View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5410-Insertion-5 (Length: 925)

Name: NF5410-Insertion-5
Description: NF5410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5410-Insertion-5
NF5410-Insertion-5
[»] chr5 (5 HSPs)
chr5 (511-900)||(25110453-25110846)
chr5 (511-900)||(25169545-25169938)
chr5 (10-113)||(33852987-33853090)
chr5 (740-806)||(33852353-33852419)
chr5 (559-606)||(33852496-33852543)
[»] chr1 (3 HSPs)
chr1 (8-533)||(21354338-21354863)
chr1 (589-806)||(21354886-21355107)
chr1 (456-527)||(24307717-24307788)
[»] chr4 (3 HSPs)
chr4 (8-176)||(10992715-10992883)
chr4 (734-824)||(10988263-10988353)
chr4 (11-65)||(42066555-42066609)
[»] chr6 (1 HSPs)
chr6 (783-887)||(4790474-4790580)
[»] scaffold0001 (2 HSPs)
scaffold0001 (8-201)||(199368-199561)
scaffold0001 (457-824)||(198745-199112)
[»] scaffold0196 (1 HSPs)
scaffold0196 (734-824)||(31581-31671)
[»] chr8 (4 HSPs)
chr8 (734-824)||(21407591-21407681)
chr8 (734-824)||(21802083-21802173)
chr8 (736-824)||(27916395-27916483)
chr8 (736-824)||(27962814-27962902)
[»] chr3 (1 HSPs)
chr3 (554-613)||(51882395-51882454)
[»] scaffold0005 (1 HSPs)
scaffold0005 (8-80)||(281564-281636)
[»] chr2 (1 HSPs)
chr2 (11-110)||(32132348-32132447)


Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 511 - 900
Target Start/End: Complemental strand, 25110846 - 25110453
Alignment:
Q  511 attcctattgtttggaagactccgaccaacccttggataaaggctaatacggacgggtcggttaggcatttgatggccgcttgcggtggtatttttcgag 610  Q
    |||||| |||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  25110846 attcctgttgtttggaaggttccaactaacccttggataaaggctaatacggacgggtcggttaggcatttgatggctacttgcggtggtattttttgag 25110747  T
Q  611 attcacggggaactattttaggtggtttctctagcaatattggtatggtttctatctttgaagcggaaattttgggcctccttctggccatagaatatgc 710  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25110746 attcacggggaacttttttaggtggtttcgctagcaatattggtatggtttctatctttgaagcggaaattttgggcctcctactggccatagaatatgc 25110647  T
Q  711 ggtcatcaacaggtggtctcatgtatggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaac 810  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||     
T  25110646 ggtcatcaacatgtggtctcatttatggcttgaaagtgattctattagtgcggttcaagccttccataaaccatctcttattcctatttgtcttcggaag 25110547  T
Q  811 aggtggcataattgctctc-aactaatttgtttctcatttgctcgcatatcttccgcgaagg-aatgtttgtgctgatg--cttgctgctttgg 900  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  25110546 aggtggcataattgctctcaaaataatttgtttctcatttgctcgcatatcttccgcgaaggaaatgtttgtgctgatggccttgctgctttgg 25110453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 511 - 900
Target Start/End: Complemental strand, 25169938 - 25169545
Alignment:
Q  511 attcctattgtttggaagactccgaccaacccttggataaaggctaatacggacgggtcggttaggcatttgatggccgcttgcggtggtatttttcgag 610  Q
    |||||| |||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  25169938 attcctgttgtttggaaggttccaactaacccttggataaaggctaatacggacgggtcggttaggcatttgatggctacttgcggtggtattttttgag 25169839  T
Q  611 attcacggggaactattttaggtggtttctctagcaatattggtatggtttctatctttgaagcggaaattttgggcctccttctggccatagaatatgc 710  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25169838 attcacggggaacttttttaggtggtttcgctagcaatattggtatggtttctatctttgaagcggaaattttgggcctcctactggccatagaatatgc 25169739  T
Q  711 ggtcatcaacaggtggtctcatgtatggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaac 810  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||     
T  25169738 ggtcatcaacatgtggtctcatttatggcttgaaagtgattctattagtgcggttcaagccttccataaaccatctcttattcctatttgtcttcggaag 25169639  T
Q  811 aggtggcataattgctctc-aactaatttgtttctcatttgctcgcatatcttccgcgaagg-aatgtttgtgctgatg--cttgctgctttgg 900  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  25169638 aggtggcataattgctctcaaaataatttgtttctcatttgctcgcatatcttccgcgaaggaaatgtttgtgctgatggccttgctgctttgg 25169545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 33853090 - 33852987
Alignment:
Q  10 ccttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagcttccaacagatgaaaatttacagttgcgaggctgcactttagttt 109  Q
    ||||| ||||||||||||||||||||| || | | |||||| || || |||||||| ||||| |||||||||||||||| | | ||||||||||| ||||    
T  33853090 ccttgtattcctccgtcccattcctttcttctctagcggttaattttatccaagctcccaacggatgaaaatttacagtcgaggggctgcactttggttt 33852991  T
Q  110 ccat 113  Q
    ||||    
T  33852990 ccat 33852987  T

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Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 806
Target Start/End: Complemental strand, 33852419 - 33852353
Alignment:
Q  740 ttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcg 806  Q
    |||||| |||||||  | |||| ||||| || ||||||||||||||||||||||||||| |||||||    
T  33852419 ttgaaagtgattcttcttgtgcagttcaagctttccataaaccatctcttattcctatttgtcttcg 33852353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 33852543 - 33852496
Alignment:
Q  559 acggacgggtcggttaggcatttgatggccgcttgcggtggtattttt 606  Q
    |||||||||||||||||  |||| ||||| ||||||||||||||||||    
T  33852543 acggacgggtcggttagaaattttatggctgcttgcggtggtattttt 33852496  T

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Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 533
Target Start/End: Original strand, 21354338 - 21354863
Alignment:
Q  8 gtccttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagcttccaacagatgaaaatttacagttgcgaggctgcactttagt 107  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||   | ||||||||||| ||    
T  21354338 gtcctcgcattcctccgtcccactcctttatcttttggcggttcatgttatccaagcttccaacagatgagaatttacagtcaaggggctgcactttggt 21354437  T
Q  108 ttccatgtgtcctctatgttccaagcagaaagaatcatctactcacttatttctggaatgtcctttctctaataccatctggttatggctcggcgtcaag 207  Q
    |||||||||||   ||||||| |||||    ||||| || || || ||||||||||| ||  |||||||| || | || |||   ||||||| | |||||    
T  21354438 ttccatgtgtctgttatgttcgaagcatgctgaatcttcaacacatttatttctggagtgcactttctctcattctatttggcagtggctcgacatcaag 21354537  T
Q  208 ctacaaagaccaatctcccggtattctccatctgcgctgctgtcctgcatcccgctgcgttgcagctcgcagcttcgtgatgtgctggtcgcagccattg 307  Q
    || ||   | | |||||||    ||| ||  |  |||||||| | ||  | || | ||| |||||||| ||||| |||||||| || |  || || || |    
T  21354538 cttcagcaaaccatctcccttgcttcacccacatcgctgctgccttgtgttccacagcgctgcagctctcagctgcgtgatgtccttgcagctgcaatag 21354637  T
Q  308 tgcatacggttcactctatttggctggcacggaatgcagtccgttttaatgcagcatccatctcattgcatgcgacgttggcaaagatttcatcattgat 407  Q
    |||| ||||| ||| | |||||||| ||  | || |  || || || ||||||||   ||| ||  |||||||||| |||||||||||||| ||  ||||    
T  21354638 tgcacacggtgcacaccatttggcttgccagaaaagttgttcggttcaatgcagcccacatatccctgcatgcgacattggcaaagatttcttcgctgat 21354737  T
Q  408 tgcattgtcgggagrcctctccaaaggttattgtttaaatatagatgttgttattttggaaaatctgtttgtctctccttatcataggcgtgtccgagac 507  Q
    |||  ||||||||| | | ||||||||||| ||||||  |   |||||||| |||||||||||| ||||||| |||||||  |||||||| || || |||    
T  21354738 tgctatgtcgggaggcatttccaaaggttactgtttattttcggatgttgtaattttggaaaatttgtttgtttctcctttacataggcgggttcgtgac 21354837  T
Q  508 attattcctattgtttggaagactcc 533  Q
    ||||| ||  ||||||||||| ||||    
T  21354838 attataccagttgtttggaaggctcc 21354863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 589 - 806
Target Start/End: Original strand, 21354886 - 21355107
Alignment:
Q  589 gcttgcggtggtatttttcgagattcacggggaactattttaggtggtttctctagcaatattggtatggtttctatctttgaagcggaaattttgggcc 688  Q
    |||||||||||| ||||||| || || |  |||||| || | ||||||||  |||| || ||||||  ||||||||||||  |||| ||||||||||| |    
T  21354886 gcttgcggtggtctttttcgtgactctcatggaacttttcttggtggttttgctagtaacattggttcggtttctatcttcaaagcagaaattttgggac 21354985  T
Q  689 tccttctggccatagaatatgcggtcatcaac-----aggtggtctcatgtatggcttgaaactgattctattagtgcggttcacgccttccataaacca 783  Q
    || |  |||  ||||||||||||| ||||||      || ||||||||| ||||||||||||  || |||  |||||||||||| || ||||||||||||    
T  21354986 tcataatggttatagaatatgcgg-catcaaacagctagctggtctcatttatggcttgaaagcgactcttctagtgcggttcaggctttccataaacca 21355084  T
Q  784 tctcttattcctattcgtcttcg 806  Q
    |||||||||||| || |||||||    
T  21355085 tctcttattcctgtttgtcttcg 21355107  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 24307788 - 24307717
Alignment:
Q  456 tgttattttggaaaatctgtttgtctctccttatcataggcgtgtccgagacattattcctattgtttggaa 527  Q
    |||||| |||||||||||||||||  | |||  ||||||||||||| | |||||||||||  ||||||||||    
T  24307788 tgttatattggaaaatctgtttgttccccctcttcataggcgtgtctgggacattattccggttgtttggaa 24307717  T

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Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 8 - 176
Target Start/End: Complemental strand, 10992883 - 10992715
Alignment:
Q  8 gtccttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagcttccaacagatgaaaatttacagttgcgaggctgcactttagt 107  Q
    |||| ||||| ||||| ||||| || ||| | ||||||||||| ||||| |||||||||||||| |||||||||||||| ||| | |||||||| || ||    
T  10992883 gtccctgcatccctccatcccactcttttatattttggcggtttatgttatccaagcttccaacggatgaaaatttacaattgaggggctgcaccttggt 10992784  T
Q  108 ttccatgtgtcctctatgttccaagcagaaagaatcatctactcacttatttctggaatgtcctttctc 176  Q
    ||||||||||||  |||| |  || |||   ||||||||||||||||||||||| |||||| |||||||    
T  10992783 ttccatgtgtcccttatgctataaccaggcggaatcatctactcacttatttcttgaatgtgctttctc 10992715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 734 - 824
Target Start/End: Complemental strand, 10988353 - 10988263
Alignment:
Q  734 tatggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
    |||||||||||| |||||||  |||||||||||| || |||||||||||||||||||||||  || ||||||||||| | |||||||||||    
T  10988353 tatggcttgaaagtgattcttctagtgcggttcaagctttccataaaccatctcttattccggttagtcttcgcaaccgttggcataattg 10988263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 42066555 - 42066609
Alignment:
Q  11 cttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagct 65  Q
    ||||||| |||||||| || |||||| ||||||||||| ||||| ||||||||||    
T  42066555 cttgcatccctccgtcacactcctttattttttggcggctcatgctgtccaagct 42066609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 783 - 887
Target Start/End: Complemental strand, 4790580 - 4790474
Alignment:
Q  783 atctcttattcctattcgtcttcgcaacaggtggcataattgctctcaactaa-tttgtttctcatttgctcgcatatcttccgcgaagg-aatgtttgt 880  Q
    ||||||||||||||||| |||||| |||||||||||||| || ||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  4790580 atctcttattcctattcttcttcggaacaggtggcataactgttctcaaaaaaatttgtttctcatttgctcgcatatcttccgcgaaggaaatgtttgt 4790481  T
Q  881 gctgatg 887  Q
    | |||||    
T  4790480 gttgatg 4790474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 199561 - 199368
Alignment:
Q  8 gtccttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagcttccaacagatgaaaatttacagttgcgaggctgcactttagt 107  Q
    |||| ||||| ||||| ||||| || ||| | |||||||  || ||||| |||||||||||||| |||||||||||||| ||| | |||||||| || ||    
T  199561 gtccctgcatccctccatcccactcttttatattttggcattttatgttatccaagcttccaaccgatgaaaatttacaattgaggggctgcaccttggt 199462  T
Q  108 ttccatgtgtcctctatgttccaagcagaaagaatcatctactcacttatttctggaatgtcctttctctaataccatctggttatggctcggc 201  Q
    ||||||||||||  |||| |  || |||    |||||||||||||||||||||| |||||| ||||||| || || || ||||  |||||||||    
T  199461 ttccatgtgtcccttatgctataaccaggcgtaatcatctactcacttatttcttgaatgtgctttctccaaaactatatggtattggctcggc 199368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 457 - 824
Target Start/End: Complemental strand, 199112 - 198745
Alignment:
Q  457 gttattttggaaaatctgtttgtctctccttatcataggcgtgtccgagacattattcctattgtttggaagactccgaccaacccttggataaaggcta 556  Q
    ||||||||||||||||||||||| || || |  || || || || || ||||| |||||  |||| ||| || | || |||| ||||||| | ||||| |    
T  199112 gttattttggaaaatctgtttgtttcccccttgcacagtcgggtacgggacatcattccggttgtgtggcagccccctaccagcccttgggtcaaggcca 199013  T
Q  557 atacggacgggtcggttaggcatttgatggccgcttgcggtggtatttttcgagattcacggggaactattttaggtggtttctctagcaatattggtat 656  Q
    | || || ||||||||| |  |||| ||||| ||||| |||||| | || || || || ||  ||||| || | ||||||||| | |||||| |||| ||    
T  199012 acacagatgggtcggttcgaaatttaatggctgcttgtggtggtgtcttccgtgactctcgctgaacttttcttggtggtttcacaagcaatcttggcat 198913  T
Q  657 ggtttctatctttgaagcggaaattttgggcctccttctggccatagaatatgc--ggtcatcaacaggtggtctcatgtatggcttgaaactgattcta 754  Q
     |||| | ||||  |||| |||||  |||||||| || |||| || ||||||||  | |||  ||||| ||| ||| | |||||||||||| |||||||     
T  198912 agtttttgtcttccaagcagaaatcatgggcctcattttggctatggaatatgcaagttca--aacagctggactcgtttatggcttgaaagtgattctt 198815  T
Q  755 ttagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
     ||||||||| || || |||||| ||||||||||||||||  || ||||||||||| | |||||||||||    
T  198814 ctagtgcggtacaagctttccatcaaccatctcttattccggttggtcttcgcaaccgttggcataattg 198745  T

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Target: scaffold0196 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 734 - 824
Target Start/End: Complemental strand, 31671 - 31581
Alignment:
Q  734 tatggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
    |||||||||||| |||||||  |||||||||||| || |||||||||||||||||||||||  || ||||||||||| | |||||||||||    
T  31671 tatggcttgaaagtgattcttctagtgcggttcaagctttccataaaccatctcttattccggttagtcttcgcaaccgttggcataattg 31581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 734 - 824
Target Start/End: Complemental strand, 21407681 - 21407591
Alignment:
Q  734 tatggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
    |||||||||||| |||||||  ||||||||| || || |||||||||| ||||||||||||  || ||||||||||| | |||||||||||    
T  21407681 tatggcttgaaagtgattcttctagtgcggtacaagctttccataaacaatctcttattccggttggtcttcgcaaccgttggcataattg 21407591  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 734 - 824
Target Start/End: Complemental strand, 21802173 - 21802083
Alignment:
Q  734 tatggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
    |||||||||||| |||||||  ||||||||| || || |||||||||| ||||||||||||  || ||||||||||| | |||||||||||    
T  21802173 tatggcttgaaagtgattcttctagtgcggtacaagctttccataaacaatctcttattccggttggtcttcgcaaccgttggcataattg 21802083  T

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Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 736 - 824
Target Start/End: Original strand, 27916395 - 27916483
Alignment:
Q  736 tggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
    ||||||||||  ||||||  ||||||||| || || ||||||||||||||||||||||   || ||||||||||| | |||||||||||    
T  27916395 tggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattcaggttggtcttcgcaaccgttggcataattg 27916483  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 736 - 824
Target Start/End: Original strand, 27962814 - 27962902
Alignment:
Q  736 tggcttgaaactgattctattagtgcggttcacgccttccataaaccatctcttattcctattcgtcttcgcaacaggtggcataattg 824  Q
    ||||||||||  ||||||  ||||||||| || || ||||||||||||||||||||||   || ||||||||||| | |||||||||||    
T  27962814 tggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccgttggcataattg 27962902  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 613
Target Start/End: Original strand, 51882395 - 51882454
Alignment:
Q  554 ctaatacggacgggtcggttaggcatttgatggccgcttgcggtggtatttttcgagatt 613  Q
    |||| |||||||||||||||||  |||||||| |||||||||||||||||||||| ||||    
T  51882395 ctaacacggacgggtcggttagaaatttgatgtccgcttgcggtggtatttttcgtgatt 51882454  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 281564 - 281636
Alignment:
Q  8 gtccttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagcttccaacagatgaaaa 80  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||  || |||| ||||| || || ||||||||    
T  281564 gtccttgtattcctccgtcacattcctttgttttctggcggttgttgctgtctaagctccccacggatgaaaa 281636  T

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Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 32132447 - 32132348
Alignment:
Q  11 cttgcattcctccgtcccattcctttgttttttggcggttcatgttgtccaagcttccaacagatgaaaatttacagttgcgaggctgcactttagtttc 110  Q
    ||||||||||||| || ||||| |||||||| |||||  | |||||||| ||||| ||||| ||||| || ||||   |||| |||||||| ||||||||    
T  32132447 cttgcattcctccctcacattcttttgttttctggcgcatgatgttgtctaagctcccaactgatgagaacttacgaatgcggggctgcaccttagtttc 32132348  T

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