View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5410_low_9 (Length: 336)
Name: NF5410_low_9
Description: NF5410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5410_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 52 - 330
Target Start/End: Complemental strand, 31594286 - 31594008
Alignment:
| Q |
52 |
aactatacacttgctagcaaaattgatatagttgctacaaattatgaatcacatacgagatgacccctgaaataagcttgaatcttaattgctgcaaagt |
151 |
Q |
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| T |
31594286 |
aactatatacttgctagcaatattgatatagttgctacaaattatgaatcacatactagatgacccctgaaataagcttgaatcttaattgctgcaaagt |
31594187 |
T |
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| Q |
152 |
cttctttggtgaatatggtcgatgaagaattaatagctggtggtggcaagatgataaaattttctctggtggtggttgattcatttccaactatggcttg |
251 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
31594186 |
cttctttggtgaatatggtcaatgaagaattaatagctggtggtggcaagatgataaaattttctctggtggtggttgattcatttccaagtatggcttg |
31594087 |
T |
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| Q |
252 |
ttccttttgatttgtgcaaacacttatacatggatggagagttatgtctttgttggatgatcttaggaatattcttcga |
330 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
31594086 |
ttccttttgatttgtgcaaacacttatacatggatggagagttatgtctttgttggatgatcttaggaattttcttcga |
31594008 |
T |
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