View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5411-Insertion-2 (Length: 1048)

Name: NF5411-Insertion-2
Description: NF5411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5411-Insertion-2
NF5411-Insertion-2
[»] chr6 (64 HSPs)
chr6 (8-1048)||(9726057-9727111)
chr6 (61-660)||(24215985-24216590)
chr6 (188-660)||(14725863-14726352)
chr6 (61-240)||(14726372-14726552)
chr6 (61-284)||(2587487-2587710)
chr6 (114-256)||(9291227-9291370)
chr6 (119-339)||(19722501-19722735)
chr6 (116-261)||(23644882-23645027)
chr6 (61-235)||(3357389-3357563)
chr6 (107-310)||(22565256-22565459)
chr6 (61-232)||(10504410-10504582)
chr6 (70-224)||(13137164-13137319)
chr6 (405-660)||(2587157-2587413)
chr6 (404-536)||(9291466-9291600)
chr6 (61-140)||(9386979-9387058)
chr6 (62-130)||(24469079-24469147)
chr6 (61-177)||(34479410-34479525)
chr6 (61-177)||(32759324-32759441)
chr6 (853-927)||(23088193-23088267)
chr6 (61-130)||(22409282-22409351)
chr6 (482-536)||(22849963-22850017)
chr6 (61-130)||(14638594-14638663)
chr6 (61-126)||(14722973-14723038)
chr6 (61-124)||(19578245-19578308)
chr6 (71-130)||(20144098-20144157)
chr6 (71-130)||(22188682-22188741)
chr6 (61-124)||(27123548-27123611)
chr6 (61-131)||(15613309-15613379)
chr6 (61-130)||(1635996-1636065)
chr6 (61-130)||(17822751-17822819)
chr6 (61-126)||(19594686-19594751)
chr6 (61-126)||(21153173-21153238)
chr6 (62-119)||(21846420-21846477)
chr6 (860-904)||(9291850-9291894)
chr6 (63-178)||(14882233-14882344)
chr6 (482-518)||(15466967-15467003)
chr6 (685-820)||(24215750-24215897)
chr6 (757-828)||(24251998-24252070)
chr6 (482-562)||(26214894-26214973)
chr6 (853-935)||(28585888-28585972)
chr6 (61-166)||(8065966-8066073)
chr6 (482-557)||(23087769-23087844)
chr6 (482-561)||(23645233-23645312)
chr6 (482-578)||(10504150-10504247)
chr6 (62-124)||(22412047-22412109)
chr6 (591-660)||(9276845-9276914)
chr6 (105-177)||(9898658-9898730)
chr6 (61-149)||(14075744-14075833)
chr6 (860-904)||(9277133-9277177)
chr6 (860-916)||(31626132-31626188)
chr6 (864-920)||(33655743-33655799)
chr6 (62-176)||(8038699-8038814)
chr6 (845-915)||(9386243-9386314)
chr6 (63-126)||(24479330-24479393)
chr6 (105-139)||(11004799-11004833)
chr6 (69-135)||(18074364-18074430)
chr6 (482-520)||(19245174-19245212)
chr6 (80-126)||(23008418-23008464)
chr6 (80-126)||(23779900-23779946)
chr6 (61-130)||(14078476-14078545)
chr6 (80-149)||(21687892-21687961)
chr6 (85-130)||(23231653-23231698)
chr6 (860-967)||(24188097-24188206)
chr6 (879-920)||(26215264-26215305)
[»] chr1 (74 HSPs)
chr1 (61-694)||(17442640-17443279)
chr1 (68-284)||(16786781-16786998)
chr1 (405-660)||(34481393-34481649)
chr1 (755-938)||(24267542-24267726)
chr1 (153-467)||(17837884-17838216)
chr1 (482-660)||(15299454-15299631)
chr1 (164-337)||(8697947-8698120)
chr1 (61-149)||(16114067-16114155)
chr1 (62-197)||(17120544-17120680)
chr1 (405-660)||(16787137-16787391)
chr1 (85-225)||(34481846-34481986)
chr1 (61-177)||(10063694-10063807)
chr1 (280-526)||(26810454-26810706)
chr1 (63-197)||(27116849-27116984)
chr1 (405-561)||(16113451-16113609)
chr1 (61-156)||(28009115-28009210)
chr1 (61-126)||(18735249-18735314)
chr1 (795-914)||(17837693-17837813)
chr1 (61-166)||(15159514-15159621)
chr1 (61-124)||(21983730-21983793)
chr1 (61-126)||(18528240-18528305)
chr1 (61-126)||(20107171-20107236)
chr1 (61-126)||(21333761-21333826)
chr1 (87-229)||(33713500-33713637)
chr1 (61-163)||(22621176-22621280)
chr1 (61-124)||(24055014-24055077)
chr1 (61-128)||(26612050-26612117)
chr1 (61-140)||(27910201-27910280)
chr1 (64-126)||(18831509-18831571)
chr1 (61-156)||(13267144-13267241)
chr1 (61-130)||(16180038-16180107)
chr1 (71-140)||(25264813-25264882)
chr1 (61-126)||(25403085-25403150)
chr1 (755-827)||(34481210-34481283)
chr1 (61-149)||(12011863-12011951)
chr1 (63-235)||(14239929-14240102)
chr1 (65-149)||(26021721-26021805)
chr1 (240-312)||(27117022-27117094)
chr1 (61-124)||(22623933-22623996)
chr1 (66-196)||(23035693-23035824)
chr1 (424-578)||(7220741-7220896)
chr1 (148-222)||(16113808-16113882)
chr1 (61-131)||(20033819-20033889)
chr1 (61-123)||(21450111-21450173)
chr1 (66-124)||(27545721-27545779)
chr1 (61-126)||(20147514-20147579)
chr1 (61-126)||(21665778-21665843)
chr1 (69-130)||(51471214-51471275)
chr1 (486-522)||(24281873-24281909)
chr1 (61-149)||(27972863-27972951)
chr1 (63-126)||(14780875-14780938)
chr1 (464-536)||(23037459-23037532)
chr1 (482-524)||(12209168-12209210)
chr1 (482-532)||(16360454-16360504)
chr1 (482-520)||(22664759-22664797)
chr1 (482-536)||(26648504-26648558)
chr1 (482-520)||(28008705-28008743)
chr1 (482-536)||(44795950-44796004)
chr1 (65-130)||(16360835-16360900)
chr1 (860-925)||(17017579-17017644)
chr1 (62-126)||(9402626-9402690)
chr1 (598-658)||(13134667-13134727)
chr1 (864-920)||(24306813-24306869)
chr1 (272-362)||(16113654-16113745)
chr1 (61-126)||(17609907-17609969)
chr1 (61-128)||(18826689-18826756)
chr1 (80-196)||(25960208-25960327)
chr1 (482-521)||(33191275-33191314)
chr1 (845-915)||(33712857-33712928)
chr1 (996-1046)||(9401542-9401595)
chr1 (104-197)||(15812193-15812287)
chr1 (937-966)||(3591598-3591627)
chr1 (61-130)||(15543015-15543084)
chr1 (104-196)||(26648076-26648169)
[»] chr3 (68 HSPs)
chr3 (61-980)||(820552-821500)
chr3 (61-532)||(13907310-13907788)
chr3 (70-639)||(6290290-6290857)
chr3 (78-306)||(20398171-20398400)
chr3 (96-284)||(22246141-22246330)
chr3 (566-660)||(20398070-20398164)
chr3 (85-286)||(22471175-22471377)
chr3 (62-197)||(23755104-23755240)
chr3 (61-197)||(23699145-23699282)
chr3 (61-197)||(23717600-23717737)
chr3 (61-197)||(23736056-23736193)
chr3 (404-558)||(27853925-27854080)
chr3 (403-561)||(21018401-21018553)
chr3 (405-712)||(22245701-22246005)
chr3 (61-177)||(23055283-23055399)
chr3 (755-974)||(13908011-13908232)
chr3 (796-982)||(6290012-6290198)
chr3 (61-244)||(20886040-20886225)
chr3 (61-218)||(21019045-21019201)
chr3 (77-228)||(26092136-26092282)
chr3 (61-197)||(8144436-8144573)
chr3 (63-166)||(16244721-16244826)
chr3 (61-126)||(19575232-19575297)
chr3 (61-126)||(25851694-25851759)
chr3 (768-927)||(8556904-8557062)
chr3 (61-167)||(31284998-31285105)
chr3 (482-536)||(3115883-3115937)
chr3 (407-561)||(314611-314767)
chr3 (69-126)||(8882133-8882190)
chr3 (61-130)||(9780916-9780985)
chr3 (61-126)||(20022582-20022647)
chr3 (757-821)||(20397833-20397897)
chr3 (62-146)||(28369495-28369579)
chr3 (62-146)||(28377313-28377397)
chr3 (62-146)||(28385135-28385219)
chr3 (61-124)||(8115955-8116018)
chr3 (61-128)||(16229022-16229089)
chr3 (62-167)||(19910392-19910499)
chr3 (61-166)||(41509461-41509568)
chr3 (493-534)||(8144193-8144234)
chr3 (61-126)||(8171032-8171097)
chr3 (61-130)||(12771915-12771984)
chr3 (61-126)||(14977101-14977166)
chr3 (77-177)||(20338987-20339084)
chr3 (83-193)||(8448024-8448135)
chr3 (482-521)||(12772386-12772425)
chr3 (105-140)||(21084148-21084183)
chr3 (117-251)||(27853631-27853768)
chr3 (486-536)||(16221939-16221989)
chr3 (61-123)||(19169418-19169479)
chr3 (61-131)||(19170835-19170905)
chr3 (61-118)||(2166676-2166733)
chr3 (69-126)||(20121997-20122054)
chr3 (482-522)||(8267537-8267577)
chr3 (105-149)||(12805237-12805281)
chr3 (66-110)||(19533146-19533190)
chr3 (603-655)||(21083703-21083755)
chr3 (860-916)||(21380442-21380498)
chr3 (105-167)||(2722922-2722985)
chr3 (591-638)||(13907835-13907882)
chr3 (482-521)||(16245189-16245228)
chr3 (417-480)||(20885801-20885864)
chr3 (842-935)||(23056009-23056104)
chr3 (104-197)||(3115456-3115550)
chr3 (482-536)||(5508915-5508969)
chr3 (873-915)||(6115354-6115396)
chr3 (104-149)||(8267957-8268002)
chr3 (61-126)||(19909703-19909768)
[»] chr5 (76 HSPs)
chr5 (61-694)||(19762299-19762952)
chr5 (85-388)||(25578977-25579281)
chr5 (191-535)||(26066704-26067053)
chr5 (85-561)||(23265677-23266160)
chr5 (69-284)||(17470309-17470525)
chr5 (405-693)||(9521209-9521499)
chr5 (61-284)||(22871513-22871735)
chr5 (85-284)||(26314519-26314717)
chr5 (62-282)||(17170578-17170798)
chr5 (285-640)||(19085497-19085849)
chr5 (61-284)||(26121524-26121746)
chr5 (288-469)||(18416812-18416997)
chr5 (61-236)||(18226891-18227067)
chr5 (482-660)||(17171022-17171200)
chr5 (482-642)||(17470741-17470900)
chr5 (165-285)||(19081045-19081165)
chr5 (482-660)||(26252265-26252442)
chr5 (61-177)||(13692891-13693004)
chr5 (482-660)||(22871120-22871297)
chr5 (80-140)||(17831015-17831075)
chr5 (65-140)||(22920288-22920363)
chr5 (85-199)||(24266048-24266163)
chr5 (85-199)||(24342679-24342794)
chr5 (148-229)||(24164165-24164246)
chr5 (482-642)||(24260990-24261149)
chr5 (482-653)||(25579340-25579509)
chr5 (61-140)||(28254167-28254246)
chr5 (61-131)||(24188241-24188311)
chr5 (61-126)||(20859687-20859752)
chr5 (405-547)||(24164433-24164577)
chr5 (61-126)||(28665800-28665865)
chr5 (403-515)||(26314273-26314387)
chr5 (860-938)||(15470095-15470172)
chr5 (61-126)||(16522568-16522633)
chr5 (864-971)||(24852041-24852150)
chr5 (61-177)||(20533187-20533300)
chr5 (591-659)||(26314174-26314242)
chr5 (61-128)||(20314489-20314556)
chr5 (69-128)||(24261370-24261429)
chr5 (61-126)||(24321250-24321316)
chr5 (61-131)||(25921240-25921310)
chr5 (61-130)||(17433190-17433259)
chr5 (756-903)||(17474405-17474553)
chr5 (77-146)||(24162786-24162855)
chr5 (65-121)||(23388245-23388301)
chr5 (61-121)||(24659022-24659082)
chr5 (152-240)||(26252694-26252781)
chr5 (61-124)||(19052390-19052453)
chr5 (842-904)||(32417193-32417256)
chr5 (61-131)||(17336956-17337026)
chr5 (772-826)||(24167361-24167415)
chr5 (861-915)||(26307791-26307845)
chr5 (862-923)||(15544220-15544281)
chr5 (62-174)||(18807613-18807721)
chr5 (61-130)||(25401451-25401520)
chr5 (756-832)||(26313982-26314059)
chr5 (862-927)||(29263449-29263514)
chr5 (506-585)||(17337308-17337388)
chr5 (66-197)||(18831438-18831570)
chr5 (66-197)||(18938799-18938930)
chr5 (62-126)||(19007552-19007616)
chr5 (883-981)||(19086067-19086167)
chr5 (61-140)||(23013754-23013831)
chr5 (482-522)||(24264932-24264972)
chr5 (482-522)||(24341563-24341603)
chr5 (272-323)||(17470527-17470578)
chr5 (756-826)||(17635546-17635617)
chr5 (109-167)||(18514196-18514255)
chr5 (482-521)||(25401798-25401837)
chr5 (860-915)||(27921259-27921314)
chr5 (6-40)||(19762209-19762243)
chr5 (598-639)||(17337385-17337426)
chr5 (603-660)||(23265580-23265637)
chr5 (80-149)||(24264488-24264557)
chr5 (80-149)||(24341118-24341187)
chr5 (61-126)||(34131395-34131460)
[»] chr2 (70 HSPs)
chr2 (61-694)||(27419784-27420424)
chr2 (61-694)||(27418638-27419278)
chr2 (131-825)||(25939405-25940117)
chr2 (61-904)||(26291258-26292137)
chr2 (61-561)||(45620950-45621467)
chr2 (62-279)||(17181117-17181335)
chr2 (405-658)||(45553583-45553837)
chr2 (120-312)||(21070695-21070887)
chr2 (61-240)||(8502177-8502356)
chr2 (61-306)||(20174999-20175240)
chr2 (795-938)||(45621681-45621825)
chr2 (61-149)||(26652364-26652452)
chr2 (61-226)||(34368593-34368752)
chr2 (61-126)||(29143942-29144007)
chr2 (148-240)||(25348878-25348969)
chr2 (61-176)||(41789767-41789882)
chr2 (71-197)||(17890930-17891057)
chr2 (796-922)||(45553300-45553426)
chr2 (482-536)||(19199632-19199686)
chr2 (436-543)||(25348568-25348677)
chr2 (61-127)||(25886893-25886959)
chr2 (133-281)||(16075535-16075684)
chr2 (61-126)||(17629410-17629475)
chr2 (61-126)||(17674702-17674767)
chr2 (61-130)||(20171630-20171699)
chr2 (591-660)||(21078202-21078271)
chr2 (61-126)||(24089917-24089982)
chr2 (61-126)||(27908167-27908232)
chr2 (62-126)||(17350393-17350457)
chr2 (77-137)||(32439374-32439434)
chr2 (65-140)||(18933141-18933216)
chr2 (404-536)||(21072158-21072292)
chr2 (61-140)||(30682898-30682977)
chr2 (64-126)||(25531544-25531606)
chr2 (404-526)||(8502523-8502647)
chr2 (61-126)||(25536890-25536955)
chr2 (61-126)||(25921866-25921931)
chr2 (61-176)||(27870574-27870685)
chr2 (61-140)||(12556832-12556911)
chr2 (405-541)||(16075830-16075968)
chr2 (66-121)||(17198903-17198958)
chr2 (483-542)||(17890570-17890629)
chr2 (482-521)||(22568196-22568235)
chr2 (61-140)||(25937915-25937993)
chr2 (204-311)||(45553934-45554041)
chr2 (864-922)||(27869869-27869927)
chr2 (63-166)||(28929637-28929743)
chr2 (61-126)||(15340285-15340350)
chr2 (61-122)||(22378529-22378590)
chr2 (61-166)||(12950145-12950252)
chr2 (105-167)||(18552536-18552599)
chr2 (590-641)||(29027970-29028021)
chr2 (482-521)||(32085937-32085976)
chr2 (404-557)||(41789984-41790137)
chr2 (482-532)||(13777008-13777058)
chr2 (106-197)||(23010827-23010921)
chr2 (61-126)||(26659804-26659870)
chr2 (61-126)||(27540900-27540965)
chr2 (80-151)||(18122063-18122135)
chr2 (107-177)||(18923001-18923068)
chr2 (486-522)||(23011225-23011261)
chr2 (860-920)||(36357271-36357331)
chr2 (61-140)||(8446214-8446293)
chr2 (483-522)||(9761906-9761945)
chr2 (61-140)||(31427101-31427180)
chr2 (602-657)||(45621472-45621527)
chr2 (595-641)||(20174218-20174264)
chr2 (495-532)||(18932842-18932879)
chr2 (482-519)||(20173284-20173321)
chr2 (482-551)||(20174747-20174816)
[»] chr4 (74 HSPs)
chr4 (61-976)||(12838853-12839764)
chr4 (61-660)||(11520177-11520780)
chr4 (482-983)||(9052782-9053294)
chr4 (105-660)||(26114994-26115551)
chr4 (90-284)||(4214627-4214821)
chr4 (61-283)||(9264042-9264265)
chr4 (61-199)||(23082905-23083044)
chr4 (71-312)||(25024228-25024470)
chr4 (756-938)||(11700333-11700517)
chr4 (62-171)||(5529257-5529367)
chr4 (768-1045)||(9737282-9737565)
chr4 (71-197)||(9850480-9850605)
chr4 (61-240)||(1832617-1832796)
chr4 (61-177)||(15049226-15049343)
chr4 (61-177)||(15105081-15105198)
chr4 (61-240)||(23975049-23975225)
chr4 (61-149)||(14572760-14572848)
chr4 (64-220)||(18448119-18448275)
chr4 (844-983)||(19900688-19900829)
chr4 (860-922)||(20315171-20315233)
chr4 (61-126)||(7583335-7583400)
chr4 (795-915)||(11520993-11521114)
chr4 (482-548)||(1833043-1833109)
chr4 (404-535)||(5529013-5529146)
chr4 (71-222)||(13588091-13588243)
chr4 (61-126)||(11252823-11252888)
chr4 (870-927)||(23080496-23080553)
chr4 (528-660)||(11700088-11700219)
chr4 (62-130)||(16730606-16730674)
chr4 (71-234)||(22527155-22527319)
chr4 (61-177)||(20316862-20316975)
chr4 (482-536)||(25120693-25120747)
chr4 (501-585)||(7612698-7612783)
chr4 (61-126)||(12577995-12578060)
chr4 (63-124)||(17217901-17217962)
chr4 (404-557)||(18448355-18448508)
chr4 (61-138)||(19547756-19547833)
chr4 (482-542)||(5956528-5956588)
chr4 (484-660)||(9264484-9264659)
chr4 (61-140)||(7613051-7613130)
chr4 (756-826)||(9264773-9264844)
chr4 (487-526)||(11780930-11780969)
chr4 (482-521)||(17672582-17672621)
chr4 (61-128)||(17710661-17710728)
chr4 (85-167)||(19093562-19093645)
chr4 (62-179)||(22217693-22217807)
chr4 (853-927)||(22526531-22526606)
chr4 (61-119)||(10105627-10105685)
chr4 (61-160)||(10782849-10782950)
chr4 (772-826)||(19882910-19882964)
chr4 (61-126)||(8968750-8968815)
chr4 (591-660)||(30600349-30600418)
chr4 (603-659)||(22526724-22526780)
chr4 (61-136)||(10087790-10087865)
chr4 (482-536)||(9850905-9850959)
chr4 (61-166)||(17672984-17673090)
chr4 (906-982)||(9264917-9264993)
chr4 (871-916)||(10589811-10589856)
chr4 (677-714)||(11520860-11520897)
chr4 (61-130)||(11781874-11781943)
chr4 (61-130)||(15165790-15165859)
chr4 (771-832)||(26115681-26115742)
chr4 (482-518)||(19636012-19636048)
chr4 (416-520)||(10782493-10782599)
chr4 (61-124)||(19604514-19604577)
chr4 (61-166)||(17107968-17108073)
chr4 (482-520)||(22173040-22173078)
chr4 (69-126)||(25095679-25095736)
chr4 (482-519)||(17276686-17276723)
chr4 (61-130)||(17336047-17336115)
chr4 (106-139)||(17661294-17661327)
chr4 (760-861)||(21323643-21323744)
chr4 (61-126)||(22171096-22171161)
chr4 (796-861)||(30600071-30600136)
[»] chr7 (119 HSPs)
chr7 (81-695)||(15611732-15612361)
chr7 (64-660)||(5530528-5531123)
chr7 (86-641)||(1882732-1883288)
chr7 (64-551)||(9500866-9501370)
chr7 (61-358)||(9863430-9863743)
chr7 (61-327)||(22468102-22468383)
chr7 (61-284)||(5221714-5221933)
chr7 (127-660)||(21232921-21233469)
chr7 (757-975)||(14754895-14755116)
chr7 (61-224)||(21502103-21502267)
chr7 (90-327)||(1874092-1874330)
chr7 (62-284)||(6040030-6040253)
chr7 (61-642)||(10649752-10650348)
chr7 (148-284)||(5482232-5482368)
chr7 (61-240)||(10938489-10938668)
chr7 (366-640)||(18495842-18496116)
chr7 (61-240)||(21884300-21884479)
chr7 (677-982)||(5530131-5530448)
chr7 (756-1022)||(16223901-16224172)
chr7 (405-546)||(11218679-11218822)
chr7 (61-240)||(21911620-21911801)
chr7 (482-659)||(31493370-31493547)
chr7 (404-660)||(13707930-13708187)
chr7 (61-149)||(5484936-5485024)
chr7 (62-189)||(6006943-6007071)
chr7 (61-223)||(141021-141182)
chr7 (416-660)||(22338810-22339055)
chr7 (61-240)||(9917386-9917566)
chr7 (61-240)||(9925298-9925478)
chr7 (869-975)||(5797627-5797735)
chr7 (482-574)||(9917052-9917144)
chr7 (482-574)||(9924964-9925056)
chr7 (181-277)||(22337615-22337711)
chr7 (860-972)||(21912345-21912460)
chr7 (64-130)||(3586218-3586284)
chr7 (61-228)||(24751922-24752084)
chr7 (61-126)||(4449995-4450060)
chr7 (773-1022)||(9864104-9864361)
chr7 (61-126)||(13263750-13263815)
chr7 (61-312)||(13708290-13708542)
chr7 (860-1022)||(18495437-18495600)
chr7 (61-125)||(23297688-23297752)
chr7 (61-140)||(9891151-9891230)
chr7 (755-889)||(16306896-16307030)
chr7 (482-659)||(18662888-18663062)
chr7 (61-124)||(39272164-39272227)
chr7 (71-222)||(9721824-9721976)
chr7 (61-126)||(8053111-8053176)
chr7 (61-126)||(8978002-8978067)
chr7 (61-130)||(9134124-9134193)
chr7 (61-134)||(10991646-10991719)
chr7 (61-161)||(18467621-18467721)
chr7 (756-832)||(21230524-21230601)
chr7 (405-640)||(140592-140822)
chr7 (482-660)||(9863791-9863973)
chr7 (61-166)||(4820181-4820288)
chr7 (80-197)||(18202231-18202348)
chr7 (61-127)||(18448932-18448998)
chr7 (61-126)||(8318182-8318247)
chr7 (84-229)||(9612611-9612751)
chr7 (84-229)||(9840182-9840322)
chr7 (61-126)||(11804057-11804122)
chr7 (61-126)||(12330392-12330457)
chr7 (66-126)||(16057919-16057979)
chr7 (66-126)||(17190214-17190274)
chr7 (756-922)||(21501436-21501604)
chr7 (347-465)||(1873485-1873605)
chr7 (61-124)||(9977689-9977752)
chr7 (105-199)||(11218324-11218419)
chr7 (61-166)||(18362708-18362815)
chr7 (417-557)||(21884550-21884692)
chr7 (482-536)||(12329941-12329995)
chr7 (590-640)||(17152724-17152774)
chr7 (860-975)||(21885021-21885139)
chr7 (61-122)||(2565479-2565540)
chr7 (61-126)||(8878334-8878399)
chr7 (61-126)||(10611059-10611124)
chr7 (61-126)||(13278494-13278559)
chr7 (61-126)||(13756140-13756205)
chr7 (61-122)||(17078098-17078159)
chr7 (404-557)||(10938167-10938322)
chr7 (61-149)||(11505469-11505557)
chr7 (482-521)||(2348389-2348428)
chr7 (794-975)||(9245298-9245479)
chr7 (590-641)||(10586600-10586651)
chr7 (482-521)||(18202671-18202710)
chr7 (71-197)||(19154181-19154308)
chr7 (63-126)||(20588199-20588262)
chr7 (71-197)||(20753580-20753707)
chr7 (61-140)||(23007938-23008012)
chr7 (590-660)||(21501718-21501787)
chr7 (272-334)||(22338663-22338725)
chr7 (61-122)||(1861957-1862018)
chr7 (80-149)||(3735609-3735677)
chr7 (81-138)||(6170227-6170284)
chr7 (484-521)||(9574992-9575029)
chr7 (61-122)||(25692115-25692176)
chr7 (61-133)||(8038374-8038446)
chr7 (796-832)||(8293841-8293877)
chr7 (845-983)||(9500553-9500692)
chr7 (661-737)||(14754787-14754863)
chr7 (853-924)||(18449705-18449777)
chr7 (417-526)||(21911871-21911982)
chr7 (482-525)||(6006590-6006633)
chr7 (854-893)||(6042652-6042691)
chr7 (872-938)||(13418677-13418744)
chr7 (683-753)||(16223815-16223885)
chr7 (860-923)||(20174751-20174814)
chr7 (864-914)||(2718345-2718395)
chr7 (482-516)||(3586551-3586585)
chr7 (482-536)||(5107220-5107274)
chr7 (108-177)||(7398086-7398156)
chr7 (482-520)||(10586397-10586435)
chr7 (602-660)||(19398463-19398521)
chr7 (71-116)||(7398639-7398684)
chr7 (598-658)||(9890737-9890798)
chr7 (80-149)||(11512380-11512449)
chr7 (879-920)||(15303493-15303534)
chr7 (61-126)||(17830625-17830690)
[»] chr8 (55 HSPs)
chr8 (64-657)||(17977062-17977645)
chr8 (61-312)||(24905335-24905587)
chr8 (366-983)||(5052276-5052915)
chr8 (61-227)||(30487075-30487241)
chr8 (403-659)||(24905081-24905338)
chr8 (628-951)||(17965184-17965522)
chr8 (65-326)||(24519692-24519957)
chr8 (795-1048)||(15238834-15239096)
chr8 (459-588)||(17965530-17965661)
chr8 (366-559)||(5855643-5855841)
chr8 (61-166)||(18447605-18447712)
chr8 (61-126)||(19265099-19265164)
chr8 (61-126)||(23868533-23868598)
chr8 (61-126)||(24722667-24722732)
chr8 (61-126)||(29381357-29381422)
chr8 (515-659)||(30121655-30121798)
chr8 (482-561)||(15064833-15064912)
chr8 (61-126)||(25233339-25233404)
chr8 (61-126)||(26887827-26887892)
chr8 (771-826)||(17976884-17976939)
chr8 (61-179)||(24381093-24381212)
chr8 (482-536)||(6885539-6885593)
chr8 (61-122)||(13313993-13314054)
chr8 (61-130)||(24583850-24583919)
chr8 (61-126)||(26139175-26139240)
chr8 (61-126)||(27660367-27660432)
chr8 (62-126)||(17997551-17997615)
chr8 (62-130)||(24109732-24109800)
chr8 (758-983)||(24904742-24904964)
chr8 (63-130)||(29766110-29766177)
chr8 (853-983)||(14075703-14075836)
chr8 (146-251)||(15061424-15061529)
chr8 (795-903)||(9642069-9642177)
chr8 (61-126)||(17100983-17101048)
chr8 (61-130)||(21315658-21315727)
chr8 (843-923)||(24119606-24119687)
chr8 (61-126)||(24520668-24520733)
chr8 (65-122)||(24851600-24851657)
chr8 (61-124)||(15059191-15059254)
chr8 (66-128)||(18569886-18569948)
chr8 (482-536)||(24645418-24645472)
chr8 (853-914)||(31288519-31288581)
chr8 (61-126)||(24389042-24389107)
chr8 (71-127)||(5856082-5856138)
chr8 (8-40)||(5856204-5856236)
chr8 (481-521)||(21315222-21315262)
chr8 (482-526)||(26394167-26394211)
chr8 (77-312)||(14076240-14076478)
chr8 (61-104)||(17510250-17510293)
chr8 (486-521)||(25181921-25181956)
chr8 (62-149)||(34498612-34498699)
chr8 (66-196)||(6885928-6886057)
chr8 (66-199)||(14271102-14271236)
chr8 (602-660)||(26614849-26614907)
chr8 (66-199)||(28275805-28275939)
[»] scaffold0672 (2 HSPs)
scaffold0672 (275-633)||(4349-4713)
scaffold0672 (756-983)||(1842-2070)
[»] scaffold0128 (2 HSPs)
scaffold0128 (482-659)||(63-240)
scaffold0128 (757-904)||(355-503)
[»] scaffold0086 (2 HSPs)
scaffold0086 (61-191)||(8669-8800)
scaffold0086 (64-176)||(13551-13660)
[»] scaffold0136 (2 HSPs)
scaffold0136 (61-541)||(14534-15022)
scaffold0136 (873-952)||(15344-15425)
[»] scaffold0238 (1 HSPs)
scaffold0238 (756-914)||(19290-19449)
[»] scaffold0006 (2 HSPs)
scaffold0006 (759-983)||(18503-18729)
scaffold0006 (759-983)||(222796-223022)
[»] scaffold0394 (1 HSPs)
scaffold0394 (63-177)||(10776-10891)
[»] scaffold0019 (4 HSPs)
scaffold0019 (404-536)||(183875-184009)
scaffold0019 (61-333)||(27275-27530)
scaffold0019 (148-256)||(183669-183777)
scaffold0019 (186-587)||(27009-27423)
[»] scaffold0005 (1 HSPs)
scaffold0005 (61-149)||(244528-244616)
[»] scaffold0056 (2 HSPs)
scaffold0056 (61-126)||(53816-53881)
scaffold0056 (61-121)||(22311-22371)
[»] scaffold1156 (1 HSPs)
scaffold1156 (61-124)||(586-649)
[»] scaffold0085 (1 HSPs)
scaffold0085 (61-140)||(23340-23419)
[»] scaffold0360 (1 HSPs)
scaffold0360 (71-312)||(17205-17447)
[»] scaffold0054 (1 HSPs)
scaffold0054 (61-129)||(72993-73061)
[»] scaffold0034 (1 HSPs)
scaffold0034 (69-126)||(81056-81113)
[»] scaffold0024 (2 HSPs)
scaffold0024 (80-167)||(40573-40661)
scaffold0024 (482-520)||(40205-40243)
[»] scaffold0032 (1 HSPs)
scaffold0032 (61-126)||(102387-102452)
[»] scaffold0016 (1 HSPs)
scaffold0016 (65-121)||(4167-4223)
[»] scaffold0653 (1 HSPs)
scaffold0653 (794-975)||(4284-4465)
[»] scaffold0263 (1 HSPs)
scaffold0263 (61-118)||(16596-16653)
[»] scaffold0622 (1 HSPs)
scaffold0622 (482-526)||(1120-1164)
[»] scaffold0451 (1 HSPs)
scaffold0451 (61-116)||(5065-5120)


Alignment Details
Target: chr6 (Bit Score: 746; Significance: 0; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 746; E-Value: 0
Query Start/End: Original strand, 8 - 1048
Target Start/End: Complemental strand, 9727111 - 9726057
Alignment:
Q  8 gttcaagaggaaggcaagcactagaagcttcaatgatatgttgtannnnnnnn-gtaatttgtttttagctaccatgagtaactaaatctttttagctta 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||    
T  9727111 gttcaagaggaaggcaagcactagaagcttcaatggtatgttgtatttttttttgtaatttgtttttagctaccatgagtaactaaatctttttaactta 9727012  T
Q  107 gggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9727011 gggttctaagatgaacctctattttgtttgttgggtaattatttaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaacg 9726912  T
Q  206 cgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatgtctaaccaggaagtaatt 305  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  9726911 cataagatttgtctcctctgaagcataaccttgatttaggcacttatgtagtgacagaccctaatattgatatttatatctctctaaccaggaagtaatt 9726812  T
Q  306 aattagtcattagcgaaacaaattgaaagcgagctatcctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaatatag 405  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||| |||||||| ||||  ||||||||||||||||||||||||||||||| |||| |||    
T  9726811 aattactcattagcgaaacaaattgaaagtgagctaccctgataataagtacttagggaggtgacatatctaatattgatgaatatctattgaaatgtag 9726712  T
Q  406 taactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacctataaggtagacgctgatagggctgc 505  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9726711 taactagctagtaattaaggaaacatgtgacttcacgacttaactcagaccacgaactccattcttctttcacctataaggtagacgctgatagggctgc 9726612  T
Q  506 ccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaat 605  Q
    ||||||||||||||| |||||| |||||||| ||||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  9726611 ccgtttgtagaactatcgagaacgagagtgtgttatgtatttctaagattcatagacgatggaacctttaggaacactgggaagtcatacctttggaaat 9726512  T
Q  606 ttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaactcaataggcggag 705  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9726511 ttaggaactctaatttaagtttatgtttcaattacccctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaactcgataggcggag 9726412  T
Q  706 ggatagacctaatctataagagagtaagacccccgcatgtaaggatcattgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcact 805  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  9726411 ggatagacctaatctataagagagtaagacccccgcatgtaaggatcactgtgcaacttgacagctgattaggttatcacgtcacaacgaactcatcact 9726312  T
Q  806 tagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattc 904  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  9726311 tagatagtctacttagaataattgaacttgaattttctgttaattaattccaacaaataaatagagggaattcaaagaatcctaaccgccactaacattc 9726212  T
Q  905 cgcaatcaaaataggtaaacttt-ctctgttgcaa-cagattaactttgcaaa-ctttaaacccttatctcttta--tttatttg--tcccaaata-gca 996  Q
     |||||||||| ||||||||||| |||| || ||| || |||||||||||||| ||||||||||||||||||||   |||||||   ||||||||| | |    
T  9726211 tgcaatcaaaacaggtaaacttttctcttttccaaacatattaactttgcaaaactttaaacccttatctcttttattttattttgttcccaaataagta 9726112  T
Q  997 acgcaaattgtttggacgaaacgaca--tcatgt-gatacgatactctacttatc 1048  Q
    ||||||||||||||||||||||||||   ||||| ||||||||||||||||||||    
T  9726111 acgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatc 9726057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 61 - 660
Target Start/End: Complemental strand, 24216590 - 24215985
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatcttttta-gcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaag 158  Q
    |||||||||||||| |||||||| |||||| |||||||||| | ||||| ||||||||||||||||| |||| |||| ||  |||||||| |||||| ||    
T  24216590 gtaatttgtttttaactaccatgggtaactgaatctttttaaggttaggattctaagatgaacctctgttttatttggtgcataattatttaatttatag 24216491  T
Q  159 tcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtg 258  Q
    |||||| || ||||||||| | |||||||||||||||||||||| || ||||||||||||||||||| |||  |||| |  ||||| || ||| ||||||    
T  24216490 tcttttcttaagttattttttgttcgctatttagttttactgtagtgtgtaagatttgtctcctctggagcgcaaccctagtttaggcatttaggtagtg 24216391  T
Q  259 acagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcg-aaacaaattgaaagcgag-ctatcctgatagtaagta 356  Q
    | ||  |||||||||||||||||||| |||||| | |||||||||||||||| | | ||||| ||| |||  |||||||||   | | || |||||||||    
T  24216390 ataggacctaatattgatatttatatttgtctatctaggaagtaattaattaataactagcgaaaagaaaccgaaagcgagtagaccttggtagtaagta 24216291  T
Q  357 ctcaggggtgtgacatatctaatattgatgaatatctatttaa---atatagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaa 453  Q
    || ||| | |||||||| ||||||||||  || ||||  | ||   |    |||||||||| ||||||||||||||| ||| | ||||||||||| ||      
T  24216290 ctgaggag-gtgacataactaatattgagtaaaatctgctgaaagcaggaggtaactagttagtaattaaggaaacaagtgacatcacgacttaaatccg 24216192  T
Q  454 cccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaa 551  Q
    || | |||||||||||  ||| |||||   || |||||||| ||| |||||| |   |||||||||||||||||| |||||| ||  | |||||||||||    
T  24216191 cctagtaactccattcaccttgcaccttggtatggtagacgttgacagggcttcttatttgtagaactaccgagagggagagagtgatgtgtacttctaa 24216092  T
Q  552 aattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgag 651  Q
     |||||||||      |||||||||||||||  ||   | |||||||||||||||||||||| | || || | ||||||||||||| |||||||||  ||    
T  24216091 gattcatagatgtgaaaacctttaggaacat--ggccattatacctttggaaatttaggaacaccaactttaatttatgtttcaatcacccctaagtaag 24215994  T
Q  652 taagacccc 660  Q
    |||| ||||    
T  24215993 taagtcccc 24215985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 188 - 660
Target Start/End: Complemental strand, 14726352 - 14725863
Alignment:
Q  188 tttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaata--------------tt 273  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||| |||||| ||||||||||  |||||||              ||    
T  14726352 tttagttttactgtagtgcgtaagatttttctcctctgaagcataaccctgatataggcacttaggtagtgacaggacctaatactgatgtttatatctt 14726253  T
Q  274 gatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag-ctatcctgatagtaagtactcaggggtgtgacat 372  Q
    ||||||||||||||| ||| ||||||||||||| ||||| | |||||||  |||   ||||||||  || | |||||||||||||| |||   |||||||    
T  14726252 gatatttatatatgtgtaatcaggaagtaattagttagtaactagcgaa--aaaacaaaagcgagtgtaccttgatagtaagtacttaggcaggtgacat 14726155  T
Q  373 atctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattc 469  Q
    | |||||||||||||| ||||  | ||||    |||||| ||||| ||||||||||||||| ||| ||||||||  ||| ||| |||| |||||||||||    
T  14726154 acctaatattgatgaacatctgctgaaatcaggtagtaagtagttagtaattaaggaaacaagtgacttcacgaaataaatcatcccattaactccattc 14726055  T
Q  470 ttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatgg 567  Q
    | ||   ||||   ||||||| | | ||||| |||||| ||||||||||| |||||||| | ||| ||| |||||||||||||||||  |||||  |  |    
T  14726054 tcctcgaaccttggtaaggtaaatgttgataaggctgctcgtttgtagaattaccgagaggaagaatgtgttatgtacttctaaaatctatagatgagag 14725955  T
Q  568 aacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    |||||| || |||| |||  |  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || | ||||||||||    
T  14725954 aaccttcagaaacactggtca-ccatacctttggaaatctaggaactctaatttaagtttatgtttcaattacccctgagggtgtaagacccc 14725863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 61 - 240
Target Start/End: Complemental strand, 14726552 - 14726372
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| ||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  14726552 gtaatttgtttttagttaccatgagtaactaaatccttttaggctagtgttctaagatgaacctctattttatttgttggataattatttaatttaaagt 14726453  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    | |||||| | ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||    
T  14726452 cgtttattgatttattttctgttcactatttagttttactgtagtgcgtaagatttgtctcctctggagcaaaaccctgat 14726372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 61 - 284
Target Start/End: Complemental strand, 2587710 - 2587487
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||  |||||||  |||||| |||||| || ||    
T  2587710 gtaatttgtttttagttaccatgggtaactaaatctgtttaggctagggttctaagatgaacctctatttcatttgttgaataattatttaattcaatgt 2587611  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||||| ||||||| | || ||||||||||||||||||| || |||| |||| |||| |||| ||||||||| |  ||||| || ||| |||||||    
T  2587610 catttattcaattattttttgtt-gctatttagttttactgtagtgtgtaaaatttatctcatctggagcataaccctagtttaggcatttaggtagtga 2587512  T
Q  260 cagatcctaatattgatatttatat 284  Q
    |||| |||||||||||| |||||||    
T  2587511 cagagcctaatattgatgtttatat 2587487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 9291227 - 9291370
Alignment:
Q  114 aagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaaga 212  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||| ||||||| | |||| ||||||||||||||||| ||||||| |    
T  9291227 aagatgaacctctattctgtttgttggataattatttaatttaaagtcgtttattcaattattttatgttcgttatttagttttactgtattgcgtaaaa 9291326  T
Q  213 tttgtctcctctgaagcataaccttgatttagacacttatgtag 256  Q
    |||||||||  |||||||||||| |||||||| |||||| ||||    
T  9291327 tttgtctccattgaagcataaccctgatttaggcacttaggtag 9291370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 119 - 339
Target Start/End: Original strand, 19722501 - 19722735
Alignment:
Q  119 gaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgt 217  Q
    ||||||| |||||||||||||| ||||| || |||||||||| ||||||| ||||||||| | |||| | ||||||||||||||| |||||| |||||||    
T  19722501 gaacctcaattttgtttgttggataatttttgaatttaaagtattttattaagttattttatgttcgttttttagttttactgtagtgcgtatgatttgt 19722600  T
Q  218 ctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatg-------------tctaaccaggaagtaat 304  Q
    ||||||| || ||||||| |||||||| |||||| |||||||||   |||||| |||||||| |||| ||             |||||||||||||||||    
T  19722601 ctcctcttaaccataaccgtgatttaggcacttaggtagtgacatgacctaattttgatattcatatctgataattttatctgtctaaccaggaagtaat 19722700  T
Q  305 taattagtcattagcgaaacaaattgaaagcgagc 339  Q
    |||||| | | ||||||||||||  ||||||||||    
T  19722701 taattattaactagcgaaacaaaacgaaagcgagc 19722735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 116 - 261
Target Start/End: Original strand, 23644882 - 23645027
Alignment:
Q  116 gatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatt 214  Q
    |||||||||||||||| |||||||| || ||||| |||||||||||||| ||||| ||||||| | |||| |||||| ||||||||| ||||||||||||    
T  23644882 gatgaacctctattttatttgttggatatttatttaatttaaagtcttt-attcaattattttatgttcgttatttaattttactgttatgcgtaagatt 23644980  T
Q  215 tgtctcctctgaagcataaccttgatttagacacttatgtagtgaca 261  Q
    |||||| |||||||||||||| |  ||||| |||||| |||||||||    
T  23644981 tgtctcatctgaagcataaccctagtttaggcacttaagtagtgaca 23645027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 3357563 - 3357389
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| ||| ||| ||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| | |||||   |||||||||||    
T  3357563 gtaatttgtctttagttac-atgtgtaactaaatctttttaggctaggtttctaagatgaacctctattttggttgtttgataatttatttaatttaaag 3357465  T
Q  159 tcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataacc 235  Q
    || |||||||| |||||||   |  |||||||| ||||||| |  || ||||||| |||||||||||||||||||||    
T  3357464 tc-tttattcacttattttgattatgctatttaattttactattgtgggtaagatctgtctcctctgaagcataacc 3357389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 107 - 310
Target Start/End: Original strand, 22565256 - 22565459
Alignment:
Q  107 gggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatg 205  Q
    |||||| ||||||||||| |||||| |||||||| || ||||| |||||| ||||||| ||| ||||||||  | |||| |||||||||||||||| |||    
T  22565256 gggttcaaagatgaacctttattttatttgttggatatttatttaatttatagtcttt-atttagttatttgatgttcgttatttagttttactgttatg 22565354  T
Q  206 cgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatgtctaaccaggaagtaatt 305  Q
    | ||| ||||||||| |||| ||| ||| | |  ||||| |||||| |||||||||   |||||||||||||||||||| |||| | |  |||| |||||    
T  22565355 cataatatttgtctcatctggagcgtaaacctagtttaggcacttaggtagtgacatggcctaatattgatatttatatttgtccatcttggaaataatt 22565454  T
Q  306 aatta 310  Q
    |||||    
T  22565455 aatta 22565459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 10504582 - 10504410
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||| | ||||| | ||||| ||||||||||||||||||  ||| ||| ||||||||||||||||| |||||||||| || ||   |||||||||||    
T  10504582 gtaatttatctttagttgccatgtgtaactaaatctttttaggctagcgttataagatgaacctctattctgtttgttggatattttatttaatttaaag 10504483  T
Q  159 tcttttattcagtt-attttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcata 232  Q
    || |||||||||||  ||||||| || | ||||| ||||||| |  |||||||||||||||||||||||||||||    
T  10504482 tc-tttattcagttgtttttctaatc-caatttaattttactatcgtgcgtaagatttgtctcctctgaagcata 10504410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 13137164 - 13137319
Alignment:
Q  70 ttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatta-atttaaagtcttttattc 168  Q
    |||||| || |||| |||||||||| |||||||  || ||||||| ||||| |||| || || |||||| | ||||||||  |||||||||| ||||||     
T  13137164 ttttagttatcatgggtaactaaatatttttagaataaggttctatgatgagcctcaatattatttgttcgataattattttatttaaagtcgtttattt 13137263  T
Q  169 agttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctct 224  Q
    |||||||||||||| ||||||||||||||||||| || ||||  ||||||||||||    
T  13137264 agttattttctatttgctatttagttttactgtagtgtgtaaactttgtctcctct 13137319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 405 - 660
Target Start/End: Complemental strand, 2587413 - 2587157
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    |||||||||| ||||||||||||||| ||| ||||| ||||||| ||| || | ||||  |||||| ||  |||||   ||||||||||||||||||||     
T  2587413 gtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcagcctagtaacgtcattctcctcgcaccttggtaaggtagacgctgatagggt 2587314  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttgga 602  Q
    || | ||||| |||||||| |||| |||||||||  |||||||| |||| |||||||||  |   ||| |||||||||| ||   |  ||||||||  ||    
T  2587313 tgtctgtttggagaactactgagagggagagtgtgctatgtactcctaagattcatagatgaaaaaacatttaggaacactgacca-ccataccttatga 2587215  T
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||| | || |||| |||||||||||||||||  | || ||||||||||||    
T  2587214 aatttaggaacgccaacttaagtttatgtttcaattaccattgagggagtaagacccc 2587157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 404 - 536
Target Start/End: Original strand, 9291466 - 9291600
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||| |||||||||| | ||  |||||   ||||  ||||||||||||||    
T  9291466 agtaactagttggtaattaaggaaacaagtgacttcatgacttaaatcagcccaataactccattttcctcacaccttagtaagaaagacgctgataggg 9291565  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||| |||| || ||||||||||| |||||||||    
T  9291566 ctgcctgtttatataactaccgagagggagagtgt 9291600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 9387058 - 9386979
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||| ||| ||||| ||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  9387058 gtaatatgtctttagttacaatgagtaactaaacttttttaggttagggttctaagatgaacctctattttgtttgttgg 9386979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 24469147 - 24469079
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    |||||||||||||| ||||||| || ||||||||||||||| |||| ||||||||||||||||||||||    
T  24469147 taatttgtttttagttaccatgtgtgactaaatctttttagattagagttctaagatgaacctctattt 24469079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 34479525 - 34479410
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||||| |||||||||||| |||| ||||||||  | ||||||||||||||| |||||||||||||||||| | ||| ||||| |||  |     
T  34479525 gtaatttgtctttagttaccatgagtaaataaacctttttagggttgggttctaagatgaatctctattttgtttgttggattatt-ttaatataagttt 34479427  T
Q  161 ttttattcagttatttt 177  Q
    ||||||||| |||||||    
T  34479426 ttttattcatttatttt 34479410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 32759441 - 32759324
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| |||| || |||| |||||||||||||  ||||||||||||||||||||||||| | |||||||| || ||   |||||||||||    
T  32759441 gtaatttgtctttagttaccgtgtgtaagtaaatctttttaggatagggttctaagatgaacctctattctatttgttggatattttatttaatttaaag 32759342  T
Q  159 tcttttattcagttatttt 177  Q
    || |||||| |||||||||    
T  32759341 tc-tttatttagttatttt 32759324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 927
Target Start/End: Original strand, 23088193 - 23088267
Alignment:
Q  853 ttccaacaataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt 927  Q
    ||||||||||||||||||||||||  |||||||||||| ||| |||||||||  ||||||||| |||||||||||    
T  23088193 ttccaacaataaatataggggatttgaagaatcctaactgccgctaacattctacaatcaaaacaggtaaacttt 23088267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 22409282 - 22409351
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  22409282 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttataagatgaacctctattt 22409351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 22849963 - 22850017
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  22849963 taaggtagacactgataggactgcccgtttgtagaactaccgagagggagagtgt 22850017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 14638663 - 14638594
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||| || |||||| ||||||| |||||||||| ||||||||||||  |||||||||||||||||||||    
T  14638663 gtaatatggttttagttaccatgtgtaactaaatatttttagcttagaattctaagatgaacctctattt 14638594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 14723038 - 14722973
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||| | ||||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  14723038 gtaatttgttttttgttaccatgtgtaactaaatttttttaggttagagttctaagatgaacctct 14722973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19578245 - 19578308
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||  || ||||||||||||    
T  19578245 gtaatttgtttttagttaccatgtgtaactaaatccttttagcttagaattataagatgaacct 19578308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 20144098 - 20144157
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||| ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||    
T  20144098 tttagttaccatgtgtaactaattctttttagctgagagttctaagatgaacctctattt 20144157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 22188741 - 22188682
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||| ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||    
T  22188741 tttagttaccatgtgtaactaattctttttagctgagagttctaagatgaacctctattt 22188682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 27123548 - 27123611
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||| ||| |||||||||||||||||| || | ||||||||||||||||    
T  27123548 gtaatttgtttttagttactatgtgtaactaaatctttttaggttggagttctaagatgaacct 27123611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 15613309 - 15613379
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt 131  Q
    ||||||||| ||||| || ||||||| |||||||||||||||  | |||||||| ||||||||||||||||    
T  15613309 gtaatttgtctttagttatcatgagttactaaatctttttaggatggggttctatgatgaacctctatttt 15613379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 1636065 - 1635996
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| |||| || ||||||||||| |||| | |||| |||||| |||||||||||||||    
T  1636065 gtaatttgtttttagttaccgtgtgtaactaaatcctttttggttagagttctacgatgaacctctattt 1635996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 17822751 - 17822819
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| ||| | | |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  17822751 gtaatttgtttttagttacta-gtgtaactaaatatttttaggttagagttctaagatgaacctctattt 17822819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 19594686 - 19594751
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||||||||||| |||||| ||||  || ||||||||||||||    
T  19594686 gtaatttgtttttagttaccatgtgtaactaaatccttttaggttagaattataagatgaacctct 19594751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 21153173 - 21153238
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||  ||||||| |||||||||| ||||||| |||| ||||||| ||||||||||    
T  21153173 gtaatttgtttttatttaccatgtgtaactaaatatttttaggttagagttctaatatgaacctct 21153238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 21846420 - 21846477
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatg 119  Q
    |||||||||||||| ||||||| |||||||||| ||||||| |||| |||||||||||    
T  21846420 taatttgtttttagttaccatgtgtaactaaatatttttaggttagagttctaagatg 21846477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 860 - 904
Target Start/End: Original strand, 9291850 - 9291894
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattc 904  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  9291850 aataaatagaggggattcaaagaatcctaaccgccgctaacattc 9291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 14882344 - 14882233
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtctt 162  Q
    ||||||| ||||| |||||| ||||||||||||||||| |  ||| ||||||  ||| |||| ||||||||||||||| ||  | |||||||||||| ||    
T  14882344 aatttgtctttagttaccatcagtaactaaatctttttgggatagagttctacaatg-acctttattttgtttgttggata--ttttaatttaaagt-tt 14882249  T
Q  163 ttattcagttattttc 178  Q
    ||||||| ||||||||    
T  14882248 ttattcatttattttc 14882233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 482 - 518
Target Start/End: Complemental strand, 15467003 - 15466967
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaac 518  Q
    |||||||||||||||||||||||||||||||||||||    
T  15467003 taaggtagacgctgatagggctgcccgtttgtagaac 15466967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 685 - 820
Target Start/End: Complemental strand, 24215897 - 24215750
Alignment:
Q  685 ggtgcaactcaataggcggagggatagacctaatctataagagagtaagacccccgcatgtaaggatcat-------------tgtgcaacttgacagct 771  Q
    |||| ||||| ||||||| ||||||| ||| ||||||| ||||||||||| || ||||||||||||||||             |||||||||| |||| |    
T  24215897 ggtgaaactcgataggcgaagggatataccaaatctatgagagagtaaga-cctcgcatgtaaggatcatcgtgcgacgatcatgtgcaacttaacagtt 24215799  T
Q  772 gattaggttatcccgtcacaacaaactcatcacttagatagtctactta 820  Q
    ||||| |||||| |||| |||| ||||||||||||| |||||| |||||    
T  24215798 gattaagttatcacgtcccaacgaactcatcacttaaatagtccactta 24215750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 757 - 828
Target Start/End: Original strand, 24251998 - 24252070
Alignment:
Q  757 tgcaacttgac-agctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataatt 828  Q
    ||||||||||| | |||||||| |||   |||| ||||| |||||||||||||||||||||||||||||||||    
T  24251998 tgcaacttgacgaactgattagattagaacgtcccaacagactcatcacttagatagtctacttagaataatt 24252070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 482 - 562
Target Start/End: Original strand, 26214894 - 26214973
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagac 562  Q
    |||||||||||  ||||||| || ||||||||| ||||||||||| ||||| | | | |||||||||||||||||||||||    
T  26214894 taaggtagacga-gatagggttgtccgtttgtataactaccgagagggagactatttgatgtacttctaaaattcatagac 26214973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 935
Target Start/End: Original strand, 28585888 - 28585972
Alignment:
Q  853 ttccaacaat-aaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaac-tttctctgttg 935  Q
    |||||||||| ||||| ||||||||  |||||||||||||||| |||||||||  ||||||||| || ||||| |||||||||||    
T  28585888 ttccaacaattaaatagaggggatttgaagaatcctaaccgccgctaacattctacaatcaaaacagataaacttttctctgttg 28585972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 8066073 - 8065966
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||| |  |||| |||||||| ||||||||| |||| ||| ||||||||||| |||||| | |||||||| || ||| ||||||||| |    
T  8066073 gtaatttgtttttagttgtcatgtgtaactaattctttttaggttagagttataagatgaaccactatttatttttgttggatatttatttaatttaatg 8065974  T
Q  159 tcttttat 166  Q
    || |||||    
T  8065973 tcgtttat 8065966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 23087769 - 23087844
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattca 557  Q
    ||||||||||||||||| |||| ||||||| || || |||||||| ||||||||| |||||  ||||||| |||||    
T  23087769 taaggtagacgctgataaggctacccgtttataaaaataccgagagggagagtgtgttatgcgcttctaagattca 23087844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 482 - 561
Target Start/End: Original strand, 23645233 - 23645312
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcataga 561  Q
    ||||||||||||||||  | ||||| ||||||||||||||  |||  |||||||| |||||||||| ||| |||||||||    
T  23645233 taaggtagacgctgattagactgcctgtttgtagaactactaagagagagagtgtgttatgtacttataagattcataga 23645312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 578
Target Start/End: Complemental strand, 10504247 - 10504150
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtatt-atgtacttctaaaattc-atagacaatggaacctttagga 578  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||| ||||||||| || ||||  |||||| |||| |||||| |||| ||||||||||    
T  10504247 taaggtagacga-gatagggttgcccctttgtagaactaccgagagggagagtgtgttgatgtctttctaagattcaatagacgatggtacctttagga 10504150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 22412047 - 22412109
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    |||||||||||| | ||||||  |||||||||||||||||| | || ||||||||||||||||    
T  22412047 taatttgtttttggttaccatatgtaactaaatctttttaggtcagagttctaagatgaacct 22412109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 591 - 660
Target Start/End: Original strand, 9276845 - 9276914
Alignment:
Q  591 catacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    |||||||||||||| | ||||| |||||||||| ||||  |||||||||||| | || ||||||||||||    
T  9276845 catacctttggaaaatcaggaaatctaatttaagtttaaatttcaattacccttgagggagtaagacccc 9276914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 9898658 - 9898730
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttatttt 177  Q
    ||||||||||||||||||||||||||  |||||| || ||||| ||||||||| ||| |||||| |||||||||    
T  9898658 tagggttctaagatgaacctctatttgttttgtt-ggcaattatttaatttaatgtcgtttatttagttatttt 9898730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 14075833 - 14075744
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaattatt 149  Q
    |||||||||||| |  ||||||| |||| ||||||||||||| |||| ||||||| || ||||||| ||| | |||||||| ||||||||    
T  14075833 gtaatttgttttcaattaccatgtgtaaataaatctttttaggttagagttctaaaataaacctctgtttatctttgttggataattatt 14075744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 860 - 904
Target Start/End: Original strand, 9277133 - 9277177
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattc 904  Q
    |||||||| |||||||||||||||||||||||||| | |||||||    
T  9277133 aataaatagaggggattcaaagaatcctaaccgccgcgaacattc 9277177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 860 - 916
Target Start/End: Original strand, 31626132 - 31626188
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaat 916  Q
    |||||||| ||| |||| ||| |||||||||| |||||||||||| |||||||||||    
T  31626132 aataaatagaggagattaaaaaaatcctaaccaccactaacattctgcaatcaaaat 31626188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 920
Target Start/End: Original strand, 33655743 - 33655799
Alignment:
Q  864 aatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggt 920  Q
    |||| ||||||||| ||||||||||||  |||||||||||| |||||||||| ||||    
T  33655743 aatagaggggattcgaagaatcctaactaccactaacattctgcaatcaaaacaggt 33655799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 8038699 - 8038814
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtc 160  Q
    |||||||| || || ||||| | |||||||||||||||||| |||  |||||||||||| | | |||||  |||||| | |||||| ||||||||| |||    
T  8038699 taatttgtcttcagttaccacgtgtaactaaatctttttagattattgttctaagatgagcttatatttattttgttagataattatttaatttaatgtc 8038798  T
Q  161 ttttattcagttattt 176  Q
     |||||| | ||||||    
T  8038799 gtttatttatttattt 8038814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 845 - 915
Target Start/End: Complemental strand, 9386314 - 9386243
Alignment:
Q  845 ttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaa 915  Q
    ||||||| ||||||||| |  ||| |||| |||| |||||||||||||||| ||||||||| ||||||||||    
T  9386314 ttaattaattccaacaaatggatagagggaattcgaagaatcctaaccgccgctaacattctgcaatcaaaa 9386243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24479393 - 24479330
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||| || ||||||| ||  |||||||| ||||| |||| ||||||||||||||||||    
T  24479393 aatttgttttaagttaccatgtgtggctaaatctatttaggttagagttctaagatgaacctct 24479330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 11004799 - 11004833
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttg 139  Q
    ||||||||||||||||||||||||||| |||||||    
T  11004799 tagggttctaagatgaacctctattttatttgttg 11004833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 18074364 - 18074430
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgttt 135  Q
    ||||||| ||||||  |||||||||| ||||||| ||||| ||||||||||||| | ||||| ||||    
T  18074364 tttttagttaccatatgtaactaaatatttttaggttaggcttctaagatgaacttttatttagttt 18074430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 19245212 - 19245174
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaacta 520  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  19245212 taaggtagacgctgatagagcttcccgtttgtagaacta 19245174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 23008418 - 23008464
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||| |||||||||||||||||  |||| ||||||||||||||||||    
T  23008418 catgtgtaactaaatctttttatgttagagttctaagatgaacctct 23008464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 23779946 - 23779900
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||| |||||||||||||||||  |||| ||||||||||||||||||    
T  23779946 catgtgtaactaaatctttttatgttagagttctaagatgaacctct 23779900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 14078476 - 14078545
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||  |||||||  ||||||| ||||| ||  |||| ||| ||||||||||||||||||    
T  14078476 gtaatttgtttttacttaccatgtttaactaattctttataagttagagttttaagatgaacctctattt 14078545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 21687892 - 21687961
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||| ||||||| || ||| |||  ||||||||||||||||||||||||||  |||||||| || |||||    
T  21687892 catgtgtaactagatatttataggctagggttctaagatgaacctctatttgatttgttggatagttatt 21687961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 23231653 - 23231698
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||| |||| |||| |||||| |||||||||||||||    
T  23231653 gtaactaaatcttcttaggttagagttctatgatgaacctctattt 23231698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 860 - 967
Target Start/End: Original strand, 24188097 - 24188206
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgcaaact 957  Q
    |||||||| |||||||||||| |||||||||   | ||||||||   ||||||||| || |||||||| ||||||||| |||||||||| ||   |||||    
T  24188097 aataaatagaggggattcaaaaaatcctaactatcgctaacatttttcaatcaaaacagataaactttgctctgttgcaaacagattaaattgcaaaact 24188196  T
Q  958 ttaaaccctt 967  Q
     |||||||||    
T  24188197 ataaaccctt 24188206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 920
Target Start/End: Original strand, 26215264 - 26215305
Alignment:
Q  879 aagaatcctaaccgccactaacattccgcaatcaaaataggt 920  Q
    ||||||| ||||||||||||||||||  ||||||||||||||    
T  26215264 aagaatcttaaccgccactaacattctacaatcaaaataggt 26215305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 61 - 694
Target Start/End: Complemental strand, 17443279 - 17442640
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| |||||  |||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  17443279 gtaatttgtctttagtcaccatgggtaactaaatctttttaggccagggttctaagatgaacctctattttgtttgttggataattatttaatttaaagt 17443180  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||    
T  17443179 cttttattcagttattttttattcgctatttagttttactatagtgcgtaagatttgtctcctttgaagcataaccctgatttaaacacttaggtagtga 17443080  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtact 358  Q
    ||    ||||||||||||||||||||||||||||| |||||| ||||| |||| | |||| ||||||  ||||||||||| || ||||||||||||||||    
T  17443079 ca-tggctaatattgatatttatatatgtctaacctggaagttattaactagtaactagcaaaacaatctgaaagcgagcgtaccctgatagtaagtact 17442981  T
Q  359 caggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacc 455  Q
     || | ||||||||| |||||||||| ||| ||||  | ||||   ||||||||||||| ||||||||| ||||| ||| ||||| ||||||| | | ||    
T  17442980 tagagatgtgacatacctaatattgacgaacatctgctgaaatcagatagtaactagttagtaattaagaaaacaggtgacttcaggacttaaataagcc 17442881  T
Q  456 cactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaa 553  Q
    || |||||   || |||||| ||||   |||||||||||||||||||| | |||||||||||||||||||||| || ||||||  ||||||||||||| |    
T  17442880 cagtaactttgtttttcttttaccttggtaaggtagacgctgatagggtttcccgtttgtagaactaccgagagggcgagtgtgctatgtacttctaaga 17442781  T
Q  554 ttcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagta 653  Q
    ||||||||  | |||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||| | |||||||  |||||| || ||||||||    
T  17442780 ttcatagatgaaggaacctttaggaatattgggaagtcatacctttgaaaatttaagtactctaatttaagtatatgttttgattaccactgagcgagta 17442681  T
Q  654 agacccctacgaaccgtcatgtggatcagcaggtgcaactc 694  Q
    ||||||| | ||| |||||  ||||||||||||||||||||    
T  17442680 agacccccatgaatcgtcacatggatcagcaggtgcaactc 17442640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 68 - 284
Target Start/End: Original strand, 16786781 - 16786998
Alignment:
Q  68 gtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttat 166  Q
    |||||||| |||||||||||||||||| | |||||| |||||||||| ||||||||| |||||| |||||| | |||||||| ||||||| ||| |||||    
T  16786781 gtttttagttaccatgagtaactaaatatatttagcctagggttctacgatgaacctttattttatttgttagataattatttaatttaatgtcatttat 16786880  T
Q  167 tcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcc 266  Q
    ||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||| |||  |||| |  ||||  |||||| |||||||||   ||    
T  16786881 tcaattattttttgttcgctatttagttttactgtagtgcgtaagatttgtctcctctggagcgcaaccatagtttatgcacttaggtagtgacatggcc 16786980  T
Q  267 taatattgatatttatat 284  Q
    ||||||||||| ||||||    
T  16786981 taatattgatagttatat 16786998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 405 - 660
Target Start/End: Complemental strand, 34481649 - 34481393
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    |||||||||| ||||||||||||||| ||| ||||| ||||||| |||||||| ||||| |||||| ||  ||| |   |||||||| || |||||||||    
T  34481649 gtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcaacccaataactgcattctcctcgcacattcgtaaggtaggcgttgatagggc 34481550  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttgga 602  Q
    | || ||||||||||||||||||| |||   |||  |||||||| |||| ||||||| |      ||||||||||||||||||| | |||||||||||||    
T  34481549 tacctgtttgtagaactaccgagagggatgatgtgctatgtactcctaagattcatatatgggaaaacctttaggaacattgggca-tcatacctttgga 34481451  T
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||| | || |||| |||||||||||||||||| | || ||||||||||||    
T  34481450 aatttaggaacgccaacttaagtttatgtttcaattacccgtgagagagtaagacccc 34481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 755 - 938
Target Start/End: Original strand, 24267542 - 24267726
Alignment:
Q  755 tgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattattt 854  Q
    |||||||||||||||| |||||||||||| |||| | |||||| ||||||||| |||||||||||||||||| ||| |  || ||   | ||||||| ||    
T  24267542 tgtgcaacttgacagcagattaggttatcacgtctcgacaaacacatcacttatatagtctacttagaataa-tgagcgcgacttgattattaattaatt 24267640  T
Q  855 ccaac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgcaa 938  Q
    ||||| ||| |||| |||||||||||||||||||||||| | ||||||||| |||||||||| | ||||| ||| |||||||||||    
T  24267641 ccaacaaattaatagaggggattcaaagaatcctaaccgtcgctaacattctgcaatcaaaacaagtaaattttgctctgttgcaa 24267726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 153 - 467
Target Start/End: Complemental strand, 17838216 - 17837884
Alignment:
Q  153 ttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttat 252  Q
    |||| |||||||||||||||||||| | |||  |||||| ||||| |||| |||||||||||||||||||||||||||||||  ||||||||    |||     
T  17838216 ttaaggtcttttattcagttattttttgttcattatttatttttattgtagtgcgtaagatttgtctcctctgaagcataacactgatttaggattttaa 17838117  T
Q  253 gtagtgacagatcctaata--------------ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag 338  Q
    |||||||||||  ||||||              ||||||||||||  | |||||||  |||||||||| ||| | | | ||||||||||  |||||||||    
T  17838116 gtagtgacagagtctaatatttatattcatatcttgatatttataattatctaaccgagaagtaattagttaataacttgcgaaacaaaccgaaagcgag 17838017  T
Q  339 c-tatcctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtg 434  Q
    | || |||||||||||||||| || |   ||||||| | |||||||||||| || |  | ||||    |||||||||||| ||||||||||||||| |||    
T  17838016 cgtaccctgatagtaagtacttagagagatgacataccgaatattgatgaacatatgctgaaattaggtagtaactagttagtaattaaggaaacaagtg 17837917  T
Q  435 ccttcacgacttaactcaacccactaactccat 467  Q
     ||||||||||||| ||| |||| |||||||||    
T  17837916 acttcacgacttaaatcatcccagtaactccat 17837884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 482 - 660
Target Start/End: Complemental strand, 15299631 - 15299454
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    ||||||||||| |||||||| || | ||||||||||||||||||  |||| |||| || ||||||||||| | |||||||  |  |||||||||| ||||    
T  15299631 taaggtagacgatgatagggttgtctgtttgtagaactaccgagtgggagggtgtgttgtgtacttctaagactcatagatgagagaacctttagaaaca 15299532  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
     | |  |  ||||||||||||||||||||||||||||||||| |||||||| |||||| || | || ||||||||||||    
T  15299531 ctagctaa-catacctttggaaatttaggaactctaatttaagtttatgttccaattatccttgagggagtaagacccc 15299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 164 - 337
Target Start/End: Original strand, 8697947 - 8698120
Alignment:
Q  164 tattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacaga 263  Q
    |||||||||||||| | || |||||||||||||||| |  ||||||||||||| |||||||  ||||||||  || |||||  ||||| ||   || |||    
T  8697947 tattcagttattttatgtttgctatttagttttactattgtgcgtaagatttgactcctctagagcataactctggtttaggaacttaggtgacgaaaga 8698046  T
Q  264 tcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcga 337  Q
     |  | ||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  8698047 gcaaactattgatatttatatctgtctaaccaggaagtagttaattagtaattagtgaaacaaactgaaagcga 8698120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 16114155 - 16114067
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||||||||| |||||||  ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||    
T  16114155 gtaatttgtttttagttaccatggataactaaatctttttaggttaggtttctaagatgaacctctattttatttgttggataattatt 16114067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 17120544 - 17120680
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtc 160  Q
    |||||| | ||||| ||||||| ||||| |||||||||||| ||| |||| |||||||||||||| |||  |||||||| |||||| ||||||||| ||     
T  17120544 taatttttctttagttaccatgtgtaacaaaatctttttaggttatggttataagatgaacctctgtttattttgttggataattatttaatttaatgta 17120643  T
Q  161 ttttattcagttattttctattcgctatttagtttta 197  Q
     |||||| ||||||||||| |||||||||||||||||    
T  17120644 gtttatttagttattttctgttcgctatttagtttta 17120680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 405 - 660
Target Start/End: Original strand, 16787137 - 16787391
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    ||||||||||  |||||||||||||| ||| ||||| ||||||| ||| || | ||||| |||||  || | ||||   |||||||||||||||||||||    
T  16787137 gtaactagttattaattaaggaaacaagtgacttcatgacttaaatcagcctaataacttcattcacctataaccttggtaaggtagacgctgatagggc 16787236  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttgga 602  Q
    |||||||||||| |||||||||| |||||| |||  |||||||| |||| ||||||||       || ||||||||||| ||  |  | |||||||||||    
T  16787237 tgcccgtttgtataactaccgag-aggagaatgtgctatgtactcctaagattcatagctgggaaaatctttaggaacactgcca--tgatacctttgga 16787333  T
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    |||||| |||| | || |||| | |||||||||||||||||  || ||||||||||||    
T  16787334 aatttatgaacaccaacttaagtctatgtttcaattacccccgagggagtaagacccc 16787391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 85 - 225
Target Start/End: Complemental strand, 34481986 - 34481846
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattc 183  Q
    |||||||||| |||||||  ||||||||||||| ||||||| ||||| ||| ||||||||||||| ||||||| ||  |||| |||| |||||| | |||    
T  34481986 gtaactaaatatttttaggctagggttctaagaagaacctccatttt-tttattgggtaattatttaatttaatgttgtttactcagatattttatgttc 34481888  T
Q  184 gctatttagttttactgtaatgcgtaagatttgtctcctctg 225  Q
    ||||| |||||||| |||| |||||||||||||| |||||||    
T  34481887 gctatgtagttttattgtagtgcgtaagatttgtttcctctg 34481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 10063694 - 10063807
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctcta-ttttgtttgttgggtaattattaatttaaagt 159  Q
    ||||||||| ||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||  | |||||||||||     
T  10063694 gtaatttgtctttagttaccatgaataactaaatctttttaggctagggttctaagatgaacctctatttttgtttgttggata--ttttaatttaaag- 10063790  T
Q  160 cttttattcagttatttt 177  Q
     ||||||||| |||||||    
T  10063791 -ttttattcatttatttt 10063807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 280 - 526
Target Start/End: Complemental strand, 26810706 - 26810454
Alignment:
Q  280 tatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagctatcc-tgatagtaagtactcaggggtgtgacatatctaa 378  Q
    ||||| |||||||  ||||||||||||||| || | ||| |||||||  ||||||||||  | || ||| |||||||||| |  |  |||||||| ||||    
T  26810706 tatatctgtctaattaggaagtaattaattggtaactagagaaacaagctgaaagcgagtgaaccctgaaagtaagtacttatagaggtgacatacctaa 26810607  T
Q  379 tattgatgaatatctatttaaatat---agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttcttt 475  Q
    |||||||| ||||||| | ||||     ||||| ||| | ||||||||| ||||||||||||||| ||||||| |||||| | |||||||  |||| |||    
T  26810606 tattgatgtatatctagtaaaattaggaagtaattaggtagtaattaagaaaacatgtgccttcatgacttaaatcaacctagtaactccgctctttttt 26810507  T
Q  476 cac--ctataaggtagacgctgatagggctgcccgtttgtagaactaccgaga 526  Q
    |||  |  ||||||||||  ||||| | |||||||||||||||||||||||||    
T  26810506 caccacggtaaggtagacattgataagactgcccgtttgtagaactaccgaga 26810454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 27116849 - 27116984
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtct 161  Q
    ||||||| ||||| ||||||| |||||||||| ||||||   ||||||||||||||||||||||||||  |||||| | |||||| ||||||||| | |     
T  27116849 aatttgtctttagttaccatgtgtaactaaatatttttaagctagggttctaagatgaacctctatttattttgttagataattatttaatttaatgacg 27116948  T
Q  162 tttattcagttattttctattcgctatttagtttta 197  Q
    |||||| | || |||||| |||||||||||||||||    
T  27116949 tttatttaattgttttctgttcgctatttagtttta 27116984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 405 - 561
Target Start/End: Complemental strand, 16113609 - 16113451
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggc 502  Q
    |||||||||| ||||||||||||||| ||| ||| |||||||||  ||||||| ||| |||||| ||||  |||||   ||||||||||||||||||||     
T  16113609 gtaactagttagtaattaaggaaacaagtgactttacgacttaaagcaacccaataaatccatttttctcacaccttggtaaggtagacgctgatagggt 16113510  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcataga 561  Q
    || | ||||||||||||| ||| |  || |||||  || |||||||||| |||||||||    
T  16113509 tgactgtttgtagaactatcgaaagagaaagtgtgctaggtacttctaagattcataga 16113451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 28009210 - 28009115
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaa 156  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||  |||| ||| || || |||||||||    
T  28009210 gtaatttatttttagctaccatgtgtaactaaatctttttaggttagtattctaagatgaacctctatttattttgctggatattttttaatttaa 28009115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 18735249 - 18735314
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  18735249 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 18735314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 795 - 914
Target Start/End: Complemental strand, 17837813 - 17837693
Alignment:
Q  795 aactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgc 893  Q
    ||||||||| |||||| ||||||||| ||||||| ||||||| ||  |||||||||| ||||||||| |  ||| ||||||||||||||||||||| |||    
T  17837813 aactcatcagttagatggtctacttaaaataatttaacttgacttgactgttaattaattccaacaaatggatagaggggattcaaagaatcctaagcgc 17837714  T
Q  894 cactaacattccgcaatcaaa 914  Q
    |  ||||| || |||||||||    
T  17837713 cggtaacactctgcaatcaaa 17837693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 15159514 - 15159621
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat-tttgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| ||||  ||||||||||||||||| | | | |||||||| |||||| ||||||||| |    
T  15159514 gtaatttgtttttagttaccatgtgtaactaaatatttttaggttagatttctaagatgaacctctgtatatttttgttggataattatttaatttaatg 15159613  T
Q  159 tcttttat 166  Q
    ||||||||    
T  15159614 tcttttat 15159621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 21983730 - 21983793
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  21983730 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacct 21983793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 18528240 - 18528305
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  18528240 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctct 18528305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 20107236 - 20107171
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  20107236 gtaatttgtttttagttaccatgtgtaactaaacctttttaggttagagttctaagatgaacctct 20107171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 21333761 - 21333826
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  21333761 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctct 21333826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 33713637 - 33713500
Alignment:
Q  87 aactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagtta-ttttctattcgc 185  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||||||||  |||  ||||||| ||||  |||||||||||| ||||| | || |    
T  33713637 aactaaacccttttagattagggttctaagatgaacctctattttgtttgttgg--aatatttaattt-aagttctttattcagttatttttcgaatc-c 33713542  T
Q  186 tatttagttttactgtaatgcgtaagatttgtctcctctgaagc 229  Q
    |||||| ||||||  || | ||||||||||||||| ||||||||    
T  33713541 tatttaattttac--tatttcgtaagatttgtctcttctgaagc 33713500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 22621280 - 22621176
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt-gtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||| ||||  ||||||| ||||||||||||||||||  ||||||||||| |||||||||||||||  |||||||| || ||| ||||||||||     
T  22621280 gtaatttgtctttatttaccatgtgtaactaaatctttttaggctagggttctaaaatgaacctctattttactttgttggatatttatttaatttaaaa 22621181  T
Q  159 tcttt 163  Q
    |||||    
T  22621180 tcttt 22621176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 24055077 - 24055014
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||||||| |||||||||||||||||  |||| ||||||||||||||||    
T  24055077 gtaatttgtttttagttaccatgtgtaactaaatctttttatgttagagttctaagatgaacct 24055014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 26612050 - 26612117
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||| ||||||||||||||||||||    
T  26612050 gtaatttgtttttagttaccatgtttaactaaatctttttaggatagagttctaagatgaacctctat 26612117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 27910280 - 27910201
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||  ||||||| ||||||||||||||||||| ||||||||    
T  27910280 gtaatttgtctttagttaccatgagtaactaaaccatattagggtagggttgtaagatgaacctctattttatttgttgg 27910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 18831571 - 18831509
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  18831571 atttttttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 18831509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 13267241 - 13267144
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaa 156  Q
    ||||||| ||||||| ||||||| |||||||| ||||||||| ||||  || |||||||||||||||||| | ||||||||||| ||| |||||||||    
T  13267241 gtaatttatttttagttaccatgtgtaactaattctttttaggttagaattataagatgaacctctatttatttttgttgggtatttagttaatttaa 13267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 16180107 - 16180038
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    |||||||| |||||| | ||||| |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  16180107 gtaatttgcttttagtttccatgtgtaactaaatctttttaggttagagttctaagatgaaactctattt 16180038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 25264882 - 25264813
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||| ||||||||||||||||| | | |||| ||||||||| |||||||||||||||||| ||||||||    
T  25264882 tttagttaccatgagtaactaaaccctattaggttagggttcgaagatgaacctctattttatttgttgg 25264813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 25403085 - 25403150
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||| |||||||||| |||||||  ||||||||||||||||| |||| ||||||||||||||||||    
T  25403085 gtaaattgtttttagttaccatgtataactaaatctttttaggttagagttctaagatgaacctct 25403150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 755 - 827
Target Start/End: Complemental strand, 34481283 - 34481210
Alignment:
Q  755 tgtgcaacttgacag-ctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataat 827  Q
    ||||||||||||||  | |||||||||||| |||| | || |||||||||||||||||||||||||||||||||    
T  34481283 tgtgcaacttgacaaaccgattaggttatcacgtcccgacgaactcatcacttagatagtctacttagaataat 34481210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 12011863 - 12011951
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||||| || ||||| ||||||| ||||||||||||| |||| ||| || |||||||||||||||| |||  |||||||| ||||||||    
T  12011863 gtaattcgtctttagttaccatgtgtaactaaatcttattagattatggatctaagatgaacctctgtttattttgttggataattatt 12011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 235
Target Start/End: Original strand, 14239929 - 14240102
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta--ttaatttaaagtc 160  Q
    ||||||| ||||| | |||||  |||||||||||||||||  ||||||||||||| |||||| |||| |||||||||| || |||  || |||||| ||     
T  14239929 aatttgtctttagtttccatgtctaactaaatctttttaggctagggttctaagaggaacctgtattatgtttgttggatatttaattttatttaatgt- 14240027  T
Q  161 ttttattcagttattttct-attcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataacc 235  Q
     |||||||||||||||| | | ||   ||||| |||||||||  |||||||||| |||||||||| ||| ||||||    
T  14240028 atttattcagttattttttgaatc-agatttaattttactgtcgtgcgtaagatctgtctcctctcaagtataacc 14240102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 26021805 - 26021721
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||| ||||| ||||||| |||||||||| || |||| ||| ||||||||||||||||||| |||  |||||||| ||||||||    
T  26021805 tttgtctttagttaccatgtgtaactaaatattattaggttatggttctaagatgaacctctgtttattttgttggataattatt 26021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 27117022 - 27117094
Alignment:
Q  240 tttagacacttatgtagtgacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagt 312  Q
    ||||| |||||| ||||||||||  || |||||||||||||| ||||||||| | ||||||||||||||||||    
T  27117022 tttaggcacttaggtagtgacagggcccaatattgatatttacatatgtctatctaggaagtaattaattagt 27117094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 22623996 - 22623933
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||||||  ||||||||| |||||||| |||| ||||||||||||||||    
T  22623996 gtaatttgtttttagttaccatatgtaactaaacctttttaggttagagttctaagatgaacct 22623933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 23035693 - 23035824
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtctttt 164  Q
    |||| ||||| ||||||| |||||||| |  || ||| |||| |||||||||||||||||| |||  |||||||| |||||| |||||   | ||| |||    
T  23035693 ttgtctttagttaccatgtgtaactaagtagttataggttagagttctaagatgaacctctgtttattttgttggataattatttaataatatgtcgttt 23035792  T
Q  165 attcagttattttctattcgctatttagtttt 196  Q
    ||| ||||||||| | ||||||||||||||||    
T  23035793 atttagttattttatgttcgctatttagtttt 23035824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 424 - 578
Target Start/End: Complemental strand, 7220896 - 7220741
Alignment:
Q  424 ggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    ||||||||||| ||||| ||||||| | |  ||| ||| | ||||||||||||||||   |||||||||||  |||| |  |||||||||||||||||||    
T  7220896 ggaaacatgtggcttcatgacttaaattagtccattaatttcattcttctttcaccttggtaaggtagacga-gataagcttgcccgtttgtagaactac 7220798  T
Q  522 cgagaaggagagtgtattatgtacttctaaaattc-atagacaatggaacctttagga 578  Q
    ||||| |||| |||| | |||| ||||||| |||| |||| | |||||||||||||||    
T  7220797 cgagagggagtgtgt-tgatgtccttctaagattcaataggcgatggaacctttagga 7220741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 16113882 - 16113808
Alignment:
Q  148 ttaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcct 222  Q
    ||||| ||||||| |||||||||||||||| | || |||||||| ||||| | || |||||||||||||||||||    
T  16113882 ttaatctaaagtcgtttattcagttattttatgtttgctatttatttttaatatagtgcgtaagatttgtctcct 16113808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 20033819 - 20033889
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt 131  Q
    ||||||||||||||| ||||||||||||||||| || |||||  ||| |||||| ||||||| ||||||||    
T  20033819 gtaatttgtttttagttaccatgagtaactaaacctctttaggctagagttctatgatgaacatctatttt 20033889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 21450173 - 21450111
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacc 123  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||| ||||||||| |||||    
T  21450173 gtaatttatttttaggtaccatgtgtaactaaatctttttaggttagagttctaagaggaacc 21450111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 27545779 - 27545721
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    |||||||||| ||||||| |||||||||||||||||| || | ||||||||||||||||    
T  27545779 ttgtttttagttaccatgtgtaactaaatctttttaggtttgagttctaagatgaacct 27545721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 20147579 - 20147514
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||| |||||| ||||||| |||| ||||| ||||||||||||    
T  20147579 gtaatttgtttttagttaccatgtgtagctaaatatttttaggttagagttctgagatgaacctct 20147514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 21665778 - 21665843
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| || |||| |||| ||||| ||||||| |||| ||||||||||||||||||    
T  21665778 gtaatttgtttttagttatcatgtgtaattaaatatttttaggttagagttctaagatgaacctct 21665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 51471214 - 51471275
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||| || |||| |||||||||||||||||| |||| |||||||||||||||| |||||    
T  51471214 tttttagttaacatgtgtaactaaatctttttaggttagagttctaagatgaacctttattt 51471275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 486 - 522
Target Start/End: Complemental strand, 24281909 - 24281873
Alignment:
Q  486 gtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    |||||||||||||||||||||||||||||||||||||    
T  24281909 gtagacgctgatagggctgcccgtttgtagaactacc 24281873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 27972951 - 27972863
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||||||||| ||||||  |||||| ||||||||||| || | |||||||||||||||| | |||  |||||||| || |||||    
T  27972951 gtaatttgtttttagttaccatatgtaactgaatctttttaggttcgagttctaagatgaacctgtgtttattttgttggatatttatt 27972863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 14780875 - 14780938
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||| | |||||||  ||||||||||||||||| |||| ||||||||||||| ||||    
T  14780875 aatttgttttttgttaccatgtttaactaaatctttttaggttagagttctaagatgaaactct 14780938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 23037459 - 23037532
Alignment:
Q  464 ccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||||||||||||||   |||||||||| || | ||||||||||||||||||||||||||||| ||| |||||    
T  23037459 ccattcttctttcaccttcgtaaggtagactct-acagggctgcccgtttgtagaactaccgagagggaaagtgt 23037532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 524
Target Start/End: Complemental strand, 12209210 - 12209168
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccga 524  Q
    ||||||||||| |||||||||||||||||| ||||||||||||    
T  12209210 taaggtagacgttgatagggctgcccgtttttagaactaccga 12209168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 16360504 - 16360454
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggaga 532  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||| |||||    
T  16360504 taaggtagacgttgatagagctgctcgtttgtagaactaccgagagggaga 16360454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 22664797 - 22664759
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaacta 520  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  22664797 taaggtagacgctgatagggctgcctgtttgtagaacta 22664759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 26648504 - 26648558
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||| |||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  26648504 taaggtaaacgctgatagtgctccccgtttgtagaactgccgagagggagagtgt 26648558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 28008743 - 28008705
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaacta 520  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  28008743 taaggtagacactgatagggctgcccgtttgtagaacta 28008705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 44796004 - 44795950
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||||||| |||||||  ||||||||||||||||||| |||| |||||||||    
T  44796004 taaggtagacgttgataggattgcccgtttgtagaactactgagagggagagtgt 44795950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 16360900 - 16360835
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||| ||||| ||||||| ||||||| || ||| |||  ||||||||||||||||||||||||||    
T  16360900 tttgtctttagttaccatgtgtaactagatatttataggctagggttctaagatgaacctctattt 16360835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 860 - 925
Target Start/End: Original strand, 17017579 - 17017644
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaact 925  Q
    |||||||| ||||||||| ||||| ||| || ||||||||||||| |||||||||| |||| ||||    
T  17017579 aataaatagaggggattcgaagaacccttactgccactaacattctgcaatcaaaacaggttaact 17017644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 9402690 - 9402626
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||||| ||||||| |||||||  | ||||||| |||| ||||||||||||| ||||    
T  9402690 taatttgtttttagttaccatgtgtaactacttatttttaggttagagttctaagatgaatctct 9402626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 598 - 658
Target Start/End: Original strand, 13134667 - 13134727
Alignment:
Q  598 ttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacc 658  Q
    ||||||||||| |||||| ||||||| |||||| |||||||||| || || ||||||||||    
T  13134667 ttggaaatttaagaactcaaatttaagtttatgcttcaattacctctgagagagtaagacc 13134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 920
Target Start/End: Original strand, 24306813 - 24306869
Alignment:
Q  864 aatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggt 920  Q
    ||||||||||||||||||||||||||||| | ||||||||   ||||||||| ||||    
T  24306813 aatataggggattcaaagaatcctaaccgtcgctaacatttttcaatcaaaacaggt 24306869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 16113745 - 16113654
Alignment:
Q  272 ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag-ctatcctgatagtaagtactcagg 362  Q
    ||||||||||||| |||||||  |||||||||||| ||||| | |||||||| |||  |||||||||   ||| |||||||||||||| |||    
T  16113745 ttgatatttatatctgtctaatgaggaagtaattagttagtaactagcgaaagaaaccgaaagcgagtggatcgtgatagtaagtacttagg 16113654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 17609907 - 17609969
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| | ||||| ||   ||||||||||||| |||| ||||||||||||||||||    
T  17609907 gtaatttgtttttagttgccatgtgt---taaatctttttaggttagagttctaagatgaacctct 17609969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 18826756 - 18826689
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    ||||||||||| ||| || |||| ||||||||||| |||||| | || |||||||| |||||||||||    
T  18826756 gtaatttgtttctagttatcatgtgtaactaaatccttttaggtgagagttctaagttgaacctctat 18826689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 25960208 - 25960327
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtctttta-ttcagt-tattt 176  Q
    |||||||| ||| || ||| ||| ||||||||||||||||||| |||||||  |||||||  |||||| ||||||||| ||  |||| || ||| |||||    
T  25960208 catgagtagctacatatttataggttagggttctaagatgaacttctatttgttttgttgcataattatttaatttaatgttgtttattttagtatattt 25960307  T
Q  177 tctattcgctatttagtttt 196  Q
    ||| ||||||||| ||||||    
T  25960308 tctgttcgctattaagtttt 25960327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 521
Target Start/End: Complemental strand, 33191314 - 33191275
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  33191314 taaggtagacgctgatagggctacccgtttatagaactac 33191275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 845 - 915
Target Start/End: Complemental strand, 33712928 - 33712857
Alignment:
Q  845 ttaattatttccaaca-ataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaa 915  Q
    |||||||||||||| | || |||| ||||||||||||||| |||||||  | ||||||||| ||||||||||    
T  33712928 ttaattatttccaatagatgaatagaggggattcaaagaaccctaaccatcgctaacattctgcaatcaaaa 33712857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 996 - 1046
Target Start/End: Complemental strand, 9401595 - 9401542
Alignment:
Q  996 aacgcaaattgtttggacgaaacgaca--tcatgt-gatacgatactctactta 1046  Q
    ||||| |||||||||||||||||||||  |||||| ||||||||||||||||||    
T  9401595 aacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctactta 9401542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 15812193 - 15812287
Alignment:
Q  104 ttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaa-gtcttttattcagttattttctattcgctatttagtttta 197  Q
    |||| ||||||||||||||  ||||||  |||||||| |||||||| | ||| | ||  |||||| ||||||||| | |||||||||||||||||    
T  15812193 ttagagttctaagatgaactcctatttattttgttggataattatttaattatatgttgtttatttagttattttatgttcgctatttagtttta 15812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 937 - 966
Target Start/End: Original strand, 3591598 - 3591627
Alignment:
Q  937 aacagattaactttgcaaactttaaaccct 966  Q
    ||||||||||||||||||||||||||||||    
T  3591598 aacagattaactttgcaaactttaaaccct 3591627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 15543015 - 15543084
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||| | |||||||  ||| ||| ||||||||  |||| |||||||||||||| |||||||    
T  15543015 gtaatttgttttttgttaccatgtataattaattctttttacgttagagttctaagatgaacttctattt 15543084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 26648076 - 26648169
Alignment:
Q  104 ttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttattttctattcgctatttagtttt 196  Q
    |||| |||||||||||||||||| |||  |||||||| |||||| |||||   | ||| |||||| ||||||||| | |||||| |||||||||    
T  26648076 ttagagttctaagatgaacctctgtttattttgttggataattatttaataatatgtcgtttatttagttattttatgttcgctttttagtttt 26648169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 61 - 980
Target Start/End: Original strand, 820552 - 821500
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||| | ||||||| ||||||||||||| | ||  ||||||||||| ||||||||| |||||||||||||| |||||||| |||||||| |    
T  820552 gtaatttgtgtttggttaccatgggtaactaaatcttctcaggctagggttctaacatgaacctcaattttgtttgttggataattatttaatttaaaat 820651  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagattt-gtctcctctgaagcataaccttgatttagacacttatgtagtg 258  Q
    ||| |||||||||||||| | |||||||||||||| ||||||| ||| |||||||| ||||||| || |||||| || | |||||| |||||| ||||||    
T  820652 cttatattcagttattttatgttcgctatttagttatactgtagtgcataagattttgtctcctatgtagcatatccctaatttaggcacttaggtagtg 820751  T
Q  259 acagatcctaatattgatatt--------------tatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatc 343  Q
    ||| | |||| ||||||||||              ||||| ||| |||||| ||| |||||||||||| | |||  |||||||  |||||| ||| || |    
T  820752 acaaagcctattattgatattcatatcttgatatttatatttgtttaaccaagaaataattaattagtaagtagtaaaacaaaccgaaagcaagcgtacc 820851  T
Q  344 ctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaatatagtaactagttggtaattaaggaaacatgtgccttcacga 443  Q
    ||||| ||||||||| |||   |||||||| |||||||||||||| || |  | ||||   |||  ||| | ||||||||||||||| ||| |||||| |    
T  820852 ctgat-gtaagtacttaggaaggtgacatacctaatattgatgaacatttgctgaaatcaggtag-tagctagtaattaaggaaacaagtgacttcacaa 820949  T
Q  444 cttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattat 541  Q
    ||||| ||| |||| |||||||||||||||| ||| |   |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||  |||    
T  820950 cttaaatcagcccagtaactccattcttcttgcacattcgtaaggtagacgctgatagagcttcccgtttgtagaactaccgagagggagagtgtgctat 821049  T
Q  542 gtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacc 641  Q
    |||||||||| ||||||| |  | |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||     
T  821050 gtacttctaagattcatatatga-ggaacctttaggaacattgggaagtcgtacctttggaaatttacgaactctaatttaagtttatgtttcaattact 821148  T
Q  642 cctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagacctaatctataagagagtaagacccccgc 741  Q
    ||||||||||||||||||| ||| |||||||  ||||| |||||||||||||  |||||| || ||||||||| ||||||| ||||||||||| || |||    
T  821149 cctaagcgagtaagacccccacgcaccgtcacttggattagcaggtgcaacttgataggc-gaaggatagaccaaatctatgagagagtaaga-cctcgc 821246  T
Q  742 atgtaaggatcat-------------tgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataatt 828  Q
    | |||||||||||              |||||||||||||||||||||||||||| |||  |||| ||||||||||||| ||||||||||||||||||||    
T  821247 acgtaaggatcatcgtgcaaccagcaggtgcaacttgacagctgattaggttatcacgttccaacgaactcatcacttaaatagtctacttagaataatt 821346  T
Q  829 gaacttgaattttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaac-tt 926  Q
    ||||| || ||  |||||| ||| ||||||| |||||||| ||| |||||| |||||||||||||  || ||||||| |||||  ||| |||||||| ||    
T  821347 gaactcgacttgactgttatttaattccaacaaataaatagaggagattcagagaatcctaaccgtgaccaacattctgcaat-taaacaggtaaacttt 821445  T
Q  927 tctctgttgc-aacagattaactttgcaaactttaaacccttatctctttattta 980  Q
    |||||||||| |||| ||||| ||   ||||| |||||  |||||||||||||||    
T  821446 tctctgttgcaaacatattaaattgaaaaactctaaacttttatctctttattta 821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 61 - 532
Target Start/End: Original strand, 13907310 - 13907788
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    |||||||||| |||| ||||||| |||||||||||||||||   |||||||||| |||| ||||||||| ||||| |||| |||||||| ||||||||||    
T  13907310 gtaatttgttcttagttaccatgggtaactaaatctttttaagatagggttctaggatggacctctattctgtttattggataattatttaatttaaagt 13907409  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||||||||||||| | ||||||||||||| ||||  ||||  ||||||||||||||||||||| ||||||| |||||||| |||||| |||||||    
T  13907410 cgtttattcagttattttttgttcgctatttagtgttacactaatatgtaagatttgtctcctctgaaacataaccatgatttaggcacttaggtagtga 13907509  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaa-ttgaaagcgagc-tatcctgatagtaagtac 357  Q
    ||   |||||  ||||||||||||| || |||||  ||||||||||| ||||| | ||||||||||||    ||||| ||| || |||||||||||||||    
T  13907510 catggcctaaccttgatatttatatttggctaacttggaagtaattagttagtaactagcgaaacaaaccaaaaagcaagcgtaccctgatagtaagtac 13907609  T
Q  358 tcaggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaac 454  Q
    | ||| | |||||||| |||||||||||||| ||||  | ||||   ||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||    
T  13907610 ttaggag-gtgacatacctaatattgatgaaaatctgctgaaatatgatagtaactagttagtaattaaggaaacaagtgacttcacgacttaaatcaac 13907708  T
Q  455 ccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggaga 532  Q
    | | ||||||||||||  |  |||||   ||||  ||| |||||||||||| ||| |||||||||||||| ||| |||||    
T  13907709 ctagtaactccattctcttcgcaccttggtaagtaagatgctgatagggcttcccatttgtagaactaccaagatggaga 13907788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 70 - 639
Target Start/End: Complemental strand, 6290857 - 6290290
Alignment:
Q  70 ttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattc 168  Q
    |||||| |||||||||||||||||||| |||||  |||||||||||||| ||||| | || |||||||||| |||||||| |||||||| ||||||||||    
T  6290857 ttttagttaccatgagtaactaaatctctttaggctagggttctaagattaacctattttatgtttgttggataattatttaatttaaaatcttttattc 6290758  T
Q  169 agttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatccta 268  Q
    ||||||||| | |||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||| |||||| ||||||| ||| ||||    
T  6290757 agttattttatgttcgttatttagttttactgtagtgcgtaagattcgtctcctttgaagcataaccatgatttaggcacttaggtagtgatagagccta 6290658  T
Q  269 atattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgt 367  Q
    ||||||||||| ||||        |  |  | | ||  ||   | | ||||||||||||  |||||||||| || |||||||||||||| | ||||  ||    
T  6290657 atattgatattcatat--------cttgatatttatatatgtctaactagcgaaacaaaccgaaagcgagcgtaccctgatagtaagtatttagggaggt 6290566  T
Q  368 gacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactc 464  Q
    |||||| |||||||||||||| |||   | ||||    |||||| ||||  |||||||||||| || ||| ||||| ||||||| ||| | || |||||     
T  6290565 gacatacctaatattgatgaacatcagctgaaatcaggtagtaattagtaagtaattaaggaaccaagtgacttcatgacttaaatcagcacaataactt 6290466  T
Q  465 cattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagac 562  Q
    |||||| ||  |||||   |||||||||||||||||| | || | ||||||||||||||| ||||||||||| | ||||| |||||||| |||||||||     
T  6290465 cattctactcgcaccttggtaaggtagacgctgatagagatgtctgtttgtagaactaccaagaaggagagtatgttatgcacttctaagattcatagat 6290366  T
Q  563 aatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaatta 639  Q
     |  ||||||||||||||| |  |||  |||||||||||||||||||||||| |||||||   ||||||||||||||    
T  6290365 gagagaacctttaggaacact-agaaaccatacctttggaaatttaggaactttaatttaggattatgtttcaatta 6290290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 78 - 306
Target Start/End: Complemental strand, 20398400 - 20398171
Alignment:
Q  78 accatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattt 176  Q
    |||||| ||||||||||||| | ||  || ||||||||||| ||| |||| |||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  20398400 accatgggtaactaaatcttctaaggctatggttctaagataaacttctactttgtttgttggataattatttaatttaaagtcttttattcaattattt 20398301  T
Q  177 tctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgat 276  Q
    ||| || |||||||||||||| | || |||||||||||||| || |||||||||||||  | | ||||  ||||| |||||||||   ||||||| ||||    
T  20398300 tctgtttgctatttagttttattatagtgcgtaagatttgtttcttctgaagcataactctaaattaggaacttaggtagtgacatggcctaatactgat 20398201  T
Q  277 atttatatatgtctaaccaggaagtaatta 306  Q
    |||||||| | |||||||||||||||||||    
T  20398200 atttatatctatctaaccaggaagtaatta 20398171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 96 - 284
Target Start/End: Complemental strand, 22246330 - 22246141
Alignment:
Q  96 tttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagtt 194  Q
    |||||||  ||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||| | ||||||||| ||| ||||||||||    
T  22246330 tttttaggctagggttctaagatgaacctctattttatttgttggataattatttaatttaaagtcgtttatttaattattttctgttcactatttagtt 22246231  T
Q  195 ttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatat 284  Q
    |||||| | ||||||| ||||||||| | || |||  |||| ||| |||| |||||| ||||||||||  ||||||||||||||||||||    
T  22246230 ttactgcagtgcgtaatatttgtctcatgtggagcgcaaccctgacttaggcacttaggtagtgacagtgcctaatattgatatttatat 22246141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 566 - 660
Target Start/End: Complemental strand, 20398164 - 20398070
Alignment:
Q  566 ggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||    
T  20398164 ggaacctttaggaacactaggaagtcatacctttggaaatttaggaactctaatttaagtatatgtttcaattacctctgagcgagtaagacccc 20398070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 85 - 286
Target Start/End: Original strand, 22471175 - 22471377
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagttattttctattcg 184  Q
    ||||||||||||||||||   || |||||||||||||||| |||||| |||||||| |||||||| | || |||||| ||||| ||||||||||| ||||    
T  22471175 gtaactaaatctttttaggcaagagttctaagatgaacctttattttatttgttggataattatttaatttaagtctgttatttagttattttctgttcg 22471274  T
Q  185 ctatttagttttactgtaatgcgtaagatttgtctcc-tctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttata 283  Q
    |||||||||||||||  | || ||||||||||||||| ||||||||  |||| |  ||| | ||||||  ||||||||     |||||||||||||||||    
T  22471275 ctatttagttttactacagtgtgtaagatttgtctccttctgaagcgcaaccgtagttttggcacttagatagtgacatggtataatattgatatttata 22471374  T
Q  284 tat 286  Q
    |||    
T  22471375 tat 22471377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 23755104 - 23755240
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtc 160  Q
    |||||||||||||| ||||||| |||||||||| ||||||| ||| |||||||||||||||||||||||  |||||||  |||||| ||||||||| |||    
T  23755104 taatttgtttttagttaccatgtgtaactaaatatttttaggttatggttctaagatgaacctctatttattttgttgtataattatttaatttaatgtc 23755203  T
Q  161 ttttattcagttattttctattcgctatttagtttta 197  Q
     |||||| | |||||||||||| | ||||||||||||    
T  23755204 gtttatttatttattttctatttgttatttagtttta 23755240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 23699145 - 23699282
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||||  |||||| ||||||||| ||    
T  23699145 gtaatttgtttttagttaccatgtgtaattaaatatttttaggttatggttctaagatgaacctctatttattttgttgtataattatttaatttaatgt 23699244  T
Q  160 cttttattcagttattttctattcgctatttagtttta 197  Q
    | |||||| | |||||||||||| ||||||| ||||||    
T  23699245 cgtttatttatttattttctatttgctatttcgtttta 23699282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 23717600 - 23717737
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||||  |||||| ||||||||| ||    
T  23717600 gtaatttgtttttagttaccatgtgtaattaaatatttttaggttatggttctaagatgaacctctatttattttgttgtataattatttaatttaatgt 23717699  T
Q  160 cttttattcagttattttctattcgctatttagtttta 197  Q
    | |||||| | |||||||||||| ||||||| ||||||    
T  23717700 cgtttatttatttattttctatttgctatttcgtttta 23717737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 23736056 - 23736193
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||||  |||||| ||||||||| ||    
T  23736056 gtaatttgtttttagttaccatgtgtaattaaatatttttaggttatggttctaagatgaacctctatttattttgttgtataattatttaatttaatgt 23736155  T
Q  160 cttttattcagttattttctattcgctatttagtttta 197  Q
    | |||||| | |||||||||||| ||||||| ||||||    
T  23736156 cgtttatttatttattttctatttgctatttcgtttta 23736193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 404 - 558
Target Start/End: Original strand, 27853925 - 27854080
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||| |||||| |||||||| ||  ||||||||||||| ||| || | |||||||| || ||||||||||  |||||||||||||| ||||||    
T  27853925 agtaactagttagtaatttaggaaacaggttacttcacgacttaaatcagcctagtaactccactcatctttcaccttgataaggtagacgctaataggg 27854024  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcat 558  Q
    || | |||||||||||||| |||| |||||||||| |||||| ||||||| ||||||    
T  27854025 cttctcgtttgtagaactatcgag-aggagagtgtgttatgtgcttctaagattcat 27854080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 21018553 - 21018401
Alignment:
Q  403 tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacctataaggtagacgctgatagggc 502  Q
    |||||||||||| ||||||||||||| |||   ||||||||||||| |||||||| ||||||||||||   ||||| ||  |||||||| | |||||||     
T  21018553 tagtaactagttagtaattaaggaaaaatga--cttcacgacttaaatcaacccaataactccattctc--ttcacgta--aggtagacacggatagggt 21018460  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcataga 561  Q
    |||||||||||||||| ||  ||||||||||||| |||||| ||| ||| |||||||||    
T  21018459 tgcccgtttgtagaaccacttagaaggagagtgtgttatgtgcttgtaagattcataga 21018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 405 - 712
Target Start/End: Complemental strand, 22246005 - 22245701
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    ||||||| || |||||||||||||||  || ||||||||||||| ||| | || |||||||||||| || ||||||   | |||||||| ||||||||||    
T  22246005 gtaactaattagtaattaaggaaacaattgacttcacgacttaaatcagctcagtaactccattctcctctcaccttggtgaggtagacactgatagggc 22245906  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttgga 602  Q
    | ||||||||||||||||| |||| | | |||||  ||||||||||  | ||   ||        |||||||||||||||||   | ||||| ||||| |    
T  22245905 tacccgtttgtagaactactgagaggaaaagtgtgctatgtacttcatagatgggta--------aacctttaggaacattgacca-tcataactttgta 22245815  T
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc-----tacgaaccgtcatgtggatcagcaggtgcaactcaat 697  Q
    ||||||||||| | ||||||| | || |||||||||||||||||  ||||||||||||     || | | |  |||||| || ||||||||||||||||     
T  22245814 aatttaggaacgccaatttaaatctaagtttcaattacccctaacggagtaagaccccacacgtaaggatcaccatgtg-atgagcaggtgcaactcaac 22245716  T
Q  698 aggcggagggataga 712  Q
    |||||||||||||||    
T  22245715 aggcggagggataga 22245701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 23055283 - 23055399
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| |||||||||||||||| |||||||||  ||||||| |||||||||| |||||| |||||||||| || ||| |||||||||| |    
T  23055283 gtaatttgtctttagttaccatgagtaactaagtctttttaggctagggttgtaagatgaacttctattctgtttgttggatatttatttaatttaaa-t 23055381  T
Q  160 cttttattcagttatttt 177  Q
     ||||||||| |||||||    
T  23055382 tttttattcatttatttt 23055399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 755 - 974
Target Start/End: Original strand, 13908011 - 13908232
Alignment:
Q  755 tgtgcaacttgacagct-gattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatt 853  Q
    ||||||||||||||  | |||||||||||   ||| | || |||||||||| |||||||||||||| |||||||||||| ||| ||   |||| |||| |    
T  13908011 tgtgcaacttgacaaattgattaggttataatgtcccgacgaactcatcacctagatagtctacttcgaataattgaacatgacttgattgtttattaat 13908110  T
Q  854 tccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggt-aaactttctctgttgc-aacagattaacttt 950  Q
    |||||||| | | |  |||||||||||| |||||||||||||||||||||||  || || ||| |||| |||||| |||||| || || ||||||| |||    
T  13908111 tccaacaaatgagtggaggggattcaaataatcctaaccgccactaacattctacattc-aaacaggtaaaacttgctctgtagcaaatagattaaattt 13908209  T
Q  951 gcaaactttaaacccttatctctt 974  Q
     |||||| ||||||||||||||||    
T  13908210 -caaactctaaacccttatctctt 13908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 796 - 982
Target Start/End: Complemental strand, 6290198 - 6290012
Alignment:
Q  796 actcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgcc 894  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |  ||||||||| |||| || ||| | ||  ||||||||||| |||||||||| ||    
T  6290198 actcatcacttagatagtctacttagactaattgaacttgactataatgttaattaattcctacaaatgagta-gggggattcaaataatcctaaccacc 6290100  T
Q  895 actaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaaactttaaacccttatctctttatttatt 982  Q
     ||||||||| ||||| |||| | ||||  || ||||||||| |||||| |||  ||| ||| | ||||||  ||||||||||||||||    
T  6290099 gctaacattctgcaattaaaacaagtaactttgctctgttgcaaacagaataa-attgaaaaatctaaaccactatctctttatttatt 6290012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 61 - 244
Target Start/End: Complemental strand, 20886225 - 20886040
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| |||||||||||||||||| |||||||  || ||||||||||||||||| |||| || ||||| | |||||   ||| |||||||    
T  20886225 gtaatttgtctttagttaccatgagtaactaaatatttttaggctaaggttctaagatgaacctttattctggttgttagataatttatttattttaaag 20886126  T
Q  159 tcttttattcagttattt-tctattcgctatttagttttactg-taatgcgtaagatttgtctcctctgaagcataaccttgatttag 244  Q
    || |||||| |||||||| ||| || | ||  ||||||||||| |  || ||||||||||||||||| ||||||||||| ||| ||||    
T  20886125 tc-tttatttagttatttatctttttgtta-ctagttttactgttgttgtgtaagatttgtctcctccgaagcataaccctgacttag 20886040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 218
Target Start/End: Original strand, 21019045 - 21019201
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||| | ||||||||||||||||||||||| ||  ||||||| |||||||||| | |||| |||||||||| ||| |||| ||||||||||    
T  21019045 gtaatttgtctttggttaccatgagtaactaaatcttttgagactagggttttaagatgaactt-tattctgtttgttggataactatttaatttaaagt 21019143  T
Q  160 cttttattcagttattttct-attcgctatttagttttactgtaatgcgtaagatttgtc 218  Q
    |||| ||||| ||||||| | | || ||||||| ||||||| |  |||||||||||||||    
T  21019144 cttt-attcatttatttttttaatc-ctatttaattttactttcgtgcgtaagatttgtc 21019201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 26092282 - 26092136
Alignment:
Q  77 taccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagttattt 176  Q
    |||||||||||| |||| ||| ||||  ||||||||||||||||||||||||||||||||||||   |||||| | || ||||  |||||||||||||||    
T  26092282 taccatgagtaaataaaccttattagggtagggttctaagatgaacctctattttgtttgttgg---attatttaatttaagttctttattcagttattt 26092186  T
Q  177 tct-attcgctatttagttttactgtaatgcgtaagatttgtctcctctgaag 228  Q
    | | | || ||||||| ||||||  || ||| ||| |||||||||||||||||    
T  26092185 tatgaatc-ctatttaattttac--tattgcataacatttgtctcctctgaag 26092136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 8144573 - 8144436
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| ||| ||| ||||||||||||||| || ||| | ||||||||||||| |||||||  |||||||| |||||| ||||||||| ||    
T  8144573 gtaatttgtctttagttacaatgtgtaactaaatcttttgaggttatgattctaagatgaacttctatttattttgttggataattatttaatttaatgt 8144474  T
Q  160 cttttattcagttattttctattcgctatttagtttta 197  Q
      |||||| | |||||||||  |||||||  |||||||    
T  8144473 tgtttatttatttattttctgatcgctataaagtttta 8144436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 16244721 - 16244826
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaagtc 160  Q
    ||||||||||||| || |||| |||||||| ||||||||| |||| |||||||||||||||||||||| | |||||||| || ||| ||||||||| |||    
T  16244721 aatttgtttttagttatcatgtgtaactaattctttttaggttagagttctaagatgaacctctatttatttttgttggatatttatttaatttaatgtc 16244820  T
Q  161 ttttat 166  Q
     |||||    
T  16244821 atttat 16244826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 19575232 - 19575297
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||| ||||    
T  19575232 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaatctct 19575297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 25851694 - 25851759
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||    
T  25851694 gtaatttgtttttagctatcatgtgaaactaaatctttttaggttagagttctaagatgaacctct 25851759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 768 - 927
Target Start/End: Original strand, 8556904 - 8557062
Alignment:
Q  768 agctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaat 866  Q
    |||||||||||||||| ||||  |||||||| || ||||| ||||||||||||||||| |||||  |||  |  || ||||| | ||||||||| |||||    
T  8556904 agctgattaggttatcacgtct-aacaaacttattacttaaatagtctacttagaata-ttgaatgtgatgtgactcttaatgagttccaacaaataaat 8557001  T
Q  867 ataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt 927  Q
    | ||| ||||||||||||| |||| | |  |||||||| |||||||||| |||||||||||    
T  8557002 agaggagattcaaagaatcataactgtcgttaacattctgcaatcaaaagaggtaaacttt 8557062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 31284998 - 31285105
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| |||| || ||||||||||||| |||  ||| |||||||||||||||||||||||  ||||||||  ||||| ||||||||| ||    
T  31284998 gtaatttgtctttagttaccttgtgtaactaaatcttattatgttatggttctaagatgaacctctatttattttgttggacaattatttaatttaatgt 31285097  T
Q  160 cttttatt 167  Q
    | ||||||    
T  31285098 cgtttatt 31285105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 3115883 - 3115937
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  3115883 taaggtagacactgataaggctgcccgtttgtagaactaccgagagggagagtgt 3115937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 407 - 561
Target Start/End: Complemental strand, 314767 - 314611
Alignment:
Q  407 aactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggctg 504  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||| | |  ||| |||||||||||||||  |||||   ||||||||| | ||||||| |||    
T  314767 aactagttagtaattaaggaaacaagtgacttcatgacttaaattagtccagtaactccattcttctcgcaccttcgtaaggtagatgttgataggactg 314668  T
Q  505 cccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcataga 561  Q
     | |||||||||| |||||||| ||| |  ||  ||||||||| ||| |||||||||    
T  314667 tctgtttgtagaattaccgagagggacaacgtgctatgtacttgtaagattcataga 314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 8882133 - 8882190
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  8882133 tttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 8882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 9780916 - 9780985
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||| ||||||| ||||||  |||||||| ||||||||| |||| ||||||||||||||||||||||    
T  9780916 gtaatttatttttagttaccatatgtaactaattctttttaggttagagttctaagatgaacctctattt 9780985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 20022582 - 20022647
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||| ||||| ||||||| ||||||||||| |||||| |||| ||||||||||||||||||    
T  20022582 gtaatttgtgtttagttaccatgtgtaactaaatcattttaggttagagttctaagatgaacctct 20022647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 757 - 821
Target Start/End: Complemental strand, 20397897 - 20397833
Alignment:
Q  757 tgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttag 821  Q
    ||||| |||||| |||||||||||||| |||| |||||||||||||||||| |||| ||||||||    
T  20397897 tgcaatttgacacctgattaggttatcacgtcccaacaaactcatcacttaaatagcctacttag 20397833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 28369495 - 28369579
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt 146  Q
    |||||| | ||||| ||||||| ||||||||||||||||||  | |||||||||||| |||||||||| || ||||||| |||||    
T  28369495 taatttctctttagttaccatgggtaactaaatctttttaggcttgggttctaagattaacctctattctggttgttggataatt 28369579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 28377313 - 28377397
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt 146  Q
    |||||| | ||||| ||||||| ||||||||||||||||||  | |||||||||||| |||||||||| || ||||||| |||||    
T  28377313 taatttctctttagttaccatgggtaactaaatctttttaggcttgggttctaagattaacctctattctggttgttggataatt 28377397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 28385135 - 28385219
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt 146  Q
    |||||| | ||||| ||||||| ||||||||||||||||||  | |||||||||||| |||||||||| || ||||||| |||||    
T  28385135 taatttctctttagttaccatgggtaactaaatctttttaggcttgggttctaagattaacctctattctggttgttggataatt 28385219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 8115955 - 8116018
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||| ||||| | ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  8115955 gtaattttttttttgttaccatgtgtaactaaatctttttaggttagagttctaagatgaacct 8116018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 16229022 - 16229089
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    |||||||| |||||| ||||||| |||| ||||||||||||| |||| |||||||||||| |||||||    
T  16229022 gtaatttgcttttagttaccatgtgtaattaaatctttttaggttagagttctaagatgatcctctat 16229089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 19910499 - 19910392
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaagt 159  Q
    |||||||||||||| ||||||| ||| |||||| ||||||| |||| ||||| |||||||||| | ||| |||||||||| || ||| ||||||||| ||    
T  19910499 taatttgtttttagttaccatgtgtatctaaatatttttaggttagagttcttagatgaacctttgtttatgtttgttggatatttatttaatttaatgt 19910400  T
Q  160 cttttatt 167  Q
    | ||||||    
T  19910399 cgtttatt 19910392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 41509568 - 41509461
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||| || |||| |||||||| | ||||||| |||| ||| |||||||||||||||||| | |||||||| || ||| ||||||||| |    
T  41509568 gtaatttgtttttagttatcatgtgtaactaattatttttagattagagttttaagatgaacctctatttatttttgttggatatttatttaatttaacg 41509469  T
Q  159 tcttttat 166  Q
    || |||||    
T  41509468 tcgtttat 41509461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 8144234 - 8144193
Alignment:
Q  493 ctgatagggctgcccgtttgtagaactaccgagaaggagagt 534  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  8144234 ctgatagggctgcccgtttgtagaactaccgagagggagagt 8144193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 8171097 - 8171032
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||| |||||| ||| ||| |||||||||||||||||| ||||  |||||||||||||||||    
T  8171097 gtaatttgcttttagttactatgtgtaactaaatctttttaggttagatttctaagatgaacctct 8171032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 12771915 - 12771984
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||| ||||||| ||||||| |||||||  ||||||||| ||||  |||||||||||||||||||||    
T  12771915 gtaatttatttttagttaccatgtgtaactagttctttttaggttagaattctaagatgaacctctattt 12771984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 14977166 - 14977101
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| ||||  || ||||||||||||||    
T  14977166 gtaatttatttttagttaccatgtgtaactaaatctttttagattagaattataagatgaacctct 14977101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 20338987 - 20339084
Alignment:
Q  77 taccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagttattt 176  Q
    ||||||||||||||||| | | |||| |||||||||||| | ||||||||||||| ||||||||  | ||||| |||| ||||| |||||||| ||||||    
T  20338987 taccatgagtaactaaaccctattagattagggttctaacacgaacctctattttatttgttgg--atttatttattttaagtc-tttattcaattattt 20339083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 8448135 - 8448024
Alignment:
Q  83 gagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttattttctat 181  Q
    |||||||||||| ||| |||  |||||||||| | |||||||||||||  ||| |||| |||||| ||||| ||| ||| |||||| ||||||||| | |    
T  8448135 gagtaactaaatatttataggctagggttctacgttgaacctctatttatttttttggataattacttaatgtaatgtcgtttatttagttattttttgt 8448036  T
Q  182 tcgctatttagt 193  Q
    | ||||||||||    
T  8448035 ttgctatttagt 8448024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 482 - 521
Target Start/End: Original strand, 12772386 - 12772425
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12772386 taaggtagacgctgatagggatgcccgtttgtagaactac 12772425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 21084183 - 21084148
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||||||||||||||||||||||||||||||    
T  21084183 tagggttctaagatgaacctctattttgtttgttgg 21084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 251
Target Start/End: Original strand, 27853631 - 27853768
Alignment:
Q  117 atgaacctctattttgtttgttgggtaatta--ttaatttaaagtcttttattcagttattttctattc-gctatttagttttactgtaat-gcgtaaga 212  Q
    ||||||||||||| || ||||||| |||||   || ||||||||||||| ||| ||||||||  | ||  |||||||| |||||||||  | ||||||||    
T  27853631 atgaacctctattctggttgttggataatttatttgatttaaagtcttt-atttagttatttatttttgtgctatttaattttactgttgttgcgtaaga 27853729  T
Q  213 tttgtctcctctgaagcataaccttgatttagacactta 251  Q
    ||||||||||||||||||||||  ||| |||| ||||||    
T  27853730 tttgtctcctctgaagcataactctgacttaggcactta 27853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 16221989 - 16221939
Alignment:
Q  486 gtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||| |||||    
T  16221989 gtagacactgatagggctgctcgtttgtagaactaccgagatggaaagtgt 16221939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 19169479 - 19169418
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacc 123  Q
    |||||||||||| || ||||||| |||||||||||||||||| | || |||||||||||||||    
T  19169479 gtaatttgtttt-agttaccatgtgtaactaaatctttttaggtaagagttctaagatgaacc 19169418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 19170835 - 19170905
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt 131  Q
    ||||||||||||||| ||||||| | |||||  | ||||||| |||| ||| |||||||||||||||||||    
T  19170835 gtaatttgtttttagttaccatgtgcaactacttatttttaggttagagttataagatgaacctctatttt 19170905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 2166676 - 2166733
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagat 118  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| ||||  |||||||||    
T  2166676 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagaattctaagat 2166733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 20121997 - 20122054
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| |||| ||  |||||||||| |||||| |||||||||||||||||||||||    
T  20121997 tttttagttaccttgtataactaaatcattttaggttagggttctaagatgaacctct 20122054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 522
Target Start/End: Complemental strand, 8267577 - 8267537
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  8267577 taaggtagacgctgatagggctgcccatttttagaactacc 8267537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 12805237 - 12805281
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||    
T  12805237 tagggttctaagatgaacctctatttgttttgttggataattatt 12805281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 19533190 - 19533146
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggt 110  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||    
T  19533190 ttgtttttagttaccatgtgtaactaaatctttttagtttagggt 19533146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 603 - 655
Target Start/End: Complemental strand, 21083755 - 21083703
Alignment:
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaag 655  Q
    ||||||||||||||||||||| |||||| |||||||||| || || |||||||    
T  21083755 aatttaggaactctaatttaagtttatgcttcaattacctctgagagagtaag 21083703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 860 - 916
Target Start/End: Original strand, 21380442 - 21380498
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaat 916  Q
    |||||||| ||||||||| |||||||||||||||   |||||||| |||||||||||    
T  21380442 aataaatagaggggattcgaagaatcctaaccgctgttaacattctgcaatcaaaat 21380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 2722922 - 2722985
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttatt 167  Q
    ||||||||||||||||||||||| ||  |||||||| |||||| ||||||||| ||| ||||||    
T  2722922 tagggttctaagatgaacctctacttgttttgttggataattatttaatttaatgtcgtttatt 2722985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 638
Target Start/End: Original strand, 13907835 - 13907882
Alignment:
Q  591 catacctttggaaatttaggaactctaatttaattttatgtttcaatt 638  Q
    |||||| ||||| |||||||||||| ||||||| ||||||||||||||    
T  13907835 cataccattggatatttaggaactccaatttaagtttatgtttcaatt 13907882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 521
Target Start/End: Original strand, 16245189 - 16245228
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  16245189 taaggtagacgctgatagggcttcccatttgtagaactac 16245228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 20885864 - 20885801
Alignment:
Q  417 taattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct 480  Q
    |||||||||||||| ||| |||||||||| || ||| |||| |||||||| |||| ||||||||    
T  20885864 taattaaggaaacaagtgacttcacgactgaaatcagcccagtaactccactcttttttcacct 20885801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 935
Target Start/End: Original strand, 23056009 - 23056104
Alignment:
Q  842 ctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaa-ctttctctgttg 935  Q
    ||||||| || ||||||||| |||| | | ||||||| |||||||||||||||| |||||||||  | ||||||| ||||||| ||| ||||||||    
T  23056009 ctgttaagtaattccaacaaataaaaaaaagggattcgaagaatcctaaccgccgctaacattctaccatcaaaacaggtaaatcttgctctgttg 23056104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 3115456 - 3115550
Alignment:
Q  104 ttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttattttctattcgctatttagtttta 197  Q
    |||| ||||||||||||||  ||||||  |||||||| |||||| ||||||  | ||| |||||| ||||||||||| ||| ||| |||||||||    
T  3115456 ttagagttctaagatgaactcctatttattttgttggataattatttaattatatgtcgtttatttagttattttctgttcactacttagtttta 3115550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 5508969 - 5508915
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||| ||||| |||||||| || ||||||||||||||||||| | |||||||    
T  5508969 taaggtacacgctcatagggcttcctgtttgtagaactaccgagaggtagagtgt 5508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 873 - 915
Target Start/End: Original strand, 6115354 - 6115396
Alignment:
Q  873 gattcaaagaatcctaaccgccactaacattccgcaatcaaaa 915  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||    
T  6115354 gattcaaagaattctaaccgccgctaacattctgcaatcaaaa 6115396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 8268002 - 8267957
Alignment:
Q  104 ttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||||||||||||||||||||||||||  ||| |||| ||||||||    
T  8268002 ttagggttctaagatgaacctctatttattttattggataattatt 8267957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 19909703 - 19909768
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||  |||| ||||||| ||||||| || ||||||  |||| ||||||||||||||||||    
T  19909703 gtaatttgtgattagttaccatgtgtaactatatatttttatgttagagttctaagatgaacctct 19909768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 61 - 694
Target Start/End: Original strand, 19762299 - 19762952
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||||||||| ||||||| |||||||||| |||||||  |||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  19762299 gtaatttgtttttagttaccatgggtaactaaatatttttaggctagggttctaagataaacctctattttgtttgttggataattatttaatttaaagt 19762398  T
Q  160 ctttt-attcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtg 258  Q
    ||||| ||||| ||  ||||| ||  |||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||  ||||| |||||     
T  19762399 ctttttattcattt--tttctgtttactatttagttttactgtagtgcgtaagatttgtctcctccgaatcataaccctgatttaggaacttaggtagtc 19762496  T
Q  259 acagatcctaatattgatatttatatatg--------------tctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatc 343  Q
    |||    |||||||||||||| |||| |               ||||||||||||||||||||||||| | ||||||||||||  |||||||||| || |    
T  19762497 acatggactaatattgatattcatatcttgatatttctatttttctaaccaggaagtaattaattagtaactagcgaaacaaaccgaaagcgagcgtacc 19762596  T
Q  344 ctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttca 440  Q
    |||||||||||||||  |||  |||||||| |||| ||||||||| |||||||  |||    |||||||||||| ||||||||||||||| ||| |||||    
T  19762597 ctgatagtaagtactttgggaggtgacatacctaacattgatgaacatctattgtaatgaggtagtaactagttagtaattaaggaaacaagtgacttca 19762696  T
Q  441 cgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtat 538  Q
    || ||||| ||| |||| |||||||||||||||| |||||   ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||      
T  19762697 cgtcttaaatcagcccaataactccattcttcttgcaccttggtaaggtagacgctgatagggctgtccgtttggagaactaccgagagggagagtgtgc 19762796  T
Q  539 tatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaatt 638  Q
     |||||||||||| ||||||| |  | |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||   |||||||||| |||    
T  19762797 aatgtacttctaagattcataaatgaaggaacctttaggaacattggaaagtcatacctttggaaatttaagaactctaatttgtgtttatgtttcgatt 19762896  T
Q  639 acccctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaactc 694  Q
    |||||||||||||||||||||| ||  |||||||  ||||||||||||||||||||    
T  19762897 acccctaagcgagtaagacccccacacaccgtcacatggatcagcaggtgcaactc 19762952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 85 - 388
Target Start/End: Original strand, 25578977 - 25579281
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaa--tttaaagtcttttattcagttattttctatt 182  Q
    ||||| |||||| |||||  ||||||||| ||||||||| ||||| ||||||| || |||||||| |  ||||||||  |||||||| ||||||||||||    
T  25578977 gtaaccaaatctatttaggctagggttcttagatgaaccactattatgtttgtaggataattatttaattttaaagtactttattcaattattttctatt 25579076  T
Q  183 cgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttat 282  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||   ||||||||||||||||||    
T  25579077 cgctatttagttttactataatgcataagatttgtctcctttgaagcataaccttgatttaggcacttaggtagtgacatgacctaatattgatatttat 25579176  T
Q  283 atatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatat 381  Q
    || |||||||||| |||||||||| ||||| | |  |||||||||  ||||| |||| || |||||||||||||||  ||||  |||||||| |||||||    
T  25579177 atctgtctaaccatgaagtaattacttagtaact--cgaaacaaaccgaaagtgagcgtaccctgatagtaagtacatagggaggtgacatacctaatat 25579274  T
Q  382 tgatgaa 388  Q
    |||||||    
T  25579275 tgatgaa 25579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 191 - 535
Target Start/End: Complemental strand, 26067053 - 26066704
Alignment:
Q  191 agttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatgtct 290  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||| |||||||| |||||| || || |||   |||||||||||||||||||| |||||    
T  26067053 agttttaatgtagtgcgtaagatttgtctcctctgatgcataaccctgatttaggcacttaggtggtcacatggcctaatattgatatttatatttgtct 26066954  T
Q  291 aaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatattgatgaat 389  Q
    ||||||||||| | || ||||| | ||| |||||||| ||||| ||||| || |||||||||||||||| ||| | |||||||| ||||||||||||||     
T  26066953 aaccaggaagtgactagttagtaactagagaaacaaactgaaaacgagcgtaccctgatagtaagtacttaggag-gtgacataactaatattgatgaaa 26066855  T
Q  390 atctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataa 484  Q
    || |  | ||||    ||||||||| || ||| ||||||||||| ||  ||||||||||||| |||    | |||||||||||| ||  |||||   |||    
T  26066854 atatgctgaaatcaggtagtaactaattagtacttaaggaaacaagttacttcacgacttaaatcagtgtagtaactccattctcctcgcaccttggtaa 26066755  T
Q  485 ggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtg 535  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26066754 gttagacgctgatagggctgcccgtttgtagaactaccgagagggagagtg 26066704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 85 - 561
Target Start/End: Complemental strand, 23266160 - 23265677
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta--ttaatttaaagtcttttattcagttattttctatt 182  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| |||||   |||||||||||||||| ||| ||||||||||| |     
T  23266160 gtaactaaatctttttaggttaggattctaagatgaacctctattttggttgttggataatttatttaatttaaagtcttt-atttagttattttcttta 23266062  T
Q  183 cgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtag-tgacagatcctaatattgatattta 281  Q
     | |||||||||||| |||  | |||||||| |||||||||||||  |||||| ||| |||| |||||| | || |||||   ||||||||||||    |    
T  23266061 tgttatttagttttattgttgttcgtaagatatgtctcctctgaaaaataaccctgacttaggcacttagggaggtgacattacctaatattgatgc--a 23265964  T
Q  282 tatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagct--atcctgatagtaag-tactcaggggtgtgacatatctaa 378  Q
    ||| |||||||  |||||||| ||||||||| | ||| ||||||  | ||||| |||    | | | | || ||| |||| ||||  |||| ||| |||     
T  23265963 tatctgtctaattaggaagtagttaattagtaaatagggaaacacgtcgaaagagagtagaaccttaagagaaaggtacttagggaggtgaaataccta- 23265865  T
Q  379 tattgatgaatatctatttaaatat---agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttcttt 475  Q
    |||||||| ||||||   | |||     |||| ||||||  |||||||||||||||||| ||||||||||||| ||| |||| ||||| |||||| ||||    
T  23265864 tattgatgcatatctgactgaatcaggaagtagctagttactaattaaggaaacatgtgacttcacgacttaaatcagcccaataacttcattctccttt 23265765  T
Q  476 caccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcataga 561  Q
    |||||   ||||||||| | |||||||| ||| |||||||||||||||||||| ||||||||| |||||| ||||||| |||| ||||    
T  23265764 caccttggtaaggtagatgttgatagggttgctcgtttgtagaactaccgagatggagagtgtgttatgtgcttctaagattcgtaga 23265677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 69 - 284
Target Start/End: Original strand, 17470309 - 17470525
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttatt 167  Q
    ||||||| |||||||  |||||||||||||||||  || ||||||||||||||||| | |||| |||||||| |||||||| |||||| |||| ||||||    
T  17470309 tttttagttaccatggataactaaatctttttaggctaaggttctaagatgaacctatgttttatttgttggataattatttaatttatagtcgtttatt 17470408  T
Q  168 cagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcct 267  Q
    |||||||||||| | || ||||| |||||||| || || ||||||||||||||||||| |||  |||| |  ||||| | |||| ||||||||||| |||    
T  17470409 cagttattttctgtacgatatttcgttttactatagtgtgtaagatttgtctcctctggagctcaaccctagtttaggcccttaggtagtgacagagcct 17470508  T
Q  268 aatattgatatttatat 284  Q
    |||||||||||||||||    
T  17470509 aatattgatatttatat 17470525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 405 - 693
Target Start/End: Complemental strand, 9521499 - 9521209
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    |||||||||| |||||||||||||||  || ||| ||||||||| |||    | |||||||||||| |||||||||   ||| ||||||| ||||||||     
T  9521499 gtaactagttagtaattaaggaaacaattgactttacgacttaaatcagtataataactccattctcctttcaccttcgtaaagtagacgatgatagggt 9521400  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttgga 602  Q
    || ||||||||||||||||||||| |||||||||  ||||||||||||| | | ||||   | | ||||||||  ||||||| |||||||||| |||| |    
T  9521399 tgtccgtttgtagaactaccgagagggagagtgtgctatgtacttctaagactaatagttgaggaaacctttaacaacattgagaagtcatacatttgaa 9521300  T
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaact 693  Q
    ||| ||||||| ||||||||| | ||| |||||||||||  | ||||||||||||||  | || | ||||||||||||| |||||||||||    
T  9521299 aatataggaacactaatttaagtatatatttcaattacctttgagcgagtaagaccctcatgatctgtcatgtggatcaacaggtgcaact 9521209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 61 - 284
Target Start/End: Complemental strand, 22871735 - 22871513
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    |||||| |||||||| ||||||| || | ||||| |||| || | |||||||||||||||||||||||||| |||||||| |||||||| |||||| |||    
T  22871735 gtaattagtttttagttaccatgggtgattaaatattttgaggt-agggttctaagatgaacctctattttatttgttggataattatttaatttatagt 22871637  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
      |||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||   |||| |  ||||| |||||| ||||| |    
T  22871636 tgtttattcagttattttctgttcgctatttagttttactgtagtgcgtaaga-ttgtctcctctgaagtgcaaccctagtttaggcacttaggtagtta 22871538  T
Q  260 cagatcctaatattgatatttatat 284  Q
    ||   |||||||||||| |||||||    
T  22871537 catggcctaatattgatgtttatat 22871513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 85 - 284
Target Start/End: Complemental strand, 26314717 - 26314519
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggta-attattaatttaaagtcttttattcagttattttctattc 183  Q
    ||||||||||||||||||  ||| |||||| ||||||||||||| || ||||||||  |  || |||||| |||||| |||||| ||||||||||| ||     
T  26314717 gtaactaaatctttttaggctagagttcta-gatgaacctctatgttatttgttggacatttttttaattaaaagtcgtttattaagttattttctgttt 26314619  T
Q  184 gctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttata 283  Q
    ||| ||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||  |||||||||||| |||||    
T  26314618 gct-tttagttttgctgtaatgcgtaagagttgtctcctctggagcataaccctgatttagacacttaggtagtgacagagtctaatattgatagttata 26314520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 62 - 282
Target Start/End: Original strand, 17170578 - 17170798
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtc 160  Q
    |||||||| ||||| ||||||  |||||||||||||||||||| ||||||| |||||||||||||||||  |||||| | |||||||| |||| || |||    
T  17170578 taatttgtctttagttaccatctgtaactaaatctttttagct-agggttcaaagatgaacctctatttattttgttagataattatttaattcaatgtc 17170676  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgac 260  Q
     |||||||||||||||||| || |||||||| |||||||||  ||||||||| |||||||||||| |||   ||| |  ||||| |||||| ||||||||    
T  17170677 atttattcagttattttctgtttgctatttaattttactgttgtgcgtaagacttgtctcctctggagcgccaccctagtttaggcacttaggtagtgac 17170776  T
Q  261 agatcctaatattgatatttat 282  Q
    |   ||||||||||||||||||    
T  17170777 atggcctaatattgatatttat 17170798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 285 - 640
Target Start/End: Original strand, 19085497 - 19085849
Alignment:
Q  285 atgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatattg 383  Q
    ||||||||| |||||||||||||||||| | ||| |||||||   |||||| ||  || ||| ||| | |||||| |||| ||||||||  |||||||||    
T  19085497 atgtctaactaggaagtaattaattagtaagtagtgaaacaaccagaaagctagtgtaccctaatattgagtacttagggatgtgacatgcctaatattg 19085596  T
Q  384 atgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct 480  Q
    ||||| || |  | ||||    | |||| ||||| |||||||||||||| | || |||||| |||||| ||| | || ||||||||||||| |||||       
T  19085597 atgaacatatgctgaaatcaggtggtaagtagttagtaattaaggaaac-tatgacttcacaacttaaatcagcacattaactccattctt-tttcattg 19085694  T
Q  481 ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaac 580  Q
     ||||||||| |||||||| ||||||| ||||||||||||| |||| | ||| |||  |||     ||||| ||||||| |  | |||||||||||||||    
T  19085695 gtaaggtagatgctgatagagctgcccatttgtagaactactgagaggaagaatgtgctat-----tctaagattcataaattagggaacctttaggaac 19085789  T
Q  581 attgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattac 640  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  19085790 attgggaagtcatacctttggtaatttaggaactctaacttaagtttatgtttcaattac 19085849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 61 - 284
Target Start/End: Complemental strand, 26121746 - 26121524
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||  || ||| ||||||||||||    
T  26121746 gtaatttgtctttagttacaatgtgtaactaaatctttttaggatagggttctaagatgaacctctattttatttgttgaatatttatttaatttaaagt 26121647  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||||| ||||||| | |||| ||||||| ||||||||  || ||||||||||| ||||||| ||||||||| |  |||||  ||||| |   |||    
T  26121646 c-tttattcaattattttatgttcgttatttagatttactgttctgtgtaagatttgtatcctctg-agcataaccctagtttagtaacttaggccatga 26121549  T
Q  260 cagatcctaatattgatatttatat 284  Q
    ||||  |||||||||||||||||||    
T  26121548 cagagtctaatattgatatttatat 26121524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 288 - 469
Target Start/End: Complemental strand, 18416997 - 18416812
Alignment:
Q  288 tctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatattgatg 386  Q
    |||||| |||||||||||||||||| | ||||||||||||  ||||| |||| || | ||||||||||| || ||||  ||||||||  |||||||||||    
T  18416997 tctaactaggaagtaattaattagtaaatagcgaaacaaaccgaaagtgagcgtaccatgatagtaagttcttagggaggtgacatacttaatattgatg 18416898  T
Q  387 aatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattc 469  Q
    || ||||||| ||||    |||||||||||| ||||||| ||||||| ||| ||||||||||||| ||| |||| ||||| |||||    
T  18416897 aacatctattgaaattatgtagtaactagttagtaattatggaaacaagtgacttcacgacttaaatcagcccaataactacattc 18416812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 18227067 - 18226891
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta--ttaatttaaag 158  Q
    ||||||| | ||||| ||||||||||| ||||||||| ||||  |||||||||||||| ||| | |||| || ||||||| |||||   ||||||||||     
T  18227067 gtaatttatctttagttaccatgagtagctaaatcttgttaggctagggttctaagattaacatatattctggttgttggataatttatttaatttaaaa 18226968  T
Q  159 tcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataacct 236  Q
    | ||| ||||||||||||||| |  | |||||| ||||||||| ||| ||||||||||||| ||||||||||||||||    
T  18226967 tgttt-attcagttattttctttatgttatttaattttactgtcatgtgtaagatttgtctgctctgaagcataacct 18226891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 482 - 660
Target Start/End: Original strand, 17171022 - 17171200
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaa---cctttagga 578  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||| ||||||||| |||| ||||||||  |  ||||   |||||||||    
T  17171022 taaggtagacgctgatagggctgcctgtttgtagaactatcaagagggagagtgtgttatgtactgctaagattcatag--atgggaaaaccctttagga 17171119  T
Q  579 acattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||| ||   | |||||| ||||||||||||||||||| |   ||| ||||||||||| |||||  |||| ||||||||||||    
T  17171120 acactgacca-tcatacttttggaaatttaggaactccaccataagtttatgtttcagttacctttaagggagtaagacccc 17171200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 482 - 642
Target Start/End: Original strand, 17470741 - 17470900
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    |||||||||| ||||||||| | ||||||||||||||||| |||| ||||||| | ||||||||| |||| |||||||||      ||||||||||||||    
T  17470741 taaggtagacactgatagggattcccgtttgtagaactactgagagggagagtttgttatgtactcctaagattcatagatgggaaaacctttaggaaca 17470840  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattaccc 642  Q
    ||||  |  |||||||||||||||||| |||  | || |||| ||||||||||||||||||    
T  17470841 ttggcca-ccatacctttggaaatttaagaatgccaacttaagtttatgtttcaattaccc 17470900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 19081045 - 19081165
Alignment:
Q  165 attcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagat 264  Q
    ||||||||||||| | ||||||||| ||||||||| |  ||||||||||||||||||| | || ||||||| |||||||| |||||| ||| ||||||      
T  19081045 attcagttattttatgttcgctattaagttttactatcgtgcgtaagatttgtctcctttaaaacataaccctgatttaggcacttaggtaatgacaggg 19081144  T
Q  265 cctaatattgatatttatata 285  Q
     ||||||||||||||||||||    
T  19081145 tctaatattgatatttatata 19081165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 482 - 660
Target Start/End: Complemental strand, 26252442 - 26252265
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||| |||||| ||  |  ||||| |||||| ||    
T  26252442 taaggtagatgctgatagggctgcccgtttgcagaactaccgagagggagagtgtgctatgtacttctaagattcattgatgagtgaaccattaggagca 26252343  T
Q  582 ttgggaagtcatacctttggaaatttaggaactct-aatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||   || ||   ||| ||||||||||| || |||| || ||||||||| ||||||| || || ||||||||||||    
T  26252342 ttggga--ccacactcatggtaatttaggaacgctaaattcaagtttatgtttgaattacctctgagagagtaagacccc 26252265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 13693004 - 13692891
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||||| ||||||||||||||||| |||||||   |||||||||||||||||||||||||||||| |||||   |||||| | || ||||     
T  13693004 gtaatttgtctttagttaccatgagtaactaaaactttttacgctagggttctaagatgaacctctattttgttcgttgg---attatttaatttaagtt 13692908  T
Q  161 ttttattcagttatttt 177  Q
     ||||||||||||||||    
T  13692907 ctttattcagttatttt 13692891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 482 - 660
Target Start/End: Complemental strand, 22871297 - 22871120
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||  || |||||  ||| |||| |||| |||||||||   |  |||| |||||||||    
T  22871297 taaggtagacgcggatagggttgcccgtttgtaaaactaccgagagagatagtgtgctatctactcctaagattcatagaaggtaaaacccttaggaaca 22871198  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
     | |  |  | ||||||||||||||||||||| | || |||| |||||||||||||||||||| || ||||||||||||    
T  22871197 ctcgccac-cttacctttggaaatttaggaacgccaacttaagtttatgtttcaattacccctgagggagtaagacccc 22871120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 17831075 - 17831015
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  17831075 catgagtaactaaatctttttaggttagggttctaagatgaacctctattttgattgttgg 17831015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 22920363 - 22920288
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |||| |||||    
T  22920363 tttgtttttagttaccatgagtaactaaatctttttaggttagggttgttagatgaacctctattatgttagttgg 22920288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 24266048 - 24266163
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttattttctattc 183  Q
    ||||||| || ||| ||| ||||||||||||||||||||||| |||  |||||||| |||||| ||||||||| ||| |||||| ||||||||||||||     
T  24266048 gtaactagatatttataggttagggttctaagatgaacctctgtttgttttgttggataattatttaatttaatgtcgtttatttagttattttctattt 24266147  T
Q  184 gctatttagttttact 199  Q
    || ||| |||||||||    
T  24266148 gcaattaagttttact 24266163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 24342679 - 24342794
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttattttctattc 183  Q
    ||||||| || ||| ||| ||||||||||||||||||||||| |||  |||||||| |||||| ||||||||| ||| |||||| ||||||||||||||     
T  24342679 gtaactagatatttataggttagggttctaagatgaacctctgtttgttttgttggataattatttaatttaatgtcgtttatttagttattttctattt 24342778  T
Q  184 gctatttagttttact 199  Q
    || ||| |||||||||    
T  24342779 gcaattaagttttact 24342794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 24164165 - 24164246
Alignment:
Q  148 ttaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagc 229  Q
    ||||||||| ||| ||||| |  ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24164165 ttaatttaatgtcgtttatacgtttattttttgttcgctatttagttttactgcaatgcgtaagatttgtctcctctgaagc 24164246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 482 - 642
Target Start/End: Complemental strand, 24261149 - 24260990
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    |||||||||||||||||||||| |||||||||| ||||||  |||   | |||||  ||||||| ||||| |||||||||| |  ||||||| | |||||    
T  24261149 taaggtagacgctgatagggctacccgtttgtataactactaagatataaagtgtgctatgtacgtctaagattcatagacgagagaaccttcaagaaca 24261050  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattaccc 642  Q
     |||  | |||||||||||||||| ||||||||||    ||| ||||||||||||||||||    
T  24261049 ctggcta-tcatacctttggaaatctaggaactcttccctaagtttatgtttcaattaccc 24260990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 482 - 653
Target Start/End: Original strand, 25579340 - 25579509
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    |||||||||||||||||||| ||| | ||| ||||| |||||||| ||||||| |  ||||||||||||| |||||| ||  |   |||||| |||||      
T  25579340 taaggtagacgctgataggggtgctcatttatagaaataccgagagggagagtatgctatgtacttctaagattcatggatgagataaccttaaggaaac 25579439  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagta 653  Q
     |||  |  ||||||||||||||||||||||||||| ||| || ||||||||||||||||||| || |||||    
T  25579440 ctggccac-catacctttggaaatttaggaactctagttt-atgttatgtttcaattacccctgagggagta 25579509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 28254246 - 28254167
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||| | ||||| ||||||||||||||||||||||||||| |||| || ||| ||||||||||||| ||||||||||    
T  28254246 gtaatttatctttagttaccatgagtaactaaatctttttagcctaggtttataaaatgaacctctattctgtttgttgg 28254167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 24188311 - 24188241
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt 131  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  24188311 gtaatttgtttttagttaccatgggtaactaaatcgttttaggctaggattctaagatgaacctctatttt 24188241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 20859752 - 20859687
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  20859752 gtaatttgtttttagttaccatgtgtaactaaatttttttaggttagagttctaagatgaacctct 20859687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 24164433 - 24164577
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggc 502  Q
    ||||||||||  |||||||||||||| ||| ||||| ||||||| ||| |||| ||| ||||||||  |   ||||   |||||||||||||||||||||    
T  24164433 gtaactagttattaattaaggaaacaagtgacttcatgacttaaatcagcccagtaattccattctcttcgaaccttggtaaggtagacgctgatagggc 24164532  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtactt 547  Q
    ||||| ||||||||| |||  ||| |||||||||  |||||||||    
T  24164533 tgcccatttgtagaagtactaagagggagagtgtgctatgtactt 24164577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 28665865 - 28665800
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||| |||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  28665865 gtaatttgattttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 28665800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 403 - 515
Target Start/End: Complemental strand, 26314387 - 26314273
Alignment:
Q  403 tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagg 500  Q
    |||||| ||||| ||||||||||||||| ||| |||||| |||||| |||  | |  ||||||||||| ||  |||||   |||||||||||||||||||    
T  26314387 tagtaagtagttagtaattaaggaaacaagtgacttcacaacttaaatcagtctagcaactccattctcctcgcaccttagtaaggtagacgctgatagg 26314288  T
Q  501 gctgcccgtttgtag 515  Q
    |||||||||||||||    
T  26314287 gctgcccgtttgtag 26314273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 860 - 938
Target Start/End: Complemental strand, 15470172 - 15470095
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgcaa 938  Q
    |||||||| |||||||||||||||||||||||||| |||| |||  ||||||||||| ||| ||||| |||||||||||    
T  15470172 aataaatagaggggattcaaagaatcctaaccgccgctaatattttgcaatcaaaattggt-aacttgctctgttgcaa 15470095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 16522568 - 16522633
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||| | |||||||||||||||||| |||| |||||||||||| |||||    
T  16522568 gtaatttgtttttagttaccacgtgtaactaaatctttttaggttagcgttctaagatgatcctct 16522633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 864 - 971
Target Start/End: Original strand, 24852041 - 24852150
Alignment:
Q  864 aatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgc-aaactttaa 961  Q
    |||| ||||||||||||||||||||||| |  ||| |||||  ||| ||||| ||||||  || ||||||||| |||||||||||||| | |||||||||    
T  24852041 aatagaggggattcaaagaatcctaaccactgctatcattctacaaccaaaacaggtaactttgctctgttgcaaacagattaactttccaaaactttaa 24852140  T
Q  962 acccttatct 971  Q
    ||||||||||    
T  24852141 acccttatct 24852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 20533187 - 20533300
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||| | ||||||||||||| ||| ||| ||||  |||| |||||||||||| ||||||||| |||||||| | ||| ||||||| |||||    
T  20533187 gtaatttgtcttttgttaccatgagtaacaaaaccttattagggtagg-ttctaagatgaatctctattttatttgttggattatt-ttaattt-aagtc 20533283  T
Q  161 ttttattcagttatttt 177  Q
    ||||||||| |||||||    
T  20533284 ttttattcatttatttt 20533300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 591 - 659
Target Start/End: Complemental strand, 26314242 - 26314174
Alignment:
Q  591 catacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
    ||||||||||||||||||||||| | ||||||| | ||||||||||| || |||||| |||||||||||    
T  26314242 catacctttggaaatttaggaacgccaatttaagtctatgtttcaatcactcctaagggagtaagaccc 26314174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 20314489 - 20314556
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    ||||||| ||||||| |||| || |||||||||||||||||| |||  ||||||||||||||||||||    
T  20314489 gtaatttttttttagttaccttgtgtaactaaatctttttaggttaaagttctaagatgaacctctat 20314556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 24261429 - 24261370
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    ||||||| ||||||||||||||||||||||||||  ||||||| || |||||||||||||    
T  24261429 tttttagttaccatgagtaactaaatctttttaggctagggttttatgatgaacctctat 24261370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 24321250 - 24321316
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaa-tctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||||||||| | ||||||| |||| ||||||||||||||||||    
T  24321250 gtaatttgtttttagttaccatgtgtaactaaattatttttaggttagagttctaagatgaacctct 24321316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 25921240 - 25921310
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt 131  Q
    ||||||||| ||||| ||||||||||||||||||| | | ||  |||||||||||||||||| ||||||||    
T  25921240 gtaatttgtctttagttaccatgagtaactaaatcctatcagggtagggttctaagatgaacttctatttt 25921310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 17433259 - 17433190
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| ||  ||| |||||||||||| ||||| |||| |||||||||| |||||||||||    
T  17433259 gtaatttgtttttagttatgatgtgtaactaaatctatttaggttagagttctaagataaacctctattt 17433190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 756 - 903
Target Start/End: Original strand, 17474405 - 17474553
Alignment:
Q  756 gtgcaacttgacagct-gattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattattt 854  Q
    |||||||||||||  | |||||||||||| |||| | ||  |||||||||||||||| |||||||||||||| |||||  || ||  |||||| ||| ||    
T  17474405 gtgcaacttgacaaatcgattaggttatcacgtcccgacggactcatcacttagataatctacttagaataactgaacgcgacttggctgttatttaatt 17474504  T
Q  855 ccaac-aataaatataggggattcaaagaatcctaaccgccactaacatt 903  Q
    ||||| ||| ||| | |||||||  |||||||||||||||  ||||||||    
T  17474505 ccaacaaatgaat-tgggggattataagaatcctaaccgctgctaacatt 17474553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 24162786 - 24162855
Alignment:
Q  77 taccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt 146  Q
    |||||||||||||||||||||||||| ||  ||||||||||| ||||| |||||  |||||||| |||||    
T  24162786 taccatgagtaactaaatctttttaggttgaggttctaagataaacctgtatttattttgttggataatt 24162855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 23388245 - 23388301
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaa 121  Q
    ||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||||||    
T  23388245 tttgtttttagttaccatgtgtaactgaatctttttaggttagagttctaagatgaa 23388301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 24659022 - 24659082
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaa 121  Q
    ||||||| ||||||| ||||||| || ||||||||||||||| |||| |||||||||||||    
T  24659022 gtaatttatttttagttaccatgtgttactaaatctttttaggttagagttctaagatgaa 24659082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 26252781 - 26252694
Alignment:
Q  152 tttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    |||||||||||| |||| |||||| ||| |  ||||||||  ||||| ||  |||||||||||||||||||||||||||||||| ||||    
T  26252781 tttaaagtcttt-attcggttattctctttatgctatttaactttaccgtcgtgcgtaagatttgtctcctctgaagcataaccctgat 26252694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 19052453 - 19052390
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| || |||| ||| |||||||||||||| |||| ||| ||||||||||||    
T  19052453 gtaatttgtttttagttatcatgtgtagctaaatctttttaggttagagttataagatgaacct 19052390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 842 - 904
Target Start/End: Original strand, 32417193 - 32417256
Alignment:
Q  842 ctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattc 904  Q
    |||||| ||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||    
T  32417193 ctgttacttaattccaacaagtaaatagaggggattcgaagaatcctaaccaccactaacattc 32417256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 17336956 - 17337026
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatttt 131  Q
    ||||||||||||||| |||| ||| |||||||| | | ||||  |||||||||||||| ||||||||||||    
T  17336956 gtaatttgtttttagttaccttgaataactaaaccctattagggtagggttctaagataaacctctatttt 17337026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 772 - 826
Target Start/End: Original strand, 24167361 - 24167415
Alignment:
Q  772 gattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataa 826  Q
    ||||||||||   |||| ||||| |||||||||||||||||||||||||||||||    
T  24167361 gattaggttactacgtcccaacagactcatcacttagatagtctacttagaataa 24167415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 861 - 915
Target Start/End: Complemental strand, 26307845 - 26307791
Alignment:
Q  861 ataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaa 915  Q
    ||||||| | ||||||||||| |||||||||||| ||||||||| ||||||||||    
T  26307845 ataaatagatgggattcaaagtatcctaaccgccgctaacattctgcaatcaaaa 26307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 862 - 923
Target Start/End: Complemental strand, 15544281 - 15544220
Alignment:
Q  862 taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaa 923  Q
    |||||| ||||||||| | |||||||||| ||| ||||||||  ||||||||||||||||||    
T  15544281 taaatagaggggattcgaggaatcctaactgccgctaacattttgcaatcaaaataggtaaa 15544220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 18807721 - 18807613
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtct 161  Q
    |||||||||| ||| |||||||| || ||||||| |  |   ||||||||||||||||||||||||  ||||||||||| | |  |||||||| ||||||    
T  18807721 taatttgtttataggtaccatgattacctaaatcatcattttttagggttctaagatgaacctcta--ttgtttgttggatca-aattaattt-aagtct 18807626  T
Q  162 tttattcagttat 174  Q
    |||||||||||||    
T  18807625 tttattcagttat 18807613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 25401451 - 25401520
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| | ||||   ||||||| ||||||||| ||||  |||||||||||||||||||||    
T  25401451 gtaatttgtttttagtttccatatctaactaattctttttaggttagatttctaagatgaacctctattt 25401520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 756 - 832
Target Start/End: Complemental strand, 26314059 - 26313982
Alignment:
Q  756 gtgcaacttgacag-ctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaac 832  Q
    |||||||||||||  | |||||||||||| ||||   || ||||||||||||||| |||||||||| |||||||||||    
T  26314059 gtgcaacttgacaaaccgattaggttatcacgtcttgacgaactcatcacttagacagtctacttaaaataattgaac 26313982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 862 - 927
Target Start/End: Original strand, 29263449 - 29263514
Alignment:
Q  862 taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt 927  Q
    |||||| ||||||||| ||||||||||||| || ||||||||   ||||||||| |||||||||||    
T  29263449 taaatagaggggattcgaagaatcctaaccaccgctaacattatacaatcaaaagaggtaaacttt 29263514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 506 - 585
Target Start/End: Original strand, 17337308 - 17337388
Alignment:
Q  506 ccgtttgtagaactaccgagaaggagagtgtatt-atgtacttctaaaattcatagacaatggaacctttaggaacattgg 585  Q
    ||||||||||||||||||||| || |||| | || |||||||||||| ||| |||||  | ||||||||||||| ||||||    
T  17337308 ccgtttgtagaactaccgagagggggagtatgttgatgtacttctaagattgatagatgagggaacctttaggaccattgg 17337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 18831570 - 18831438
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaa-gtctttt 164  Q
    |||| ||||| ||| ||| ||||||||||  || ||| |||| ||||||||||||||   | |||  |||||||| |||||||| | ||| | ||| |||    
T  18831570 ttgtctttagttacgatgtgtaactaaatagttataggttagagttctaagatgaactcttgtttattttgttggataattatttaattacatgtcgttt 18831471  T
Q  165 attcagttattttctattcgctatttagtttta 197  Q
    ||| ||||||||| | |||||||||||||||||    
T  18831470 atttagttattttttgttcgctatttagtttta 18831438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 18938930 - 18938799
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaa-gtctttt 164  Q
    |||| ||||| ||||||| |||||||| |  || ||| || | |||| |||| ||||||||||||  |||||||| |||||||| | ||| | ||| |||    
T  18938930 ttgtctttagttaccatgtgtaactaagtagttataggttggagttccaagaggaacctctattta-tttgttggataattatttaattatatgtcgttt 18938832  T
Q  165 attcagttattttctattcgctatttagtttta 197  Q
    ||| ||||||||||| || ||||||||||||||    
T  18938831 atttagttattttctgttagctatttagtttta 18938799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 19007552 - 19007616
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||||| |||||||  ||||||||| ||||||| |||  ||||||||||| ||||||    
T  19007552 taatttgtttttagataccatgtataactaaatatttttaggttactgttctaagatggacctct 19007616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 883 - 981
Target Start/End: Original strand, 19086067 - 19086167
Alignment:
Q  883 atcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgcaa-cagattaactttgcaaa-ctttaaacccttatctctttattta 980  Q
    ||||||||| || ||||||||| |||||||| | | ||||  || ||||||||||| || |||||| || |||| || ||||||||||||||||||||||    
T  19086067 atcctaaccaccgctaacattctgcaatcaagacaagtaactttgctctgttgcaaacaaattaacattccaaaactctaaacccttatctctttattta 19086166  T
Q  981 t 981  Q
    |    
T  19086167 t 19086167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 23013754 - 23013831
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| ||| |||| | |  |||||||||||||||| | |||| ||||||||    
T  23013754 gtaatttgtctttagttaccatgagtaactaaaccttattaggtaa--gttctaagatgaacctatgttttatttgttgg 23013831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 522
Target Start/End: Original strand, 24264932 - 24264972
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  24264932 taaggtagacgctgatagggatgtccgtttgtagaactacc 24264972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 522
Target Start/End: Original strand, 24341563 - 24341603
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  24341563 taaggtagacgctgatagggatgtccgtttgtagaactacc 24341603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 17470527 - 17470578
Alignment:
Q  272 ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaa 323  Q
    |||||||||||||||||||| | |||||||||||| ||||| | ||||||||    
T  17470527 ttgatatttatatatgtctatctaggaagtaattatttagtaactagcgaaa 17470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 826
Target Start/End: Complemental strand, 17635617 - 17635546
Alignment:
Q  756 gtgcaacttgacag-ctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataa 826  Q
    |||||||||||||  |||||||||||| | |||  | ||  |||||||||||||||||||||||||||||||    
T  17635617 gtgcaacttgacaaactgattaggttaccacgtaccgacggactcatcacttagatagtctacttagaataa 17635546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 18514196 - 18514255
Alignment:
Q  109 gttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttatt 167  Q
    ||||||||||||||||||||||  |||||||| |||||| ||||||||| ||| ||||||    
T  18514196 gttctaagatgaacctctatttgttttgttggataattatttaatttaatgtcgtttatt 18514255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 521
Target Start/End: Original strand, 25401798 - 25401837
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  25401798 taaggtagacgctgatagggctgtccgtttttagaactac 25401837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 860 - 915
Target Start/End: Original strand, 27921259 - 27921314
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaa 915  Q
    |||||||| ||||||||| ||||||||||||| |  ||||||||| ||||||||||    
T  27921259 aataaataaaggggattcgaagaatcctaacctctgctaacattctgcaatcaaaa 27921314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 19762209 - 19762243
Alignment:
Q  6 cagttcaagaggaaggcaagcactagaagcttcaa 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  19762209 cagttcaagaggaaggcaagcactaggagcttcaa 19762243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 639
Target Start/End: Original strand, 17337385 - 17337426
Alignment:
Q  598 ttggaaatttaggaactctaatttaattttatgtttcaatta 639  Q
    |||||||||||||||||||||||||| | |||| ||||||||    
T  17337385 ttggaaatttaggaactctaatttaagtatatgcttcaatta 17337426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 603 - 660
Target Start/End: Complemental strand, 23265637 - 23265580
Alignment:
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||| ||||||||| |  |||||||||||||| ||||| || |||||||||    
T  23265637 aatttaggaacgctaatttaaatccatgtttcaattaccactaagagaataagacccc 23265580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 24264488 - 24264557
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||| |||||||||| ||| ||   |||||||||||||||||||||| |||  |||||||| ||||||||    
T  24264488 catgtgtaactaaatatttatatgctagggttctaagatgaacctctgtttgttttgttggataattatt 24264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 24341118 - 24341187
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||| |||||||||| ||| ||   |||||||||||||||||||||| |||  |||||||| ||||||||    
T  24341118 catgtgtaactaaatatttatatgctagggttctaagatgaacctctgtttgttttgttggataattatt 24341187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 34131460 - 34131395
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||  ||||||  |||||||||   |||||| |||| ||||||||||||||||||    
T  34131460 gtaatttgtttttaattaccatatgtaactaaaaaattttagtttagagttctaagatgaacctct 34131395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 243; Significance: 1e-134; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 61 - 694
Target Start/End: Complemental strand, 27420424 - 27419784
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    |||||||||| |||| ||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||  ||||||    
T  27420424 gtaatttgttattagttaccatgggtaactaaatatttttagcctagggttctaagatgaacctct-ttttgtttgttggataattatttaaaataaagt 27420326  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacact--tatgtagt 257  Q
     |||| ||||| |||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||| |||||||| ||||  ||||| ||    
T  27420325 gttttgttcagctattttctgttcgctatttagttttattatagtgcgtaagatttgtctcctctgaagcataaccctgatttaggcactaatatgt-gt 27420227  T
Q  258 gacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagta 356  Q
    ||||    ||||||||||||||||||| | ||||||||||||||||||||||||| | ||| |||||||  ||||||| ||| || |||| |||||||||    
T  27420226 gacatggtctaatattgatatttatatctatctaaccaggaagtaattaattagtaactagagaaacaacctgaaagctagcgtaccctgttagtaagta 27420127  T
Q  357 ctcaggggtgtgacatatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaa 453  Q
    || ||||  || ||||| |||||||||||||| ||||  | ||||    || ||||||||| ||||||||||||||| ||| ||| ||||||||| | |     
T  27420126 cttagggaggttacatacctaatattgatgaaaatctgctgaaatcaggtaataactagttagtaattaaggaaacaggtgactttacgacttaaatgag 27420027  T
Q  454 cccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaa 551  Q
    ||||  ||||||||| ||||||||||    ||||||||||||  |||||| |  ||||||||| |||||| |||| | ||| ||| ||||||| ||||||    
T  27420026 cccaaaaactccattattctttcaccctggtaaggtagacgcgaatagggataaccgtttgtacaactactgagaggaagaatgtgttatgtatttctaa 27419927  T
Q  552 aattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgag 651  Q
     |||||||||  | ||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  27419926 gattcatagatgagggaacatttagaaacactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctgtgcgag 27419827  T
Q  652 taagacccctacgaaccgtcatgtggatcagcaggtgcaactc 694  Q
    ||||||| | ||||||| ||||||||||||  | |||||||||    
T  27419826 taagacctccacgaaccttcatgtggatcaatatgtgcaactc 27419784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 61 - 694
Target Start/End: Complemental strand, 27419278 - 27418638
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    |||||||||| |||| ||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||| |||||||| ||  ||||||    
T  27419278 gtaatttgttattagttaccatgggtaactaaatatttttagcctagggttctaagatgaacctcc-ttttgtttgttggataattatttaaaataaagt 27419180  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacact--tatgtagt 257  Q
     |||| ||||| ||||||||  |||||||||||||||| | || |||||||||||||| ||||||||||||||||| |||||||| ||||  ||||| ||    
T  27419179 gttttgttcagctattttctgctcgctatttagttttattatagtgcgtaagatttgtttcctctgaagcataaccctgatttaggcactaatatgt-gt 27419081  T
Q  258 gacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagta 356  Q
    ||||    ||||||||||||||||||| | ||||||||||||||||||||||||| | ||| |||||||  ||||||| ||| || |||| |||||||||    
T  27419080 gacatggtctaatattgatatttatatctatctaaccaggaagtaattaattagtaactagagaaacaacctgaaagctagcgtaccctgttagtaagta 27418981  T
Q  357 ctcaggggtgtgacatatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaa 453  Q
    || ||||  || ||||| |||||||||||||| ||||  | ||||    || ||||||||| ||||||||||||||| ||| ||| ||||||||| | |     
T  27418980 cttagggaggttacatacctaatattgatgaaaatctgctgaaatcaggtaataactagttagtaattaaggaaacaggtgactttacgacttaaatgag 27418881  T
Q  454 cccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaa 551  Q
    ||||  ||||||||| ||||||||||    |||||||||||| ||||||| |  ||||||||| |||||| |||| | ||| ||| ||||||| ||||||    
T  27418880 cccaaaaactccattattctttcaccctggtaaggtagacgcggatagggataaccgtttgtacaactactgagaggaagaatgtgttatgtatttctaa 27418781  T
Q  552 aattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgag 651  Q
     |||||||||  | ||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  27418780 gattcatagatgagggaacatttagaaacactaggaagtcatacctttggaaatttaggaactctaatttaagtttatgtttcaattacccctgtgcgag 27418681  T
Q  652 taagacccctacgaaccgtcatgtggatcagcaggtgcaactc 694  Q
    ||||||||| ||||||| ||||||||||||  | |||||||||    
T  27418680 taagacccccacgaaccttcatgtggatcaatatgtgcaactc 27418638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 131 - 825
Target Start/End: Complemental strand, 25940117 - 25939405
Alignment:
Q  131 tgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagc 229  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||| | || | ||||||||| |||||||||||||||||||||||||||||||||     
T  25940117 tgtttgttggataactatttaatttaaagtcttttattcagttattttttgtttgttatttagttatactgtaatgcgtaagatttgtctcctctgaagt 25940018  T
Q  230 ataaccttgatttagacacttatgtag-tgacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaat 328  Q
    |||| |  || ||||||||||| | || ||||| | |||||||||||| |  |||||||| |||  ||||||||||| |||||| | ||||||||||||     
T  25940017 ataatccggaattagacacttagggaggtgacata-cctaatattgatgt--atatatgtgtaattaggaagtaattgattagtaactagcgaaacaaac 25939921  T
Q  329 tgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaag 424  Q
     ||||| |||| || ||||| |||||||| | ||||  |||| ||| |||||||||||| ||||||||| |||     |||||| ||||| |||||||||    
T  25939920 cgaaagtgagcgtaccctgagagtaagtaattagggtggtgatatacctaatattgatgcatatctattgaaaccaggtagtaattagttagtaattaag 25939821  T
Q  425 gaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    |||||||||| ||||| ||||||| | |  ||| ||| |||||||| |||||||||   ||||||||||||||||||| || ||||||||||||||||||    
T  25939820 gaaacatgtgacttcatgacttaaataagtccagtaattccattctcctttcaccttggtaaggtagacgctgataggtctccccgtttgtagaactacc 25939721  T
Q  523 gagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaattta 622  Q
    |||| |||||||||  ||||| ||| ||| |||||||||  | |||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||    
T  25939720 gagagggagagtgttctatgttcttttaagattcatagatgagggaacctttaggaacattgggaggccatacctttggaaatttaggaatgctaattta 25939621  T
Q  623 attttatgtttcaattacccctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagaccta-atcta 721  Q
    | |||||||||||||||||  | || |||||||||||| || |||  |||  |||||||||||||| ||||| | ||||||||| ||| ||||| |||||    
T  25939620 agtttatgtttcaattacctttgagtgagtaagacccccacaaactatcacatggatcagcaggtgtaactcgacaggcggaggtataaacctacatcta 25939521  T
Q  722 taagagagtaagacccccgcatgtaaggatcat-------------tgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttag 808  Q
    | |||||||||||  ||| || |||||||||||             ||||||||||||| | ||||||||||||| |||| |||| ||||||||||||||    
T  25939520 tgagagagtaaga-acccacaagtaaggatcatcgtgtaaccaacatgtgcaacttgacggttgattaggttatcacgtcccaacgaactcatcacttag 25939422  T
Q  809 atagtctacttagaata 825  Q
    ||||||||| |||||||    
T  25939421 atagtctacgtagaata 25939405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 61 - 904
Target Start/End: Complemental strand, 26292137 - 26291258
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||||| |||||||||||||||||| |||||||   || |||||||||||||||| ||||||||||||| | |||||||| |||| ||| |    
T  26292137 gtaatttgtctttagttaccatgagtaactaaatatttttaggccagagttctaagatgaacctttattttgtttgttagataattatttaattcaaatt 26292038  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||| ||||||||| | ||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||| || ||| |||||||    
T  26292037 cgtttatttagttattttatgttcgtcatttagttttactgtagtgagtaagatttgcctcttctgaagcataaccctgatttaggcatttaggtagtga 26291938  T
Q  260 cagatcctaatattgatatt----------tatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgat 348  Q
    ||   |||||||||||||||          ||| ||| | |  ||| |||||||||| ||||| | |||| |||||||   ||||| ||| || ||||||    
T  26291937 cattacctaatattgatattcttatcttgatatttatatatgtccaagaagtaattagttagtaactagcaaaacaaaccaaaagcaagcgtaccctgat 26291838  T
Q  349 agtaagtactcaggggtgtgacatatctaatattgatgaatatctattta---aatatagtaactagttggtaattaaggaaacatgtgccttcacgact 445  Q
    |||||||||| ||||  |||||||| ||||||||||| || || |  | |    || |||||| ||||| ||||||||||||||| ||| ||||||||||    
T  26291837 agtaagtacttagggaggtgacatacctaatattgataaacatttgctgacatcatgtagtaattagttagtaattaaggaaacaagtgacttcacgact 26291738  T
Q  446 taactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgt 543  Q
    ||| ||| |||| |||||||||||| ||  ||| |   ||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  26291737 taaatcagcccaataactccattctcctcacactttggtaaggtagacgctcatagggctgtcagtttgtaaaactaccgagaaggagagtgtgttatgt 26291638  T
Q  544 acttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccc 643  Q
    |||||||| |||||||||  |  ||||||||||||||| ||   |  ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26291637 acttctaagattcatagatgagagaacctttaggaacactgacca-ccatacctttggaaatttaggaactctaatttaagtttatgttttaattacccc 26291539  T
Q  644 taagcgagtaagacccc-----tacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagacc-taatctat-aagagagtaagacc 736  Q
    ||||  |||||||||||     || | | |   |||| || || || ||||||||||| |||||||||||||||||  |||| ||  ||||||||||| |    
T  26291538 taaggtagtaagaccccacacgtaaggatcactatgt-gaccaacatgtgcaactcaacaggcggagggatagaccaaaatcgatcgagagagtaaga-c 26291441  T
Q  737 cccgcatgtaaggatcattgtgca-------------acttgac-agctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttaga 822  Q
    || ||||||||||||||  |||||             ||||||| | |||| || |||||| |||| | || |||||||||||||||||||||||||| |    
T  26291440 cctgcatgtaaggatcaccgtgcagccaacaagtgcgacttgacaaactgactaagttatcgcgtcccgacgaactcatcacttagatagtctacttaaa 26291341  T
Q  823 ataattgaacttgaattttctgttaatt-atttccaacaataaatataggggattcaaagaatcctaaccgccactaacattc 904  Q
    | |||||||| ||| ||  ||||||||| ||||| |  ||| |||| |||||||||||| |||| ||||| |||||| |||||    
T  26291340 aaaattgaacgtgacttgactgttaattaatttcaataaattaatagaggggattcaaaaaatcttaaccaccactatcattc 26291258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 61 - 561
Target Start/End: Original strand, 45620950 - 45621467
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||||||||| || |||  ||||| |||| |||||||  ||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||    
T  45620950 gtaatttgtttttagttaacataggtaaccaaatttttttaggctagggttctaagatgaacctctaatttatttgttggataattatttaatttaaagt 45621049  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||| |||||||||   ||||||||||||||||| |||| ||||||||||||||||||| || |||| |||| |||||||| |||||| |||||||    
T  45621050 cgtttatttagttatttttagttcgctatttagttttattgtagtgcgtaagatttgtctcctatggagcacaaccctgatttaggcactta-gtagtga 45621148  T
Q  260 cagatcctaatattgata--------tttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag-ctatcctgatag 350  Q
    ||   |||||||||||||        || |||| |||||||||| |||||||||| ||||| | |||||| |||||  |||| ||||  || ||| ||||    
T  45621149 catggcctaatattgataattatatcttgatatttgtctaaccatgaagtaattagttagtaactagcgatacaaaccgaaaacgagtgtaccctaatag 45621248  T
Q  351 taagtactcaggggtgtgacatatctaatattgatgaatatctatttaaat-at------agtaactagttggtaattaaggaaacatgtgccttcacga 443  Q
    |||||||| ||| | |||||| | |||||||||||| | ||||  | |||| ||      ||||||||||| ||||||||||||||| ||  ||||||||    
T  45621249 taagtacttaggag-gtgacacaactaatattgatgcaaatctgctgaaatcatgtagtaagtaactagttagtaattaaggaaacaagttacttcacga 45621347  T
Q  444 cttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattat 541  Q
    ||||| ||| || ||||||| |||||| ||  |||||   ||||||||||| |||||||| || ||||||||||||||||| ||| | ||| ||| ||||    
T  45621348 cttaaatcagcctactaacttcattctcctcgcaccttggtaaggtagacgttgatagggttgtccgtttgtagaactaccaagaggaagattgtcttat 45621447  T
Q  542 gtacttctaaaattcataga 561  Q
    ||||||||||  ||||||||    
T  45621448 gtacttctaaggttcataga 45621467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 62 - 279
Target Start/End: Complemental strand, 17181335 - 17181117
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtc 160  Q
    |||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||||||||| |     
T  17181335 taatttgtctttagttaccatgagtaactcaatctttttaggttagggttctaagatgtacctctattttgtttgttggataattatttaatttaaaatt 17181236  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgac 260  Q
     |||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||||| ||| |||||  |||||||| || ||| ||||||||    
T  17181235 gtttattcaattattttctgttcgctatatagttttattgtagtgcgtaagatttgtctcctctaaagaataactctgatttaggcatttaagtagtgac 17181136  T
Q  261 agatcctaatattgatatt 279  Q
    ||  ||||||| |||||||    
T  17181135 agggcctaatactgatatt 17181117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 405 - 658
Target Start/End: Complemental strand, 45553837 - 45553583
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    |||||||||| ||||||||||||||| ||| ||||| ||||||| ||| | || |||||||||||| ||  |||||   |||||||| ||||||||||||    
T  45553837 gtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcagcacagtaactccattctcctcacaccttggtaaggtagtcgctgatagggc 45553738  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttgga 602  Q
    ||||| |||||||||||||| ||| | ||||||| ||||| ||| |||| |||||||||      |||||||||||||| |||  |  ||||||||||||    
T  45553737 tgcccatttgtagaactaccaagaggaagagtgtgttatgcactcctaagattcatagatgggaaaacctttaggaacactggcca-ccatacctttgga 45553639  T
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacc 658  Q
    ||||||||||| |    |||| ||||||||||||||||| || || ||||||||||    
T  45553638 aatttaggaacgccgtattaagtttatgtttcaattacctctgagggagtaagacc 45553583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 120 - 312
Target Start/End: Original strand, 21070695 - 21070887
Alignment:
Q  120 aacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtc 218  Q
    |||||||||||  |||| ||| |||||||| |||||||  || ||| |||||||||||||| ||| |||||||||||||||||| | |||||||||||||    
T  21070695 aacctctattta-tttgatggataattatttaatttaatttcgtttgttcagttattttctgttcactatttagttttactgtagtccgtaagatttgtc 21070793  T
Q  219 tcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagt 312  Q
    ||||||  |||  |||| |  |||||||||||| ||||||||||  |||||||||||||||||||||||||||   | ||||| ||||||||||    
T  21070794 tcctctagagcgcaaccctagtttagacacttaggtagtgacagtgcctaatattgatatttatatatgtctatataagaagttattaattagt 21070887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 8502177 - 8502356
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| ||||||| ||| ||||||||| ||||  ||||||||||||||||||||||||| | |||||||| || ||| ||||||||||||    
T  8502177 gtaatttgtctttagttaccatgggtagctaaatcttgttaggctagggttctaagatgaacctctattctatttgttggatatttatttaatttaaagt 8502276  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    | |||||||||||||||  |      |||||| ||||||| || |||||||||||||||||||||||||||||||| ||||    
T  8502277 c-tttattcagttatttcttgaattttatttaattttactatagtgcgtaagatttgtctcctctgaagcataaccatgat 8502356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 61 - 306
Target Start/End: Complemental strand, 20175240 - 20174999
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt-attaatttaaagt 159  Q
    ||||||||| ||||| ||||||| ||| ||||||||||||||  |||||||||||||||||| |||||||  |||||| | |||||  ||||||||| ||    
T  20175240 gtaatttgtctttagttaccatgtgtagctaaatctttttaggctagggttctaagatgaacgtctatttattttgtttgataattgtttaatttaatgt 20175141  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||| ||||||||| | ||| ||||||||||||| | |     || |||||| | |||| || |||| ||| ||  ||||| |||||  |||||||    
T  20175140 cgtttatttagttattttatgttcactatttagttttattat-----gttagatttatttcctttggagcacaacattactttaggcacttcggtagtga 20175046  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaatta 306  Q
    || | |||||||||||||||||||| |||||| | ||||||||||||    
T  20175045 catagcctaatattgatatttatatctgtctatctaggaagtaatta 20174999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 795 - 938
Target Start/End: Original strand, 45621681 - 45621825
Alignment:
Q  795 aactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgc 893  Q
    ||||| ||||||||||||||||||| |||||||||||  ||| ||  |||||||||| ||||||||| | |||| ||||||||||||||||| |||||||    
T  45621681 aactcttcacttagatagtctacttggaataattgaatgtgacttgactgttaattaattccaacaaatgaatagaggggattcaaagaatcttaaccgc 45621780  T
Q  894 cactaacattccgcaatcaaaataggtaaactttctctgttgcaa 938  Q
    | ||||||||| |||||||||| | |||||||| || ||||||||    
T  45621781 cgctaacattctgcaatcaaaacaagtaaacttgctatgttgcaa 45621825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 26652364 - 26652452
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||| ||||| ||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||| ||||||||    
T  26652364 gtaatttgtctttagttaccatgagtaactaaatctttttaggctagggttttaagataaacctctattttgtttgttggataattatt 26652452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 34368752 - 34368593
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||||||||| ||||||||||||||||| ||||||||  |||  ||||||||| |||||||||| |||||| ||| | ||  |||||||||| ||    
T  34368752 gtaatttgtttttagttaccatgagtaactaaacctttttaggctagaattctaagataaacctctattatgtttgctggattat--ttaatttaaattc 34368655  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctga 226  Q
     ||||||||||||||||| | || ||||||| ||||||  || |||||||||||||||| ||||||    
T  34368654 -tttattcagttattttcgaatc-ctatttaattttac--tattgcgtaagatttgtcttctctga 34368593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 29144007 - 29143942
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  29144007 gtaatttgtttttagttaccatgtgtaactaaatctttttagcttagagttctaagatgaacctct 29143942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 25348969 - 25348878
Alignment:
Q  148 ttaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    ||||||||||||||| | |||| ||||||||| |  ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  25348969 ttaatttaaagtcttat-ttcaattattttctttaagctatttagttctactgtcatgcgtaagatttgtctcctcttaagcataaccttgat 25348878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 41789767 - 41789882
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| |||||  | ||| ||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||    
T  41789767 gtaatttgtctttagtcatcattagtaactaaatttttttaggctagggttctaagatgaacctcaattttgtttgttggatatttatttaatttaaagt 41789866  T
Q  160 cttttattcagttattt 176  Q
    | || ||||||||||||    
T  41789867 c-ttgattcagttattt 41789882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 17891057 - 17890930
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattca 169  Q
    ||||| |||||||||||||||||| |||||||  | ||||||||||||||||||| ||||  ||||||||  || || ||||||||| ||| ||||||      
T  17891057 tttagttaccatgagtaactaaatatttttaggctggggttctaagatgaacctcaatttattttgttggaaaagtatttaatttaatgtcgtttatttg 17890958  T
Q  170 gttattttctattcgctatttagtttta 197  Q
    |||||||||| ||||||||||| |||||    
T  17890957 gttattttcttttcgctatttaatttta 17890930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 796 - 922
Target Start/End: Complemental strand, 45553426 - 45553300
Alignment:
Q  796 actcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgcc 894  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||  ||||||| || ||||||| ||| ||||  ||||||||||||||||||||||||     
T  45553426 actcatcacttagataatctacttagaataattgaacgtgatttgactgttaaataattccaacaaatgaata-gggggattcaaagaatcctaaccgct 45553328  T
Q  895 actaacattccgcaatcaaaataggtaa 922  Q
     ||||| ||| |||| ||||| ||||||    
T  45553327 gctaacgttctgcaaccaaaacaggtaa 45553300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 19199632 - 19199686
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  19199632 taaggtagacgctgatagggctgcccatttgtagaactactgagaaggagagtgt 19199686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 25348677 - 25348568
Alignment:
Q  436 cttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagag 533  Q
    ||||||||||||| ||| |||| ||||| |||||| ||   ||||   |||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  25348677 cttcacgacttaaatcagcccagtaacttcattctcctcgaacctcggtaaggtagacgctgatagggctgctcgtttgtagaactactgagagggagag 25348578  T
Q  534 tgtattatgt 543  Q
    ||| ||||||    
T  25348577 tgtgttatgt 25348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 25886893 - 25886959
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctcta 127  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| |||||||||||||||||||    
T  25886893 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctcta 25886959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 133 - 281
Target Start/End: Original strand, 16075535 - 16075684
Alignment:
Q  133 tttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcat 231  Q
    ||||||||||||||||| ||||||  ||  |||||||| ||||||| | ||||||||||| ||||||| || ||||||| |||||| ||||||| ||       
T  16075535 tttgttgggtaattatttaatttattgttgtttattcaattattttatgttcgctatttaattttactatagtgcgtaatatttgtttcctctggagggc 16075634  T
Q  232 aaccttgatttagacacttatgtagtgacagatcctaatattgatattta 281  Q
    |||  |||||||| || ||| ||||||||| | ||||||||||| |||||    
T  16075635 aactctgatttaggcatttaggtagtgacaaaacctaatattgaaattta 16075684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 17629410 - 17629475
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||    
T  17629410 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagaattctaagatgaacctct 17629475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 17674702 - 17674767
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||    
T  17674702 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagaattctaagatgaacctct 17674767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 20171630 - 20171699
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| |||| || |||||||| ||||||||| |||| ||||||||||||||||||||||    
T  20171630 gtaatttgtttttagttaccctgtgtaactaattctttttaggttagagttctaagatgaacctctattt 20171699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 591 - 660
Target Start/End: Original strand, 21078202 - 21078271
Alignment:
Q  591 catacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||||||||||||||| | || |||| ||||||||||||||||||| ||| ||||||||||||    
T  21078202 catacctttggaaatttaggaacacaaacttaagtttatgtttcaattaccccaaagggagtaagacccc 21078271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 24089917 - 24089982
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  24089917 gtaatttatttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 24089982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 27908167 - 27908232
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||| ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  27908167 gtaatttgtctttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 27908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 17350457 - 17350393
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  17350457 taatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctct 17350393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 32439374 - 32439434
Alignment:
Q  77 taccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgt 137  Q
    |||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  32439374 taccattagtaactaaatctttttaggccagggttctaagatgaacctctattttgtttgt 32439434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 18933216 - 18933141
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||| ||||| ||||||| ||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  18933216 tttgtctttagttaccatgggtaactaaagcctattagggtagggttctaagatgaacctctattttgtttgttgg 18933141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 404 - 536
Target Start/End: Original strand, 21072158 - 21072292
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||| |||||| |||||||| ||| ||||| ||||||| ||| || | |||||||||||| ||   ||||   ||||||||| | ||||||||    
T  21072158 agtaactagttagtaattgaggaaacaagtgacttcatgacttaaatcagcctagtaactccattctcctcatacctcggtaaggtagatgatgataggg 21072257  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||  |||| ||||||||||||||||| |||||||    
T  21072258 ctggtcgttagtagaactaccgagaagcagagtgt 21072292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 30682898 - 30682977
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||  ||| ||| |||||| ||| |||||||||||||||||    
T  30682898 gtaatttgtctttagttaccatgagtaactaaacctttttaggctagagttttaagattaacttctattttgtttgttgg 30682977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 25531606 - 25531544
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||| ||||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  25531606 atttgtttttagttaccatgtgtaactaaatctatttaggttagagttctaagatgaacctct 25531544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 404 - 526
Target Start/End: Original strand, 8502523 - 8502647
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||| ||||| ||| ||||||||| ||||||||||||| |||| ||| ||||| |||||| |   |||||   ||||||||||  |||| |||    
T  8502523 agtaactagttagtaatcaagaaaacatgtgacttcacgacttaaatcaatccattaacttcattctccgcacaccttgttaaggtagacattgattggg 8502622  T
Q  502 ctgcccgtttgtagaactaccgaga 526  Q
     || |||||||||||||||||||||    
T  8502623 ttgtccgtttgtagaactaccgaga 8502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 25536955 - 25536890
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||  |||||||||||| ||||| |||| ||||||||||||||||||    
T  25536955 gtaatttgtttttagttaccatatgtaactaaatctatttaggttagagttctaagatgaacctct 25536890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 25921931 - 25921866
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| || |||||||||||||||  ||| ||||||||||||||||||    
T  25921931 gtaatttgtttttagttaccatgtgttactaaatctttttaggatagtgttctaagatgaacctct 25921866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 27870685 - 27870574
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||| | |||||| ||||||||||  |||||||| |||| |||||||||||||||||||||  |||||||| | ||  ||||||| |||||    
T  27870685 gtaatttgtctttggttaccattagtaactaaacgtttttagcctaggattctaagatgaacctctatttattttgttggatgat--ttaattt-aagtc 27870589  T
Q  161 ttttattcagttattt 176  Q
     |||||||||||||||    
T  27870588 -tttattcagttattt 27870574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 12556832 - 12556911
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||  | |||||||||||||||| |||||||| ||||||||    
T  12556832 gtaatttgtctttagttaccatgagtaactaaaccctattagggtggggttctaagatgaacttctattttatttgttgg 12556911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 405 - 541
Target Start/End: Original strand, 16075830 - 16075968
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    |||||||||| ||||||||||||||| ||  |||||||||||||   | |||| |||||| ||||| ||  |||||   | |||||||| |||||||||     
T  16075830 gtaactagttagtaattaaggaaacaagtaacttcacgacttaaaatagcccagtaactcaattctcctcgcaccttggtgaggtagacactgataggga 16075929  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattat 541  Q
    |  | ||||||||||||||||||| ||||||||| ||||    
T  16075930 tatctgtttgtagaactaccgagagggagagtgtgttat 16075968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 17198958 - 17198903
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaa 121  Q
    |||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||    
T  17198958 ttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaa 17198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 483 - 542
Target Start/End: Complemental strand, 17890629 - 17890570
Alignment:
Q  483 aaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatg 542  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||||||||||||| |||||    
T  17890629 aaggtagacgctgatatggcttcccgtctgtagaattaccgagaaggagagtgtgttatg 17890570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 482 - 521
Target Start/End: Complemental strand, 22568235 - 22568196
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22568235 taaggtagacgctgatagggctgcccgtttgtagaactac 22568196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 25937993 - 25937915
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| || || ||  ||||||| ||||||||||||||||||| ||||||||    
T  25937993 gtaatttgtctttagttaccatgagtaactaaacctatt-agggtagggttataagatgaacctctattttatttgttgg 25937915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 311
Target Start/End: Complemental strand, 45554041 - 45553934
Alignment:
Q  204 tgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatgtctaaccaggaagtaa 303  Q
    |||||||||||||||||||||| |||  |||| |  || || |||||| |||||||||   |||||||||||||||||||||||| || | |  ||||||    
T  45554041 tgcgtaagatttgtctcctctggagcgcaaccctagttaaggcacttaggtagtgacaatgcctaatattgatatttatatatgtatatctacaaagtaa 45553942  T
Q  304 ttaattag 311  Q
    ||||||||    
T  45553941 ttaattag 45553934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 922
Target Start/End: Complemental strand, 27869927 - 27869869
Alignment:
Q  864 aatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaa 922  Q
    |||| |||||||||||||||| ||||||||| ||||||||| |||||||||||| ||||    
T  27869927 aatagaggggattcaaagaattctaaccgccgctaacattctgcaatcaaaataagtaa 27869869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 28929743 - 28929637
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatc-tttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||| ||||||| |||||||| || ||||||| |||| |||||||||||||||||| ||| | |||||||| || ||| ||||||||| ||    
T  28929743 aatttgtttttagttaccatgtgtaactaattcttttttaggttagagttctaagatgaacctctgtttatttttgttggatatttatttaatttaacgt 28929644  T
Q  160 cttttat 166  Q
    | |||||    
T  28929643 cgtttat 28929637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 15340350 - 15340285
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||| |||||||   |||| ||||||||||||||||||    
T  15340350 gtaatttgtttttagttaccatgtgtaactaactctttttcagttagagttctaagatgaacctct 15340285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22378529 - 22378590
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    ||||||||||||||| ||||||| |||||| ||||||||||| |||  ||||||||||||||    
T  22378529 gtaatttgtttttagttaccatgtgtaacttaatctttttaggttacagttctaagatgaac 22378590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 12950145 - 12950252
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||  ||| ||| |||||||| ||||||||| |||| ||||| |||||||||||| ||| | |||||||| || ||| ||||||||| |    
T  12950145 gtaatttgtttttaattacgatgtgtaactaattctttttaggttagagttctgagatgaacctctgtttatttttgttggatatttatttaatttaatg 12950244  T
Q  159 tcttttat 166  Q
    || |||||    
T  12950245 tcgtttat 12950252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 18552599 - 18552536
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttatt 167  Q
    ||||||||||||||||||||||||||  |||||||| |||||| ||||||||| ||| ||||||    
T  18552599 tagggttctaagatgaacctctatttgttttgttggataattatttaatttaatgtcatttatt 18552536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 590 - 641
Target Start/End: Complemental strand, 29028021 - 29027970
Alignment:
Q  590 tcatacctttggaaatttaggaactctaatttaattttatgtttcaattacc 641  Q
    |||||||||||||||||||||||| | ||||||| | |||||||||||||||    
T  29028021 tcatacctttggaaatttaggaacgccaatttaagtctatgtttcaattacc 29027970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 482 - 521
Target Start/End: Complemental strand, 32085976 - 32085937
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  32085976 taaggtagacgctgatagagctgcccgtttgtagaactac 32085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 404 - 557
Target Start/End: Original strand, 41789984 - 41790137
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacg-ctgatagg 500  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||||||||| | || ||||| |||||| ||  |||||   |||  || ||| ||||   |    
T  41789984 agtaactagttagtaattaatgaaacatgtgacttcatgacttaactcagctcagtaacttcattctcctcgcaccttggtaaaatatacgtctga---g 41790080  T
Q  501 gctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattca 557  Q
     || |||||||||||||||||||||| ||||| |||  ||||||||||||| |||||    
T  41790081 actacccgtttgtagaactaccgagagggagaatgtgctatgtacttctaagattca 41790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 13777058 - 13777008
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggaga 532  Q
    |||||||||||||||||||||  ||||||||||||| |||||||| |||||    
T  13777058 taaggtagacgctgatagggcatcccgtttgtagaaataccgagagggaga 13777008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 23010827 - 23010921
Alignment:
Q  106 agggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtctttta-ttcag-ttattttctattcgctatttagtttta 197  Q
    |||||||||||||||||||||||||  |||||||| |||||| |||||||||  || |||| || || ||||||||| ||||||||| |||||||    
T  23010827 agggttctaagatgaacctctatttgatttgttggataattatttaatttaatctcatttattttagtttattttctgttcgctattaagtttta 23010921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 26659804 - 26659870
Alignment:
Q  61 gtaatttgtttt-tagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||| ||| || |||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  26659804 gtaatttgttttctagttagcatgtgtaactaactctttttaggttagcgttctaagatgaacctct 26659870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 27540900 - 27540965
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||| |||| ||||| ||||||| ||||| |||||||||||| |||| |||||||||| |||||||    
T  27540900 gtaacttgtgtttagttaccatgtgtaaccaaatctttttaggttagagttctaagataaacctct 27540965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 18122135 - 18122063
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaattattaa 151  Q
    |||| |||||||| ||||||| | |||| |||||||||||||||||||||| | |||||||| || |||||||    
T  18122135 catgtgtaactaattctttttgggttagagttctaagatgaacctctatttatttttgttggttatttattaa 18122063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 18923068 - 18923001
Alignment:
Q  107 gggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagttatttt 177  Q
    ||||||||||||||||||||||||| ||||||    ||||||| | || |||| |||||||||||||||||    
T  18923068 gggttctaagatgaacctctattttatttgtt---aaattatttaatttaagttttttattcagttatttt 18923001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 486 - 522
Target Start/End: Original strand, 23011225 - 23011261
Alignment:
Q  486 gtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23011225 gtagacgctgatagggctgcccatttgtagaactacc 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 860 - 920
Target Start/End: Complemental strand, 36357331 - 36357271
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggt 920  Q
    |||||||| ||||||||| ||||||| |||||||||||||||| |  |||||||| |||||    
T  36357331 aataaatagaggggattcgaagaatcttaaccgccactaacatcctacaatcaaactaggt 36357271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 8446214 - 8446293
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||| ||||||| | |  |||  ||| ||| ||||||||||||||||||| ||||||||    
T  8446214 gtaatttgtgtttagttaccatgagcaactaaaccctaatagggtagagttttaagatgaacctctattttatttgttgg 8446293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 522
Target Start/End: Original strand, 9761906 - 9761945
Alignment:
Q  483 aaggtagacgctgatagggctgcccgtttgtagaactacc 522  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  9761906 aaggtagacgctgatagggcttcctgtttgtagaactacc 9761945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 31427180 - 31427101
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||| ||||||||||||| | | ||||  |||| || ||||||| ||||||||||| ||||||||    
T  31427180 gtaatttgtctttagttactatgagtaactaaaccctattagggtaggattttaagatgtacctctattttatttgttgg 31427101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 657
Target Start/End: Original strand, 45621472 - 45621527
Alignment:
Q  602 aaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagac 657  Q
    |||||||||||| | ||||||| | |||||||||||||||||| || |||||||||    
T  45621472 aaatttaggaacgccaatttaagtctatgtttcaattacccctgagggagtaagac 45621527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 595 - 641
Target Start/End: Original strand, 20174218 - 20174264
Alignment:
Q  595 cctttggaaatttaggaactctaatttaattttatgtttcaattacc 641  Q
    ||||||||||| ||||||| | ||||||||| |||||||||||||||    
T  20174218 cctttggaaatctaggaacacaaatttaattctatgtttcaattacc 20174264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 495 - 532
Target Start/End: Complemental strand, 18932879 - 18932842
Alignment:
Q  495 gatagggctgcccgtttgtagaactaccgagaaggaga 532  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  18932879 gatatggcagcccgtttgtagaactaccgagaaggaga 18932842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 20173284 - 20173321
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaact 519  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  20173284 taaggtagacgttgatagggctgcctgtttgtagaact 20173321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 482 - 551
Target Start/End: Complemental strand, 20174816 - 20174747
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaa 551  Q
    ||||||| ||| |||||||| |||| |||| |||||||||||||| | |||||||  |||| ||||||||    
T  20174816 taaggtacacgatgatagggatgcctgtttctagaactaccgagaggaagagtgtgctatgaacttctaa 20174747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 61 - 976
Target Start/End: Original strand, 12838853 - 12839764
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||||| |||||||||| |||||||||||||||  |||| ||||||||||||| ||||||| ||||||||| |||||                  
T  12838853 gtaatttgtctttagttaccatgagtcactaaatctttttaggctaggattctaagatgaacttctatttggtttgttggataatt-------------- 12838938  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtag-tga 259  Q
      ||||||||||||||| | | ||||||||| ||||||| || ||| ||||||||||||||||||||| |||||| | | |||| |||||| | || |||    
T  12838939 --ttattcagttattttatgtacgctatttatttttactatagtgcataagatttgtctcctctgaagtataaccctaaattaggcacttacggagatga 12839036  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtact 358  Q
    || | |||||||||||| | ||| | |  |||| ||||||||||||||||||| | ||||||||||||  |||||||||| || ||||||||||||||||    
T  12839037 cata-cctaatattgatgtctatctct--ctaatcaggaagtaattaattagtaactagcgaaacaaaccgaaagcgagcgtaccctgatagtaagtact 12839133  T
Q  359 caggggtgtgacatatctaatattgatgaatatctatt-taa--atatagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacc 455  Q
     ||||  |||||||| |||||||||||||| |||| || |||  || |||||||||||| ||||||||||||||| ||| ||| | |  |||| |   ||    
T  12839134 tagggaggtgacatacctaatattgatgaacatctgttgtaatcatgtagtaactagttagtaattaaggaaacaggtgactttatgttttaaattttcc 12839233  T
Q  456 cactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaa 553  Q
     | |||||||||| ||||||||| |   ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| |    
T  12839234 tagtaactccattattctttcacattggtaaggtagacgcttatagggatgcccgtttgtagaactaccgagagggagagtgtgttatgtacttctaaga 12839333  T
Q  554 ttcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagta 653  Q
    || | |||  | | |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||| || |||| || | ||||||    
T  12839334 tttacagatgaggaaacctttaggaacactgggaagtcatacctttgaaaatttaggaaatctaatttaagtttatgttttaactacctctgatcgagta 12839433  T
Q  654 agacccctacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagaccta-atctataagagagtaagacccccgcatgtaaggatc 752  Q
    ||| ||  |||||||| ||  |||||||||||||||||||| | ||| |||||||||| |||| ||||   ||||||||||  |||| || |||||||||    
T  12839434 agatccacacgaaccgacacatggatcagcaggtgcaactcgacaggtggagggataggcctacatcttagagagagtaag-gccccacacgtaaggatc 12839532  T
Q  753 -------------attgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaatt 839  Q
                 |  ||||||| ||| | |||||||||||||  |||| |  | ||||||||||||| |||||||||||||||||||||||||| | ||    
T  12839533 accgtatgaccagaaggtgcaacatgataactgattaggttataacgtccctgcgaactcatcactta-atagtctacttagaataattgaacttaactt 12839631  T
Q  840 ttctgttaatt-atttccaacaataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgtt-gc 936  Q
      ||| ||||| ||||| || |||||||| |||||| |||||||||| |||||||        ||| | |||||||| |||||||||||  | |||| |     
T  12839632 gactgataattaatttcaaaaaataaatagaggggaatcaaagaatcataaccgc--------ttctgtaatcaaaagaggtaaactttgttatgttgga 12839723  T
Q  937 aacagattaactttgc-aaactttaaacccttatctcttta 976  Q
    |||| ||||||||||| |||||||||| |||||||||||||    
T  12839724 aacaaattaactttgcaaaactttaaatccttatctcttta 12839764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 61 - 660
Target Start/End: Original strand, 11520177 - 11520780
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||||| |||||||| ||| |||| |||||||   ||||||||||||||||||||| ||||| |||||||| |||||||| |||||| |||    
T  11520177 gtaatttgtctttagttaccatgaataattaaacctttttatgctagggttctaagatgaacctcgattttatttgttggataattatttaatttatagt 11520276  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
      |||||| ||||||||||| || |||||||||||||| |||||||||||| | |||||||||||| ||||||||| ||| |||| |||||| |||||||    
T  11520277 tgtttattaagttattttctgtttgctatttagttttattgtaatgcgtaaaacttgtctcctctggagcataaccctgacttaggcacttaggtagtga 11520376  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagctatcctgatagtaagtactc 359  Q
    ||   |||||||||||||||||||| |||||||| |||||||||||||||| | | ||| ||||| ||  |||||||||    ||  ||||||||| ||     
T  11520377 cattgcctaatattgatatttatatctgtctaactaggaagtaattaattattaactagtgaaacgaaccgaaagcgagtgtacccaatagtaagttctt 11520476  T
Q  360 aggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaaccc 456  Q
    ||| | |||||||| |||||||||||| | || | || ||||    |||||| ||||| |||||||||||||||  || ||| ||||||| | ||| |||    
T  11520477 aggag-gtgacataactaatattgatgtaaatatgttgaaattaggtagtaagtagttagtaattaaggaaacaattgacttaacgacttcaatcagccc 11520575  T
Q  457 actaactccattcttctttcacc--tataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaat 554  Q
    | |||||||||||||||| ||||  | |||||||||||||||||||| ||  ||||||||||||| |||||| || |||||| || ||| ||||||| ||    
T  11520576 agtaactccattcttcttgcacctttctaaggtagacgctgatagggttgttcgtttgtagaacttccgagatggtgagtgtgttgtgtgcttctaagat 11520675  T
Q  555 tcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaa 654  Q
    | |||||  | |||| ||||| ||| | |  ||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||| ||| |||||||    
T  11520676 ttatagatgagggaatctttacgaatact-agaagtcatacctttggaaatttaggaaatctaatttatgtttatatttcaattacccataaacgagtaa 11520774  T
Q  655 gacccc 660  Q
    ||||||    
T  11520775 gacccc 11520780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 482 - 983
Target Start/End: Complemental strand, 9053294 - 9052782
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||  ||| ||| |||||   |||||||  |  |||||||||||||||    
T  9053294 taaggtagacgctgatagggctgcccgtttgtagaactaccaagagggagagcgtgctatttacatctaaggctcatagatgaaagaacctttaggaaca 9053195  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccctacgaaccgtcatgtggatca 681  Q
    |||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||||||| || |  ||||||||| || || | | ||||  |||||||    
T  9053194 ttgggaagccatacctttgaaaatttaggaacgctaatttaagtctatgtttcaattacctcttaaagagtaagactcccacaatctgtcacatggatca 9053095  T
Q  682 gcaggtgcaactcaataggcggagggatagaccta-atctataagagagtaagacc--------cccgcatgtaaggatca--ttgtgcaacttgacagc 770  Q
    |||||| |||||  ||||   ||||| | |||| | |||| | |||| ||||||||        ||  || ||  ||||||    |||||||||||||      
T  9053094 gcaggtacaacttgatagctagaggggttgaccgacatctctgagagggtaagaccctcaagaaccttcacgt--ggatcaacaggtgcaacttgacaat 9052997  T
Q  771 tgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatata 869  Q
    |||||||||| |   ||| |||| |||| || ||||| |||||||||||| ||| | ||||||||| ||  |||||| ||| ||||||| |||||||| |    
T  9052996 tgattaggtt-taatgtcccaacgaactaattacttaaatagtctacttaaaat-actgaacttgacttgactgttatttaattccaacgaataaataga 9052899  T
Q  870 ggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgcaaactttaaaccctt 967  Q
    |||||||||||||||||||||||||| |||||||| | |||||||| || ||| |||| |||| |||| |||| ||||| || | ||||| ||||| |||    
T  9052898 ggggattcaaagaatcctaaccgccattaacattctgtaatcaaaacagttaatctttcctctattgcaaacatattaaattggaaaactataaactctt 9052799  T
Q  968 atctc-tttatttattt 983  Q
    ||||| |||||||||||    
T  9052798 atctcttttatttattt 9052782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 105 - 660
Target Start/End: Original strand, 26114994 - 26115551
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctatttagttttactgtaa 203  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| |||||| |||  |||||||| ||||||| | ||||||||||||||||||||||     
T  26114994 tagggttctaagatgaacctctattttatttgttgaataattatttaatttatagttgtttattcaattattttatgttcgctatttagttttactgtag 26115093  T
Q  204 tgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatgtctaaccaggaagtaa 303  Q
    || ||||||||||||||||||  |||  |||| |  ||||  ||||||  ||||||||   |||||||||||||||| ||| |||||| | |||||||||    
T  26115094 tgtgtaagatttgtctcctctagagcgcaaccctagtttatgcacttagatagtgacatgacctaatattgatatttttatctgtctatctaggaagtaa 26115193  T
Q  304 ttaattagtcattagcgaaacaaattgaaagcgagct-atcctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaata 402  Q
    ||||||||| ||||| |||| | | ||||||  || | | ||| |||| ||||||| | | | |||||||  ||||||||  | || || ||  ||||      
T  26115194 ttaattagtaattagtgaaagatactgaaagtaagttgaccctaatagaaagtacttaagag-gtgacattactaatattcgt-aaaatata-ctaaacc 26115290  T
Q  403 ta----gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattctt-ctttcacct--ataaggtagacgctg 495  Q
    ||    |||||||||| |||||| |||||||| ||| ||||| ||||||| ||| |||| |||||||||| || ||  |||||   ||||||||||  ||    
T  26115291 taggatgtaactagttagtaatttaggaaacaagtgacttcatgacttaa-tcagcccagtaactccatttttcctcgcacctcggtaaggtagactttg 26115389  T
Q  496 atagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatac 595  Q
    ||||| || | ||||| |||||||||||||| ||||||||| ||||||||| |||| |||| |||  |  |||| ||||||||||| |||  |  |||||    
T  26115390 ataggacttctcgtttatagaactaccgagacggagagtgtgttatgtactcctaagattcctag--atgggaaactttaggaacactggcca-ccatac 26115486  T
Q  596 ctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||| |||||| | || |||| |  ||| |||||||||| || || ||||||||||||    
T  26115487 ctttggaaattcaggaacgccaacttaaatcaatgattcaattacctctgagggagtaagacccc 26115551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 90 - 284
Target Start/End: Original strand, 4214627 - 4214821
Alignment:
Q  90 taaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttctattcgctat 188  Q
    |||||||||||||  ||||||||||| ||||||||||||||| |||||||| || ||||| |||||||||||||| ||||||||||||| | ||||||||    
T  4214627 taaatctttttaggctagggttctaaaatgaacctctattttatttgttggatatttatttaatttaaagtcttt-attcagttattttatgttcgctat 4214725  T
Q  189 ttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatat 284  Q
    ||||||| ||| | ||||||||||||||||| || || ||||||||| |||||||| ||||||  ||||||||   ||||||||||||| ||||||    
T  4214726 ttagtttaactatcatgcgtaagatttgtcttctttggagcataaccctgatttaggcacttagatagtgacatgacctaatattgatacttatat 4214821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 61 - 283
Target Start/End: Original strand, 9264042 - 9264265
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||  ||||||||||||||||| || |||| | |||||||| |||||||| |||||| |||    
T  9264042 gtaatttgtctttagttaccatgagtaactaaatatttataggctagggttctaagatgaaactttattatatttgttggataattatttaatttatagt 9264141  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | ||||||||||||| |||| |  |  ||||||||||||||||||||||||||||| ||||||||  | ||||||  | |||||| |||||| |||||||    
T  9264142 catttattcagttatcttctgtctgtgatttagttttactgtaatgcgtaagatttttctcctctagaacataactctcatttaggcacttaggtagtga 9264241  T
Q  260 cagatcctaatattgatatttata 283  Q
    ||   |||||||||||||||||||    
T  9264242 catggcctaatattgatatttata 9264265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 23083044 - 23082905
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||||||||| ||||||||| ||||||||||||||||  | |||||||||||| ||||||||||||||||||||| |||||||| ||||| ||||    
T  23083044 gtaatttgtttttagttaccatgagaaactaaatctttttaggcttgggttctaagattaacctctattttgtttgttggataattattaaatttgaagt 23082945  T
Q  160 cttttattcagttattttctattcgctatttagttttact 199  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  23082944 cttttattcagttattttctattcattatttagttttact 23082905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 25024470 - 25024228
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattca 169  Q
    ||||| || |||||||||||||||||||||||  ||||||||||||||||||||||| ||  ||| |||  |||||||| ||||||| | | |||||| |    
T  25024470 tttagttatcatgagtaactaaatctttttagagtagggttctaagatgaacctctacttatttttttgaataattatttaatttaatgacgtttattta 25024371  T
Q  170 gttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaa 269  Q
     ||||||| | |   |||||||||||||||||  |||| |||||||||||| |||| |||  |||| |  ||||| |||||| ||||||||||  |||||    
T  25024370 tttattttatgtctactatttagttttactgttgtgcgcaagatttgtctcatctggagcgcaaccatagtttaggcacttaggtagtgacagggcctaa 25024271  T
Q  270 tattgatatttatatatgtctaaccaggaagtaattaattagt 312  Q
    ||||||||||||||| |||||| | |||||||||||| |||||    
T  25024270 tattgatatttatatctgtctatctaggaagtaattagttagt 25024228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 756 - 938
Target Start/End: Original strand, 11700333 - 11700517
Alignment:
Q  756 gtgcaacttgacag-ctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattattt 854  Q
    |||||||||||||  |||||||||||||| ||||    | |||||||||||||||||||||||||||||||||||| |  || ||  |||||||||| ||    
T  11700333 gtgcaacttgacaaactgattaggttatcacgtcctggcgaactcatcacttagatagtctacttagaataattgatcgcgacttgactgttaattaatt 11700432  T
Q  855 ccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgcaa 938  Q
    |||| || |  ||| ||| |||||||||||||||||||||| ||||||||| |||||||||||||| |||||| |||||||||||    
T  11700433 ccaagaaatgtatagaggagattcaaagaatcctaaccgccgctaacattctgcaatcaaaataggcaaacttgctctgttgcaa 11700517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 5529367 - 5529257
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaa-ttattaatttaaagtc 160  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| ||| || ||||||| |||||    
T  5529367 taatttgtctttagttaccatgagtaactaaatctttttaggttagggttctaagatgaaactctattttttttgttggataattttttaatttgaagtc 5529268  T
Q  161 ttttattcagt 171  Q
    |||||||||||    
T  5529267 ttttattcagt 5529257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 768 - 1045
Target Start/End: Original strand, 9737282 - 9737565
Alignment:
Q  768 agctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaat 866  Q
    |||||||||||||||| |||| | || ||||||||||||| ||| ||||||||||||||   |||  || ||  |||||||||| ||||||||| | |||    
T  9737282 agctgattaggttatcacgtcccgacgaactcatcacttaaatactctacttagaataacgaaacgcgacttgactgttaattaattccaacaaatgaat 9737381  T
Q  867 ataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgcaaactttaaacc 964  Q
    | |||  ||||||||||||||||||||| ||||||||| ||||||||||   ||||| ||| ||||| | | |||||||||| ||   ||| | ||||||    
T  9737382 agaggacattcaaagaatcctaaccgccgctaacattctgcaatcaaaacgtgtaaaatttgctctggtacaaacagattaaattgcaaaaatctaaacc 9737481  T
Q  965 cttatctc-tttatttattt--gtcccaaatagcaacgcaaattgtttggacgaaacgaca--tcatgt-gatacgatactctactt 1045  Q
    |||||||| |||||||||||   ||||||||   |||||||||||||| |||||||| |||   ||||| |||||||||||||||||    
T  9737482 cttatctcttttatttattttgttcccaaat---aacgcaaattgtttagacgaaactacaatccatgtggatacgatactctactt 9737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 9850480 - 9850605
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcag 170  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||  |||||||| |||||||| |||| | ||| |||||| ||    
T  9850480 tttagttaccatgagtaactaaatcttgttaggttatggttctaagatgaacctctatttattttgttggataattatttattt-atgtcgtttatttag 9850578  T
Q  171 ttattttctattcgctatttagtttta 197  Q
    ||||||| | | |||||||||||||||    
T  9850579 ttattttatgtccgctatttagtttta 9850605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 1832617 - 1832796
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| |||||||| ||||||| |||||||||  ||||||||||||| |||||||| ||||||||||||| ||  || ||||||||||||    
T  1832617 gtaatttgtctttagttaccatgaataactaactctttttaggctagggttctaagacgaacctcttttttgtttgttggatatgtatttaatttaaagt 1832716  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    | |||||||| |||| |  |    ||||||||  ||||| ||| ||||||||||||||||| | || ||||||||||||||    
T  1832717 c-tttattcaattatatcttgaatgctatttaactttaccgtagtgcgtaagatttgtctcatatggagcataaccttgat 1832796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 15049226 - 15049343
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||| | ||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| || ||   ||||||||||     
T  15049226 gtaatttatctttagttaccatgagtaactaaatcttttttggatagggttctaagatgaacctctattttgtttgttggatattttatttaatttaaat 15049325  T
Q  159 tcttttattcagttatttt 177  Q
    || ||||||||||||||||    
T  15049326 tc-tttattcagttatttt 15049343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 15105198 - 15105081
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||| | ||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| || ||   ||||||||||     
T  15105198 gtaatttatctttagttaccatgagtaactaaatcttttttggatagggttctaagatgaacctctattttgtttgttggatattttatttaatttaaat 15105099  T
Q  159 tcttttattcagttatttt 177  Q
    || ||||||||||||||||    
T  15105098 tc-tttattcagttatttt 15105081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 61 - 240
Target Start/End: Complemental strand, 23975225 - 23975049
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||||| | ||||| |||||||||||||||||   |||||||||||||   ||||||||| | |||||||| || ||||| ||||||||||    
T  23975225 gtaatttgtctttagttgccatgtgtaactaaatctttttaagctagggttctaaga---acctctattctatttgttggatatttatttaatttaaagt 23975129  T
Q  160 cttttattcagttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    |||| ||| |||||||| || ||| |||||||| |||||||||| || || | ||||||||||||| |||||||||||||||    
T  23975128 cttt-atttagttatttctcgatt-gctatttaattttactgtagtgtgttatatttgtctcctctaaagcataaccttgat 23975049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 14572848 - 14572760
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||| ||||| ||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||  |||||||| ||||||||    
T  14572848 gtaatttgtgtttagttaccatgtgtaactaaatcttattagattatggttctaagatgaacctctatttattttgttggataattatt 14572760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 18448119 - 18448275
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtctt 162  Q
    |||||| ||||| |||||||||||| |||||||||||||  ||||||||||||| |||||| |||| |||||||||| || | | |||||||||| |  |    
T  18448119 atttgtctttagttaccatgagtaattaaatctttttaggatagggttctaagaagaacctttattatgtttgttggatattaatttaatttaaaat-at 18448217  T
Q  163 ttattcagttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctc 220  Q
    |||||   |||||| || ||| |||||||| |||||||||| |||||||||||||||||    
T  18448218 ttattactttatttctcgatt-gctatttaattttactgtagtgcgtaagatttgtctc 18448275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 844 - 983
Target Start/End: Complemental strand, 19900829 - 19900688
Alignment:
Q  844 gttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aaca 940  Q
    ||||| || ||||||||| |||||||||||||| | ||||||||||||| || ||||||||  |||||||||| ||||||||||| || |||||| ||||    
T  19900829 gttaagtaattccaacaaataaatataggggatccgaagaatcctaacctccgctaacattatgcaatcaaaacaggtaaactttgctatgttgcaaaca 19900730  T
Q  941 gattaactttgcaaactttaaacccttatctctttatttattt 983  Q
    |||||| ||   ||||| ||||||||||||| |||||||||||    
T  19900729 gattaaattgcaaaactctaaacccttatct-tttatttattt 19900688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 860 - 922
Target Start/End: Complemental strand, 20315233 - 20315171
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaa 922  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  20315233 aataaatagaggggattcaaagaatcctaaccgccactaacattctgcaatcaaaacaggtaa 20315171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 7583400 - 7583335
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  7583400 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 7583335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 795 - 915
Target Start/End: Original strand, 11520993 - 11521114
Alignment:
Q  795 aactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgc 893  Q
    ||||||||||||||||||| |||||||||||||||||  ||| ||   ||||||||| || |||| ||| |||| |||  |||||||||||||||||| |    
T  11520993 aactcatcacttagatagtttacttagaataattgaatgtgacttgattgttaattaatttcaacaaatgaatagaggatattcaaagaatcctaaccac 11521092  T
Q  894 cactaacattccgcaatcaaaa 915  Q
    | ||||||||| ||||||||||    
T  11521093 cgctaacattctgcaatcaaaa 11521114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 482 - 548
Target Start/End: Original strand, 1833043 - 1833109
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttc 548  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||  ||||||||||    
T  1833043 taaggtagacgctgatagggctgcccgtttgtaaaactagcgagagggagagtgtgctatgtacttc 1833109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 404 - 535
Target Start/End: Complemental strand, 5529146 - 5529013
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||| | ||||||| ||||| | | ||||| ||||||| |||| ||| ||| ||||||||||||||||||   ||||||| ||||| ||||||    
T  5529146 agtaactagttagcaattaagtaaacaggcgacttcatgacttaaatcaatccagtaattccattcttctttcaccttggtaaggtaaacgctaataggg 5529047  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtg 535  Q
    || ||||||||| |||||| ||||| ||| ||||    
T  5529046 ctacccgtttgttgaactagcgagagggatagtg 5529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 13588243 - 13588091
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttaggg-ttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattc 168  Q
    ||||| |||||||||||||||||| |||||||  ||||| |||||||||  ||||||||| | |||||||  || || || |||||||||||||| |||     
T  13588243 tttagttaccatgagtaactaaatatttttaggctaggggttctaagatatacctctattatatttgttgaatatttttttaatttaaagtcttt-attt 13588145  T
Q  169 agttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctcct 222  Q
    |||||||| || ||| |||||||| |||||||||| ||||||||||| |||||||    
T  13588144 agttatttctcgatt-gctatttaattttactgtagtgcgtaagattagtctcct 13588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 11252823 - 11252888
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  11252823 gtaatttgtttttagttaccatgtgtaactaaatatttttaggttagagttctaagatgaacctct 11252888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 870 - 927
Target Start/End: Complemental strand, 23080553 - 23080496
Alignment:
Q  870 ggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt 927  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  23080553 ggggattcaaagaatcttaaccgccgctaacattctgcaatcaaaataggtaaacttt 23080496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 528 - 660
Target Start/End: Original strand, 11700088 - 11700219
Alignment:
Q  528 ggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaatttt 627  Q
    |||||||||  |||| |||||||| |||| |||| |   |||||||||||||||||||  |  |||||||||||||||||||||| |  ||||||| |||    
T  11700088 ggagagtgtgctatgcacttctaagattcgtagataggagaacctttaggaacattggccac-catacctttggaaatttaggaaattcaatttaagttt 11700186  T
Q  628 atgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||| ||||||  || ||||||||||||    
T  11700187 atgtttcaactacccccgagggagtaagacccc 11700219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 16730674 - 16730606
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    |||||||||||||| ||||||| |||||||| | ||||||| |||| ||||||||||||||||||||||    
T  16730674 taatttgtttttagttaccatgtgtaactaattatttttaggttagagttctaagatgaacctctattt 16730606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 22527319 - 22527155
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt-attaatttaaagtcttttattca 169  Q
    ||||| ||||||| |||||||||||||||||| ||| |||| |||||||||| |||| |||   ||||   || || ||| | || ||| | ||||||||    
T  22527319 tttagttaccatgtgtaactaaatctttttaggttaaggttttaagatgaacttctactttagctgtttaatactttatttaatttaaggcctttattca 22527220  T
Q  170 gttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataac 234  Q
     ||||||||| |  ||||||||  || |||||  |||||||||||||||||||||||||||||||    
T  22527219 attattttctttatgctatttaacttgactgtcgtgcgtaagatttgtctcctctgaagcataac 22527155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 20316862 - 20316975
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||| | ||||| ||||||||||||||||| ||||||||  ||| ||| | |||||||| |||||||||||||||||   |||||| | || ||||     
T  20316862 gtaatttttctttagttaccatgagtaactaaacctttttagggtagtgttttgagatgaacgtctattttgtttgttgg---attatttaatttaagtt 20316958  T
Q  161 ttttattcagttatttt 177  Q
     ||||||||||||||||    
T  20316959 ctttattcagttatttt 20316975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 25120693 - 25120747
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  25120693 taaggtagatgctgatagggctgcccgtttgtagaactactgagagggagagtgt 25120747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 501 - 585
Target Start/End: Complemental strand, 7612783 - 7612698
Alignment:
Q  501 gctgcccgtttgtagaactaccgagaaggagagtgtatt-atgtacttctaaaattcatagacaatggaacctttaggaacattgg 585  Q
    |||||||||||||||||||| ||||| ||||| | | || |||||||||||| ||||||||| || ||||||||||||| ||||||    
T  7612783 gctgcccgtttgtagaactatcgagatggagaatatgttgatgtacttctaagattcatagataagggaacctttaggaccattgg 7612698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 12577995 - 12578060
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||  ||||||| |||||||||||||||||  |||| ||||||||||||||||||    
T  12577995 gtaatttgtttttaattaccatgtgtaactaaatctttttatgttagagttctaagatgaacctct 12578060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 17217962 - 17217901
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||  ||||||||||||||||    
T  17217962 aatttgtttttagttaccatgtgtaactaaatctttttaggttatagttctaagatgaacct 17217901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 404 - 557
Target Start/End: Original strand, 18448355 - 18448508
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||| | | |||  ||||| |||||| ||| |||||    |||||||||| |  | |||    
T  18448355 agtaactagttagtaactaaggaaacatgtgacttcacgacttaaattagcccggtaacttcattctccttgcaccttggaaaggtagacgtt--tgggg 18448452  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattca 557  Q
    || |||||||||||||||| ||||| || ||||||  |||| |||||||| |||||    
T  18448453 cttcccgtttgtagaactatcgagagggggagtgtgctatgcacttctaagattca 18448508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 19547756 - 19547833
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgtt 138  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||  || ||||||||||||||| |||||||| ||||||    
T  19547756 gtaatttgtctttagttaccatgagtaactaatcctttttaggctaaggttctaagatgaacatctattttatttgtt 19547833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 482 - 542
Target Start/End: Complemental strand, 5956588 - 5956528
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatg 542  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||| |||||    
T  5956588 taaggtagacgctaatagggctgcccatttgtagaactaccgagagggagaatgtgttatg 5956528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 484 - 660
Target Start/End: Original strand, 9264484 - 9264659
Alignment:
Q  484 aggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacatt 583  Q
    ||||| | |||||||||| ||||||||| |||||||||| ||| ||| | |||  ||||||||||||| | |||||||  |   || ||||||||||| |    
T  9264484 aggtaaatgctgatagggttgcccgtttatagaactaccaagagggaaaatgtgctatgtacttctaagactcatagatgagaaaaactttaggaacact 9264583  T
Q  584 gggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
     | ||   ||| |||||||||||||||||| | ||||||| | ||||||||||||| | || || ||||||||||||    
T  9264584 agcaa-cgatatctttggaaatttaggaacgccaatttaagtatatgtttcaattaacactgagggagtaagacccc 9264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 7613130 - 7613051
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||| | ||||| ||||||||||||||||| ||| ||||  || |||||||||||||||||||||||| ||| ||||    
T  7613130 gtaatttatatttagttaccatgagtaactaaaccttattagggtatggttctaagatgaacctctattttattttttgg 7613051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 756 - 826
Target Start/End: Original strand, 9264773 - 9264844
Alignment:
Q  756 gtgcaacttgacag-ctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataa 826  Q
    |||||||||||||  ||||||||| |||| |||  |||| ||||||||||||||||||||||||||||||||    
T  9264773 gtgcaacttgacaaactgattaggctatcacgtaccaacgaactcatcacttagatagtctacttagaataa 9264844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 526
Target Start/End: Complemental strand, 11780969 - 11780930
Alignment:
Q  487 tagacgctgatagggctgcccgtttgtagaactaccgaga 526  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11780969 tagacgctgatagggctgcccgtttgtagaactaccgaga 11780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 482 - 521
Target Start/End: Complemental strand, 17672621 - 17672582
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17672621 taaggtagacgctgatagggctgcccgtttgtagaactac 17672582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 17710728 - 17710661
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    ||||||||||||||| ||||||| ||||||||||||||| || || | |||||||||||||| |||||    
T  17710728 gtaatttgtttttagttaccatgtgtaactaaatcttttcaggttggagttctaagatgaacatctat 17710661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 19093645 - 19093562
Alignment:
Q  85 gtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttatt 167  Q
    ||||||| || ||| ||| |||||||||||||||||||||||||||  |||||||| |||||| ||||||||| ||| ||||||    
T  19093645 gtaactagatatttataggttagggttctaagatgaacctctatttattttgttggataattatttaatttaatgtcatttatt 19093562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 22217693 - 22217807
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtct 161  Q
    |||||||| ||||| | ||||| ||||||||| ||||||||  || ||||||||||||||| ||||||||  |||||||   |||||| | || ||||      
T  22217693 taatttgtctttagttgccatgggtaactaaacctttttagggtatggttctaagatgaacatctattttacttgttgg---attatttaatttaagttc 22217789  T
Q  162 tttattcagttattttct 179  Q
    ||||||||||||||||||    
T  22217790 tttattcagttattttct 22217807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 853 - 927
Target Start/End: Complemental strand, 22526606 - 22526531
Alignment:
Q  853 ttccaacaat-aaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt 927  Q
    |||||||||| ||||| || |||||||||||||| |||||||| ||||||||  |||||||||| |||||||||||    
T  22526606 ttccaacaattaaatagagaggattcaaagaatcataaccgccgctaacattatgcaatcaaaacaggtaaacttt 22526531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 10105685 - 10105627
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatg 119  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| |||||||||||    
T  10105685 gtaatttgtttttagttaccatgtgtaactaattctttttagtttagagttctaagatg 10105627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 10782950 - 10782849
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||| | ||||| ||| |||| ||||||||| |||||||  ||||||||||||||||||||||||| || ||||| | |||||   |||||||||||    
T  10782950 gtaatttttctttagttactatgattaactaaatatttttaggctagggttctaagatgaacctctattctgattgttagataatttatttaatttaaag 10782851  T
Q  159 tc 160  Q
    ||    
T  10782850 tc 10782849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 772 - 826
Target Start/End: Complemental strand, 19882964 - 19882910
Alignment:
Q  772 gattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataa 826  Q
    |||||||||||| |||| | ||| |||||||||||||||||||||||||||||||    
T  19882964 gattaggttatcacgtctcgacagactcatcacttagatagtctacttagaataa 19882910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 8968750 - 8968815
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||| ||||||| | | || ||||||||||||||||||    
T  8968750 gtaatttgtttttagttaccatgtgtaactaattctttttcgataagagttctaagatgaacctct 8968815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 591 - 660
Target Start/End: Complemental strand, 30600418 - 30600349
Alignment:
Q  591 catacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||||||||||||||| | || |||| | |||||||||||||||||| | || ||||||||||    
T  30600418 catacctttggaaatttaggaacgccaacttaagtctatgtttcaattacccctgatcgcgtaagacccc 30600349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 603 - 659
Target Start/End: Complemental strand, 22526780 - 22526724
Alignment:
Q  603 aatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
    ||||||||||| ||||||||| | ||||||||||||||| ||||| |||||||||||    
T  22526780 aatttaggaacgctaatttaagtgtatgtttcaattacctctaagagagtaagaccc 22526724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 10087865 - 10087790
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttg 136  Q
    ||||||||| ||||| |||||| |||||||||||| | ||||  |||| || ||||||||||||||||||| ||||    
T  10087865 gtaatttgtctttagttaccataagtaactaaatcctattagggtaggattataagatgaacctctattttatttg 10087790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 9850905 - 9850959
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||||||| ||||||||| || |||||||||||||||| |||| |||||||||    
T  9850905 taaggtagacactgatagggttgtccgtttgtagaactacagagagggagagtgt 9850959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 17673090 - 17672984
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| |||||  ||||||  ||||||||||||   || |||| |||||||||||||||||| |||  |||||||| |||||| ||||||||| ||    
T  17673090 gtaatttgtctttagtaaccatgtataactaaatcttaccaggttagagttctaagatgaacctctgtttattttgttggataattatttaatttaatgt 17672991  T
Q  160 cttttat 166  Q
    | |||||    
T  17672990 cgtttat 17672984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 906 - 982
Target Start/End: Original strand, 9264917 - 9264993
Alignment:
Q  906 gcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaaactttaaacccttatctctttatttatt 982  Q
    |||||||||| | |||||||||||||||||| ||||||| ||  ||||||||| ||||| ||||||| ||||||||||    
T  9264917 gcaatcaaaacacgtaaactttctctgttgcaaacagataaaaattgcaaactctaaactcttatct-tttatttatt 9264993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 871 - 916
Target Start/End: Complemental strand, 10589856 - 10589811
Alignment:
Q  871 gggattcaaagaatcctaaccgccactaacattccgcaatcaaaat 916  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||    
T  10589856 gggattcaaagaatcctaaccgctgctaacattctgcaatcaaaat 10589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 677 - 714
Target Start/End: Original strand, 11520860 - 11520897
Alignment:
Q  677 gatcagcaggtgcaactcaataggcggagggatagacc 714  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11520860 gatcagcaggtgcaactcgataggcggagggatagacc 11520897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 11781943 - 11781874
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| || |||| |||| ||| |||| |||| |||| | ||||||||||||||||||||    
T  11781943 gtaatttgtttttagttatcatgtgtaattaattcttgttaggttagagatctaagatgaacctctattt 11781874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 15165859 - 15165790
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| ||| |||  ||| ||||||||||||| |||| ||| ||||||||| ||||||||    
T  15165859 gtaatttgtttttagttacaatgtataattaaatctttttaggttagagttataagatgaatctctattt 15165790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 771 - 832
Target Start/End: Original strand, 26115681 - 26115742
Alignment:
Q  771 tgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaac 832  Q
    ||||||||||||| |||| | ||| |||||| ||||||| |||||||||| |||||||||||    
T  26115681 tgattaggttatcacgtcccgacagactcattacttagaaagtctacttaaaataattgaac 26115742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 518
Target Start/End: Original strand, 19636012 - 19636048
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaac 518  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19636012 taaggtagacgctgatatggctgcccgtttgtagaac 19636048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 10782599 - 10782493
Alignment:
Q  416 gtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgt 513  Q
    ||||||||| ||||| ||| ||||| ||||||| ||| | || |||||||  |||||||||||||  ||||| |||||  |||||  ||||| |||||||    
T  10782599 gtaattaagaaaacaggtgacttcatgacttaaatcagctcagtaactccgctcttctttcacctcgataagatagacattgataaagctgctcgtttgt 10782500  T
Q  514 agaacta 520  Q
    |||||||    
T  10782499 agaacta 10782493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19604514 - 19604577
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||| ||||||| | ||||| |||| |||||||||||||  ||| ||||||||||||||||    
T  19604514 gtaatttctttttagtttccatgtgtaagtaaatctttttaggatagagttctaagatgaacct 19604577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 17108073 - 17107968
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||| ||||||||| ||||||  |||||||| ||||||||  |||| ||| |||||||||||||| || | |||||||| || ||| ||||||||| ||    
T  17108073 gtaatatgtttttagttaccatatgtaactaattctttttatgttagagttataagatgaacctct-ttatttttgttggatatttatttaatttaatgt 17107975  T
Q  160 cttttat 166  Q
    | |||||    
T  17107974 cgtttat 17107968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 520
Target Start/End: Original strand, 22173040 - 22173078
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaacta 520  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  22173040 taaggtagacgctgatagggctacccgtttgttgaacta 22173078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 25095736 - 25095679
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttag-ggttctaagatgaacctct 126  Q
    ||||||| ||||||| |||||||||||||||||| |||| ||||| |||||||||||||    
T  25095736 tttttagttaccatgtgtaactaaatctttttaggttagaggttc-aagatgaacctct 25095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 17276723 - 17276686
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaact 519  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  17276723 taaggtagacgctgatagggctacccatttgtagaact 17276686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 17336047 - 17336115
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| ||||||  ||||| || ||||||||| |||  |||| |||||||||||||||||    
T  17336047 gtaatttgtttttagttaccatatgtaaccaattctttttaggttatagttc-aagatgaacctctattt 17336115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 17661327 - 17661294
Alignment:
Q  106 agggttctaagatgaacctctattttgtttgttg 139  Q
    |||||||||||||||||||||||||| |||||||    
T  17661327 agggttctaagatgaacctctattttatttgttg 17661294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 861
Target Start/End: Original strand, 21323643 - 21323744
Alignment:
Q  760 aacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac 859  Q
    ||||||||||| | ||| |||||| ||||  ||  || |||||| ||||||||| |||||||||||| |||||  || ||  |||||||||| |||||||    
T  21323643 aacttgacagccggttaagttatcacgtcttaaagaattcatcatttagatagtatacttagaataactgaacacgacttgactgttaattaattccaac 21323742  T
Q  860 aa 861  Q
    ||    
T  21323743 aa 21323744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 22171161 - 22171096
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| |||||||  ||||||||| |||| || |||  ||| ||||||||||||||    
T  22171161 gtaatttgtttttagttaccatgtttaactaaattttttaaggttacagttttaagatgaacctct 22171096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 796 - 861
Target Start/End: Complemental strand, 30600136 - 30600071
Alignment:
Q  796 actcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa 861  Q
    |||||||||||||||||| |||||||||||| |||||  || ||   ||||||||| |||||||||    
T  30600136 actcatcacttagatagtatacttagaataactgaacgcgacttgaatgttaattaattccaacaa 30600071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 119)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 81 - 695
Target Start/End: Original strand, 15611732 - 15612361
Alignment:
Q  81 atgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattcagttattttct 179  Q
    |||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||  ||||||| |||| |||||||||| || |||||| ||||    
T  15611732 atgagtaactaaatctctttaggctagggttctatgatgaacctctattttgtttgttggaaaattatttaattcaaagtcttttgtttagttatgttct 15611831  T
Q  180 attcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtag-tgacagatcctaatattgatat 278  Q
     || | |||||||| ||||| || |||||||||||||||||| ||||||||||||| ||| |||| || | | | || |||||   |||||||||||| |    
T  15611832 gtttgttatttagtcttactatagtgcgtaagatttgtctcccctgaagcataaccctgacttagtcagtaagggaggtgacattacctaatattgatgt 15611931  T
Q  279 tta-------tatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgac 370  Q
     ||       ||| ||||||| ||| ||||||||||||||| | |||| ||||||| ||||||||||| || | |||||||||||| | || |   |||     
T  15611932 ataaaaataatatttgtctaatcagaaagtaattaattagtaactagctaaacaaactgaaagcgagcgtaccttgatagtaagtatttagcgagatgag 15612031  T
Q  371 atatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccat 467  Q
    |||  ||||||||||  | || | |||||||    ||||||| |||| ||||||||||||||||||| ||| || |||||| ||||| |  |||||||||    
T  15612032 atacataatattgatacacatatgtttaaatcaagtagtaacaagttagtaattaaggaaacatgtgactttacaacttaaatcaactcggtaactccat 15612131  T
Q  468 tcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaat 565  Q
    | |||||||||||   ||| |||||||||||||||||| |||||||||||||||| ||||||||| ||| |  |||||| | |||| |||||||||  |     
T  15612132 ttttctttcaccttggtaaagtagacgctgatagggctacccgtttgtagaactatcgagaaggatagtatgctatgtattgctaagattcatagaggag 15612231  T
Q  566 ggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccctacga 665  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||| || | |||||||||||||||  |||||| |||||||||| ||||    
T  15612232 ggaacctttaggaacattggcaagtcatgcctttagaaatttaggaacgctaattgaagtctatgtttcaattacctttaagcgggtaagacccccacga 15612331  T
Q  666 accgtcatgtggatcagcaggtgcaactca 695  Q
    |||||||  ||||||| |||||||||||||    
T  15612332 accgtcacatggatcaacaggtgcaactca 15612361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 64 - 660
Target Start/End: Complemental strand, 5531123 - 5530528
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttt 163  Q
    |||| ||||||| || |||||||||||||||||||  ||  ||||| |||||||||||||| |||||| |||||||| ||| |  |||||||||||| ||    
T  5531123 atttctttttagttatcatgagtaactaaatcttt--aggctagggctctaagatgaacctatattttatttgttggataact--taatttaaagtcgtt 5531028  T
Q  164 tattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacaga 263  Q
    | || ||||||||| | || |||||||||| ||| |||| |||||||||||||||||||||| ||   |||| |||||||| |||||| |||||||||      
T  5531027 tctttagttattttatgtttgctatttagtattaatgtagtgcgtaagatttgtctcctctggagtgcaaccctgatttaggcacttaggtagtgacatg 5530928  T
Q  264 tcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag-ctatcctgatagtaagtactcagg 362  Q
     ||||||||||||| ||| || |||||||| || ||||||||||||||| | ||| ||||||||   ||||||||  || ||| |||||||||||| |||    
T  5530927 acctaatattgatacttaaatttgtctaactagaaagtaattaattagtaactagtgaaacaaacccaaagcgagtgtaccctaatagtaagtacttagg 5530828  T
Q  363 ggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccact 459  Q
     ||  |||||| |||||||||||| | ||||  | ||||     ||||||||||| ||||||||||||||| ||| ||||||||||||| ||| |||| |    
T  5530827 agt-cgacataactaatattgatgcaaatctgctgaaatcaggcagtaactagttagtaattaaggaaacaagtggcttcacgacttaaatcagcccaat 5530729  T
Q  460 aactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattca 557  Q
    ||||||||||| |   |||||   ||||||||| || ||||||| ||||| |||||||||||||||||| ||||||||| |||||||| | ||| |||||    
T  5530728 aactccattctccacgcaccttggtaaggtagatgccgataggggtgcccatttgtagaactaccgagagggagagtgtgttatgtacatataagattca 5530629  T
Q  558 tagacaatgg--aacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaag 655  Q
    |||   ||||  ||| |||||||||| |||  |  ||||| ||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||||    
T  5530628 tag---atggaaaacatttaggaacactggcca-acatacatttggaaatttaggaacgccaatttaagtttatgttttaattacccctaagcgagtaag 5530533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 86 - 641
Target Start/End: Complemental strand, 1883288 - 1882732
Alignment:
Q  86 taactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattat-taatttaaagtcttttattcagttattttctattcg 184  Q
    |||||||||||||||||  || | || |||||| |||||||||||| |||||||| || | || |||||||| | |||| | ||||||||||| | || |    
T  1883288 taactaaatctttttaggctatgattgtaagatcaacctctattttatttgttggatattcatataatttaatgccttt-actcagttattttatgtttg 1883190  T
Q  185 ctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatat 284  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |  |||||||||||||||||||    
T  1883189 ctatttagttttattgtcgtgcgtaagatttgtctcctctgaagcataaccctgatttaggcacttatgtagtgacatagactaatattgatatttatat 1883090  T
Q  285 atgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatattg 383  Q
    ||| |||||||||||||||||||||| | | ||| ||||||||   ||||||||| |||||| ||||||||||||  ||| ||||||||| |||||||||    
T  1883089 atgactaaccaggaagtaattaattattaactagtgaaacaaaccaaaagcgagcgtatcctaatagtaagtactttgggatgtgacatacctaatattg 1882990  T
Q  384 atgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct 480  Q
    ||||| |||| || ||||    |||||| ||||| |||||||||||||| | || ||||||||||||| ||| |||| ||||||||||| ||||||   |    
T  1882989 atgaacatctgttgaaatcaagtagtaagtagttagtaattaaggaaac-tatgacttcacgacttaaatcagcccaataactccattc-tctttccttt 1882892  T
Q  481 ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaac 580  Q
     ||||||| || |||||| |||| ||||||| |||||||||  |||  ||| |||| |||||||||||||| || |||| |  |  ||||||| ||||||    
T  1882891 gtaaggtatacactgatatggcttcccgtttctagaactactaagagagagtgtgtgttatgtacttctaagatccataaatgagagaaccttcaggaac 1882792  T
Q  581 attgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacc 641  Q
    | |||  | ||||||||||| || | | |||| ||||   ||| |||||||||||||||||    
T  1882791 actggcca-tcatacctttgcaattcttggaaatctaccataagtttatgtttcaattacc 1882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 64 - 551
Target Start/End: Complemental strand, 9501370 - 9500866
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatta-atttaaagtctt 162  Q
    |||| ||||||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||| | |||||||||| ||||||||  ||||||||||||    
T  9501370 atttatttttagttaccatgggtaattaaatctttttaggctagggttctaagatgaacctctactctgtttgttggataattatttgatttaaagtctt 9501271  T
Q  163 ttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacag 262  Q
    ||||||||||||||| | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| | |||| |||||||||     
T  9501270 ttattcagttattttttgttcactatttagttttactgtagtacgtaagatttgtctcctctgaagcataaccttaatttaggcccttaggtagtgacat 9501171  T
Q  263 atcctaata--------------ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctga 347  Q
      |||||||              ||||||||||||| ||||| ||||||||||||||| ||||| | |||||||||||   |||||||||| || | |||    
T  9501170 ggcctaatactgatattcatatcttgatatttatatttgtctgaccaggaagtaattagttagtaactagcgaaacaa---gaaagcgagcgtaccttga 9501074  T
Q  348 tagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacgac 444  Q
    || ||| || | ||||  |||||||| |||||||||||||| ||||  | ||||    |  ||||||||| |||||||| |||||| ||| |||||||||    
T  9501073 taataaatatttagggaggtgacatacctaatattgatgaacatctgctgaaatcaggttataactagttagtaattaatgaaacaagtgacttcacgac 9500974  T
Q  445 ttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatg 542  Q
    ||||  || |||| |||||||||||| ||  |||||   ||||||||||| |||||||| || ||||||||||||||||||||| ||||||| | |||||    
T  9500973 ttaaaccatcccaataactccattctcctcgcaccttggtaaggtagacgttgataggg-tggccgtttgtagaactaccgagagggagagtttgttatg 9500875  T
Q  543 tacttctaa 551  Q
    |||||||||    
T  9500874 tacttctaa 9500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 61 - 358
Target Start/End: Original strand, 9863430 - 9863743
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||| ||||| |||||||| ||||||||| |||||||  ||| ||||||||||||||||||||| | |||||||| |||||||| ||||||||||    
T  9863430 gtaatttgtctttagttaccatgattaactaaatatttttagggtagtgttctaagatgaacctctattctatttgttggataattatttaatttaaagt 9863529  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||   |||||| |||||||    
T  9863530 cgtttattcacttattttctattcgctatttagttttactgtagtgcgtaagatttgtctcctcttaagcataaccctgatttcagcacttaggtagtga 9863629  T
Q  260 c--------------agatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcc 344  Q
    |              | || || || |||||||||||||||||||||||| |||||||||  ||| | | ||||||||| | |||||||||||| || ||    
T  9863630 catggcctaacagtaatattcttatcttgatatttatatatgtctaaccatgaagtaattggttaataactagcgaaacgagttgaaagcgagcgtaccc 9863729  T
Q  345 tgatagtaagtact 358  Q
    ||||||||||||||    
T  9863730 tgatagtaagtact 9863743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 22468383 - 22468102
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||||||||| ||||| | ||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  22468383 gtaatttgtttttagttaccaagggtaactaaatctttttaggatagggttctaagatgaacctctattttgtttgttgaataattatttaatttaaagt 22468284  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    ||||||||  ||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||  |||||||| |||||| || |||     
T  22468283 cttttattttgttatcttctgttcgctatttagttttactatagtgcgtaagatttgtctcctctgaagtataactctgatttaggcacttaggtggtgg 22468184  T
Q  260 cagatcctaata--------------ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaa 327  Q
     | | |||||||              |||||||||||||| |||||||||||||||||||||||||| |||||  |||||||    
T  22468183 aaaagcctaatactgatatgcacatcttgatatttatatacgtctaaccaggaagtaattaattagtaattagaaaaacaaa 22468102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 61 - 284
Target Start/End: Original strand, 5221714 - 5221933
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||| | ||||||| ||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||   |||||| ||||||||||||    
T  5221714 gtaatttgttttttgttaccatgggtaactaaatctttttaggctagagttctaagatgaacctctattctgtttgttatataattatttaatttaaagt 5221813  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    |||||||||||||||||||| || |||||||||||||||     |||||||||||||| || | |||||||||| | | |||||| |||||| |||||||    
T  5221814 cttttattcagttattttctgtttgctatttagttttac-----tgcgtaagatttgtttcttttgaagcataatcctaatttaggcacttaggtagtga 5221908  T
Q  260 cagatcctaatattgatatttatat 284  Q
    ||    |||||||||||||||||||    
T  5221909 catggtctaatattgatatttatat 5221933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 127 - 660
Target Start/End: Complemental strand, 21233469 - 21232921
Alignment:
Q  127 attttgtttgttgggtaattattaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctga 226  Q
    ||||| |||||||| |||||||| | || || || |||||||| ||||||||| |||||||||| |||||||| || ||||||||||||||||||||||     
T  21233469 attttatttgttggataattatttaatttaactcgtttattcaattattttctgttcgctattttgttttactatagtgcgtaagatttgtctcctctgg 21233370  T
Q  227 agcataaccttgatttagacacttatgtagtgacagatcctaatattg--------------atatttatatatgtctaaccaggaagtaattaattagt 312  Q
    |||| ||||||||||||| || ||| ||| ||| |   ||||||||||              ||||||||||||||||||||| || |||||||||||||    
T  21233369 agcacaaccttgatttaggcatttaggtaatgagaaggcctaatattgatatttatatcttaatatttatatatgtctaaccaagatgtaattaattagt 21233270  T
Q  313 cattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaa-ta--tagtaa 408  Q
     |  ||| ||| ||||  |||| ||||  | |||| ||||||||||| ||| | |||||||| ||||||||||  || || |  | ||| ||    ||||    
T  21233269 aaccagcaaaagaaatctaaagtgagcggaccctggtagtaagtacttaggag-gtgacataactaatattgagtaaaatttgctgaaagtaggatgtaa 21233171  T
Q  409 ctagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcc 506  Q
    |||||| |||||||| |||||| ||| ||||||||||||| |||||||| ||| |||||||| ||   || |   ||||||||||||||||||||||||     
T  21233170 ctagttagtaattaacgaaacaagtgacttcacgacttaaatcaacccagtaattccattctcctcgtactttggtaaggtagacgctgatagggctgct 21233071  T
Q  507 cgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatt 606  Q
    | |||||| |||||   | | |||||||||  ||||||||||||| |||||||||      |||||||| ||||||| | ||  ||||||||||||||||    
T  21233070 catttgtaaaacta---aaagggagagtgtgatatgtacttctaagattcatagatgggaaaacctttacgaacattagcaa-ccatacctttggaaatt 21232975  T
Q  607 taggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||| ||||||||| | ||||||||||||||| || || |||||| |||||    
T  21232974 taggaacactaatttaagtctatgtttcaattaccactgagggagtaatacccc 21232921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 757 - 975
Target Start/End: Original strand, 14754895 - 14755116
Alignment:
Q  757 tgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttcc 856  Q
    |||||||||| |||||||||| ||||| |||| |||| ||||||| ||||| ||||||||||||||||||||| |||||| ||  |||||||||| ||||    
T  14754895 tgcaacttgatagctgattagattatcacgtcccaacgaactcatgacttaaatagtctacttagaataattgtacttgacttgactgttaattaattcc 14754994  T
Q  857 aac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgca 953  Q
    ||| |||||||| | ||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||| ||||  ||| |||| ||||| |||  |    
T  14754995 aactaataaatagatgggattcaaagaatcttaaccgccattaacattctgcaatcaaaatagggaaactttgctctactgcaaacaaattaaatttcaa 14755094  T
Q  954 aactttaaacccttatctcttt 975  Q
    || ||||||| |||||||||||    
T  14755095 aaatttaaactcttatctcttt 14755116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 21502267 - 21502103
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    ||||||||||||||| ||||||  |||||||||||||||||   ||||||||||||||||||||||||||| ||  |||| |||||||| ||||||||||    
T  21502267 gtaatttgtttttagttaccattggtaactaaatctttttacgctagggttctaagatgaacctctattttattcattggataattatttaatttaaagt 21502168  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctct 224  Q
    | |||||| ||||||||| | ||||||||||||||||||| || |||||||||||||||||||||    
T  21502167 cgtttatttagttattttatgttcgctatttagttttactatagtgcgtaagatttgtctcctct 21502103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 90 - 327
Target Start/End: Complemental strand, 1874330 - 1874092
Alignment:
Q  90 taaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaattat-taatttaaagtcttttattcagttattttctattcgcta 187  Q
    ||||| ||||||| ||| | ||||||||||||||||||||| | |||||||| || | || |||||||| | |||| ||||||||||||| | || ||||    
T  1874330 taaatatttttaggttatgattctaagatgaacctctatttctatttgttggatattcatataatttaatgccttt-attcagttattttatgtttgcta 1874232  T
Q  188 tttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgatatttatatatg 287  Q
    || ||||||| |||  || |||||||||||||||||| ||| |||||| |||||||| ||||||||||||||||    ||||||||||||||||||||||    
T  1874231 ttgagttttattgtcgtgtgtaagatttgtctcctctaaagtataaccctgatttaggcacttatgtagtgacatggactaatattgatatttatatatg 1874132  T
Q  288 tctaaccaggaagtaattaattagtcattagcgaaacaaa 327  Q
     |||||||| ||||||||||||| | | ||| ||||||||    
T  1874131 actaaccagaaagtaattaattattaactagtgaaacaaa 1874092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 62 - 284
Target Start/End: Original strand, 6040030 - 6040253
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtc 160  Q
    |||||||||||||| |||||||||||||||||| |||||||  ||||||| ||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  6040030 taatttgtttttagttaccatgagtaactaaatatttttaggctagggttttaagatgaacctctattttatttgttggataattatttaatttaaagtc 6040129  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgac 260  Q
     ||| |||| | ||||| | |||| ||||||||||||||||| |||||||||||| ||| |  ||||||  |||| |||||||   ||||| ||||| ||    
T  6040130 attttttcaataattttatgttcgttatttagttttactgtagtgcgtaagatttatcttccttgaagcgcaaccctgatttatgaacttaggtagtaac 6040229  T
Q  261 agatcctaatattgatatttatat 284  Q
    |   ||||||||  ||||||||||    
T  6040230 atggcctaatatctatatttatat 6040253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 61 - 642
Target Start/End: Complemental strand, 10650348 - 10649752
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| ||| |||||||| ||||| |||||||  || |||||||||||||||||| ||||  |||||||| || ||| ||||||||||||    
T  10650348 gtaatttgtttttagttactatgagtaattaaatatttttaggctacggttctaagatgaacctcaatttcatttgttggatatttatttaatttaaagt 10650249  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
     ||||||||| ||||||| | |||| | |||||||||||| |  ||| ||||||||||||||| || ||||||| | | | ||||  ||||| ||||||     
T  10650248 -ttttattcaattattttttgttcgttgtttagttttactatcgtgcataagatttgtctcctatggagcataaacctcacttaggtacttaggtagtgg 10650150  T
Q  260 cagatcctaata--------------ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag-ctatcc 344  Q
    |||  |||||||              ||||||||||||| | ||||||| ||||||||||||||| | | ||| ||||||||  ||||| |||  || ||    
T  10650149 caggacctaatattgatgtttatatcttgatatttatatctctctaacctggaagtaattaattattaactagtgaaacaaaccgaaagagagtgtaccc 10650050  T
Q  345 tgatagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcac 441  Q
    |||||||||||||| |||   |||||||| | |||||||||||| || |  | ||||    |||||||||||| |||||||||||||| | || |||||     
T  10650049 tgatagtaagtacttaggaaggtgacataccaaatattgatgaacatatgctgaaatcaagtagtaactagttagtaattaaggaaac-tatgacttcat 10649951  T
Q  442 gacttaactcaacccactaactccattcttctttcacctataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattat 541  Q
    ||||||| ||| | || | ||||||||  |||| |    |||| ||||||||| |||||| || | |||| || |||||   |||  |||| ||| ||||    
T  10649950 gacttaaatcagctcagtgactccatt-atcttcccttgataaagtagacgctaatagggttgactgtttatataactattaagatagagaatgtgttat 10649852  T
Q  542 gtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacc 641  Q
    |||||| ||| ||||||||| ||  ||||||| |||||||||||  | |||||||||| ||||| |||||||||||   ||| |||| ||||||||||||    
T  10649851 gtacttttaagattcatagataagagaaccttcaggaacattggcca-tcatacctttcgaaatctaggaactctaccctaagtttaagtttcaattacc 10649753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 5482368 - 5482232
Alignment:
Q  148 ttaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagaca 247  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||| ||||| ||||||||||||| ||| |||||||| ||| |||||| |||||||||||    
T  5482368 ttaatttaaagttttttattcagttattttctgttcactatttaattttattgtaatgcgtaaggtttatctcctctaaagtataaccctgatttagaca 5482269  T
Q  248 cttatgtagtgacagatcctaatattgatatttatat 284  Q
    |||| ||||||||||   |||||||||||||| ||||    
T  5482268 cttaggtagtgacagtgtctaatattgatattcatat 5482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 61 - 240
Target Start/End: Complemental strand, 10938668 - 10938489
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| |||| | |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||    
T  10938668 gtaatttgtctttagttaccctaagtaactaaatctttttaggctagggttctaagatgaacctctattatgtttgttgcgtatttatttaatttaaagt 10938569  T
Q  160 cttttattcagttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
     |||||||||||||||| || | | | |||||| |||||||||  || ||||||||||||||||||  ||||||||| ||||    
T  10938568 -ttttattcagttatttctcgaat-gttatttaattttactgtggtgtgtaagatttgtctcctctagagcataaccctgat 10938489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 366 - 640
Target Start/End: Complemental strand, 18496116 - 18495842
Alignment:
Q  366 gtgacatatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaac 462  Q
    |||||||| ||||||| |||||| ||||  ||||||    |||||| ||||| ||||||||| |||| | || ||||||||||||| | | |||| ||||    
T  18496116 gtgacatacctaatatcgatgaacatctgcttaaatcaagtagtaagtagttagtaattaagaaaac-tatgacttcacgacttaaataagcccaataac 18496018  T
Q  463 tccattcttctttcacctataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagac 562  Q
    |||||||| |||||    | ||  |||| ||||||||||||||||||||| ||||||||  ||| ||||| ||| ||||||| |||||| |||||||||     
T  18496017 tccattct-ctttccttgacaaaatagatgctgatagggctgcccgtttgcagaactactaagagggagaatgtcttatgtatttctaagattcatagat 18495919  T
Q  563 aatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattac 640  Q
     | |||||||||| ||||||| |  | ||||||||| |||||||||||||||| || |||| ||||||||||||||||    
T  18495918 gagggaacctttatgaacattagcca-tcataccttcggaaatttaggaactcgaacttaagtttatgtttcaattac 18495842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 21884300 - 21884479
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt-attaa-tttaaag 158  Q
    ||||||||| ||||| ||||||||||||||||||||||||||  || |||||||| ||||||||||||| |||||||||| ||||| ||||| |||||||    
T  21884300 gtaatttgtctttagttaccatgagtaactaaatctttttaggctaaggttctaacatgaacctctattatgtttgttggataatttattaaatttaaag 21884399  T
Q  159 tcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    ||||| ||||| |  ||||| | | |||||||| ||||||| |  |||||||||||||||||||||||| ||| ||| ||||    
T  21884400 tcttt-attcattatttttcgaat-gctatttaattttactatcgtgcgtaagatttgtctcctctgaaacatgaccctgat 21884479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 677 - 982
Target Start/End: Complemental strand, 5530448 - 5530131
Alignment:
Q  677 gatcagcaggtgcaactcaataggcggagggatagacctaatctataagagagtaagacccccgcatgtaaggatc---at----------tgtgcaact 763  Q
    ||||| || ||||| ||| ||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||   ||          |||||||||    
T  5530448 gatcaacatgtgcagctcgataggcggagggataaaccaaatctatgagagagtaagacccc-gcatgtaaggatcgccatgcgaacaacatgtgcaact 5530350  T
Q  764 tgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-t 862  Q
    |||||| |||||||||||||  ||| |||| || || ||||||||||||||||||||| ||||  |||   || ||   ||||||||| ||  ||||| |    
T  5530349 tgacagatgattaggttatcatgtcccaacgaaatcctcacttagatagtctacttaggataagagaatgcgacttgattgttaattaattgtaacaaat 5530250  T
Q  863 aaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgcaa-cagattaactttgcaaactttaa 961  Q
     |||| ||| ||||||| ||||||||||| || ||||| ||  ||||||||| ||||||||||| || | |||||| |||||||| || ||||||| |||    
T  5530249 gaataaaggagattcaatgaatcctaaccaccgctaaccttatgcaatcaaa-taggtaaacttgctatattgcaaacagattaaatt-gcaaactctaa 5530152  T
Q  962 acccttatctctttatttatt 982  Q
    |||||||||||||||||||||    
T  5530151 acccttatctctttatttatt 5530131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 756 - 1022
Target Start/End: Original strand, 16223901 - 16224172
Alignment:
Q  756 gtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttc 855  Q
    ||||||||||||| || ||||||||||| |||| || | | |||||| |||||||||||| ||| ||||||||||||  | | || |||||||||| |||    
T  16223901 gtgcaacttgacaactaattaggttatcacgtcccagcgagctcatcgcttagatagtctgcttggaataattgaacgcg-acttactgttaattaattc 16223999  T
Q  856 caac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgc 952  Q
    |||| ||| |||| |||||||||||||||||||||||  | ||||||||  ||    |||| | ||||||||| ||||||||| |||| ||||| |||      
T  16224000 caacaaatgaatagaggggattcaaagaatcctaaccatcgctaacattttgc---gaaaacatgtaaactttgctctgttgcaaacatattaaatttaa 16224096  T
Q  953 aaactttaaacccttatctctttatttattt-----gtcccaaat-agcaacgcaaattgtttggacgaaacgaca 1022  Q
    ||||| || ||||||||||||||||||||||      |||||||| || || ||||||||||| ||||||||||||    
T  16224097 aaactctacacccttatctctttatttattttgttgttcccaaataagtaatgcaaattgtttagacgaaacgaca 16224172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 405 - 546
Target Start/End: Original strand, 11218679 - 11218822
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggc 502  Q
    |||||||||| ||||||||||||||| | | ||||| ||||||| ||| |||| | |||||||||| ||  |||||   ||||||| |||||||||||||    
T  11218679 gtaactagttagtaattaaggaaacaagcgacttcatgacttaaatcagcccagttactccattctcctcgcaccttggtaaggtatacgctgatagggc 11218778  T
Q  503 tgcccgtttgtagaactaccgagaaggagagtgtattatgtact 546  Q
    | ||||||||||||||||| || ||||||||||| |||||||||    
T  11218779 ttcccgtttgtagaactactgataaggagagtgtgttatgtact 11218822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 21911620 - 21911801
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||| | ||||| |||||||| |||||||||||||||||  || |||||||| |||||||| |||| |||||||||| |||||   |||||||||||    
T  21911620 gtaatttttctttagttaccatgaataactaaatctttttaggctaaggttctaacatgaacctttattatgtttgttggataatttatttaatttaaag 21911719  T
Q  159 tcttttattcagt-tattttctattcgctatttagttttactgta--atgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    || |||||||| | ||||||  ||  ||||||||  |||||| ||   |||||||||||||||||||||||||||||||||||||    
T  21911720 tc-tttattcaatatattttgaat--gctatttaagtttactatatcgtgcgtaagatttgtctcctctgaagcataaccttgat 21911801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 482 - 659
Target Start/End: Complemental strand, 31493547 - 31493370
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaaccttt-aggaac 580  Q
    ||||||||||| ||||||||||||| ||||||||||||||  ||| ||||||||| ||||||||| |||| |||||||||      ||||||| ||||||    
T  31493547 taaggtagacgttgatagggctgcctgtttgtagaactactaagagggagagtgtgttatgtactcctaagattcatagatgggaaaacctttcaggaac 31493448  T
Q  581 attgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
    | |||  | |||||||||||||||||||| ||||| || |||| | |||||||||||||||  | || |||||||||||    
T  31493447 actggcca-tcatacctttggaaatttagaaactccaacttaagtctatgtttcaattacctttgagggagtaagaccc 31493370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 404 - 660
Target Start/End: Complemental strand, 13708187 - 13707930
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||| |||||| |||||| | ||| ||||||||||||| | | | || |||||||| |||| ||||||||   |||||||||| |||||||||    
T  13708187 agtaactagttagtaattgaggaaataagtgacttcacgacttaaataagctcagtaactccactcttgtttcaccttggtaaggtagacactgataggg 13708088  T
Q  502 ct-gcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttg 600  Q
     |  |||||||||| ||||||| ||| |||||||||  ||||| ||||||| |||||||||  |  | ||||||| |||||||||||    | || | |     
T  13708087 ttaccccgtttgtataactaccaagagggagagtgtgctatgtgcttctaagattcatagatgagcggacctttaagaacattggga--ctacacttatc 13707990  T
Q  601 gaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    | ||||||||||  |||| |||| ||||||||||||||||| |||||  |||||||||||    
T  13707989 gtaatttaggaaagctaacttaagtttatgtttcaattacctctaagacagtaagacccc 13707930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 5485024 - 5484936
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||||||||| || |||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||| ||||||||    
T  5485024 gtaatttgtttttagttatcatgggtaactaaatctttttaggccatggttctaagatgaacctctattttgtttgttggataattatt 5484936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 6007071 - 6006943
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtc 160  Q
    |||||||| ||||| ||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||  |||||||| |||||| ||||||||| ||     
T  6007071 taatttgtctttagttaccatgtgtaactaaatcttattaggttatggttctaagatgaacctctatttattttgttggataattatttaatttaatgta 6006972  T
Q  161 ttttattcagttattttctattcgctatt 189  Q
     ||| || | ||||||||| |||||||||    
T  6006971 gtttctttatttattttctgttcgctatt 6006943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 141182 - 141021
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagt 159  Q
    |||||| |||||| | |||||||  |||||||||| ||||||  |||  ||| || |||| |||||||||| |||||||| || ||||| |||||| |||    
T  141182 gtaattagttttttgttaccatggttaactaaatcgttttaggctagatttcaaa-atgagcctctattttatttgttggatatttatttaatttatagt 141084  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctc 223  Q
     ||| ||||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||    
T  141083 attt-attcagttattttatattcgttatttagttttactgtcgtgcgtaagatttgtctcctc 141021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 416 - 660
Target Start/End: Original strand, 22338810 - 22339055
Alignment:
Q  416 gtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgt 513  Q
    |||||||| |||||| ||| ||||| || |||  ||| || | |||||||||||| ||  |||||   ||||||| ||||| |||||||| || ||||||    
T  22338810 gtaattaatgaaacaagtgacttcatgatttatatcatcctagtaactccattctcctcgcaccttggtaaggtatacgctaatagggctacctgtttgt 22338909  T
Q  514 agaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaac 613  Q
    ||||||||||||| | |||||||  ||||||||  ||| |||||||||      |||||||||||||| |||  | |||||||||||| |||||| ||||    
T  22338910 agaactaccgagaggaagagtgtgctatgtactcataagattcatagatggaaaaacctttaggaacactggcca-tcatacctttgggaatttatgaac 22339008  T
Q  614 tctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
     | ||||||| | |||||||||||||||| | || ||||||||||||    
T  22339009 accaatttaagtctatgtttcaattacccttgagggagtaagacccc 22339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 61 - 240
Target Start/End: Complemental strand, 9917566 - 9917386
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| ||||||| || ||||||| |||||||  |||||||||||||||| |||||||| || ||| ||| |||||   |||||||||||    
T  9917566 gtaatttgtctttagttaccatgtgtgactaaatatttttagactagggttctaagatgagcctctattatggttgctggataatttatttaatttaaag 9917467  T
Q  159 tcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    || ||| ||||| |||||||| | | ||| ||| |||||||||  ||||||||||||||||  || ||| ||||||| ||||    
T  9917466 tc-tttgttcaggtattttctttacactaattaattttactgtcgtgcgtaagatttgtcttgtcagaatcataaccctgat 9917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 61 - 240
Target Start/End: Complemental strand, 9925478 - 9925298
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| ||||||| || ||||||| |||||||  |||||||||||||||| |||||||| || ||| ||| |||||   |||||||||||    
T  9925478 gtaatttgtctttagttaccatgtgtgactaaatatttttagactagggttctaagatgagcctctattatggttgctggataatttatttaatttaaag 9925379  T
Q  159 tcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat 240  Q
    || ||| ||||| |||||||| | | ||| ||| |||||||||  ||||||||||||||||  || ||| ||||||| ||||    
T  9925378 tc-tttgttcaggtattttctttacactaattaattttactgtcgtgcgtaagatttgtcttgtcagaatcataaccctgat 9925298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 869 - 975
Target Start/End: Complemental strand, 5797735 - 5797627
Alignment:
Q  869 aggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgcaaactttaaaccct 966  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||| ||||||||| || ||||||||||   ||| | ||||||||    
T  5797735 aggggattcaaagaatcctaaccgctgctaacattctgcaatcaaaacaggtaaactttgctctgttgcaaatagattaacttgaaaaaatctaaaccct 5797636  T
Q  967 tatctcttt 975  Q
    |||||||||    
T  5797635 tatctcttt 5797627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 482 - 574
Target Start/End: Complemental strand, 9917144 - 9917052
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaaccttt 574  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||  ||| |||||||||||||||||||  | |||||||||    
T  9917144 taaggtagatgctgatagggctgcccatttgtagaaataccgagagggagagtgtgctatttacttctaaaattcatagatgagggaaccttt 9917052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 482 - 574
Target Start/End: Complemental strand, 9925056 - 9924964
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaaccttt 574  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||  ||| |||||||||||||||||||  | |||||||||    
T  9925056 taaggtagatgctgatagggctgcccatttgtagaaataccgagagggagagtgtgctatttacttctaaaattcatagatgagggaaccttt 9924964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 22337615 - 22337711
Alignment:
Q  181 ttcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacagatcctaatattgata 277  Q
    |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||  ||| |  ||||| ||||||||||| || ||||||||||    
T  22337615 ttcgctatttagttttactgtagtgcgtaagatttgtctcctttggagcataaccttagtttgggtacttaggtagtgacagagcccaatattgata 22337711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 860 - 972
Target Start/End: Original strand, 21912345 - 21912460
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgc-aaac 956  Q
    ||||||||||||| |||| |||||||||||  ||| ||||||||| |||||||||| | ||||||||| ||||||||| || ||||||||||||| ||||    
T  21912345 aataaatatagggtattcgaagaatcctaaatgccgctaacattctgcaatcaaaacatgtaaactttgctctgttgcaaatagattaactttgcaaaac 21912444  T
Q  957 tttaaacccttatctc 972  Q
    | ||||||||||||||    
T  21912445 tctaaacccttatctc 21912460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 3586218 - 3586284
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    |||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  3586218 atttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctctattt 3586284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 24751922 - 24752084
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||| || |||| ||||||||||||||||  | | ||| |||| ||||     
T  24751922 gtaatttttttttagttaccatgagtaactaaacttttttaggttagggttctaaaataaaccactattttgtttgttgg--attaatttattt-aagtt 24752018  T
Q  161 ttttattcagttat-tttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaag 228  Q
    |||||||||| ||| |||| | || ||||||| ||||||  || | |||||||||||||||||||||||    
T  24752019 ttttattcagatatatttcgaatc-ctatttaattttac--tagtacgtaagatttgtctcctctgaag 24752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 4450060 - 4449995
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  4450060 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 4449995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 773 - 1022
Target Start/End: Original strand, 9864104 - 9864361
Alignment:
Q  773 attaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatatagg 871  Q
    |||||||||||  ||| | || |||||||||||||||||||||||||| |||||||||||  |  ||  |||||||||| |||| || ||| |||  |||    
T  9864104 attaggttatcatgtcccgacgaactcatcacttagatagtctacttaaaataattgaacgcggcttgactgttaattaattcccacaaatgaatggagg 9864203  T
Q  872 ggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaaactttaaacccttatc 970  Q
    ||||||||||||| ||||| | |  | | |||| |||||||||| ||||||  || || |||||| |||||| ||| ||   ||||| ||||||||||||    
T  9864204 ggattcaaagaatgctaactgtcgttgatattctgcaatcaaaacaggtaactttgctttgttgcaaacagagtaaattgcaaaactctaaacccttatc 9864303  T
Q  971 tcttta-----tttatttgtcccaaat-agcaacgcaaattgtttggacgaaacgaca 1022  Q
    ||||||     ||||||  || ||||| || |||||||||||||| ||||||||||||    
T  9864304 tctttatatattttattgttctcaaataagtaacgcaaattgtttagacgaaacgaca 9864361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 13263750 - 13263815
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  13263750 gtaatttgtttttagttaccatgtgtaactaaatctttttagattagagttctaagatgaacctct 13263815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 312
Target Start/End: Complemental strand, 13708542 - 13708290
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| ||||||| |  ||||||||| | |||  ||||||||||||||||||||||||| || || |||| | |||   ||||||||||     
T  13708542 gtaatttgtctttagttaccatgtgatactaaatctctgtaggctagggttctaagatgaacctctattctggttattggatgatttatttaatttaaat 13708443  T
Q  159 tcttttattcagttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgta-g 256  Q
    || |||||| |||||||| ||| |  |||||||| ||||| | |  ||||||||||||||||||||| ||||||||||  || |||| |||||| | | |    
T  13708442 tc-tttatttagttatttctctttatgctatttatttttattttcgtgcgtaagatttgtctcctctaaagcataacccagacttaggcacttagggagg 13708344  T
Q  257 tgacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagt 312  Q
    |||||   ||||||||||  || ||||||||| ||| || |||||||| |||||||    
T  13708343 tgacattacctaatattg--atgtatatatgtttaatcaagaagtaatgaattagt 13708290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 860 - 1022
Target Start/End: Complemental strand, 18495600 - 18495437
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgcaacagattaactttgcaaa-ctt 958  Q
    |||||||| |||||||| ||||||||||||| ||| ||||||||| |||||||||||| |||||||| || ||||||||   || ||  ||||||| ||     
T  18495600 aataaatagaggggatttaaagaatcctaacagccgctaacattctgcaatcaaaatatgtaaacttgctttgttgcaa---ataaaaattgcaaatctc 18495504  T
Q  959 taaacccttatctc-tttatttatttg-tcccaaat-agcaacgcaaattgtttggacgaaacgaca 1022  Q
    |||||||||||||| ||||| | |||| || ||||| || ||| |||||||||| ||||||||||||    
T  18495503 taaacccttatctcttttatatttttgttctcaaataagtaacacaaattgtttagacgaaacgaca 18495437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 23297752 - 23297688
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctc 125  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  23297752 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctc 23297688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 9891230 - 9891151
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||  ||||||||||||||||||||||||||| ||||||||    
T  9891230 gtaatttgtctttagttaccatgagtaactaaaccctattaggatagggttctaagatgaacctctattttatttgttgg 9891151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 755 - 889
Target Start/End: Complemental strand, 16307030 - 16306896
Alignment:
Q  755 tgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattattt 854  Q
    |||||||||||||| || |||||||| || |||| |||  ||||||||||||||||||| | |||||||||| |||||  | | || |||||||||  ||    
T  16307030 tgtgcaacttgacaactaattaggttgtcacgtcccaaagaactcatcacttagatagtatgcttagaataaatgaacgcg-acttactgttaattcatt 16306932  T
Q  855 ccaac-aataaatataggggattcaaagaatcctaa 889  Q
    ||||| ||| |||| |||||||||||||||||||||    
T  16306931 ccaacaaatgaatagaggggattcaaagaatcctaa 16306896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 482 - 659
Target Start/End: Complemental strand, 18663062 - 18662888
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    |||||||||||||||||||| || ||||||||||||||||||| | ||||||||| |||  |||| |||| |||||||||      ||||||||||||||    
T  18663062 taaggtagacgctgatagggttgtccgtttgtagaactaccgaaagggagagtgtgtta--tactcctaagattcatagatgggaaaacctttaggaaca 18662965  T
Q  582 ttgggaagtcatacctttggaaatttaggaac-tctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
     |||  |  ||||||||||||||||||||||| ||| | |||| | |||||||||||||||| | |  |||||||||||    
T  18662964 ctggcca-ccatacctttggaaatttaggaacgtct-acttaactatatgtttcaattacccttgacggagtaagaccc 18662888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 39272164 - 39272227
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  39272164 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacct 39272227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 9721976 - 9721824
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttaggg-ttctaagatgaacctctattttgtttgttgggtaattatt-aatttaaagtcttttattc 168  Q
    ||||| |||||||||||||||||| |||||||  ||||| |||||||||  ||||||||| | |||||||  || || || |||||||||||||| |||     
T  9721976 tttagttaccatgagtaactaaatatttttaggctaggggttctaagatatacctctattatatttgttgaatatttttttaatttaaagtcttt-attt 9721878  T
Q  169 agttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctcct 222  Q
    |||||||| || ||| |||||||| |||||||||| ||||||||||| |||||||    
T  9721877 agttatttctcgatt-gctatttaattttactgtagtgcgtaagattagtctcct 9721824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 8053111 - 8053176
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  8053111 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctct 8053176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 8978002 - 8978067
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  8978002 gtaatttttttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 8978067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 9134193 - 9134124
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| |||||||  ||||||| ||||||||| |||| ||||||||||||||||||||||    
T  9134193 gtaatttgtttttagttaccatgtataactaattctttttaggttagagttctaagatgaacctctattt 9134124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 10991646 - 10991719
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtt 134  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||  ||||||||||| |||| |||||||||||||    
T  10991646 gtaatttgtctttaggtaccatgagtaactaaacctttttaggctagggttctaatatgaccctctattttgtt 10991719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 18467721 - 18467621
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||  |||||||||||||||||| ||||  ||  || ||||||||||||| |||||||||||||||||| |||||| |||||| |||||    
T  18467721 gtaatttgtttttacttaccatgagtaactaaatattttaggcc-agcgttctaagatgaatctctattttgtttgttggataattatttaattcaaagt 18467623  T
Q  160 ct 161  Q
    ||    
T  18467622 ct 18467621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 756 - 832
Target Start/End: Complemental strand, 21230601 - 21230524
Alignment:
Q  756 gtgcaacttgacagctg-attaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaac 832  Q
    |||||||||||||  || ||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |||||    
T  21230601 gtgcaacttgacaaatggattaggttatcacgtcccaacaaactcattacttagatagtctacttagaataactgaac 21230524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 405 - 640
Target Start/End: Complemental strand, 140822 - 140592
Alignment:
Q  405 gtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacctataaggtagacgctgatagggctg 504  Q
    |||||||||| ||||||||||||||| |   ||||||||||||| |||||||| ||||||||||| |||| ||    ||||||||||| |||||||| |     
T  140822 gtaactagttagtaattaaggaaacacga--cttcacgacttaaatcaacccagtaactccattc-tcttccattggtaaggtagacgttgatagggttc 140726  T
Q  505 cccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaa 604  Q
     || |||||| ||||||  |||  |||||| | |||||||||||||| ||||| | |  | |||||||| | ||| | ||   | |||||||||||||||    
T  140725 tccctttgtacaactactaagatagagagtatgttatgtacttctaagattcaaatatga-ggaaccttcatgaatactgacca-tcatacctttggaaa 140628  T
Q  605 tttaggaactctaatttaattttatgtttcaattac 640  Q
    | |||||||||||   ||| ||||||||||||||||    
T  140627 tctaggaactctaccctaagtttatgtttcaattac 140592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 482 - 660
Target Start/End: Original strand, 9863791 - 9863973
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgaga-ag-gagagtgtat----tatgtacttctaaaattcatagacaatggaaccttta 575  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||| || |||||||| |    |||||| |||||| | |||||||     |||||||||    
T  9863791 taaggtagacgctgatagggctccccatttgtagaactactgagagagagagagtgtgtgtgctatgtatttctaagactcatagatgggagaaccttta 9863890  T
Q  576 ggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||||  |  | |||||||| ||||||||||||| |||||||| | ||| |||||||||| | | || ||||||||||||    
T  9863891 ggaacattgg--atccgtacctttgaaaatttaggaactataatttaagtctatttttcaattactctttagggagtaagacccc 9863973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 4820288 - 4820181
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||  ||||||| |||||||| ||||||||| || | |||| ||||||||||||||||| | |||||||| || ||| ||||||||| |    
T  4820288 gtaatttgtttttatttaccatgtgtaactaattctttttaggttggagttcgaagatgaacctctatttatttttgttggatatttatttaatttaatg 4820189  T
Q  159 tcttttat 166  Q
    ||||||||    
T  4820188 tcttttat 4820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 197
Target Start/End: Original strand, 18202231 - 18202348
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagt-tatttt 177  Q
    |||| ||||||| || ||| ||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||  | ||||||| ||| ||||||    
T  18202231 catgtgtaactagatatttatagcttagg-ttctaagatgaacctcta-tttgtttgttggataattatttaatttaatattttttatttagtatatttt 18202328  T
Q  178 ctattcgctatttagtttta 197  Q
    || ||||||||| |||||||    
T  18202329 ctgttcgctattaagtttta 18202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 18448998 - 18448932
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctcta 127  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||  |||||||||||||||||| ||||    
T  18448998 gtaatttgtctttagttaccatgtgtaactaaatctttttagtctagggttctaagatgaacatcta 18448932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 8318182 - 8318247
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||| |||||||||||||| |||| ||||||| ||||||||||    
T  8318182 gtaatttgtttttagttaccatgtgtatctaaatctttttaggttagcgttctaatatgaacctct 8318247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 9612611 - 9612751
Alignment:
Q  84 agtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagtta-ttttctatt 182  Q
    ||||||||||  |||||||  | |||||| |||||||||||||||||||||||||||   |||||| |  | ||||  |||||||||||| ||||| | |    
T  9612611 agtaactaaacatttttaggcttgggttcaaagatgaacctctattttgtttgttgg---attatttaaattaagttctttattcagttatttttcgaat 9612707  T
Q  183 cgctatttagttttactgtaatgcgtaagatttgtctcctctgaagc 229  Q
    | ||||||| ||||||  || ||||||||||||||||||||||||||    
T  9612708 c-ctatttaattttac--tattgcgtaagatttgtctcctctgaagc 9612751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 9840182 - 9840322
Alignment:
Q  84 agtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttttattcagtta-ttttctatt 182  Q
    ||||||||||  |||||||  | |||||| |||||||||||||||||||||||||||   |||||| |  | ||||  |||||||||||| ||||| | |    
T  9840182 agtaactaaacatttttaggcttgggttcaaagatgaacctctattttgtttgttgg---attatttaaattaagttctttattcagttatttttcgaat 9840278  T
Q  183 cgctatttagttttactgtaatgcgtaagatttgtctcctctgaagc 229  Q
    | ||||||| ||||||  || ||||||||||||||||||||||||||    
T  9840279 c-ctatttaattttac--tattgcgtaagatttgtctcctctgaagc 9840322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 11804122 - 11804057
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  11804122 gtaatttttttttagttaccatgtgtaactaaatatttttaggttagagttctaagatgaacctct 11804057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 12330457 - 12330392
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  12330457 gtaatttatttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctct 12330392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 16057919 - 16057979
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||| ||||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  16057919 ttgtttttagttaccatgtgtaactaaatctttttaggttagagttataagatgaacctct 16057979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 17190214 - 17190274
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||| | ||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  17190214 ttgtttttagttgccatgtgtaactaaatctttttaggttagcgttctaagatgaacctct 17190274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 922
Target Start/End: Complemental strand, 21501604 - 21501436
Alignment:
Q  756 gtgcaacttgacagct-gattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattattt 854  Q
    |||||||||||||  | ||||||||||  ||||| ||| | |||||||||||||||||||||| ||  |||| |||||  || ||  |||||| ||| ||    
T  21501604 gtgcaacttgacaaatcgattaggttagaccgtcccaatagactcatcacttagatagtctacataagataactgaacgcgacttaactgttatttaatt 21501505  T
Q  855 ccaac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaa 922  Q
    ||||| ||| ||||| ||||||||||| ||| ||||| ||  ||||||||| |||| ||||| ||||||    
T  21501504 ccaacaaatgaatatgggggattcaaataattctaactgctgctaacattctgcaaccaaaacaggtaa 21501436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 1873605 - 1873485
Alignment:
Q  347 atagtaagtactcaggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttggtaattaaggaaacatgtgccttcacga 443  Q
    ||||||||||||  ||| ||||||||| |||||||||||||| |||| || ||||    |||||| ||||| |||||||||||||| | || ||||||||    
T  1873605 atagtaagtactttgggatgtgacatacctaatattgatgaacatctgttgaaatcaagtagtaagtagttagtaattaaggaaac-tatgacttcacga 1873507  T
Q  444 cttaactcaacccactaactcc 465  Q
    ||||| ||| |||| |||||||    
T  1873506 cttaaatcagcccaataactcc 1873485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 9977752 - 9977689
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    |||||||||||| || ||| ||| |||||||||||||||||| |||| ||||||||||||||||    
T  9977752 gtaatttgttttcagttacgatgtgtaactaaatctttttaggttagagttctaagatgaacct 9977689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 11218324 - 11218419
Alignment:
Q  105 tagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttattttctattcgctatttagttttact 199  Q
    |||||||||||||||||||| |||||| |||||||| |||||| ||| |||| |||  |||||| ||||||||| | || | ||||||||||||||    
T  11218324 tagggttctaagatgaacctttattttatttgttggataattatttagtttatagttgtttatttagttattttatgtttgttatttagttttact 11218419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 18362708 - 18362815
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt-tgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||| ||||||| |||||||| | ||||||| |||| |||||||||| ||||||| ||| | |||||||| || ||| ||||||||| |    
T  18362708 gtaatttgtttttagttaccatgtgtaactaattatttttaggttagagttctaagataaacctctgtttatatttgttggatatttatttaatttaatg 18362807  T
Q  159 tcttttat 166  Q
    || |||||    
T  18362808 tcgtttat 18362815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 417 - 557
Target Start/End: Original strand, 21884550 - 21884692
Alignment:
Q  417 taattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgta 514  Q
    |||||| ||||||| ||| ||||||||||||| ||| |||| ||||| |||||| ||   || |   ||||||||||||| |||||| | | ||||||||    
T  21884550 taattagggaaacaagtgacttcacgacttaattcagcccagtaacttcattctcctcgaactttggtaaggtagacgcttatagggttacacgtttgta 21884649  T
Q  515 gaactaccgagaaggagagtgtattatgtacttctaaaattca 557  Q
    ||||||| |||| |||||||||  ||||| ||||||| |||||    
T  21884650 gaactactgagagggagagtgtcatatgttcttctaagattca 21884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 12329995 - 12329941
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  12329995 taaggtagacgctgatagggctgcccagttgtagaactatcgagagggagagtgt 12329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 590 - 640
Target Start/End: Original strand, 17152724 - 17152774
Alignment:
Q  590 tcatacctttggaaatttaggaactctaatttaattttatgtttcaattac 640  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  17152724 tcatacctttggaaatttaggaacaccaatttaagtttatgtttcaattac 17152774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 860 - 975
Target Start/End: Original strand, 21885021 - 21885139
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttg-caaac 956  Q
    |||| |||||||||||||||||||| |||||| || ||||||| | ||||||| ||  ||| |||||| ||||||||| ||||| | |||||||  ||||    
T  21885021 aatatatataggggattcaaagaattctaaccaccgctaacatgctgcaatcagaactggtcaactttgctctgttgcaaacaggtcaactttgaaaaac 21885120  T
Q  957 tttaaacccttatctcttt 975  Q
    | |||||||||||||||||    
T  21885121 tctaaacccttatctcttt 21885139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 2565540 - 2565479
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| |||| | ||||||||||||    
T  2565540 gtaatttgtttttagttaccatgtgtaaataaatctttttaggttagaggtctaagatgaac 2565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 8878399 - 8878334
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||| ||| ||||||| ||||||||||| |||||| |||| ||| ||||||||||||||    
T  8878399 gtaatttgtttatagttaccatgtgtaactaaatcattttaggttagagttataagatgaacctct 8878334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 10611124 - 10611059
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||| ||| ||| |||| ||| ||||||||||||||    
T  10611124 gtaatttgtttttagttaccatgtgtaactaaatatttctaggttagagttataagatgaacctct 10611059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 13278559 - 13278494
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||   ||| |||||||||||||    
T  13278559 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttataattcaaagatgaacctct 13278494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 13756140 - 13756205
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||| ||||||||| ||||||| ||||||||||||| |||| ||||  |||||||||||||||||    
T  13756140 gtaatctgtttttagttaccatgtgtaactaaatcttcttaggttagatttctaagatgaacctct 13756205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 17078159 - 17078098
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    ||||||||||||||| ||||||| |||| ||||||| ||||| |||| ||||||||||||||    
T  17078159 gtaatttgtttttagttaccatgtgtaagtaaatctatttaggttagagttctaagatgaac 17078098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 404 - 557
Target Start/End: Complemental strand, 10938322 - 10938167
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgataggg 501  Q
    ||||||||||| ||||||||||||||| ||| ||||| || |||  ||| | || |||   |||| ||||  |||||   ||||||||||| | ||||||    
T  10938322 agtaactagttagtaattaaggaaacaagtgacttcatgatttatatcatcacaataatatcatttttctcacaccttggtaaggtagacgattataggg 10938223  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattca 557  Q
     | ||||||||||||||| | || | ||||||||| |||||||||||||| |||||    
T  10938222 ttacccgtttgtagaactccagaaagggagagtgtgttatgtacttctaagattca 10938167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 11505557 - 11505469
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||| ||||||| |||||||  ||||||||||||||||  ||||  ||||||||||||| |||||||  |||||||| || |||||    
T  11505557 gtaatttctttttagttaccatgtctaactaaatctttttaagttagaattctaagatgaacttctatttattttgttggatatttatt 11505469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 482 - 521
Target Start/End: Original strand, 2348389 - 2348428
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2348389 taaggtagacgctgatagggttgcccgtttgtagaactac 2348428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 794 - 975
Target Start/End: Complemental strand, 9245479 - 9245298
Alignment:
Q  794 aaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccg 892  Q
    ||||||||| |||||||||||||||| ||| || | |||  || ||  || ||||||| ||||| ||| ||||||  ||||||||||||||||||||| |    
T  9245479 aaactcatcccttagatagtctacttcgaacaactaaacgcgacttgactattaattaattccagcaaataaataggggggattcaaagaatcctaactg 9245380  T
Q  893 ccactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaaactttaaacccttatctcttt 975  Q
    |  |||||||||  ||| ||||| | | | |||| |||| |||| ||||||||||||||| ||||| ||||| |||| ||||||    
T  9245379 ctgctaacattcaccaa-caaaaca-gaatacttgctctattgcaaacagattaactttgaaaactctaaacacttaactcttt 9245298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 590 - 641
Target Start/End: Original strand, 10586600 - 10586651
Alignment:
Q  590 tcatacctttggaaatttaggaactctaatttaattttatgtttcaattacc 641  Q
    ||||||||||||||||||||| || | ||||||| |||||||||||||||||    
T  10586600 tcatacctttggaaatttaggcacaccaatttaagtttatgtttcaattacc 10586651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 482 - 521
Target Start/End: Original strand, 18202671 - 18202710
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  18202671 taaggtagacgctgatagggcttcccgtttgtagaactac 18202710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 19154308 - 19154181
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattca 169  Q
    ||||| ||||||| |||||||| |  || ||| |||| ||||||||||||||  ||||||  |||||||| |||||| ||||||  | ||  |||||| |    
T  19154308 tttagttaccatgtgtaactaagtagttataggttagagttctaagatgaactcctatttattttgttggataattatttaattatatgttgtttattta 19154209  T
Q  170 gttattttctattcgctatttagtttta 197  Q
    |||||||| | |||||||||||||||||    
T  19154208 gttattttttgttcgctatttagtttta 19154181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 20588262 - 20588199
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||| | ||||||  |||||||||||||||||| |||  ||||||||||||||||||    
T  20588262 aatttgtttttggttaccatatgtaactaaatctttttaggttaaagttctaagatgaacctct 20588199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 20753707 - 20753580
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattca 169  Q
    ||||| ||||||| |||||||| |  || ||| |||| ||||||||||||||  ||||||  |||||||| |||||| ||||||  | ||  |||||| |    
T  20753707 tttagttaccatgtgtaactaagtagttataggttagagttctaagatgaactcctatttattttgttggataattatttaattatatgttgtttattta 20753608  T
Q  170 gttattttctattcgctatttagtttta 197  Q
    |||||||| | |||||||||||||||||    
T  20753607 gttattttttgttcgctatttagtttta 20753580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 23008012 - 23007938
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||     |||||||||||||||||||||||| ||||||||    
T  23008012 gtaatttgtctttagttaccatgagtaactaaaacctattag-----ggttctaagatgaacctctattttatttgttgg 23007938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 590 - 660
Target Start/End: Complemental strand, 21501787 - 21501718
Alignment:
Q  590 tcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    ||||||||| ||||||||||||||   ||||||| ||||||||||||||| |||| || ||||||||||||    
T  21501787 tcataccttaggaaatttaggaacgtcaatttaagtttatgtttcaatta-ccctgagggagtaagacccc 21501718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 22338663 - 22338725
Alignment:
Q  272 ttgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaag 334  Q
    ||||||||||||| |||||| | |||||||||||||||||| |||||| ||| ||| ||||||    
T  22338663 ttgatatttatatctgtctatctaggaagtaattaattagtaattagcaaaagaaactgaaag 22338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 1862018 - 1861957
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    |||||||||||| |  |||||||  ||||||||||||||||| |||| ||||||||||||||    
T  1862018 gtaatttgttttcaattaccatgtataactaaatctttttaggttagagttctaagatgaac 1861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 3735677 - 3735609
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||| ||||||| || ||| ||| ||||||||||||||||||||| || |||||||||||| ||||||||    
T  3735677 catgtgtaactagatatttataggttagggttctaagatgaaccttta-tttgtttgttggataattatt 3735609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 6170284 - 6170227
Alignment:
Q  81 atgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgtt 138  Q
    ||||||||||||| ||| ||||  |||||||||| |||||||||||||||| ||||||    
T  6170284 atgagtaactaaaccttattagtgtagggttctatgatgaacctctattttatttgtt 6170227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 484 - 521
Target Start/End: Complemental strand, 9575029 - 9574992
Alignment:
Q  484 aggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||||||| |||||||||||||||||    
T  9575029 aggtagacgctgatagggcttcccgtttgtagaactac 9574992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 25692176 - 25692115
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    ||||||| ||||||| ||||||| |||||||| ||||||||| ||||  |||||||||||||    
T  25692176 gtaatttatttttagttaccatgtgtaactaattctttttaggttagaattctaagatgaac 25692115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 8038446 - 8038374
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgt 133  Q
    ||||||||| ||||| |||||||||||| | || |||||||   ||||||||||| ||||||||||| |||||    
T  8038446 gtaatttgtctttagttaccatgagtaaattaacctttttaagctagggttctaaaatgaacctctactttgt 8038374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 796 - 832
Target Start/End: Original strand, 8293841 - 8293877
Alignment:
Q  796 actcatcacttagatagtctacttagaataattgaac 832  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8293841 actcatcacttagatagtctacttagaataactgaac 8293877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 845 - 983
Target Start/End: Complemental strand, 9500692 - 9500553
Alignment:
Q  845 ttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgcaac-aga 942  Q
    ||||||| ||||||||| | |||| ||| |||||||| ||||||||||| |  |||||||  |||||||||  | ||||  || |||||||||||  |||    
T  9500692 ttaattaattccaacaaatgaatagaggagattcaaataatcctaaccgtcggtaacattttgcaatcaaac-atgtaactttgctctgttgcaaataga 9500594  T
Q  943 ttaactttgcaaactttaaacccttatctctttatttattt 983  Q
    |||| ||   ||||| |||||||||||||||||||||||||    
T  9500593 ttaaattgaaaaactctaaacccttatctctttatttattt 9500553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 661 - 737
Target Start/End: Original strand, 14754787 - 14754863
Alignment:
Q  661 tacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagacctaatctataagagagtaagaccc 737  Q
    ||||||| |||| |||||||| |||||||||||| |  |||  ||||||| ||| ||||||| ||||||||||||||    
T  14754787 tacgaactgtcacgtggatcaacaggtgcaactcgactggcaaagggatatacccaatctatgagagagtaagaccc 14754863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 924
Target Start/End: Complemental strand, 18449777 - 18449705
Alignment:
Q  853 ttccaacaat-aaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaac 924  Q
    |||||||||| ||||| |||||||||| ||||||||||||| |  ||| |||| |||||||||| ||||||||    
T  18449777 ttccaacaattaaatagaggggattcagagaatcctaaccgtcgttaatattctgcaatcaaaacaggtaaac 18449705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 417 - 526
Target Start/End: Original strand, 21911871 - 21911982
Alignment:
Q  417 taattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgta 514  Q
    |||||| ||||||| ||| ||| ||||||||| ||| |||| ||||| ||||||  ||  ||||   | |||||||||||| ||||||||||||||||||    
T  21911871 taattagggaaacaagtgactttacgacttaaatcatcccagtaacttcattctcgttgaaccttggttaggtagacgctgttagggctgcccgtttgta 21911970  T
Q  515 gaactaccgaga 526  Q
     |||| ||||||    
T  21911971 aaactcccgaga 21911982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 525
Target Start/End: Complemental strand, 6006633 - 6006590
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgag 525  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||    
T  6006633 taaggtagacgttgatagagctgcccgtttgtagatctaccgag 6006590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 854 - 893
Target Start/End: Complemental strand, 6042691 - 6042652
Alignment:
Q  854 tccaacaataaatataggggattcaaagaatcctaaccgc 893  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  6042691 tccaacaatataaataggggattcaaagaatcctaaccgc 6042652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 872 - 938
Target Start/End: Complemental strand, 13418744 - 13418677
Alignment:
Q  872 ggattcaaagaatcctaaccgccactaacattcc-gcaatcaaaataggtaaactttctctgttgcaa 938  Q
    ||||||||||||||||||||||  || || || | |||||||||| |||||||||| |||||||||||    
T  13418744 ggattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaa 13418677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 683 - 753
Target Start/End: Original strand, 16223815 - 16223885
Alignment:
Q  683 caggtgcaactcaataggcggagggatagacc-taatctataagagagtaagacccccgcatgtaaggatca 753  Q
    |||||||||||| | ||||||||||||| |||  ||||||| ||||||||||| |||| |||||||||||||    
T  16223815 caggtgcaactcgacaggcggagggataaaccgaaatctatgagagagtaaga-ccccacatgtaaggatca 16223885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 860 - 923
Target Start/End: Complemental strand, 20174814 - 20174751
Alignment:
Q  860 aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaa 923  Q
    |||||||| | ||||||| ||||||||||||  ||||||||||||  ||||||||| |||||||    
T  20174814 aataaatagaagggattcgaagaatcctaacgaccactaacattctacaatcaaaacaggtaaa 20174751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 864 - 914
Target Start/End: Complemental strand, 2718395 - 2718345
Alignment:
Q  864 aatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaa 914  Q
    |||| ||||||||| |  ||||||||||||||||||||||| |||||||||    
T  2718395 aatacaggggattcgagaaatcctaaccgccactaacattctgcaatcaaa 2718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 516
Target Start/End: Original strand, 3586551 - 3586585
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtaga 516  Q
    |||||||||||||||||||||||| ||||||||||    
T  3586551 taaggtagacgctgatagggctgctcgtttgtaga 3586585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 5107274 - 5107220
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    |||||||||||||||||||| ||||| |||||| ||||| ||||| || ||||||    
T  5107274 taaggtagacgctgatagggttgcccttttgtaaaactatcgagagggggagtgt 5107220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 7398156 - 7398086
Alignment:
Q  108 ggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttattcagttatttt 177  Q
    ||||||||||||||||||| |||  |||||||| |||||| ||||||| | ||| |||||| |||||||||    
T  7398156 ggttctaagatgaacctctgtttattttgttggataattatttaattttatgtcgtttatttagttatttt 7398086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 520
Target Start/End: Original strand, 10586397 - 10586435
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaacta 520  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  10586397 taaggtagacgctgatatggttgcccgtttgtagaacta 10586435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 602 - 660
Target Start/End: Original strand, 19398463 - 19398521
Alignment:
Q  602 aaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    |||||||||||||||||||||| | ||||||||||||| | || || ||| ||||||||    
T  19398463 aaatttaggaactctaatttaagtctatgtttcaattagctcttagagagaaagacccc 19398521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #115
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 7398684 - 7398639
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaag 116  Q
    ||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  7398684 tttagttaccatgagtaactaaatcattttaggttatggttctaag 7398639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #116
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 658
Target Start/End: Complemental strand, 9890798 - 9890737
Alignment:
Q  598 ttggaaatttaggaactctaatttaa-ttttatgtttcaattacccctaagcgagtaagacc 658  Q
    |||||||| || |||| |||||| || |||||||||||||||||| ||||| ||||||||||    
T  9890798 ttggaaatgtatgaacgctaattcaagttttatgtttcaattacctctaagagagtaagacc 9890737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #117
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 11512449 - 11512380
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||| |||| ||||||||||||| |||| |||||||||||||| | |||||  |||||||| || |||||    
T  11512449 catgtgtaattaaatctttttaggttagagttctaagatgaacttatatttattttgttggatatttatt 11512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #118
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 920
Target Start/End: Original strand, 15303493 - 15303534
Alignment:
Q  879 aagaatcctaaccgccactaacattccgcaatcaaaataggt 920  Q
    ||||||| |||||||||||||||||| |||||||||| ||||    
T  15303493 aagaatcataaccgccactaacattctgcaatcaaaacaggt 15303534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #119
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 17830690 - 17830625
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||| ||||| ||| ||| || |||||||||| |||  |||| ||||||||||||||||||    
T  17830690 gtaatttgtctttagttactatgtgttactaaatcttattaagttagagttctaagatgaacctct 17830625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 7e-98; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 64 - 657
Target Start/End: Complemental strand, 17977645 - 17977062
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttt 163  Q
    |||||| ||||| ||||||| |||||||||||||||||   ||| |||||||||| |||||||||||  |||||||| |||||||| | || |     ||    
T  17977645 atttgtctttagttaccatgtgtaactaaatctttttaagctagagttctaagataaacctctatttaatttgttggataattatttaattca-----tt 17977551  T
Q  164 tattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtgacaga 263  Q
    |||| ||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||     
T  17977550 tatttagttattttatgttctctatttagttttactgcaatgcgtaagatttgtctcctctgaagcataaccgtgatttaggcacttaggtagtgatagg 17977451  T
Q  264 tcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgag-ctatcctgatagtaagtactcagg 362  Q
      ||||||||||||||||||| | ||||||||||||||||||| ||||| | |||||||| |||  | ||||||| ||| |||||||||||||||| |||    
T  17977450 gtctaatattgatatttatatttttctaaccaggaagtaattagttagtaaatagcgaaataaaacgcaagcgagcctaccctgatagtaagtacttagg 17977351  T
Q  363 ggtgtgacatatctaatattgatgaatatctatttaaatatagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaac 462  Q
     | |||||||| |||||||||||| | ||| | |  | ||    || |||||  |||||| | ||||| ||| ||||||||||||| ||| || | ||||    
T  17977350 ag-gtgacataactaatattgatggaaatcaagt--agta----aattagttattaattatgaaaacaagtgacttcacgacttaaatcagcctagtaac 17977258  T
Q  463 tccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatag 560  Q
    |||||||| ||| |||||   ||||| |||||||||||||||| |||||||||| ||||||||||| ||| |||||  ||||||||||||| ||||||||    
T  17977257 tccattctccttgcaccttggtaaggcagacgctgatagggcttcccgtttgtaaaactaccgagagggatagtgtgctatgtacttctaagattcatag 17977158  T
Q  561 acaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagac 657  Q
    |     ||||||||| ||||| | |  |  |||||||||||||||||||||| || ||||||| |||||||||||||||||||| |  |||||||||    
T  17977157 attggagaacctttacgaacactagcca-ccatacctttggaaatttaggaaatccaatttaagtttatgtttcaattacccctgatggagtaagac 17977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 61 - 312
Target Start/End: Complemental strand, 24905587 - 24905335
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatta-atttaaagt 159  Q
    |||| |||||||||| || |||| |||||||||||||||||   ||||||||||||||||||||||||| |||||||||| ||| ||||  |||||| ||    
T  24905587 gtaacttgtttttagttatcatgggtaactaaatctttttatgctagggttctaagatgaacctctattctgtttgttggataactatttgatttaatgt 24905488  T
Q  160 cttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtagtga 259  Q
    | |||||||||||||||||||||  ||||||||||||||| || ||||||||||||||||| |||||||||||| | |||||||| |||||| |||||||    
T  24905487 cctttattcagttattttctatttactatttagttttactatagtgcgtaagatttgtctcttctgaagcataaacctgatttaggcacttaggtagtga 24905388  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagt 312  Q
    ||   |||||||||||||||||||| ||  ||||||| ||||||||| |||||    
T  24905387 catggcctaatattgatatttatatctgcataaccagaaagtaattagttagt 24905335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 366 - 983
Target Start/End: Original strand, 5052276 - 5052915
Alignment:
Q  366 gtgacatatctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaac 462  Q
    |||||||| |||||||||||||| ||||| | ||||    |||||||||||||||||||||||||||| ||| ||||| ||||||| | |||||| || |    
T  5052276 gtgacatacctaatattgatgaacatctactaaaattaggtagtaactagttggtaattaaggaaacaagtgacttcatgacttaaattaacccagtagc 5052375  T
Q  463 tccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcata- 559  Q
    |||||||| ||  |||||   ||||||||| |||||||||| |||| |||||||||||||| |||  ||||||||| |||||||||||||| | ||| |     
T  5052376 tccattctcctcgcaccttggtaaggtagatgctgatagggttgcctgtttgtagaactacagagtgggagagtgtgttatgtacttctaagactcaaat 5052475  T
Q  560 gacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
    || |   ||||| ||||||||||||   |  |||| ||| ||||||||||||||||||||| || ||||||||| |||| ||| | || |||||||||||    
T  5052476 gaga---gaaccattaggaacattgaccac-cataacttgggaaatttaggaactctaattcaagtttatgttttaattgcccttgagggagtaagaccc 5052571  T
Q  660 c------tacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagacctaa-tctata-agagagtaagacccccgcatgtaaggat 751  Q
    |      || | | |   ||||| | ||||||||||||||||| ||||||||||||||||| || || ||  ||||||||||||| | ||| ||||||||    
T  5052572 catgacgtaaggatcactatgtg-agcagcaggtgcaactcaacaggcggagggatagaccgaaatcgatttagagagtaagacctc-gcacgtaaggat 5052669  T
Q  752 cat-------------tgtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaat 838  Q
    ||              ||||||||||     ||||| |||||||| |||| |||| ||||||||||||||||||||||||||  |||||||||| ||| |    
T  5052670 cacagtgcgaccaacatgtgcaacttacgtactgatcaggttatcacgtcccaacgaactcatcacttagatagtctacttatgataattgaacgtgact 5052769  T
Q  839 tttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgc- 936  Q
    |  |||||||||| ||||||| |||  ||||||||||||| ||  || ||||||||| ||||||||| |||||| ||| | |||||||| |||||||||     
T  5052770 tgactgttaattaattccaacaaatgtatataggggattcgaatgattctaaccgccgctaacattctgcaatc-aaacaagtaaacttgctctgttgca 5052868  T
Q  937 aacagattaactttgcaaactttaaacccttatc-tctttatttattt 983  Q
    ||||||||||  ||||||||| |||||||||||| | |||||||||||    
T  5052869 aacagattaa-attgcaaactgtaaacccttatcttatttatttattt 5052915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 30487241 - 30487075
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||||| ||  |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |||||||| | ||||| ||    
T  30487241 gtaatttgtctttagttatgatgagtaactaaatctttttaggttatggttctaagataaacctctattttgtttgttggataattatttaattaaaatc 30487142  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaa 227  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  30487141 ttttattcagttattttctattcactttttagttttactgtagtgcgtaagatttgtctcctctgaa 30487075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 403 - 659
Target Start/End: Complemental strand, 24905338 - 24905081
Alignment:
Q  403 tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcaccta--taaggtagacgctgatagg 500  Q
    |||||||||||| |||||| |||||||| ||| |||||| |||||| |||||||| ||| |||||||| ||  |||||   |||||||||| ||||||||    
T  24905338 tagtaactagttagtaattgaggaaacaagtgacttcaccacttaaatcaacccaataagtccattctcctcgcaccttggtaaggtagacactgatagg 24905239  T
Q  501 gctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttg 600  Q
    |||||| |||||||||||||||||||   |||||||  ||||||||||| | ||||||| |  |  ||||||| || |||| |||  | ||||||||||     
T  24905238 gctgcctgtttgtagaactaccgagagatagagtgttctatgtacttcttagattcatatatgagagaaccttgagtaacaatggtca-tcataccttta 24905140  T
Q  601 gaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  24905139 gaaatttaggaattctaatttaagtttatgtttcaattacccctaagggagtaagaccc 24905081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 628 - 951
Target Start/End: Complemental strand, 17965522 - 17965184
Alignment:
Q  628 atgtttcaattacccctaagcgagtaagacccctacgaaccgtcatgtggatcagcaggtgcaactcaataggcggagggatagacctaa-tctataaga 726  Q
    |||||||||||||| || || ||||||| |||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||  ||| | |||    
T  17965522 atgtttcaattacctctgagggagtaagtcccccacgaaccgtcacgtggatcagcaggtgcaactcaacaggtggagggatagacctacgtctctcaga 17965423  T
Q  727 gagtaagacccccgcatgtaaggatcattgt-------------gcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagt 813  Q
    |||||||||| |  || ||||||||||| ||             ||||| ||| |||||||||||||||  |||| |||| ||| ||||||||| |||||    
T  17965422 gagtaagacctca-caagtaaggatcatcgtatgaccagcaggtgcaacatgatagctgattaggttataacgtcccaacgaacacatcacttacatagt 17965324  T
Q  814 ctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatca 912  Q
    ||||||||||| | |||||| || ||  |||||||||| ||||||| |||| ||| || |||||  |||||||  ||||||| ||||||||| |||||||    
T  17965323 ctacttagaat-actgaactagacttgactgttaattaattccaacaaatagatagagaggatttgaagaatctcaaccgcccctaacattctgcaatca 17965225  T
Q  913 aaataggtaaacttt-ctctgttgc-aacagattaactttg 951  Q
    ||| || |||||||| |||| |||| || ||||||||||||    
T  17965224 aaacagataaactttgctctattgcaaatagattaactttg 17965184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 65 - 326
Target Start/End: Original strand, 24519692 - 24519957
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaat-ta-ttaatttaaagtctt 162  Q
    ||||| ||||| ||||||| | ||||||||||||||||  ||||||| |||||||||||||||||||| ||||||| |||| || ||||||||||||| |    
T  24519692 tttgtctttagttaccatgtgcaactaaatctttttaggctagggttttaagatgaacctctattttggttgttggataatgtatttaatttaaagtc-t 24519790  T
Q  163 ttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat--ttagacacttatgta-gtga 259  Q
     ||||| |||||||| | |  |||||||| ||||||| |  |||||||||||| |||||| ||||  |||||| ||||   ||| |||||| | | ||||    
T  24519791 atattcggttattttatttatgctatttaattttactatcgtgcgtaagatttatctcctttgaattataaccctgatacctaggcacttaggaaggtga 24519890  T
Q  260 cagatcctaatattgatatttatatatgtc-taaccaggaagtaattaattagtcattagcgaaacaa 326  Q
    || | |||||| |||||||||||||||||| ||| |||||||||| |||||||| | ||| |||||||    
T  24519891 cata-cctaattttgatatttatatatgtcttaatcaggaagtaactaattagtgactagggaaacaa 24519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 795 - 1048
Target Start/End: Complemental strand, 15239096 - 15238834
Alignment:
Q  795 aactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgc 893  Q
    ||||||||||||| ||||||| ||||||||| |||||  ||| ||  || ||| ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  15239096 aactcatcacttaaatagtctgcttagaata-ttgaatgtgacttgactcttatttaattccaacaaataaatagaggggattcaaagaatcctaaccgc 15238998  T
Q  894 cactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaaactttaaacccttatctctttatttattt-----gtcc 987  Q
    | | ||||||| |||||| ||| ||||||  || || |||||| |||||||||| ||   ||||| |||||||||||||||||||||||||      |||    
T  15238997 ctcgaacattctgcaatc-aaacaggtaactttgctatgttgcaaacagattaaattgcaaaactataaacccttatctctttatttattttattgatcc 15238899  T
Q  988 caaat-agcaacgcaaattgtttggacgaaacgaca--tcatgt-gatacgatactctacttatc 1048  Q
    | ||| || ||||| |||||||| ||||||||||||  |||||| ||||||||| ||||||||||    
T  15238898 ctaataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatc 15238834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 459 - 588
Target Start/End: Complemental strand, 17965661 - 17965530
Alignment:
Q  459 taactccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattc 556  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||| | |||||||||| |||  ||| ||||||||| |||||||||||||| ||||    
T  17965661 taacttcattctcctttcaccttggtaaggtagacgctgatagggctgtctgtttgtagaattactaagagggagagtgtgttatgtacttctaagattc 17965562  T
Q  557 atagacaatggaacctttaggaacattgggaa 588  Q
    ||||| || || ||||||||||||||||||||    
T  17965561 atagataagggtacctttaggaacattgggaa 17965530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 366 - 559
Target Start/End: Complemental strand, 5855841 - 5855643
Alignment:
Q  366 gtgacatatctaatattgatgaatatctatttaaatatag---taactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaac 462  Q
    |||||||| |||||||||||  ||||||||| ||||   |   |||||| || ||||||||||||||| ||| |||  |||||||| | | |||| ||||    
T  5855841 gtgacatacctaatattgatttatatctattaaaatcaggaattaactatttagtaattaaggaaacaagtgactttgcgacttaaattagcccagtaac 5855742  T
Q  463 tccattcttctttcaccta--taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcata 559  Q
    |||  | |||||||||||   |||||| ||||||| || || ||||||||||||||||||| |||| ||||||||| |||||| ||||||| |||||||    
T  5855741 tccgcttttctttcacctcggtaaggtggacgctggtaaggttgcccgtttgtagaactactgagagggagagtgtgttatgtgcttctaagattcata 5855643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 18447605 - 18447712
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat-tttgtttgttgggtaatta-ttaatttaaag 158  Q
    ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||||| | ||| |||||||| || ||| ||||||||| |    
T  18447605 gtaatttgtttttagttaccatgtgtaactaaacctttttaggttagagttctaagatgaacctctgtatttttttgttggatacttatttaatttaatg 18447704  T
Q  159 tcttttat 166  Q
    ||||||||    
T  18447705 tcttttat 18447712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 19265164 - 19265099
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  19265164 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagcgttctaagatgaacctct 19265099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 23868533 - 23868598
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  23868533 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 23868598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 24722667 - 24722732
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  24722667 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 24722732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 29381357 - 29381422
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  29381357 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 29381422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 515 - 659
Target Start/End: Original strand, 30121655 - 30121798
Alignment:
Q  515 gaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaacattgggaagtcatacctttggaaatttaggaact 614  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||      |||||||| |||||||||  | ||||||||||| ||||||||||||     
T  30121655 gaactaccgagagggagagtgtgttatgtactcctaaaattcatagatgggaaaacctttaagaacattggtca-tcatacctttgaaaatttaggaacg 30121753  T
Q  615 ctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
    | ||||||| | |||||||||| ||||  | || |||||||||||    
T  30121754 ccaatttaagtctatgtttcaactaccattgagagagtaagaccc 30121798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 482 - 561
Target Start/End: Original strand, 15064833 - 15064912
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcataga 561  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||  ||||| ||||||  |||||||||    
T  15064833 taaggtagacgctgataaggctgcctgtttgtagaactaccgagagggagagtgtgctatgtgcttctatgattcataga 15064912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 25233404 - 25233339
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||| |||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  25233404 gtaatttgcttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 25233339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 26887892 - 26887827
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||| |||||||||||||| |||| ||||||||||||||||||    
T  26887892 gtaatttgtttttagttaccatgtgtagctaaatctttttaggttagagttctaagatgaacctct 26887827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 771 - 826
Target Start/End: Complemental strand, 17976939 - 17976884
Alignment:
Q  771 tgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataa 826  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  17976939 tgattaggttatcacgtcccaacgaactcatcacttagatagtctacttagaataa 17976884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 24381093 - 24381212
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||||||||| | |||||   || ||||||||||||   |||||| |||| || || ||||||||| |||||||| |||||| ||||||||||||    
T  24381093 gtaatttgtttttagttgccatgttcaaataaatctttttatgctagggtcctaaaataaatctctattttatttgttggataattatttaatttaaagt 24381192  T
Q  160 cttttattcagttattttct 179  Q
    | |||||| |||||||||||    
T  24381193 catttatttagttattttct 24381212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 6885593 - 6885539
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  6885593 taaggtagacgctaataaggctgcccgtttgtagaactactgagaaggagagtgt 6885539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 13313993 - 13314054
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  13313993 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaac 13314054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 24583850 - 24583919
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| |||||||  |||||||||||||    
T  24583850 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagagttctaaagtgaacctctattt 24583919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 26139240 - 26139175
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||  |||||||||| ||||||| |||| ||||||||||||||||||    
T  26139240 gtaatttgtttttagttaccatttgtaactaaatatttttaggttagagttctaagatgaacctct 26139175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 27660432 - 27660367
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| | |||||||||||||||| |||| ||||||||||||||||||    
T  27660432 gtaatttatttttagttaccatgtgcaactaaatctttttaggttagagttctaagatgaacctct 27660367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 17997615 - 17997551
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||   |||||||||||||||||    
T  17997615 taatttgtttttagttaccatgtgtaactaaatctttttaggttatatttctaagatgaacctct 17997551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 24109732 - 24109800
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    |||||| ||||||| || |||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  24109732 taatttatttttagttagcatgtgtaactaaatctttttaggttagagttctaagatgaacatctattt 24109800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 758 - 983
Target Start/End: Complemental strand, 24904964 - 24904742
Alignment:
Q  758 gcaacttgacag-ctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttcc 856  Q
    |||||||||||  |||| ||||||||| |||| | ||||||||||||||||||||||  ||||||||| | |||| |||| ||  |||||| ||| ||||    
T  24904964 gcaacttgacatactgagtaggttatcacgtcccgacaaactcatcacttagatagttgacttagaat-actgaatttgacttgactgttagttagttcc 24904866  T
Q  857 aa-caataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaa 954  Q
    ||  |||||||| || |||||    |||||||||||| | ||||||||| |||||| ||| | ||||  |||||||  ||| |||||||||| ||   ||    
T  24904865 aagaaataaatagagtggatt----gaatcctaaccgtcgctaacattctgcaatc-aaacaagtaacttttctcttatgcaaacagattaaattgaaaa 24904771  T
Q  955 actttaaacccttatctctttatttattt 983  Q
    ||| ||||||||| | |||||||||||||    
T  24904770 actctaaacccttctttctttatttattt 24904742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 29766110 - 29766177
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||  ||||| |||||||||| |||||    
T  29766110 aatttgtttttagttaccatgtgtaactaaatctttttaggttaaagttcttagatgaacctttattt 29766177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 853 - 983
Target Start/End: Complemental strand, 14075836 - 14075703
Alignment:
Q  853 ttccaacaat-aaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgcaa-cagattaactt 949  Q
    |||||||||| ||||| ||| ||||| |||||| ||||  |||| |||||||| |||||||||| ||| ||||||| | ||||||||| || ||||||||    
T  14075836 ttccaacaattaaatagaggtgattcgaagaattctaattgccattaacattctgcaatcaaaacagggaaactttgcactgttgcaaacatattaactt 14075737  T
Q  950 tgcaaa-ctttaaacccttatctctttatttattt 983  Q
    | |||| || |||||||||||||| ||||||||||    
T  14075736 tacaaaactctaaacccttatctc-ttatttattt 14075703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 15061424 - 15061529
Alignment:
Q  146 tattaatttaaagtcttttattcagttattt-tctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttag 244  Q
    |||| ||||||||||||| ||| |||||||| ||| |  | ||||||| ||||||||  ||||||||||||||||||| |||| ||||||| ||| ||||    
T  15061424 tatttatttaaagtcttt-atttagttatttatctttatgttatttagctttactgtcgtgcgtaagatttgtctcctttgaaacataaccctgacttag 15061522  T
Q  245 acactta 251  Q
    |||||||    
T  15061523 acactta 15061529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 795 - 903
Target Start/End: Complemental strand, 9642177 - 9642069
Alignment:
Q  795 aactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaac-aataaatataggggattcaaagaatcctaaccgc 893  Q
    ||||||| |||||||||||||||||||||||| ||||| |||  || |||||| ||| ||||||| ||| ||||  |||||||||||||||  |||||||    
T  9642177 aactcattacttagatagtctacttagaataactgaacgtgacattactgttatttaattccaacaaatgaata-gggggattcaaagaattttaaccgc 9642079  T
Q  894 cactaacatt 903  Q
      ||||||||    
T  9642078 tgctaacatt 9642069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 17100983 - 17101048
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| || | | ||||||||||||||||    
T  17100983 gtaatttgtttttagttaccatgtgtaactaaatatttttaggtttgagctctaagatgaacctct 17101048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 21315727 - 21315658
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattt 130  Q
    ||||||| ||||||| ||| ||| |||||||| ||||||||| |||  ||||||||||||||||||||||    
T  21315727 gtaatttttttttagttactatgtgtaactaattctttttaggttaaagttctaagatgaacctctattt 21315658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 843 - 923
Target Start/End: Original strand, 24119606 - 24119687
Alignment:
Q  843 tgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaa 923  Q
    |||||| || ||||||||| | ||||||||||||| | | ||||||||||||||||| ||||| |||||||||| |||||||    
T  24119606 tgttaagtaattccaacaaatgaatataggggatttatataatcctaaccgccactatcattctgcaatcaaaacaggtaaa 24119687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 24520668 - 24520733
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||| ||| ||||| |||| ||| ||||||||||||||    
T  24520668 gtaatttgtttttagttaccatgtgtaactaattctctttaggttagagttttaagatgaacctct 24520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 24851657 - 24851600
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaac 122  Q
    ||||| ||||| |||||||||||||||||| |||||||  ||||||||||||||||||    
T  24851657 tttgtctttagttaccatgagtaactaaatttttttaggctagggttctaagatgaac 24851600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 15059191 - 15059254
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||  ||  ||||||||||||||||    
T  15059191 gtaatttgtctttagttaccatgagtaactagatctttttaggctacagttctaagatgaacct 15059254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 18569948 - 18569886
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctat 128  Q
    |||||||||| ||||||| |||||||||| ||||||  |||| |||||||||||||| |||||    
T  18569948 ttgtttttagttaccatgtgtaactaaatatttttatgttagagttctaagatgaacatctat 18569886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 24645472 - 24645418
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||||||||| |||||||| || ||||||||||||||| ||||| |||||||||    
T  24645472 taaggtagacgttgataggggtgtccgtttgtagaactaacgagagggagagtgt 24645418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 853 - 914
Target Start/End: Complemental strand, 31288581 - 31288519
Alignment:
Q  853 ttccaacaat-aaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaa 914  Q
    |||||||||| ||||| |||||||||||| ||||||||||||| |||||||||  ||||||||    
T  31288581 ttccaacaattaaatagaggggattcaaataatcctaaccgccgctaacattctacaatcaaa 31288519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 24389107 - 24389042
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| ||||||| |||||||| ||||||||| | || ||| ||||||||||||||    
T  24389107 gtaatttttttttagttaccatgtgtaactaattctttttaggtaagagttataagatgaacctct 24389042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 5856138 - 5856082
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctcta 127  Q
    ||||| ||||||||||||||| ||||||||||  |||  ||||||||||||||||||    
T  5856138 tttagttaccatgagtaactacatctttttaggctagatttctaagatgaacctcta 5856082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 5856236 - 5856204
Alignment:
Q  8 gttcaagaggaaggcaagcactagaagcttcaa 40  Q
    |||||||||||||||||||||||||||||||||    
T  5856236 gttcaagaggaaggcaagcactagaagcttcaa 5856204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 481 - 521
Target Start/End: Complemental strand, 21315262 - 21315222
Alignment:
Q  481 ataaggtagacgctgatagggctgcccgtttgtagaactac 521  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  21315262 ataaggtagacgctgatagtgttgcccgtttgtagaactac 21315222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 26394167 - 26394211
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgaga 526  Q
    |||||||||| ||||||||| || |||||||||||||||||||||    
T  26394167 taaggtagacactgatagggttgtccgtttgtagaactaccgaga 26394211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 312
Target Start/End: Complemental strand, 14076478 - 14076240
Alignment:
Q  77 taccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaagtcttttattcagttat 174  Q
    ||||||| | |||||||||||||||   |||||||||||||| ||||| |||| || ||||||| |||||   |||||| ||||| |||  |||| ||||    
T  14076478 taccatgtgcaactaaatctttttacgctagggttctaagattaacctatattctggttgttggataatttatttaattgaaagt-tttatttcaattat 14076380  T
Q  175 tttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgat--ttagacacttatgta-gtgacagatcctaata 271  Q
    ||||| ||  ||||||  ||||| |||   | |||||||||||||||| ||||| |||||| ||||   ||| |||||| | | ||||| |  |||||||    
T  14076379 tttct-ttttctattttattttattgtcgggtgtaagatttgtctcctttgaagtataaccctgatacctaggcacttagggaggtgac-gtacctaata 14076282  T
Q  272 ttgatatttatatatgtc-taaccaggaagtaattaattagt 312  Q
     |||||||||||| |||| ||| |||||||||| ||||||||    
T  14076281 ctgatatttatatttgtcttaatcaggaagtaactaattagt 14076240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 17510293 - 17510250
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagct 104  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  17510293 gtaatttgtttttagttaccatatgtaactaaatctttttagct 17510250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 521
Target Start/End: Original strand, 25181921 - 25181956
Alignment:
Q  486 gtagacgctgatagggctgcccgtttgtagaactac 521  Q
    |||||||||||||||| |||||||||||||||||||    
T  25181921 gtagacgctgatagggttgcccgtttgtagaactac 25181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 34498699 - 34498612
Alignment:
Q  62 taatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    |||||||| ||||| ||| ||| |||| | |||||| |||| |||| |||||||||||||||| | |||  |||||||| ||||||||    
T  34498699 taatttgtctttagttactatgtgtaattgaatcttattaggttagagttctaagatgaacctatgtttattttgttggataattatt 34498612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 6886057 - 6885928
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtctttta 165  Q
    |||| ||||| |||||||||||||||| |  || |||  ||| ||||||||||||||  ||||||  |||||| | |||||||| | | || ||| ||||    
T  6886057 ttgtctttagttaccatgagtaactaattagttataggctagagttctaagatgaactcctatttattttgttcgataattatttaat-aatgtcgttta 6885959  T
Q  166 ttcagttattttctattcgctatttagtttt 196  Q
    || ||||||||| | ||| ||||||||||||    
T  6885958 tttagttattttatgttcactatttagtttt 6885928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 14271236 - 14271102
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaa-gtctttt 164  Q
    |||| ||||| ||||||| |||||||| |  || ||| |||  ||||||||||||||  ||||||  ||| |||| |||||||| | ||| | ||| |||    
T  14271236 ttgtctttagttaccatgtgtaactaagtagttataggttaaagttctaagatgaactcctatttaatttcttggataattatttaattatacgtcgttt 14271137  T
Q  165 attcagttattttctattcgctatttagttttact 199  Q
    ||| ||||||||||| || |||||| |||||||||    
T  14271136 atttagttattttctgttagctattcagttttact 14271102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 602 - 660
Target Start/End: Original strand, 26614849 - 26614907
Alignment:
Q  602 aaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagacccc 660  Q
    |||||||||||||||||||||| | |||| |||||||||   |||| ||||||||||||    
T  26614849 aaatttaggaactctaatttaagtatatgcttcaattacttttaagagagtaagacccc 26614907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 28275805 - 28275939
Alignment:
Q  66 ttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaa-gtctttt 164  Q
    |||| ||||| ||||||| |||||||| |  || ||| |||| ||| |||||| |||  ||||||  ||| |||| |||||||| | ||| | ||| |||    
T  28275805 ttgtatttagttaccatgtgtaactaagtagttataggttagagttataagattaactcctatttatttttttggataattatttaattatatgtcgttt 28275904  T
Q  165 attcagttattttctattcgctatttagttttact 199  Q
    ||| ||||||||| | |||||||||||||||||||    
T  28275905 atttagttattttattttcgctatttagttttact 28275939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 104; Significance: 3e-51; HSPs: 2)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 275 - 633
Target Start/End: Complemental strand, 4713 - 4349
Alignment:
Q  275 atatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagtactcaggggtgtgacata 373  Q
    |||||||||  |||||||||| |||||||||||||||| | ||||||||||||  |||| | ||| || | |||||| ||||||| ||||  ||  ||||    
T  4713 atatttatacctgtctaaccatgaagtaattaattagtaactagcgaaacaaaccgaaaacaagcataccttgatagaaagtacttagggaggtatcata 4614  T
Q  374 tctaatattgatgaatatctatttaaata---tagtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattct 470  Q
     |||||||| ||||| | || || |||     |||||||||||| ||||||||||||||| ||| ||||| ||||||| ||| |||| ||||| ||||||    
T  4613 cctaatattcatgaacaactgttgaaagcaggtagtaactagttagtaattaaggaaacaagtgacttcatgacttaaatcagcccaataacttcattct 4514  T
Q  471 tctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatgga 568  Q
     ||  |||||  |||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||  ||||||||||||| || ||||||   | ||    
T  4513 cctcgcaccttgataaggtagatgctaatagggctgcccgtgtgtagaactaccgagagggagagtgtgctatgtacttctaagatgcatagatgctaga 4414  T
Q  569 acctttaggaacattgggaagtcatacctttggaaatttaggaactctaatttaattttatgttt 633  Q
    |||||||| |||| | |  ||||||||||||||||||||| |||||  ||||||| |||||||||    
T  4413 acctttagtaacacttgctagtcatacctttggaaatttacgaacttcaatttaagtttatgttt 4349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 756 - 983
Target Start/End: Complemental strand, 2070 - 1842
Alignment:
Q  756 gtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttc 855  Q
    |||||||||||||| ||||||||||||| |||| | | |||||||||||||||||||||||||| |||||||||||||||| ||   ||||||||| |||    
T  2070 gtgcaacttgacaggtgattaggttatcacgtcccgaaaaactcatcacttagatagtctacttggaataattgaacttgacttgaatgttaattaattc 1971  T
Q  856 caac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgca 953  Q
    |||| ||| |||| ||||||||||||||||||||| |||||||||| ||| |||||| |||| |||||  || ||| ||||| |||||||||| ||   |    
T  1970 caacaaattaataaaggggattcaaagaatcctaatcgccactaactttctgcaatc-aaatcggtaactttgctccgttgcaaacagattaaattgcaa 1872  T
Q  954 aactttaaacccttatctctttatttattt 983  Q
    |||| ||||| |||||||||||||||||||    
T  1871 aactctaaacacttatctctttatttattt 1842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 90; Significance: 6e-43; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 482 - 659
Target Start/End: Original strand, 63 - 240
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacctttaggaaca 581  Q
    |||||||||| || |||||||| |||||||||||||||||||||| || ||||||  ||||||||||||| |||||||||  | |||| |||||||||||    
T  63 taaggtagacactaatagggcttcccgtttgtagaactaccgagagggggagtgtgctatgtacttctaagattcatagatgagggaaactttaggaaca 162  T
Q  582 ttgggaagtcatacctttggaaatttaggaactctaatttaattttatgtttcaattacccctaagcgagtaagaccc 659  Q
     ||||||||||||||| || ||||||||||| | |||||||  ||||||||||||||||| || || |||||||||||    
T  163 ctgggaagtcatacctatgaaaatttaggaattgtaatttatgtttatgtttcaattaccactgagtgagtaagaccc 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 757 - 904
Target Start/End: Original strand, 355 - 503
Alignment:
Q  757 tgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttcc 856  Q
    |||||||||| |||||||||||||||| |||| | || ||||  ||||||| || || ||| ||||||||||||| |||| ||  |||||||||| ||||    
T  355 tgcaacttgatagctgattaggttatcacgtcccgacgaacttgtcacttaaattgtatacgtagaataattgaatttgatttaactgttaattaattcc 454  T
Q  857 aac-aataaatataggggattcaaagaatcctaaccgccactaacattc 904  Q
    ||| ||  |||| |||||||||||||||||||||  ||| |||||||||    
T  455 aacaaaggaatagaggggattcaaagaatcctaagtgccgctaacattc 503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 8800 - 8669
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagt 159  Q
    ||||||||| ||||| || |||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||    
T  8800 gtaatttgtctttagttatcatgagtaactaaatctttttagactaaggttctaaggtgaacctctattttgtttgttggataattatttaatctaaagt 8701  T
Q  160 cttttattcagttattttctattcgctattta 191  Q
    | ||||||||||||||||||||||||||||||    
T  8700 catttattcagttattttctattcgctattta 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 13551 - 13660
Alignment:
Q  64 atttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtcttt 163  Q
    |||||| ||||| |||||| ||||| ||||||||| ||   ||||||| ||||||||||||||||||| |||||||| ||  | ||||||||||||| |     
T  13551 atttgtctttagttaccataagtaattaaatctttctaagctagggttataagatgaacctctattttatttgttggata--ttttaatttaaagtc-tc 13647  T
Q  164 tattcagttattt 176  Q
    |||||||||||||    
T  13648 tattcagttattt 13660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 61 - 541
Target Start/End: Original strand, 14534 - 15022
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaag 158  Q
    ||||||||| ||||| |||||||||||||||||||||||||   ||||||||||| |||||||||| || || ||||||  |||||   ||||||||| |    
T  14534 gtaatttgtctttagttaccatgagtaactaaatctttttaagctagggttctaatatgaacctctgttctggttgttgaataatttatttaatttaagg 14633  T
Q  159 tcttttattcagttattttctattcgctatttagttttactg-taatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgta-g 256  Q
    || |||||| | ||||||  ||||   |  |||||||||||| |  | ||||||||||||||| |||||||||||||| ||| |||| |||||| | | |    
T  14634 tc-tttatttatttatttattattatgttattagttttactgttgttacgtaagatttgtctcttctgaagcataaccctgacttaggcacttagggatg 14732  T
Q  257 tgacagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagc-tatcctgatagtaagt 355  Q
    |||||   ||||||||||  || ||||| ||| ||| ||||||||||||||||||| | ||| |||| |    ||||||||||  | ||||| |||||||    
T  14733 tgacattacctaatattg--atgtatatttgtttaatcaggaagtaattaattagtaactagggaaagatgccgaaagcgagcaaaccctgaaagtaagt 14830  T
Q  356 actcaggggtgtgacatatctaatattgatgaatatctatttaaat---atagtaactagttg-gtaattaaggaaacatgtgccttcacgacttaactc 451  Q
    ||| | ||  |||||||| |||||||||||| |||| |  | ||||     | | |||||||| ||||||||||||||||||| |||||| || ||| ||    
T  14831 acttatggaggtgacatacctaatattgatgcatatatgctaaaatcaggaattcactagttgagtaattaaggaaacatgtgacttcacaacctaaatc 14930  T
Q  452 aacccactaactccattcttctttcacct--ataaggtagacgctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattat 541  Q
    | ||   ||||| |  |||||||||||||   ||||||||| |||||||||| || | ||||||||||||| ||||| ||||||||| ||||    
T  14931 agccatgtaacttcgctcttctttcacctcggtaaggtagatgctgatagggatgactgtttgtagaactatcgagagggagagtgtgttat 15022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 873 - 952
Target Start/End: Original strand, 15344 - 15425
Alignment:
Q  873 gattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaactt-tctctgttgc-aacagattaactttgc 952  Q
    ||||| |||||||||||||| | ||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||||||||    
T  15344 gattcgaagaatcctaaccgtcgctaacattctgcaatcaaaacaggtaaacttcgctctgttgcaaacagattaactttgc 15425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 756 - 914
Target Start/End: Complemental strand, 19449 - 19290
Alignment:
Q  756 gtgcaacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttc 855  Q
    ||||||||||| |||||||||||||||| |||  |||||||||||||||||| ||||||||||||||| |||| ||||||| ||   ||||| ||| ||     
T  19449 gtgcaacttgagagctgattaggttatcacgttccaacaaactcatcacttaaatagtctacttagaacaatttaacttgacttgaatgttatttaattt 19350  T
Q  856 caac-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaa 914  Q
    |||| |||||||| ||||||||||||||||| |||||||| ||||||||  |||||||||    
T  19349 caacaaataaatagaggggattcaaagaatcataaccgccgctaacattttgcaatcaaa 19290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 8e-30; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 759 - 983
Target Start/End: Original strand, 18503 - 18729
Alignment:
Q  759 caacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaa 858  Q
    |||||||| ||||||||| ||||||  ||| |||| ||||||||||||| ||||||||||||||||||||||||||||  |   ||||| ||| || |||    
T  18503 caacttgagagctgattaagttatcatgtcccaacgaactcatcacttaaatagtctacttagaataattgaacttgacgtgaatgttatttaatttcaa 18602  T
Q  859 c-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgcaaa 955  Q
    | |||||||| || || ||||||||||| ||| |||| ||||||||| |||||| ||| | |||||||||  |||||||| |||||||||| ||   |||    
T  18603 caaataaatagagtgggttcaaagaatcataatcgccgctaacattctgcaatc-aaacatgtaaactttgttctgttgcaaacagattaaattgcaaaa 18701  T
Q  956 ctttaaacccttatctctttatttattt 983  Q
    || ||||||||||| | |||||||||||    
T  18702 ctctaaacccttatatatttatttattt 18729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 759 - 983
Target Start/End: Original strand, 222796 - 223022
Alignment:
Q  759 caacttgacagctgattaggttatcccgtcacaacaaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaa 858  Q
    |||||||| ||||||||| ||||||  ||| |||| ||||||||||||| ||||||||||||||||||||||||||||  |   | ||| ||| || |||    
T  222796 caacttgagagctgattaagttatcatgtcccaacgaactcatcacttaaatagtctacttagaataattgaacttgacgtgaattttatttaatttcaa 222895  T
Q  859 c-aataaatataggggattcaaagaatcctaaccgccactaacattccgcaatcaaaataggtaaacttt-ctctgttgc-aacagattaactttgcaaa 955  Q
    | |||||||| ||| | ||||||||||| |||||||| ||||||||| |||||| ||| | |||||||||  ||| |||| |||||||||| ||   |||    
T  222896 caaataaatagaggaggttcaaagaatcataaccgccgctaacattctgcaatc-aaacatgtaaactttgttctattgcaaacagattaaattgcaaaa 222994  T
Q  956 ctttaaacccttatctctttatttattt 983  Q
    || ||||||||||| | |||||||||||    
T  222995 ctctaaacccttatatatttatttattt 223022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 10776 - 10891
Alignment:
Q  63 aatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta--ttaatttaaagtc 160  Q
    ||||||| ||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| || |||  |||||||||| ||    
T  10776 aatttgtctttagttaccatgagtaactaaatcttttttggatagggttctaagatgaacctctattttgtttgttggatatttaatttaatttaaattc 10875  T
Q  161 ttttattcagttatttt 177  Q
     ||||||||||||||||    
T  10876 -tttattcagttatttt 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 1e-22; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 404 - 536
Target Start/End: Original strand, 183875 - 184009
Alignment:
Q  404 agtaactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct--ataaggtagacgctgataggg 501  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||| |||||||||| | ||  |||||   ||||  ||||| ||||||||    
T  183875 agtaactagttggtaattaaggaaacaagtgacttcatgacttaaatcagcccagtaactccattttcctcacaccttagtaagaaagacgttgataggg 183974  T
Q  502 ctgcccgtttgtagaactaccgagaaggagagtgt 536  Q
    ||||| |||| |||||||||||||| |||||||||    
T  183975 ctgcctgtttatagaactaccgagagggagagtgt 184009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 61 - 333
Target Start/End: Complemental strand, 27530 - 27275
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattattaatttaaagtc 160  Q
    ||||||||| ||||  ||||||  |||||||||| |||||||  ||||||||||||||||||||||||| || |||||||   |  ||| ||||||||||    
T  27530 gtaatttgtctttaattaccatatgtaactaaatatttttaggctagggttctaagatgaacctctattctggttgttgg---agaatttatttaaagtc 27434  T
Q  161 ttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgta-gtga 259  Q
     |||||| |||              ||||||||||||||||   | ||||||||||||||||| ||||||||||| |||  ||| |||||| | | ||||    
T  27433 -tttatttagt--------------tatttagttttactgtcgcgtgtaagatttgtctcctcagaagcataaccctgacataggcacttagggaggtga 27349  T
Q  260 cagatcctaatattgatatttatatatgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaa 333  Q
    ||   |||||||||||| | |||||||||||||  |||||||||||||||||| | |||  |||||| ||||||    
T  27348 cattacctaatattgatgtatatatatgtctaattaggaagtaattaattagtaactaggaaaacaagttgaaa 27275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 183669 - 183777
Alignment:
Q  148 ttaatttaaagtcttttattcagttattttctattcgctatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagaca 247  Q
    ||||||||||||| |||||||| ||||||| | |||| ||||||||||||||||| ||||||| ||||| ||||  |||||||||||| || ||||  ||    
T  183669 ttaatttaaagtcgtttattcaattattttatgttcgttatttagttttactgtagtgcgtaaaatttgcctccattgaagcataaccctggtttatgca 183768  T
Q  248 cttatgtag 256  Q
    |||| ||||    
T  183769 cttaggtag 183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 186 - 587
Target Start/End: Complemental strand, 27423 - 27009
Alignment:
Q  186 tatttagttttactgtaatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgtag-tgacagatcctaatattgatatttatat 284  Q
    ||||||||||||||||   | ||||||||||||||||| ||||||||||| |||  ||| |||||| | || |||||   |||||||||||| | |||||    
T  27423 tatttagttttactgtcgcgtgtaagatttgtctcctcagaagcataaccctgacataggcacttagggaggtgacattacctaatattgatgtatatat 27324  T
Q  285 atgtctaaccaggaagtaattaattagtcattagcgaaacaaattgaaagcgagctatcctgatagtaag-tactcaggggtgtgacatatctaatattg 383  Q
    ||||||||  |||||||||||||||||| | |||  |||||| ||||||  |    | |||||||| ||| |||| ||||  |||||||| |||||||||    
T  27323 atgtctaattaggaagtaattaattagtaactaggaaaacaagttgaaaagggcgaaccctgatagaaaggtacttagggaggtgacatacctaatattg 27224  T
Q  384 atgaatatctatttaaatatag---taactagttggtaattaaggaaacatgtgccttcacgacttaactcaacccactaactccattcttctttcacct 480  Q
    | | |||| |    ||||   |   ||||||||| ||||||||||||||  ||| |||  ||| |||| ||   ||| |||||||| |||||||||||||    
T  27223 acgcatatatgccaaaatcaggaaataactagttagtaattaaggaaacgggtgactttgcgatttaaatctgtccaataactccactcttctttcacct 27124  T
Q  481 a--taaggtagacg------ctgatagggctgcccgtttgtagaactaccgagaaggagagtgtattatgtacttctaaaattcatagacaatggaacct 572  Q
       ||||||||| |      ||||||||||| ||| |||||| | ||||||||| ||||||||| |||||  ||||||| |||| ||||  |  | ||||    
T  27123 tggtaaggtagatgttgatactgatagggctacccttttgtaaagctaccgagagggagagtgtgttatgggcttctaagattcctagatgagcggacct 27024  T
Q  573 ttaggaacattggga 587  Q
    ||| |||||||||||    
T  27023 ttaagaacattggga 27009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 244528 - 244616
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaattatt 149  Q
    ||||||||| ||||| ||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||  |||||||| ||||||||    
T  244528 gtaatttgtgtttagttaccatgtgtaactaaatcttattagattatggttctaagatgaacctctatttattttgttggataattatt 244616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 53881 - 53816
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  53881 gtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 53816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 22371 - 22311
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaa 121  Q
    ||||||||||||||  ||||||| |||||||||| ||||||| |||| |||||||||||||    
T  22371 gtaatttgtttttaattaccatgtgtaactaaatatttttaggttagagttctaagatgaa 22311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1156 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 649 - 586
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacct 124  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  649 gtaatttgtttttagttaccatgtgtaactaaatctttttagtttagagttctaagatgaacct 586  T

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Target: scaffold0085 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 23419 - 23340
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgg 140  Q
    ||||||||| ||||| |||||||||| |||||  ||||||||  ||||||||||||||||||||||||| ||||||||||    
T  23419 gtaatttgtctttagttaccatgagtgactaaccctttttaggctagggttctaagatgaacctctattatgtttgttgg 23340  T

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Target: scaffold0360 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 71 - 312
Target Start/End: Original strand, 17205 - 17447
Alignment:
Q  71 tttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatt--attaatttaaagtcttttattc 168  Q
    ||||| ||||||||||||| | ||||||||||  |||  || ||||||||||||||||| || ||||||| || ||   ||||||||||||| ||||||     
T  17205 tttagttaccatgagtaaccacatctttttaggctagatttttaagatgaacctctattctggttgttggatattttatttaatttaaagtc-tttattt 17303  T
Q  169 agttattttctatt-cgctatttagttttactg-taatgcgtaagatttgtctcctctgaagcataaccttgatttagacacttatgta-gtgacagatc 265  Q
    ||||||||  ||||  ||||  ||||||||||| |  ||||||||||||||||||||| |||||| |||| || |||| |||||| | | ||||||   |    
T  17304 agttatttattattatgcta-ctagttttactgttgttgcgtaagatttgtctcctctaaagcattacctagacttaggcacttagggaggtgacattac 17402  T
Q  266 ctaatattgatatttatatatgtctaaccaggaagtaattaattagt 312  Q
    |||||||||  ||  |||| ||||||| || ||||||||||||||||    
T  17403 ctaatattg--atgaatatctgtctaatcatgaagtaattaattagt 17447  T

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Target: scaffold0054 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 73061 - 72993
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctctatt 129  Q
    ||||||| ||||||| ||||||| |||||||| ||||||||| |||| |||||||||||||||||||||    
T  73061 gtaatttttttttagttaccatgtgtaactaattctttttaggttagagttctaagatgaacctctatt 72993  T

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Target: scaffold0034 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 81113 - 81056
Alignment:
Q  69 tttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  81113 tttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctct 81056  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 40661 - 40573
Alignment:
Q  80 catgagtaactaaatctttttagcttagggttctaagatgaacctctattttgtttgttgggtaatta-ttaatttaaagtcttttatt 167  Q
    |||| ||||||| || ||| ||| ||||||||||||||| |||||||||||| |||||||| |||||| ||||||||| ||| ||||||    
T  40661 catgtgtaactagatatttataggttagggttctaagataaacctctattttttttgttggataattatttaatttaatgtcgtttatt 40573  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 40243 - 40205
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaacta 520  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  40243 taaggtagacgctgatagggttgcccatttgtagaacta 40205  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 102387 - 102452
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaacctct 126  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||  ||| |||| |||||||||||||    
T  102387 gtaatttgtttttagttaccatgtgtaactaaaactttttaggctagagttcaaagatgaacctct 102452  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 4223 - 4167
Alignment:
Q  65 tttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagatgaa 121  Q
    ||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||||||    
T  4223 tttgtttttagttaccatgtgtaactgaatctttttaggttagagttctaagatgaa 4167  T

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Target: scaffold0653 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 794 - 975
Target Start/End: Original strand, 4284 - 4465
Alignment:
Q  794 aaactcatcacttagatagtctacttagaataattgaacttgaattttctgttaattatttccaacaa-taaatataggggattcaaagaatcctaaccg 892  Q
    ||||||||| |||||||||||||||| ||| || | |||  || ||  || ||||||| ||||| ||| ||||||  ||||||||||||||||||||| |    
T  4284 aaactcatcccttagatagtctacttcgaacaactaaacgcgacttgactattaattaattccagcaaataaataggggggattcaaagaatcctaactg 4383  T
Q  893 ccactaacattccgcaatcaaaataggtaaactttctctgttgc-aacagattaactttgcaaactttaaacccttatctcttt 975  Q
    |  |||||||||  ||| ||||| | | | |||| |||| |||| ||||||||||||||| ||||| ||||| |||| ||||||    
T  4384 ctgctaacattcaccaa-caaaaca-gaatacttgctctattgcaaacagattaactttgaaaactctaaacacttaactcttt 4465  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 16653 - 16596
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaagat 118  Q
    ||||||||||||||| ||||||| |||||||| |||||| || |||| ||||||||||    
T  16653 gtaatttgtttttagttaccatgtgtaactaattcttttgaggttagagttctaagat 16596  T

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Target: scaffold0622 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 1120 - 1164
Alignment:
Q  482 taaggtagacgctgatagggctgcccgtttgtagaactaccgaga 526  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||    
T  1120 taaggtggacgctgatagggatgcccgtttgtagaactactgaga 1164  T

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Target: scaffold0451 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 5120 - 5065
Alignment:
Q  61 gtaatttgtttttagctaccatgagtaactaaatctttttagcttagggttctaag 116  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| |||| ||| ||||    
T  5120 gtaatttgtttttagttaccatgtgtaactaattctttttaggttagtgttgtaag 5065  T

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