||||| || |||| ||| |||||||||||||||||||||||||| |||||||| || |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  214 atcaaaagtt 223  Q
    ||||||||||    
T  37775770 atcaaaagtt 37775779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 49375964 - 49376092
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttt-tgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 209  Q
    |||||||||||||| | ||||||| || | ||||||||| || ||||||||||||||||| || |||| ||| |||||||||||||||||  |||||||     
T  49375964 atggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacag 49376063  T
Q  210 tgacatcaaaagtttagtctccgtagtat 238  Q
    || ||||||||||| ||||| | ||||||    
T  49376064 tggcatcaaaagttcagtcttcatagtat 49376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 9139247 - 9139355
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||||||||||||||| |||||||||| |||||| ||||||||  | ||||||||||||||||  |||||||| |||    
T  9139247 ggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaa--tagtgagtaacaccccaccgtttgtacagtga 9139344  T
Q  213 catcaaaagtt 223  Q
    ||| |||||||    
T  9139345 cataaaaagtt 9139355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 35021246 - 35021121
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||||||||  || |||||||| ||||||||||| ||||| |||||||| ||     
T  35021246 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacattgg 35021147  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    | |||||||||| |||  ||||||||    
T  35021146 cgtcaaaagtttcgtcctcgtagtat 35021121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 34361702 - 34361592
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||| |||||| |||||    
T  34361702 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaatga 34361603  T
Q  213 catcaaaagtt 223  Q
    ||| |||||||    
T  34361602 cattaaaagtt 34361592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 39397916 - 39398034
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | |||||||  | | |||||||| || ||||||||||| ||||  || |||| ||||||||||||||||||| | |||||||| |    
T  39397916 atggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagt 39398015  T
Q  211 gacatcaaaagtttagtct 229  Q
    ||||||||||||| |||||    
T  39398016 gacatcaaaagttcagtct 39398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 54499422 - 54499332
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtac-aatgacatcaaaagtttagtctc 230  Q
    |||||||| || ||||||||||| ||||| || |||| ||||||||||||||||||||  ||||||| |||||||||||||||| ||||||    
T  54499422 tgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctc 54499332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 19089634 - 19089549
Alignment:
Q  143 acttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||| ||||||||||| |||| ||| |||| |||  |||||||||||||||| |||||| |||||||||||||||| ||||    
T  19089634 acttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatgacatcaaaagttcagtc 19089549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 32592121 - 32592218
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||||||||| || ||||| |||| ||||| ||||||||| ||||| |||||| | |||||||||||||| |||| || ||||||    
T  32592121 tgacttttttgatgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacatcaaaagttcagtccccttagtat 32592218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 25701253 - 25701153
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | ||||||||||| | ||||||||||||||  || |||| ||| ||||||||||||| ||| |||||||| |||||||||||||| |||    
T  25701253 gaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtttgtacagtgacatcaaaagttcagt 25701154  T
Q  228 c 228  Q
    |    
T  25701153 c 25701153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 36493897 - 36493774
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| |||| | ||||||||| ||||||||| | ||||  || |||||| | ||||||||||||||| | |||||||| |||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| |||| || ||||||    
T  36493797 tcaaaagttcagtccccatagtat 36493774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 55241317 - 55241190
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | ||||||| || | |||||||| |  ||||||||| | |||| ||| |||| ||||| ||||||||||||||| |||||||| |    
T  55241317 atggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagt 55241218  T
Q  211 gacatcaaaagtttagtctccgtagtat 238  Q
    | ||||||||||| |||| || ||||||    
T  55241217 ggcatcaaaagttcagtccccatagtat 55241190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 30002820 - 30002710
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||  ||| ||| |||| || ||||||||||| | ||| || |||| |||||||||||||||| |||| |||||||| |||||||||||||| |||    
T  30002820 gaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacagtgacatcaaaagttcagt 30002721  T
Q  228 ctccgtagtat 238  Q
    || | ||||||    
T  30002720 cttcttagtat 30002710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 7703545 - 7703642
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||||| || ||||||||||| ||||  || |||| |||||| |||||||||||||| |||||||  |||||||||||||| |||| || ||||||    
T  7703545 tgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtgacatcaaaagttcagtccccatagtat 7703642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 25184113 - 25184223
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | ||||| ||||| ||||||||||| ||||  || ||||||||  |||||||||| | ||| ||||||||||||    
T  25184113 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 25184212  T
Q  213 catcaaaagtt 223  Q
    |||| ||||||    
T  25184213 catccaaagtt 25184223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 32912791 - 32912681
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||||| | |||||||| |||||    
T  32912791 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaatga 32912692  T
Q  213 catcaaaagtt 223  Q
     ||||||||||    
T  32912691 tatcaaaagtt 32912681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 37287766 - 37287844
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| | ||||||||| ||||  || |||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  37287766 ttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagtt 37287844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 879727 - 879634
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||| |||||| |||| ||||  || ||||||||  ||||||||||| || | ||||||||||||||||||||||||| ||| | ||||||    
T  879727 ttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatgacatcaaaagtttaatcttcatagtat 879634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 47253751 - 47253863
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | ||||||| || | ||||||||||| ||||||||||| ||||  || |||| |||||||||||||| |||| | ||| |||| |||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  215 tcaaaagtttagtc 228  Q
    ||||||||| ||||    
T  47253850 tcaaaagttcagtc 47253863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 34948293 - 34948193
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | |||||||| ||  |||||||||| ||||  || |||| ||||||||||||||||||||| |||||| | || ||||||||||| |||    
T  34948293 gaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggcatcaaaagttcagt 34948194  T
Q  228 c 228  Q
    |    
T  34948193 c 34948193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 37663881 - 37663837
Alignment:
Q  184 tgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  37663881 tgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 37663837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 4598021 - 4598107
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||| || ||||||||||| ||||  || |||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||    
T  4598021 tgacttttctggtgaagttaacactataacatcaaag-tgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcagtc 4598107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 23761114 - 23761197
Alignment:
Q  155 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||| ||||  || |||| |||||||||||||||| |||| |||||| | |||||||||||||| |||| || ||||||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtat 23761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 29584381 - 29584286
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||||| || ||||||||||| ||||  || |||| |||||  ||||||||| |||| ||||||||||| ||||||||||| ||||| | ||||||    
T  29584381 tgacttttctggtgaagttaacactataacatcaaaagtgttg--agtaacacctcactgtttgtacaatggcatcaaaagttcagtcttcatagtat 29584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 35025784 - 35025674
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| |||| ||| |||| || |||||| |||| ||||| || |||| ||| ||||||| ||||||||| ||| |||  |||||||||||||| |||    
T  35025784 gaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttgacatcaaaagttcagt 35025685  T
Q  228 ctccgtagtat 238  Q
    |  ||||||||    
T  35025684 cctcgtagtat 35025674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 50697242 - 50697352
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||| | |||||||  ||| ||| ||||||  |||||| |||| ||||  ||||||||| |   ||||||||||| ||  ||||||||||||    
T  50697242 ggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtacaatga 50697341  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  50697342 catcaaaagtt 50697352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 4396326 - 4396411
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac 198  Q
    |||||||||||  | |||||||  ||| ||||||||||  ||||||||||| ||||  |||||||||||  |||||||||||||||    
T  4396326 ggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacaccccac 4396411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 28003199 - 28003082
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||||||  | ||||||| || | |||||||| || |||||| |||| ||||| || |||| ||| || ||||  || ||||| |||||||| |    
T  28003199 atggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagt 28003100  T
Q  211 gacatcaaaagtttagtc 228  Q
    ||||||||||||| ||||    
T  28003099 gacatcaaaagttcagtc 28003082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 50764791 - 50764840
Alignment:
Q  174 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||||    
T  50764791 aaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagtt 50764840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 19440864 - 19440744
Alignment:
Q  109 atatggaaaattctactgggaa-gtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtac 207  Q
    |||||||||||||||  | ||| |||| || | ||||||||||| ||| ||||||| ||||  || ||||||||  ||| |||||| ||||  |||||||    
T  19440864 atatggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtac 19440765  T
Q  208 aatgacatcaaaagtttagtc 228  Q
    |||| ||||||||||| ||||    
T  19440764 aatggcatcaaaagttcagtc 19440744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 46888353 - 46888253
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| |||| | |||||| || ||||||||| | ||||  || |||| ||| |||||||| |||||||||||||||||  | ||||||||||| |||    
T  46888353 gaagtcaagaaaataacttttctgatgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagt 46888254  T
Q  228 c 228  Q
    |    
T  46888253 c 46888253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 3042611 - 3042718
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||| |||  ||| ||| ||||||| ||||||||||| ||||  ||| |||||||  ||||||| |||||||  ||| ||||||||    
T  3042611 ggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgtttatacaatga 3042710  T
Q  213 catcaaaa 220  Q
    ||||||||    
T  3042711 catcaaaa 3042718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 55478106 - 55477987
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac----tatttgtaca 208  Q
    |||||||||||  | ||||||| || | ||| ||||||| ||||||||||| ||||  || ||||||||   ||||||||| ||||    | ||||||||    
T  55478106 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgtaca 55478007  T
Q  209 atgacatcaaaagtttagtc 228  Q
    ||||||||||||||| ||||    
T  55478006 atgacatcaaaagttcagtc 55477987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 4934360 - 4934303
Alignment:
Q  167 tagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||||||| |||||||||| ||||| | |||||||| || |||||||||||    
T  4934360 tagtataaaaaatgtagtgagtaacacccccattgtttgtacactggcatcaaaagtt 4934303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 33816704 - 33816619
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    |||||| |||||| ||| || |||| ||| ||||||| |||| |||||||| |||  || ||||||||||| ||||||| ||||||    
T  33816704 tgaagtcaacattgtagcatcaaaagtgtagtgagtagcacctcactatttatacggtggcatcaaaagttcagtctccatagtat 33816619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 134 - 249
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||||||| |||||||| || ||||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||     
T  134 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatgg 233  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  234 catcaaaagttcagtc 249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 94545 - 94457
Alignment:
Q  136 gaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagttt 224  Q
    |||| |||||||| || ||||||||||||||||  || |||| ||| ||||||||||||||||| |||||||| || ||||||||||||    
T  94545 gaaaatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagttt 94457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 238690 - 238568
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||  | |||||||||||| | ||||||||| ||||||||||| |||||||| |||||||||||||||||||  ||||| ||||||||||||||    
T  238690 aaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaaca-tccactgtttgtacaatgaca 238592  T
Q  215 tcaaaagtttagtctccgtagtat 238  Q
    ||||||||| |||| || ||||||    
T  238591 tcaaaagttcagtccccatagtat 238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 15752022 - 15752140
Alignment:
Q  110 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 209  Q
    |||| |||||||||  | ||||||| || | ||||||||||| ||||||||||| ||||  ||||||||| | |||||||||||| |||| |||||||||    
T  15752022 tatgaaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaa 15752121  T
Q  210 tgacatcaaaagtttagtc 228  Q
    || ||||||||||| ||||    
T  15752122 tggcatcaaaagttcagtc 15752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 47279200 - 47279300
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    ||||||| || | ||| ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||| || |||| |||||| |||    
T  47279200 gaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagttcagt 47279299  T
Q  228 c 228  Q
    |    
T  47279300 c 47279300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 11742502 - 11742415
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||| || ||||||||||| |||| ||| |||| |||||| |||||||||||||| |||||||| |||||||||||||| ||||    
T  11742502 tgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacagtgacatcaaaagttcagtc 11742415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 38823209 - 38823320
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | ||||||| || | |||||||| || | ||||||||| ||||| || |||| ||||| |||||||||||||||||||||||| ||    
T  38823209 tggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtg 38823308  T
Q  212 acatcaaaagtt 223  Q
     |||||||||||    
T  38823309 tcatcaaaagtt 38823320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 1547283 - 1547393
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||  ||||||||||||||||||||||| ||||| ||||| || ||     
T  1547283 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcagtgg 1547382  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  1547383 catcaaaagtt 1547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 10922755 - 10922833
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||||| ||||  |||||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  10922755 ttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgacatcaaaagtt 10922833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 32267058 - 32267140
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||  ||||||||||| ||||  || ||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  32267058 tgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagtt 32267140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 42721031 - 42721145
Alignment:
Q  109 atatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 208  Q
    |||||||||||||||  | ||||||| |||| ||| ||||||| |||||||| |  ||||  ||||||||| | ||||||||||||||||| ||||||||    
T  42721031 atatggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtaca 42721130  T
Q  209 atgacatcaaaagtt 223  Q
     | ||||||||||||    
T  42721131 gtaacatcaaaagtt 42721145  T

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Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 48620673 - 48620758
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||||| |||||||| |||||||||||||| |||| || ||||||    
T  48620673 tgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtccccttagtat 48620758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 2959744 - 2959859
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| ||||  || |||| ||| || ||||||| |||||| |||||||| |||    
T  2959744 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtga 2959843  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  2959844 catcaaaagttcagtc 2959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 9903211 - 9903124
Alignment:
Q  136 gaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    |||| ||||||||||| ||||||||||| ||||  || |||| ||| |||||||||||||| || |||||||| ||||||||||||||    
T  9903211 gaaaatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagtt 9903124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 18422647 - 18422762
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  ||| ||||||||||| ||||||||||| ||||  || |||||| |   ||||||||||||||  ||||||||||||    
T  18422647 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatga 18422746  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  18422747 catcaaaagttcagtc 18422762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 51128884 - 51128970
Alignment:
Q  142 gacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||||  ||||||||||| ||||  |||||||||||  |||||||||| ||||  ||||||||||||||||||||||| ||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtc 51128970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 27267378 - 27267254
Alignment:
Q  111 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 210  Q
    |||||||||| || || ||||||| || | ||| ||||||| ||||||||||| ||  | ||||||||||| |||||| |||||||||| |||||||| |    
T  27267378 atggaaaattata-tgtgaagtcatgagaatgatttttttggtgaagttaacacta--gcataaaaaatgtagtgagtgacaccccactgtttgtacagt 27267282  T
Q  211 gacatcaaaagtttagtctccgtagtat 238  Q
    | ||| ||||||| ||||||| ||||||    
T  27267281 ggcattaaaagttcagtctccatagtat 27267254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 28564938 - 28564846
Alignment:
Q  136 gaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||| ||| ||||||| ||||||||||| ||||  || ||||||||  |||||||||||  ||| ||||||||||||||||||||||| ||||    
T  28564938 gaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagttcagtc 28564846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 7079226 - 7079167
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccacta 200  Q
    ||||||||||| ||||||||||| |||| ||| |||| ||||||||||||||||||||||    
T  7079226 tgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccacta 7079167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 10182188 - 10182073
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| ||||||||||| ||||||||| | | ||  ||||||||| | ||| ||||||| ||||| |||||||| ||     
T  10182188 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtgg 10182089  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  10182088 catcaaaagttcagtc 10182073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 30254448 - 30254534
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||||||||||||||||| ||||  || ||||||||  ||||||| | | |||| ||||||||||||||||||||||| ||||    
T  30254448 tgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cacactgtttgtacaatgacatcaaaagttcagtc 30254534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 23999375 - 23999453
Alignment:
Q  145 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| ||||||||||| || |  ||||||||| |   |||||||||||||||||||||| ||||||||||||||||    
T  23999375 ttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatgacatcaaaagtt 23999453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 15382929 - 15383054
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||| |  ||| ||||||||||| |||| |||||| ||||  || ||||||||  ||||||||| |||||  |||||||||||     
T  15382929 ggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaatgt 15383028  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||  ||||||||    
T  15383029 catcaaaagttcagtcatcgtagtat 15383054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 21289726 - 21289783
Alignment:
Q  171 ataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||||| ||||||||||||||||| |||||||| || ||||||||||| ||||    
T  21289726 ataaaaaatgtagtgagtaacaccccactgtttgtacagtggcatcaaaagttcagtc 21289783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 32216091 - 32216176
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 238  Q
    ||||||||||| ||||  || |||||||| ||||||||||| ||||| ||||||||||| | ||||||||| ||||  ||||||||    
T  32216091 tgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtat 32216176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 37451297 - 37451397
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 227  Q
    |||||||  ||| ||||||||||| | ||||||||| ||||  || ||||||||  | |||||||||| ||  ||||||||||||||||||||||| |||    
T  37451297 gaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagttcagt 37451396  T
Q  228 c 228  Q
    |    
T  37451397 c 37451397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 27533132 - 27533050
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 223  Q
    |||||||| || ||||||||||| ||||| || |||| | ||||| |||||| |||||| |||||||| || |||||||||||    
T  27533132 tgacttttctggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatcaaaagtt 27533050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 3534968 - 3535057
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtattatc 242  Q
    ||||||||||| ||||  || |||| ||||||||||||||||  ||| ||||| || |||||||||||||| |||| || || |||||||    
T  3534968 tgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatc 3535057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 37619048 - 37618964
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaa--caccccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||||||| ||||||||||| ||||  || |||||| |  |||||||  ||||||||| |||||| ||||||||||||||||    
T  37619048 tgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaaatgacatcaaaagtt 37618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 39393379 - 39393504
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||| | ||||| | || | |||||||| |  ||||||||||| ||||| || |||| |||||||||||| ||  || | |||||||| ||     
T  39393379 ggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgtttgtacagtgg 39393478  T
Q  213 catcaaaagtttagtctccgtagtat 238  Q
    ||||||||||||| || || ||||||    
T  39393479 catcaaaagtttaatccccatagtat 39393504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 47682658 - 47682564
Alignment:
Q  128 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacac-cccactatttgtacaatgacatcaaaagtt 223  Q
    ||||||| || | ||||||||||| ||||||||||| ||  | ||||||||||||||||||||||| ||||||  ||||||| ||  ||||||||||    
T  47682658 gaagtcatgagagtgacttttttggtgaagttaacacta--gcataaaaaatgttgtgagtaacactcccactgcttgtacagtggtatcaaaagtt 47682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 3309135 - 3309253
Alignment:
Q  104 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 203  Q
    |||||| |||||||||||||  |  |||||| || | |||||||| || | ||||||||| ||||  || |||| |||||||||||||| |||||| |||    
T  3309135 tttaaaaatggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaaca-cccactgttt 3309233  T
Q  204 gtacaatgacatcaaaagtt 223  Q
    ||||| ||  ||||||||||    
T  3309234 gtacagtggtatcaaaagtt 3309253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 16415641 - 16415752
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccc-cactatttgtacaatg 211  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| ||| |||||||||||||  | | |||||||| ||    
T  16415641 ggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacagtg 16415740  T
Q  212 acatcaaaagtt 223  Q
     |||||||||||    
T  16415741 gcatcaaaagtt 16415752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 34012557 - 34012442
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | ||||||| |||| |||| ||| || ||||||||||| ||||  || || | ||| ||||||||||| ||||| |||||| | ||     
T  34012557 ggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34012458  T
Q  213 catcaaaagtttagtc 228  Q
    ||||||||||| ||||    
T  34012457 catcaaaagttcagtc 34012442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 19899949 - 19899839
Alignment:
Q  113 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 212  Q
    |||||||||||  | |||||||  | | ||| ||||||| ||||||||||| ||||  || ||||||||   |||||||||| |||| |||||| ||||     
T  19899949 ggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatgg 19899850  T
Q  213 catcaaaagtt 223  Q
    |||||||||||    
T  19899849 catcaaaagtt 19899839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 30327133 - 30327017
Alignment:
Q  112 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 211  Q
    ||||||||||||  | |||||||  ||| ||||||||||  |||| |||||| ||||  || ||||||||  ||||||| |||| ||  ||||||||||     
T  30327133 tggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaata 30327034  T
Q  212 acatcaaaagtttagtc 228  Q
     ||||||||||| ||||    
T  30327033 gcatcaaaagttcagtc 30327017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 146199 - 146091
Alignment:
Q  115 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 214  Q
    |||||||||| | |||||||  | | ||| ||||||| | ||||||||||||||  |||||||||||  |||||||||||||| |||||||| |||||||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  215 tcaaaagtt 223  Q
    |||||||||    
T  146099 tcaaaagtt 146091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 7915 - 8002
Alignment:
Q  141 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    ||||||||||| ||||||||||| ||||  || |||| |||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  7915 tgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 43986 - 44072
Alignment:
Q  142 gacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||||| ||||||||||  |||| ||| ||||||||  |||||||||||||  | ||||||||||| ||| ||||||| ||||    
T  43986 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggcataaaaagttcagtc 44072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 154801 - 154715
Alignment:
Q  142 gacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 228  Q
    |||||||||| ||||||||||  |||| ||| ||||||||  |||||||||||||  | ||||||||||| ||| ||||||| ||||    
T  154801 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggcataaaaagttcagtc 154715  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 42388 - 42439
Alignment:
Q  153 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttg 204  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||||||||||    
T  42388 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttg 42439  T

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