View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5411-Insertion-3 (Length: 1018)

Name: NF5411-Insertion-3
Description: NF5411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5411-Insertion-3
NF5411-Insertion-3
[»] chr3 (32 HSPs)
chr3 (8-986)||(47584223-47585202)
chr3 (724-819)||(38462205-38462300)
chr3 (739-834)||(43116494-43116589)
chr3 (706-819)||(25964366-25964480)
chr3 (631-679)||(22667491-22667539)
chr3 (631-679)||(22724130-22724178)
chr3 (705-797)||(24887315-24887407)
chr3 (741-797)||(49586984-49587040)
chr3 (743-805)||(2128321-2128383)
chr3 (734-804)||(20192667-20192737)
chr3 (639-681)||(27294432-27294474)
chr3 (791-853)||(29094271-29094333)
chr3 (738-820)||(32703061-32703143)
chr3 (639-693)||(50015960-50016014)
chr3 (734-803)||(1395611-1395680)
chr3 (649-694)||(1810050-1810095)
chr3 (626-694)||(1395712-1395780)
chr3 (639-683)||(25699140-25699184)
chr3 (764-819)||(36445656-36445711)
chr3 (753-804)||(40122832-40122883)
chr3 (632-683)||(45590735-45590786)
chr3 (629-683)||(11041158-11041212)
chr3 (631-673)||(21872229-21872271)
chr3 (739-805)||(24605082-24605148)
chr3 (761-819)||(41028939-41028997)
chr3 (761-818)||(905058-905115)
chr3 (626-683)||(2081012-2081069)
chr3 (739-804)||(8007761-8007826)
chr3 (704-782)||(33965520-33965600)
chr3 (764-797)||(36646473-36646506)
chr3 (631-668)||(39971396-39971433)
chr3 (739-792)||(42038940-42038993)
[»] chr5 (30 HSPs)
chr5 (707-861)||(39257421-39257575)
chr5 (631-689)||(12407664-12407722)
chr5 (74-159)||(5268603-5268688)
chr5 (762-837)||(29115302-29115377)
chr5 (709-795)||(14295454-14295540)
chr5 (626-694)||(8090009-8090077)
chr5 (739-815)||(35135728-35135804)
chr5 (753-804)||(7096207-7096258)
chr5 (753-819)||(20982215-20982281)
chr5 (631-689)||(36639600-36639658)
chr5 (768-805)||(10296371-10296408)
chr5 (739-804)||(12407727-12407792)
chr5 (628-689)||(14714774-14714835)
chr5 (760-805)||(21782656-21782701)
chr5 (631-683)||(10303880-10303932)
chr5 (766-869)||(26516171-26516275)
chr5 (739-819)||(36539670-36539750)
chr5 (631-694)||(37611149-37611212)
chr5 (631-694)||(37787879-37787942)
chr5 (704-774)||(12975316-12975386)
chr5 (629-683)||(29336714-29336768)
chr5 (764-797)||(465900-465933)
chr5 (743-819)||(3237023-3237100)
chr5 (639-672)||(3504835-3504868)
chr5 (626-683)||(4855779-4855836)
chr5 (631-668)||(5377131-5377168)
chr5 (743-816)||(9860868-9860941)
chr5 (626-683)||(21782585-21782642)
chr5 (759-804)||(37063160-37063205)
chr5 (760-837)||(39128545-39128622)
[»] chr8 (30 HSPs)
chr8 (759-853)||(34563140-34563234)
chr8 (626-782)||(4763879-4764035)
chr8 (724-804)||(7646145-7646225)
chr8 (626-682)||(14926911-14926967)
chr8 (764-861)||(4558679-4558777)
chr8 (739-853)||(12972746-12972860)
chr8 (631-672)||(26499811-26499852)
chr8 (739-804)||(42597340-42597405)
chr8 (631-683)||(24326115-24326167)
chr8 (737-797)||(34788491-34788551)
chr8 (626-665)||(4560604-4560643)
chr8 (631-682)||(9700086-9700137)
chr8 (742-792)||(11119067-11119118)
chr8 (639-678)||(12833449-12833488)
chr8 (760-819)||(14482126-14482185)
chr8 (618-673)||(37353093-37353148)
chr8 (626-668)||(27465450-27465492)
chr8 (640-682)||(28769282-28769324)
chr8 (651-689)||(33940096-33940134)
chr8 (759-797)||(34522142-34522180)
chr8 (753-819)||(35534941-35535007)
chr8 (739-837)||(35869743-35869841)
chr8 (753-819)||(40728498-40728564)
chr8 (641-694)||(2487952-2488005)
chr8 (740-797)||(2698739-2698796)
chr8 (626-683)||(10437967-10438024)
chr8 (759-804)||(12224985-12225030)
chr8 (626-679)||(12361282-12361335)
chr8 (759-804)||(26215435-26215480)
chr8 (638-683)||(26479869-26479914)
[»] chr4 (46 HSPs)
chr4 (631-713)||(2996627-2996709)
chr4 (626-683)||(46860002-46860059)
chr4 (631-683)||(29375987-29376039)
chr4 (626-689)||(33534098-33534161)
chr4 (759-852)||(36734784-36734877)
chr4 (704-792)||(18628574-18628662)
chr4 (739-819)||(54325103-54325183)
chr4 (631-694)||(18628487-18628550)
chr4 (734-804)||(30338653-30338723)
chr4 (759-805)||(51044545-51044591)
chr4 (618-667)||(32071963-32072012)
chr4 (617-678)||(47146033-47146094)
chr4 (753-820)||(4191662-4191730)
chr4 (741-793)||(20936070-20936122)
chr4 (635-679)||(22239490-22239534)
chr4 (766-850)||(35727126-35727210)
chr4 (760-819)||(3249801-3249860)
chr4 (631-682)||(18512449-18512500)
chr4 (739-802)||(21953214-21953277)
chr4 (762-853)||(51555956-51556047)
chr4 (639-689)||(3549497-3549547)
chr4 (651-689)||(4071956-4071994)
chr4 (764-802)||(17884009-17884047)
chr4 (759-797)||(21952521-21952559)
chr4 (739-797)||(21952907-21952965)
chr4 (743-797)||(22684586-22684640)
chr4 (739-837)||(24443944-24444042)
chr4 (739-797)||(27623581-27623639)
chr4 (632-682)||(28232630-28232680)
chr4 (760-802)||(39438623-39438665)
chr4 (735-797)||(43372031-43372093)
chr4 (739-805)||(46013366-46013432)
chr4 (747-805)||(52645823-52645881)
chr4 (626-684)||(54277252-54277310)
chr4 (626-711)||(6428074-6428159)
chr4 (618-731)||(7730636-7730748)
chr4 (640-689)||(22471352-22471401)
chr4 (739-820)||(30024623-30024704)
chr4 (759-804)||(32724058-32724103)
chr4 (760-805)||(35958593-35958638)
chr4 (626-683)||(39931303-39931360)
chr4 (753-814)||(46019706-46019767)
chr4 (759-804)||(47970257-47970302)
chr4 (760-819)||(52735049-52735105)
chr4 (760-817)||(54986348-54986404)
chr4 (632-681)||(56007765-56007814)
[»] chr7 (35 HSPs)
chr7 (704-804)||(28165030-28165130)
chr7 (759-861)||(47003969-47004071)
chr7 (626-689)||(44151405-44151468)
chr7 (704-862)||(22759064-22759225)
chr7 (650-863)||(28340374-28340587)
chr7 (626-682)||(37064143-37064199)
chr7 (739-819)||(49060464-49060544)
chr7 (724-803)||(5006560-5006639)
chr7 (626-713)||(13960653-13960739)
chr7 (734-805)||(23918895-23918966)
chr7 (631-713)||(24909842-24909924)
chr7 (631-689)||(33894705-33894763)
chr7 (633-694)||(25670522-25670583)
chr7 (739-836)||(27481360-27481457)
chr7 (632-689)||(34754745-34754802)
chr7 (753-793)||(2999141-2999181)
chr7 (753-797)||(3802219-3802263)
chr7 (631-683)||(30751603-30751655)
chr7 (739-819)||(35536031-35536111)
chr7 (631-683)||(36598290-36598342)
chr7 (739-819)||(39551614-39551694)
chr7 (631-683)||(40428639-40428691)
chr7 (753-804)||(5276163-5276214)
chr7 (753-820)||(7244625-7244692)
chr7 (631-678)||(8094395-8094442)
chr7 (753-796)||(30160970-30161013)
chr7 (759-805)||(27626210-27626256)
chr7 (759-805)||(35808990-35809036)
chr7 (631-689)||(43854975-43855033)
chr7 (631-688)||(24895535-24895592)
chr7 (631-668)||(29363607-29363644)
chr7 (759-804)||(31341133-31341178)
chr7 (743-804)||(33894562-33894622)
chr7 (760-797)||(42656461-42656498)
chr7 (626-683)||(47041968-47042025)
[»] chr2 (29 HSPs)
chr2 (726-820)||(29430679-29430772)
chr2 (763-816)||(13864577-13864630)
chr2 (741-820)||(14209200-14209279)
chr2 (629-683)||(13869040-13869094)
chr2 (725-862)||(13869147-13869285)
chr2 (762-820)||(40672885-40672943)
chr2 (742-819)||(17952770-17952847)
chr2 (760-853)||(31461328-31461421)
chr2 (631-668)||(40759259-40759296)
chr2 (704-804)||(5133711-5133811)
chr2 (736-804)||(18962101-18962169)
chr2 (632-684)||(35486000-35486052)
chr2 (626-689)||(8017512-8017575)
chr2 (760-835)||(17221627-17221702)
chr2 (626-689)||(35809945-35810008)
chr2 (646-689)||(36677730-36677773)
chr2 (631-689)||(13866956-13867014)
chr2 (739-805)||(30537593-30537659)
chr2 (761-862)||(33197327-33197429)
chr2 (739-781)||(33942112-33942154)
chr2 (706-780)||(36863658-36863732)
chr2 (745-794)||(10769690-10769739)
chr2 (664-717)||(12785913-12785966)
chr2 (632-689)||(13234584-13234641)
chr2 (626-683)||(22878182-22878239)
chr2 (739-796)||(31740025-31740082)
chr2 (760-797)||(32098395-32098432)
chr2 (704-820)||(35329849-35329966)
chr2 (760-805)||(38239638-38239683)
[»] scaffold0590 (1 HSPs)
scaffold0590 (759-835)||(1160-1236)
[»] scaffold0275 (1 HSPs)
scaffold0275 (759-835)||(2739-2815)
[»] chr1 (37 HSPs)
chr1 (736-820)||(44032062-44032146)
chr1 (631-688)||(4868478-4868535)
chr1 (724-805)||(48830127-48830208)
chr1 (626-694)||(4033946-4034014)
chr1 (619-683)||(16980887-16980951)
chr1 (701-804)||(23544667-23544771)
chr1 (759-819)||(23895260-23895320)
chr1 (626-689)||(34536236-34536299)
chr1 (720-835)||(36602698-36602813)
chr1 (631-689)||(1393022-1393080)
chr1 (739-805)||(15360832-15360898)
chr1 (626-688)||(27807194-27807256)
chr1 (734-788)||(34179933-34179987)
chr1 (626-675)||(24460330-24460379)
chr1 (724-797)||(49517016-49517089)
chr1 (626-694)||(4757411-4757479)
chr1 (759-803)||(42351992-42352036)
chr1 (653-689)||(49173463-49173499)
chr1 (724-795)||(17631152-17631223)
chr1 (650-689)||(43371844-43371883)
chr1 (739-802)||(45999354-45999417)
chr1 (761-804)||(50319231-50319274)
chr1 (617-683)||(5157156-5157222)
chr1 (778-863)||(26679153-26679239)
chr1 (631-689)||(28837287-28837344)
chr1 (734-796)||(30259548-30259610)
chr1 (631-689)||(49691987-49692044)
chr1 (707-804)||(4549576-4549673)
chr1 (618-667)||(11217935-11217984)
chr1 (626-683)||(23373242-23373299)
chr1 (760-797)||(26293193-26293230)
chr1 (626-671)||(29793627-29793672)
chr1 (706-795)||(31517773-31517862)
chr1 (631-668)||(33339433-33339470)
chr1 (618-679)||(34422095-34422156)
chr1 (760-805)||(36151592-36151637)
chr1 (631-668)||(44815237-44815274)
[»] chr6 (23 HSPs)
chr6 (626-681)||(3180998-3181053)
chr6 (725-804)||(29274281-29274360)
chr6 (710-853)||(3181105-3181251)
chr6 (707-797)||(1402942-1403032)
chr6 (724-797)||(2027457-2027530)
chr6 (753-846)||(31672548-31672641)
chr6 (644-689)||(32171330-32171375)
chr6 (753-840)||(1497883-1497971)
chr6 (631-683)||(8420131-8420183)
chr6 (754-805)||(4420555-4420606)
chr6 (745-863)||(9027456-9027575)
chr6 (652-683)||(19752761-19752792)
chr6 (753-849)||(29957990-29958087)
chr6 (734-805)||(33500542-33500613)
chr6 (634-680)||(10031819-10031865)
chr6 (760-814)||(24836286-24836340)
chr6 (704-806)||(33787776-33787878)
chr6 (724-797)||(281899-281972)
chr6 (707-836)||(2206497-2206626)
chr6 (759-804)||(2514641-2514686)
chr6 (739-804)||(10452426-10452491)
chr6 (739-804)||(32206086-32206151)
chr6 (638-683)||(34538159-34538204)
[»] scaffold0024 (1 HSPs)
scaffold0024 (739-863)||(27455-27580)
[»] scaffold0428 (1 HSPs)
scaffold0428 (631-673)||(4000-4042)


Alignment Details
Target: chr3 (Bit Score: 853; Significance: 0; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 853; E-Value: 0
Query Start/End: Original strand, 8 - 986
Target Start/End: Complemental strand, 47585202 - 47584223
Alignment:
Q  8 aaaacaatagtagcaactcccattaatgttatgaagcctaagtagaggtaacaaaagaaagggttgcacataaatgagtaatatacaggaggataaaatg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47585202 aaaacaatagtagcaactcccattaatgttatgaagcctaagtagaggtaacaaaagaaagggttgcacataaatgagtaatatacaggaggataaaatg 47585103  T
Q  108 aagttgcaatcaatgcagcaattccagcatagtcaattcttagcataatgtaggaaaggcgttgcgagtgacaagctaagaggtggcatgtgctgctggc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47585102 aagttgcaatcaatgcagcaattccagcatagtcaattcttagcataatgtaggaaaggcgttgcgagtggcaagctaagaggtggcatgtgctgctggc 47585003  T
Q  208 taataaacagaacatagctcctcctaagaaggcataaaatggccaccttgtaattggtgggactattgaaggagatacaaaatccattgtttcgtctttc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47585002 taataaacagaacatagctcctcctaagaaggcataaaatggccaccttgtaattggtgggactattgaaggagatacaaaatccattgtttcgtctttc 47584903  T
Q  308 aaaccattctgtaatcaacaatgtagcagctgttagaagccaaattctattaatctcaatcaatattttcactgtctagaataacacagtgcaaatttta 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47584902 aaaccattctgtaatcaacaatgtagcagctgttagaagccaaattctattaatctcaatcaatattttcattgtctagaataacacagtgcaaatttta 47584803  T
Q  408 caacttactgagatacatgtcttgtataacattatataaaagcatagtcgaaatgtatgaaaatgctttacaaagaaaatactctgctattgttatatat 507  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  47584802 caacttactgaaatacatgtcttgtataacattatataaaagcatagtcgaaatgtatgaaaatgctttacaaagaaaatactctgctattgttttat-- 47584705  T
Q  508 atgtaatatgtataacccattaagtgaccttttataacttttgaaatataaatttgtatttgaggaagaaaaatactagtgaccaaaatatacaagttct 607  Q
         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47584704 -----atatgtataacccattaagtgaccttctataacttttgaaatataaatttgtatttgaggaagaaaaatactagtgaccaaaatatacaagttct 47584610  T
Q  608 cttataaccatttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtcca 707  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  47584609 cttataaccatttggaccgactcatttgaacctatctattgacataagcacttgtgagactatttgagagagcttatgaaaagaactaacaaaatgtcca 47584510  T
Q  708 taagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaac 807  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47584509 taagctctccaagattgcttatgaggaaagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaac 47584410  T
Q  808 cttatatgataaaagttaatgctataagcgttttattaagctg-ttttccaaacaggcccaaagaatg-aatcga-ttacgctttctgaaatcagataga 904  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  47584409 cttatatgataaaagttaatgctataagcgttttattaagctgtttttccaaacaggcccgaagaatgaaatcgatttacgctttctgaaatcagataga 47584310  T
Q  905 cttttgatagtcc-aagtacataacaa-ttgagaac-aatgaaaag-atcatatatgatactccatg-agtgggatgagacttacta 986  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  47584309 cttttgatagtccaaagtacataacaatttgagaacaaatgaaaagaatcatatatgatactccatgaagtgggatgagacttacta 47584223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 724 - 819
Target Start/End: Complemental strand, 38462300 - 38462205
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||||  |||||||||||| || || ||||| |||||||||||||||| ||||||  |||||||||||||| | |||||  ||||||||||||    
T  38462300 gcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataa 38462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 739 - 834
Target Start/End: Original strand, 43116494 - 43116589
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataa 834  Q
    |||||||||| || ||||  |||||| || |||||| ||||||| ||||||||||||||||||||||  ||| |||||||||  || |||||||||    
T  43116494 ttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataa 43116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 706 - 819
Target Start/End: Complemental strand, 25964480 - 25964366
Alignment:
Q  706 cataagctctccgagattgcttatgaggacagtttatagcttaca-ttaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||| |||| ||| ||||||||  |||| |||||||||||| ||| ||| |||| | ||||||||| ||||||| ||| |||||||||| ||| ||    
T  25964480 cataagctttccgggatagcttatgaaaacagcttatagcttacaattacaactgtttcaatttattttatcttttgttataaaaatagcttatacaaaa 25964381  T
Q  805 aaccttatatgataa 819  Q
     | ||||||||||||    
T  25964380 gaacttatatgataa 25964366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 631 - 679
Target Start/End: Complemental strand, 22667539 - 22667491
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagag 679  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  22667539 atttgagcttatctactgacataagcacttgtgagactgtttgagagag 22667491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 631 - 679
Target Start/End: Complemental strand, 22724178 - 22724130
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagag 679  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  22724178 atttgagcttatctactgacataagcacttgtgagactgtttgagagag 22724130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 797
Target Start/End: Original strand, 24887315 - 24887407
Alignment:
Q  705 ccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||||||  ||| ||||||||  |||| || ||||||| || || || |||||||||||||||| || |||| ||||||||||||||    
T  24887315 ccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaatagctta 24887407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 797
Target Start/End: Original strand, 49586984 - 49587040
Alignment:
Q  741 atagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||| || ||||| |||||||||||||||| ||||||| ||||||||||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagctta 49587040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 743 - 805
Target Start/End: Original strand, 2128321 - 2128383
Alignment:
Q  743 agcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||| ||||||  ||| ||||||||||| ||||||| |||||||||||||| |||||||    
T  2128321 agcttacagtaaaacaatttaactttattttatcttttgttatagaaatagcttatacataaa 2128383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 734 - 804
Target Start/End: Original strand, 20192667 - 20192737
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||| |||||| ||| || ||||| |||||||||||||||| ||||||| ||| |||||||||| ||||||    
T  20192667 acagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataa 20192737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 27294474 - 27294432
Alignment:
Q  639 ttatctattgacataagcacttgtgagactatttgagagagct 681  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  27294474 ttatctattgtcataagcacttgtgagactgtttgagagagct 27294432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 791 - 853
Target Start/End: Complemental strand, 29094333 - 29094271
Alignment:
Q  791 tagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt 853  Q
    ||||||| |||||||  ||||||||||||  ||| ||||||||||||||| ||||||||||||    
T  29094333 tagcttatacataaacacttatatgataagtgtttatgctataagcgtttaattaagctgttt 29094271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 738 - 820
Target Start/End: Complemental strand, 32703143 - 32703061
Alignment:
Q  738 tttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    ||||||||||| || |||||  ||||| ||||||||| ||||| | |||||||||||||| |||||||   ||||||||||||    
T  32703143 tttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataaa 32703061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 639 - 693
Target Start/End: Complemental strand, 50016014 - 50015960
Alignment:
Q  639 ttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaac 693  Q
    |||||||||| ||||| ||||||||||||| ||||||||| |||| |||||||||    
T  50016014 ttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaac 50015960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 803
Target Start/End: Complemental strand, 1395680 - 1395611
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    |||||| |||||||| || ||||   ||||||||||||||| ||||||| |||||||||||||| |||||    
T  1395680 acagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 694
Target Start/End: Complemental strand, 1810095 - 1810050
Alignment:
Q  649 acataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  1810095 acataatcacttgtgagactatttgagagagcttacggaaacaact 1810050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 626 - 694
Target Start/End: Complemental strand, 1395780 - 1395712
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    |||| |||||| |||||||  |||| |||||||||| |||||| ||||||||||||||| |||| ||||    
T  1395780 gacttatttgagcttatcttatgacgtaagcacttgcgagactgtttgagagagcttacaaaaacaact 1395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 639 - 683
Target Start/End: Original strand, 25699140 - 25699184
Alignment:
Q  639 ttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||||||||||||||||| |||||||  |||||||||||||    
T  25699140 ttatctattgacataagcacttatgagacttcttgagagagctta 25699184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 819
Target Start/End: Complemental strand, 36445711 - 36445656
Alignment:
Q  764 actttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||||||  ||||||| |||||||||||||| |||||||| || |||||||||    
T  36445711 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 36445656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 804
Target Start/End: Original strand, 40122832 - 40122883
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    ||||| |||||||||||||||| ||||||| || ||||||||||| ||||||    
T  40122832 aaaacagtttgactttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 683
Target Start/End: Complemental strand, 45590786 - 45590735
Alignment:
Q  632 tttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||||||||| |  ||||||||||||||||||| |||| |||||||||    
T  45590786 tttgaacttatctactagcataagcacttgtgagactgtttgggagagctta 45590735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 629 - 683
Target Start/End: Original strand, 11041158 - 11041212
Alignment:
Q  629 tcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||| |||||||| | | ||||||||||||| |||| ||||||||||||||    
T  11041158 tcatttgagcttatctactaagataagcacttgtgggactgtttgagagagctta 11041212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 673
Target Start/End: Original strand, 21872229 - 21872271
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttg 673  Q
    |||||| |||||||| |||||||||||||||||||||| ||||    
T  21872229 atttgatcttatctactgacataagcacttgtgagactgtttg 21872271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 805
Target Start/End: Original strand, 24605082 - 24605148
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||| |||||||  ||| ||||||||||||||| | ||||||| ||||||||| |||| |||||||    
T  24605082 ttataacttacatgcaaatggtttgactttatttcatcttttgttatagaaataacttatacataaa 24605148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 819
Target Start/End: Original strand, 41028939 - 41028997
Alignment:
Q  761 ttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    |||||||||||||  ||||||| |||||||||||||| ||||||   ||||||||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataa 41028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 905058 - 905115
Alignment:
Q  761 ttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgata 818  Q
    |||||||||||||| ||||||| |||||||||||||| || |||   |||||||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 2081012 - 2081069
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| |||||||||||||||||||||||||| |  |||||  |||||| |||||||||    
T  2081012 gacttatttgaacttatctattgacataagctcaagtgagtgtatttgggagagctta 2081069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 739 - 804
Target Start/End: Original strand, 8007761 - 8007826
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||| || | ||| ||||||||||| |||| ||||||| ||||||| |||||| ||||||    
T  8007761 ttatagcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataa 8007826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 782
Target Start/End: Original strand, 33965520 - 33965600
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagctt--acattaaaacggtttgactttattttaccttttgt 782  Q
    |||||||||||| | |||| ||||||||  |||  |||||||||  | || ||||| ||||||||||||||||||||||||    
T  33965520 tccataagctcttcaagatagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttattttaccttttgt 33965600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 797
Target Start/End: Original strand, 36646473 - 36646506
Alignment:
Q  764 actttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||||| ||||||||||||||||||||||    
T  36646473 actttattttatcttttgtcatagaaatagctta 36646506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 668
Target Start/End: Complemental strand, 39971433 - 39971396
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagact 668  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  39971433 atttgaacttagctattgacataaacacttgtgagact 39971396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 739 - 792
Target Start/End: Complemental strand, 42038993 - 42038940
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaata 792  Q
    |||||||||| || |||||||||||||||||||  | ||||||| |||||||||    
T  42038993 ttatagcttatatgaaaacggtttgactttattagatcttttgttatagaaata 42038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 3e-20; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 707 - 861
Target Start/End: Original strand, 39257421 - 39257575
Alignment:
Q  707 ataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaa 806  Q
    |||||||||||  ||||||||||||  |||  |||||| ||| || |||| ||||||||||||||||||||||||| ||||| ||||| || ||||||      
T  39257421 ataagctctccatgattgcttatgaaaacaacttatagtttatatgaaaa-ggtttgactttattttaccttttgttatagagatagcatatacataagc 39257519  T
Q  807 ccttatatgataaaagttaatgctataagcgttttattaagctgttt-tccaaaca 861  Q
     |||| ||||||| |||| |||||||||||| || |||||| ||||| ||||||||    
T  39257520 acttacatgataatagtttatgctataagcgcttaattaagttgtttatccaaaca 39257575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 631 - 689
Target Start/End: Original strand, 12407664 - 12407722
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  12407664 atttgaacttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaa 12407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 5268603 - 5268688
Alignment:
Q  74 cacataaatgagtaatatacaggaggataaaatgaagttgcaatcaatgcagcaattccagcatagtcaattcttagcataatgta 159  Q
    |||||||||||||||||||| ||||||||||| || || |  ||||| || |||||||||||||||||||  || |||||||||||    
T  5268603 cacataaatgagtaatatactggaggataaaaagaggtagatatcaaagccgcaattccagcatagtcaagcctgagcataatgta 5268688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 762 - 837
Target Start/End: Original strand, 29115302 - 29115377
Alignment:
Q  762 tgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcg 837  Q
    |||||||||||||||||||||  ||||||||||||| ||||||   ||| ||||||||| ||| ||||||||||||    
T  29115302 tgactttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataagcg 29115377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 709 - 795
Target Start/End: Complemental strand, 14295540 - 14295454
Alignment:
Q  709 aagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagct 795  Q
    |||||||||  ||| ||||| ||  |||| |||||||||| || ||||| |||||||||||||||| ||||||| ||||||||||||    
T  14295540 aagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagct 14295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 694
Target Start/End: Complemental strand, 8090077 - 8090009
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    |||| ||||||||||||||| | ||| ||||||| | ||||||||||||||||||||| ||||| ||||    
T  8090077 gacttatttgaacttatctactaacacaagcactcgcgagactatttgagagagcttatgaaaacaact 8090009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 739 - 815
Target Start/End: Original strand, 35135728 - 35135804
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatg 815  Q
    |||||||||| || ||||  |||||||||||||||| ||||||| ||||||||| |||| |||||||  ||||||||    
T  35135728 ttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 753 - 804
Target Start/End: Original strand, 7096207 - 7096258
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  7096207 aaaatggtttgactttattttatcttttgttatagaaatagcttatacataa 7096258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 753 - 819
Target Start/End: Original strand, 20982215 - 20982281
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||| |||||||||||||| | ||||| |||||||||||||| ||||||   ||||||||||||    
T  20982215 aaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataa 20982281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 631 - 689
Target Start/End: Complemental strand, 36639658 - 36639600
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||||| ||||| |||||||||||| | ||||| ||||||||| ||||||||||    
T  36639658 atttgaacttacctatttacataagcacttataagactgtttgagagaacttacgaaaa 36639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 805
Target Start/End: Complemental strand, 10296408 - 10296371
Alignment:
Q  768 tattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10296408 tattttaccttttgttatagaaatagcttacacataaa 10296371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 739 - 804
Target Start/End: Original strand, 12407727 - 12407792
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    ||||| ||||||| ||||| | || ||||||||||| ||||||| |||||||||||||| ||||||    
T  12407727 ttataacttacatgaaaacagatttactttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 689
Target Start/End: Original strand, 14714774 - 14714835
Alignment:
Q  628 ctcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||| |||||| | |||||||||||||||||| |||||||| ||||| ||| |||||    
T  14714774 ctcatttgagcttatccactgacataagcacttgtgaaactatttgggagagattatgaaaa 14714835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 805
Target Start/End: Original strand, 21782656 - 21782701
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  21782656 tttgactttattttagcttttgttatagaaatagcttaaacataaa 21782701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 683
Target Start/End: Complemental strand, 10303932 - 10303880
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||| ||||||||  |||||||||| |||||||| ||||||||||||||||    
T  10303932 atttgagcttatctacggacataagcatttgtgagattatttgagagagctta 10303880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 869
Target Start/End: Complemental strand, 26516275 - 26516171
Alignment:
Q  766 tttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt-tccaaacaggc 864  Q
    ||||||||| |||||||  ||||||||||||| ||||||   ||||||||||||  | | |||||||||||| || |||||| ||||| ||||||| ||     
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatccaaactggg 26516176  T
Q  865 ccaaa 869  Q
    |||||    
T  26516175 ccaaa 26516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 739 - 819
Target Start/End: Complemental strand, 36539750 - 36539670
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    |||||||||| || ||||| | |||||||||||||| ||||||  | | |||||||||||||||||   ||||||||||||    
T  36539750 ttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttatatgataa 36539670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 694
Target Start/End: Original strand, 37611149 - 37611212
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    ||||||||||||||| || || ||| |||||||||| | |||||||||||||| ||||| ||||    
T  37611149 atttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaact 37611212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 694
Target Start/End: Original strand, 37787879 - 37787942
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    ||||||||||||||| || || ||| |||||||||| | |||||||||||||| ||||| ||||    
T  37787879 atttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaact 37787942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 704 - 774
Target Start/End: Complemental strand, 12975386 - 12975316
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttatttta 774  Q
    |||||||||||||| |||| ||||||||  |||| |||||||||| || |||||  ||||| |||||||||    
T  12975386 tccataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttatttta 12975316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 629 - 683
Target Start/End: Complemental strand, 29336768 - 29336714
Alignment:
Q  629 tcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    ||||||||  |||||||||| || ||||||||||||||||  |||||||||||||    
T  29336768 tcatttgagtttatctattggcaaaagcacttgtgagactgattgagagagctta 29336714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 764 - 797
Target Start/End: Complemental strand, 465933 - 465900
Alignment:
Q  764 actttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||||| ||||||||||||||||||||||    
T  465933 actttattttatcttttgtcatagaaatagctta 465900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 743 - 819
Target Start/End: Complemental strand, 3237100 - 3237023
Alignment:
Q  743 agcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaac-cttatatgataa 819  Q
    |||||| || |||| ||||||| | ||||||  ||||||| |||||||||||||| | ||||||| ||||||||||||    
T  3237100 agcttatatgaaaatggtttgattctattttgtcttttgtaatagaaatagcttatagataaaacacttatatgataa 3237023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 639 - 672
Target Start/End: Complemental strand, 3504868 - 3504835
Alignment:
Q  639 ttatctattgacataagcacttgtgagactattt 672  Q
    ||||| ||||||||||||||||||||||||||||    
T  3504868 ttatcaattgacataagcacttgtgagactattt 3504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 4855836 - 4855779
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| |||||| ||||| || |||| ||| ||||||||||||| ||||||||||||||    
T  4855836 gacttatttgagcttatataatgacttaaacacttgtgagactgtttgagagagctta 4855779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 668
Target Start/End: Original strand, 5377131 - 5377168
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagact 668  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  5377131 atttgagcttatctattgacataagcacttgtaagact 5377168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 743 - 816
Target Start/End: Original strand, 9860868 - 9860941
Alignment:
Q  743 agcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatga 816  Q
    |||||| || |||||||||||| ||||||||  | |||||  ||||||||||||| |||||| | |||||||||    
T  9860868 agcttatatgaaaacggtttgattttattttgtcatttgttctagaaatagcttatacataataacttatatga 9860941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 21782585 - 21782642
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| ||||||| ||||||| || ||||| |||||||||| || ||||||||||||||    
T  21782585 gacttatttgaaattatctactggcataaacacttgtgaggctgtttgagagagctta 21782642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Original strand, 37063160 - 37063205
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||||| ||||||| |||||||||| ||| ||||||    
T  37063160 gtttgactttattttatcttttgttatagaaatagtttatacataa 37063205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 837
Target Start/End: Complemental strand, 39128622 - 39128545
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcg 837  Q
    ||||||||||||||| ||||||| |||||| ||||||| ||||||   | ||||| | ||||| | ||||||||||||    
T  39128622 tttgactttattttatcttttgttatagaattagcttatacataagcacatatattaaaaaagcttatgctataagcg 39128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 3e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 759 - 853
Target Start/End: Complemental strand, 34563234 - 34563140
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt 853  Q
    |||||||||||||||| | ||||||||||||||| |||| | ||||   ||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  34563234 gtttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcgtttaattaagttgttt 34563140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 4764035 - 4763879
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataagctctccgagattgc 725  Q
    |||| ||||||||||||| | |  ||||||||| | ||||||||||| |||||||||  ||||| | ||||  | ||||||||||||||| |  ||| ||    
T  4764035 gacttatttgaacttatccactagcataagcacctatgagactatttaagagagcttttgaaaacatctaatgacatgtccataagctcttcaggatagc 4763936  T
Q  726 ttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgt 782  Q
    |||  |  |||| ||||||||||  | |||||||||||| ||||||||| |||||||    
T  4763935 ttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatcttttgt 4763879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 804
Target Start/End: Complemental strand, 7646225 - 7646145
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||| |||||||||||| ||| |  |||||  ||| ||||||||||||||||| | |||||||||||||| ||||||    
T  7646225 gcttatgaagacagtttatagattatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 682
Target Start/End: Original strand, 14926911 - 14926967
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctt 682  Q
    |||| |||||||||||| || || ||||||||||||||||||| |||||||||||||    
T  14926911 gacttatttgaacttatttactggcataagcacttgtgagactgtttgagagagctt 14926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 764 - 861
Target Start/End: Complemental strand, 4558777 - 4558679
Alignment:
Q  764 actttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt-tccaaaca 861  Q
    ||||||||||| ||||| | |||||||||||||| |||||||  |||| || ||||| ||| ||||||||||||  | |||||| ||||| ||||||||    
T  4558777 actttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaagttgtttatccaaaca 4558679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 739 - 853
Target Start/End: Complemental strand, 12972860 - 12972746
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgt 838  Q
    ||||||||||||| ||| | |||| | ||||||| | ||| ||| || ||||||||||| ||||||   ||||||||||||| | | ||||||||||||     
T  12972860 ttatagcttacatgaaaccagtttaattttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataagcgc 12972761  T
Q  839 tttattaagctgttt 853  Q
    || |||||| |||||    
T  12972760 ttaattaagttgttt 12972746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 672
Target Start/End: Complemental strand, 26499852 - 26499811
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactattt 672  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  26499852 atttgaatttatctactgacataagcacttgtgagactattt 26499811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 739 - 804
Target Start/End: Complemental strand, 42597405 - 42597340
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    ||||||||| ||| |||||  ||| ||||||||||| ||||||| |||||||||||||| ||||||    
T  42597405 ttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataa 42597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 683
Target Start/End: Complemental strand, 24326167 - 24326115
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||| |||||||| || ||||||||||||||||||| |||| |||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagctta 24326115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 737 - 797
Target Start/End: Original strand, 34788491 - 34788551
Alignment:
Q  737 gtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||||| ||  |||| |||||||||||||||| |||| |||||| ||||||||||    
T  34788491 gtttatagcttatatggaaacagtttgactttattttatctttggtcataaaaatagctta 34788551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 665
Target Start/End: Complemental strand, 4560643 - 4560604
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgag 665  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  4560643 gacttatttgagcttatctattgacataagcacttgtgag 4560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 682
Target Start/End: Complemental strand, 9700137 - 9700086
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctt 682  Q
    |||||| |||||||| |  ||||| |||||||||||||||||||||||||||    
T  9700137 atttgagcttatctactagcataaacacttgtgagactatttgagagagctt 9700086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 742 - 792
Target Start/End: Original strand, 11119067 - 11119118
Alignment:
Q  742 tagcttacattaaa-acggtttgactttattttaccttttgtcatagaaata 792  Q
    |||||||||||||| || |||||||||||||||| ||||||| |||||||||    
T  11119067 tagcttacattaaacacagtttgactttattttatcttttgttatagaaata 11119118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 678
Target Start/End: Complemental strand, 12833488 - 12833449
Alignment:
Q  639 ttatctattgacataagcacttgtgagactatttgagaga 678  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  12833488 ttatctattggcataagcacttgtgagactgtttgagaga 12833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 819
Target Start/End: Complemental strand, 14482185 - 14482126
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||||||||||| ||||||| |||||||||| ||| ||||||   ||||||||||||    
T  14482185 tttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataa 14482126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 673
Target Start/End: Original strand, 37353093 - 37353148
Alignment:
Q  618 tttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttg 673  Q
    |||||| ||||| || ||||| |||||| |||||||||||||||||||||| ||||    
T  37353093 tttggatcgacttatctgaacctatctactgacataagcacttgtgagactgtttg 37353148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 626 - 668
Target Start/End: Complemental strand, 27465492 - 27465450
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagact 668  Q
    |||| |||||||||||||||||| |||||||||||| ||||||    
T  27465492 gacttatttgaacttatctattggcataagcacttgcgagact 27465450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 640 - 682
Target Start/End: Original strand, 28769282 - 28769324
Alignment:
Q  640 tatctattgacataagcacttgtgagactatttgagagagctt 682  Q
    |||||| || ||||||||||||||||| |||||||||||||||    
T  28769282 tatctactggcataagcacttgtgagattatttgagagagctt 28769324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 651 - 689
Target Start/End: Complemental strand, 33940134 - 33940096
Alignment:
Q  651 ataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  33940134 ataagcacttgtgagacaatttgagagagcttatgaaaa 33940096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 797
Target Start/End: Original strand, 34522142 - 34522180
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  34522142 gtttgactttattttatcttgtgtcatagaaatagctta 34522180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 753 - 819
Target Start/End: Original strand, 35534941 - 35535007
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||| | ||||   ||||||||||||    
T  35534941 aaaacagtttgactttattttaacttttattatagaaatagcttatatataagcacttatatgataa 35535007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 837
Target Start/End: Complemental strand, 35869841 - 35869743
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcg 837  Q
    |||||||||| || ||||  |||||| |||||||||  ||||||  ||||||| ||||| |||||| | ||||||||||||  | | ||||||||||||    
T  35869841 ttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcg 35869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 753 - 819
Target Start/End: Original strand, 40728498 - 40728564
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||| |||||||||||||||| ||||||| ||||||||| ||||  ||| ||  ||||||||||||    
T  40728498 aaaacagtttgactttattttatcttttgttatagaaataacttatgcatgaacacttatatgataa 40728564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 641 - 694
Target Start/End: Original strand, 2487952 - 2488005
Alignment:
Q  641 atctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    ||||| |||||||||||||||||||||| |||| |||| |||| ||||| ||||    
T  2487952 atctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaact 2488005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 740 - 797
Target Start/End: Complemental strand, 2698796 - 2698739
Alignment:
Q  740 tatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||| || ||||| ||| ||||||||||||| |||||  ||||||||||||||    
T  2698796 tatagcttatatgaaaacagttcgactttattttactttttgctatagaaatagctta 2698739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 10438024 - 10437967
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| ||||||||||||| | || ||||| |||||||||||| |||| ||||||||||    
T  10438024 gacttatttgaacttatccaatggcataatcacttgtgagacaattttagagagctta 10437967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Original strand, 12224985 - 12225030
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||    
T  12224985 gtttgactttattttatcttttgtcttagaaataacttatacataa 12225030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 679
Target Start/End: Complemental strand, 12361335 - 12361282
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagag 679  Q
    |||| ||||||||||||||| ||| ||||| |||||| ||||| ||||||||||    
T  12361335 gacttatttgaacttatctactgatataagtacttgttagactctttgagagag 12361282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Complemental strand, 26215480 - 26215435
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||| ||||||||||| ||||||| |||||||||||||| ||||||    
T  26215480 gtttaactttattttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 638 - 683
Target Start/End: Complemental strand, 26479914 - 26479869
Alignment:
Q  638 cttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||||    
T  26479914 cttatctattgacacaaggacttgtgaaactatttgcgagagctta 26479869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 3e-17; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 631 - 713
Target Start/End: Complemental strand, 2996709 - 2996627
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataagct 713  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||| |||| |  | |||||||||||||    
T  2996709 atttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagct 2996627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 46860059 - 46860002
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  46860059 gacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagctta 46860002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 631 - 683
Target Start/End: Complemental strand, 29376039 - 29375987
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  29376039 atttgaacttatctattgacataagcacttgtgacgctatttcagagagctta 29375987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 33534098 - 33534161
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||| |||||| |||||||| ||||||||| |||||||||| |||||||||||||||| |||||    
T  33534098 gacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaa 33534161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 36734877 - 36734784
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgtt 852  Q
    |||||||||||||||||||||||| ||||||| || ||| ||||||   ||||||||||||| ||  ||| ||||||| ||| |||||| ||||    
T  36734877 gtttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataaaggtatatgttataagcttttaattaagttgtt 36734784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 704 - 792
Target Start/End: Original strand, 18628574 - 18628662
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaata 792  Q
    |||||||||||||| ||||  |||||||  |||||||||| |||| || ||||| |||||||| |||||| |||||||| | |||||||    
T  18628574 tccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttttccttttgttaaagaaata 18628662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 739 - 819
Target Start/End: Original strand, 54325103 - 54325183
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    |||||||||| || ||||| |||||||||||||||| ||||||| |||||||||| ||| ||| ||   ||||||||||||    
T  54325103 ttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataa 54325183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 631 - 694
Target Start/End: Original strand, 18628487 - 18628550
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    |||||| |||||||| |||||||| ||||||||||||| |||| ||||||||| ||||| ||||    
T  18628487 atttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaact 18628550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 734 - 804
Target Start/End: Original strand, 30338653 - 30338723
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    ||||||||||||||| || ||||| |||| |||||||| || ||||||| |||||||||| ||| ||||||    
T  30338653 acagtttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataa 30338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 759 - 805
Target Start/End: Original strand, 51044545 - 51044591
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||    
T  51044545 gtttgactttattttatcttttgttatagaaatagcttatacataaa 51044591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 667
Target Start/End: Complemental strand, 32072012 - 32071963
Alignment:
Q  618 tttggaccgactcatttgaacttatctattgacataagcacttgtgagac 667  Q
    ||||||| |||| ||||||  |||||||||||||||||||||||||||||    
T  32072012 tttggactgacttatttgagtttatctattgacataagcacttgtgagac 32071963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 678
Target Start/End: Complemental strand, 47146094 - 47146033
Alignment:
Q  617 atttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttgagaga 678  Q
    |||||||  |||| |||||||||||| ||||| |||||||||||||||||||| ||| ||||    
T  47146094 atttggattgacttatttgaacttatatattggcataagcacttgtgagactacttgggaga 47146033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 753 - 820
Target Start/End: Complemental strand, 4191730 - 4191662
Alignment:
Q  753 aaaacggtttgactttatttt-accttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    ||||| ||||||||||||||| | ||||||| |||||||||||||| ||||||   |||||||||||||    
T  4191730 aaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataaa 4191662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 741 - 793
Target Start/End: Original strand, 20936070 - 20936122
Alignment:
Q  741 atagcttacattaaaacggtttgactttattttaccttttgtcatagaaatag 793  Q
    ||||||||||| ||||  |||||||||||||||| ||||||| ||||||||||    
T  20936070 atagcttacatgaaaatagtttgactttattttatcttttgttatagaaatag 20936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 635 - 679
Target Start/End: Original strand, 22239490 - 22239534
Alignment:
Q  635 gaacttatctattgacataagcacttgtgagactatttgagagag 679  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  22239490 gaacttatctactgacacaagcacttgtgagactatttgaaagag 22239534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 850
Target Start/End: Original strand, 35727126 - 35727210
Alignment:
Q  766 tttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctg 850  Q
    ||||||| | ||||||| ||||||||||||||| |||||  |||| ||||||||  ||  |||||||||||| || |||||||||    
T  35727126 tttatttgaacttttgttatagaaatagcttacgcataagcccttttatgataagtgtgtatgctataagcggttaattaagctg 35727210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 819
Target Start/End: Original strand, 3249801 - 3249860
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||||||||| | ||||| ||||||||||| |||||||||| |  ||||||||||||    
T  3249801 tttgactttatttcatcttttatcatagaaataacttacacatacacacttatatgataa 3249860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 682
Target Start/End: Original strand, 18512449 - 18512500
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctt 682  Q
    |||||| |||||||| |||||||| |||||||||||||| |||| |||||||    
T  18512449 atttgagcttatctactgacataaacacttgtgagactagttgaaagagctt 18512500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 802
Target Start/End: Complemental strand, 21953277 - 21953214
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacat 802  Q
    |||||||||| || ||||  ||||||||||||||| |||||||| |||||||||| ||| ||||    
T  21953277 ttatagcttatataaaaagagtttgactttattttcccttttgttatagaaatagtttatacat 21953214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 853
Target Start/End: Original strand, 51555956 - 51556047
Alignment:
Q  762 tgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt 853  Q
    ||||||||||||| ||||||| |||  ||||||||| ||||||   ||||||||||||| | | ||| |||||| | ||||||||| |||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataaatggttatgttataagtgctttattaagttgttt 51556047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 689
Target Start/End: Original strand, 3549497 - 3549547
Alignment:
Q  639 ttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||||||| ||||||||||| ||||||| ||||||||| |||| |||||    
T  3549497 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 3549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 651 - 689
Target Start/End: Complemental strand, 4071994 - 4071956
Alignment:
Q  651 ataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  4071994 ataagcacttgtgagactgtttgagagagcttatgaaaa 4071956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 802
Target Start/End: Complemental strand, 17884047 - 17884009
Alignment:
Q  764 actttattttaccttttgtcatagaaatagcttacacat 802  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  17884047 actttattttatcttttgttatagaaatagcttacacat 17884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 797
Target Start/End: Complemental strand, 21952559 - 21952521
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  21952559 gtttgacttgattttaccttttgttatagaaatagctta 21952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 797
Target Start/End: Complemental strand, 21952965 - 21952907
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||| || |||||  |||||||||||||||| | |||| ||||||||||||||    
T  21952965 ttatagcttatatgaaaacaatttgactttattttacttgttgttatagaaatagctta 21952907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 743 - 797
Target Start/End: Original strand, 22684586 - 22684640
Alignment:
Q  743 agcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||| || |||||  ||||||||||||||||| ||||| ||||||||||||||    
T  22684586 agcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagctta 22684640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 837
Target Start/End: Complemental strand, 24444042 - 24443944
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcg 837  Q
    |||||||||| || ||||  |||||| |||||||||  ||||||  ||||||| ||||| |||||| | ||||||||||||  | | ||||||||||||    
T  24444042 ttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcg 24443944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 797
Target Start/End: Complemental strand, 27623639 - 27623581
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||| |||||||  |||||||||||||||| ||||||| ||| ||||| ||||    
T  27623639 ttatagcttatattaaaatagtttgactttattttatcttttgttatacaaatatctta 27623581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 632 - 682
Target Start/End: Complemental strand, 28232680 - 28232630
Alignment:
Q  632 tttgaacttatctattgacataagcacttgtgagactatttgagagagctt 682  Q
    ||||||||||||||||||||| |||||||| |||||| ||||  |||||||    
T  28232680 tttgaacttatctattgacatgagcacttgcgagactgtttggaagagctt 28232630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 760 - 802
Target Start/End: Original strand, 39438623 - 39438665
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacat 802  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||    
T  39438623 tttgactttattttatcttatgttatagaaatagcttacacat 39438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 735 - 797
Target Start/End: Original strand, 43372031 - 43372093
Alignment:
Q  735 cagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||||||| || ||||| |||||||| ||||||| ||||||| ||| ||||| ||||    
T  43372031 cagtttatagcttatataaaaacagtttgactgtattttatcttttgttataaaaatacctta 43372093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 805
Target Start/End: Original strand, 46013366 - 46013432
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||| |||| || ||||| |||||||||||||||| |||||||   |||||||| |||||||||||    
T  46013366 ttataacttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaa 46013432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 747 - 805
Target Start/End: Original strand, 52645823 - 52645881
Alignment:
Q  747 tacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||| ||||| |||||| || |||||| ||||||| |||||||||||||| |||||||    
T  52645823 tacataaaaacagtttgaattgattttatcttttgttatagaaatagcttatacataaa 52645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 626 - 684
Target Start/End: Original strand, 54277252 - 54277310
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttac 684  Q
    |||| ||||||||||||||| |||||||| ||||| ||||||| || | ||||||||||    
T  54277252 gacttatttgaacttatctagtgacataaacacttatgagactgttagcgagagcttac 54277310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 711
Target Start/End: Complemental strand, 6428159 - 6428074
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataag 711  Q
    |||| |||||| ||||| |||||  |||||||||||||||||  |||||||||| ||| ||||| |||| |  | |||||||||||    
T  6428159 gacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataag 6428074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 731
Target Start/End: Complemental strand, 7730748 - 7730636
Alignment:
Q  618 tttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataagctctcc 717  Q
    |||||| ||||| |||||| || ||||| |||||||| |||  ||||||||||||  ||||||||| | ||| |||| |  | |||||||||||||||||    
T  7730748 tttggatcgacttatttgagct-atctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatgtccataagctctcc 7730650  T
Q  718 gagattgcttatga 731  Q
      ||| ||||||||    
T  7730649 aggatagcttatga 7730636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 22471401 - 22471352
Alignment:
Q  640 tatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||| |||||||||||||||||||||| |||| |||| |||| |||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaa 22471352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 739 - 820
Target Start/End: Complemental strand, 30024704 - 30024623
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    |||||||||| || |||||  ||| ||||||||||| ||||||| ||||||||| ||||  |||||   |||||||||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaa 30024623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Complemental strand, 32724103 - 32724058
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||||| ||||||| |||||||||| ||| ||||||    
T  32724103 gtttgactttattttatcttttgtaatagaaatagattagacataa 32724058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 805
Target Start/End: Complemental strand, 35958638 - 35958593
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||||||||||||| ||| ||| |||||||||||||| |||||||    
T  35958638 tttgactttattttaacttatgttatagaaatagcttatacataaa 35958593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 39931303 - 39931360
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| ||||||| |||| ||||||||||| ||||||||||||| | || |||||||||    
T  39931303 gacttatttgaatttatttattgacataaacacttgtgagactgtctgtgagagctta 39931360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 753 - 814
Target Start/End: Original strand, 46019706 - 46019767
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatat 814  Q
    ||||| ||||| |||||||||  |||||||  |||||||||||||||||||||  |||||||    
T  46019706 aaaacagtttggctttattttttcttttgttctagaaatagcttacacataaacacttatat 46019767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Complemental strand, 47970302 - 47970257
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    ||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  47970302 gtttgacttcattttatcttttgttatagaaatagcttatacataa 47970257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 819
Target Start/End: Complemental strand, 52735105 - 52735049
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||||||||||| ||||||| | ||||||||||||| |||||   ||||||||||||    
T  52735105 tttgactttattttatcttttgttacagaaatagcttacgcataa---cttatatgataa 52735049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 817
Target Start/End: Complemental strand, 54986404 - 54986348
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgat 817  Q
    ||||||||||| |||  |||||| |||||||||||||| |||||||| ||||||||||    
T  54986404 tttgactttatcttat-ttttgttatagaaatagcttatacataaaaacttatatgat 54986348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 681
Target Start/End: Complemental strand, 56007814 - 56007765
Alignment:
Q  632 tttgaacttatctattgacataagcacttgtgagactatttgagagagct 681  Q
    |||||||||||||| || ||||| ||||||| ||||| ||||||||||||    
T  56007814 tttgaacttatctactggcataatcacttgtaagactgtttgagagagct 56007765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 4e-16; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 704 - 804
Target Start/End: Complemental strand, 28165130 - 28165030
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    ||||||||||||||  ||| |||||| | |||||||||||||||| ||||||||  |||||||| |||||| ||||||| ||||||| | |||| |||||    
T  28165130 tccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacata 28165031  T
Q  804 a 804  Q
    |    
T  28165030 a 28165030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 759 - 861
Target Start/End: Complemental strand, 47004071 - 47003969
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttttccaa 858  Q
    |||||||||||||||| || |||| |||||||||||||||| |||||  |||||||||||||  ||  ||||||||||  || |||||| |||| |||||    
T  47004071 gtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataaacatttttgctataagcacttaattaagttgttatccaa 47003972  T
Q  859 aca 861  Q
    |||    
T  47003971 aca 47003969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 44151405 - 44151468
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||| |||||||||||| || ||||||||| |||||||||| |||||||||||||||| |||||    
T  44151405 gacttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatgaaaa 44151468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 704 - 862
Target Start/End: Complemental strand, 22759225 - 22759064
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    ||||||||||||||  ||| ||||||||   ||| || ||||||| || |||||  |||  |||||||||| ||||||| ||| |||||||||| |||||    
T  22759225 tccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacata 22759126  T
Q  804 aaaccttatatgataaaa--gttaatgctataagcgttttattaagctgttt-tccaaacag 862  Q
    ||  ||||||||||||||  ||| || ||||||| | || |||||| ||||| |||||||||    
T  22759125 aacgcttatatgataaaaatgtttatactataagtgcttaattaagttgtttatccaaacag 22759064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 650 - 863
Target Start/End: Original strand, 28340374 - 28340587
Alignment:
Q  650 cataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataagctctccgagattgcttatgaggacagtttatagcttac 749  Q
    ||||||| ||||||||||| || | ||||||||| ||||| |||| |  | |||||||||||||||||   || |||| |||  |||  ||||| |||||    
T  28340374 cataagctcttgtgagactgttgg-gagagcttatgaaaacaacttatgacatgtccataagctctccagcatagcttctgaaaacaacttataacttac 28340472  T
Q  750 attaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagct 849  Q
    || ||||| ||||||||||||||||   |||||   |||||||||||| |||| ||  ||| || ||||||   |||||||||||||  || ||||||||    
T  28340473 atgaaaacagtttgactttattttattgtttgttgaagaaatagcttatacattaatacttgtacgataaacactaatgctataagcacttaattaagct 28340572  T
Q  850 gt-tttccaaacagg 863  Q
    || | ||||||||||    
T  28340573 gtatatccaaacagg 28340587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 682
Target Start/End: Original strand, 37064143 - 37064199
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctt 682  Q
    |||| ||||||||||||||| |||||||||||||||||||||  |||| ||||||||    
T  37064143 gacttatttgaacttatctagtgacataagcacttgtgagacggtttgtgagagctt 37064199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 739 - 819
Target Start/End: Complemental strand, 49060544 - 49060464
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    |||||||||| || ||||   |||||||||||||||  |||||| |||||||||||||| |||||||  ||||||||||||    
T  49060544 ttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataa 49060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 724 - 803
Target Start/End: Original strand, 5006560 - 5006639
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    ||||||||  ||| |||||| |||| || ||||| |||||||||||||||| ||||||| |||| ||||||||| |||||    
T  5006560 gcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 626 - 713
Target Start/End: Original strand, 13960653 - 13960739
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataagct 713  Q
    |||| |||||| |||||| |||| |||||||||||| ||||||||||||||||||||| ||||| | || | || | |||||||||||    
T  13960653 gacttatttgagcttatccattg-cataagcacttgcgagactatttgagagagcttatgaaaacagcttataacaagtccataagct 13960739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 734 - 805
Target Start/End: Complemental strand, 23918966 - 23918895
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||| |||||||||| || |||||  ||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  23918966 acagattatagcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataaa 23918895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 631 - 713
Target Start/End: Complemental strand, 24909924 - 24909842
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaactaacaagatgtccataagct 713  Q
    |||||||||||| ||||||||||||||||| |||||| | |||||||| |||| ||||  ||||||  | |||| ||||||||    
T  24909924 atttgaacttatatattgacataagcacttatgagaccacttgagagaacttatgaaatcaactaatgacatgttcataagct 24909842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 631 - 689
Target Start/End: Complemental strand, 33894763 - 33894705
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||| |||||| | |||||||||||||||||||||| |||| ||||||||| |||||    
T  33894763 atttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaa 33894705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 694
Target Start/End: Original strand, 25670522 - 25670583
Alignment:
Q  633 ttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||| | |||| ||||| ||||    
T  25670522 ttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaact 25670583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 739 - 836
Target Start/End: Original strand, 27481360 - 27481457
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagc 836  Q
    |||||||||| ||  |||| |||||||||  ||||| | ||||| |||||||||||||| |||||||  ||||||| |||||  || |||||||||||    
T  27481360 ttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatacataaacacttatataataaacatttatgctataagc 27481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 689
Target Start/End: Original strand, 34754745 - 34754802
Alignment:
Q  632 tttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||| |||||||||||||| || ||||| ||||||| |||||||||||||| |||||    
T  34754745 tttgagcttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaa 34754802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 753 - 793
Target Start/End: Complemental strand, 2999181 - 2999141
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatag 793  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  2999181 aaaacggtttgactttattttatcttttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 3802219 - 3802263
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||    
T  3802219 aaaacgatttgactttattttaccttttattatagaaatagctta 3802263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 683
Target Start/End: Complemental strand, 30751655 - 30751603
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| |||||||||| ||||||||||||||||| |||| |||| |||||||||    
T  30751655 atttaaacttatctactgacataagcacttgtgcgactgtttgggagagctta 30751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 739 - 819
Target Start/End: Complemental strand, 35536111 - 35536031
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||| |||| || |||||  ||||||||||||||| ||| ||| |||||||||||||| ||||||  | |||||||||||    
T  35536111 ttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataa 35536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 683
Target Start/End: Original strand, 36598290 - 36598342
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    ||||||||||| ||| ||||||||||| |||||||| | ||||||||||||||    
T  36598290 atttgaacttaactactgacataagcaattgtgagattgtttgagagagctta 36598342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 739 - 819
Target Start/End: Original strand, 39551614 - 39551694
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    |||||||||| || ||||| |||| |||||| | || ||||||| |||||||||||||| || ||||  ||||||||||||    
T  39551614 ttatagcttatatgaaaacagttttactttagtatatcttttgttatagaaatagcttatacttaaatacttatatgataa 39551694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 683
Target Start/End: Complemental strand, 40428691 - 40428639
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||||||||| ||||||||| ||||||||||||||| || || ||||||    
T  40428691 atttgaacttatctgttgacataaccacttgtgagactatctgggaaagctta 40428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 804
Target Start/End: Complemental strand, 5276214 - 5276163
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||    
T  5276214 aaaacggtttgactttatgttatcttttgttataaaaatagcttatacataa 5276163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 820
Target Start/End: Complemental strand, 7244692 - 7244625
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    ||||| |||||||||| ||||| ||||||  |||||||||||||| ||||||   |||||||||||||    
T  7244692 aaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataaa 7244625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 678
Target Start/End: Complemental strand, 8094442 - 8094395
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagaga 678  Q
    |||||| |||||||| |  |||||||||||||||||||||||||||||    
T  8094442 atttgagcttatctactagcataagcacttgtgagactatttgagaga 8094395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 796
Target Start/End: Original strand, 30160970 - 30161013
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagctt 796  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||    
T  30160970 aaaacagtttgactttattttatcttttgccatagaaatagctt 30161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 805
Target Start/End: Original strand, 27626210 - 27626256
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||||||||||| ||||||  |||||||||||||| |||||||    
T  27626210 gtttgactttattttagcttttgatatagaaatagcttatacataaa 27626256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 805
Target Start/End: Original strand, 35808990 - 35809036
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||| ||||||| ||||||| |||||||||||||| |||||||    
T  35808990 gtttgactatattttatcttttgttatagaaatagcttatacataaa 35809036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 689
Target Start/End: Original strand, 43854975 - 43855033
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||||||||| | ||||||||| ||| || |||||||| ||||||||| |||||    
T  43854975 atttgaacttatctactaacataagcatttgcgacactatttgggagagcttatgaaaa 43855033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 688
Target Start/End: Complemental strand, 24895592 - 24895535
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaa 688  Q
    |||| ||||||| ||||||||||||||||| |||||| | |||||||| |||| ||||    
T  24895592 attttaacttatatattgacataagcacttatgagaccacttgagagaacttatgaaa 24895535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 668
Target Start/End: Complemental strand, 29363644 - 29363607
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagact 668  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  29363644 atttgaacttatctactaacataagcacttgtgagact 29363607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Complemental strand, 31341178 - 31341133
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||||| ||||||| ||| |||||||||| ||||||    
T  31341178 gtttgactttattttatcttttgttatacaaatagcttatacataa 31341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 743 - 804
Target Start/End: Complemental strand, 33894622 - 33894562
Alignment:
Q  743 agcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||| || ||||| ||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  33894622 agcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataa 33894562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 797
Target Start/End: Complemental strand, 42656498 - 42656461
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  42656498 tttgactttattttatcttttgttatagaaatagctta 42656461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 47041968 - 47042025
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| |||||| | ||||||||||||| | ||||||||||||| |||| |||||||||    
T  47041968 gacttatttgagcatatctattgacattaacacttgtgagactttttgtgagagctta 47042025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 726 - 820
Target Start/End: Complemental strand, 29430772 - 29430679
Alignment:
Q  726 ttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    ||||||| |||| |||||||||| |  ||||| |||||||||||||| || |||||| |||||||||||||| ||||||| |||| |||||||||    
T  29430772 ttatgagaacagcttatagcttataagaaaacagtttgactttatttaac-ttttgttatagaaatagcttatacataaacccttgtatgataaa 29430679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 763 - 816
Target Start/End: Complemental strand, 13864630 - 13864577
Alignment:
Q  763 gactttattttaccttttgtcatagaaatagcttacacataaaaccttatatga 816  Q
    |||||||||||||||||||| |||||||||||||| |||||||  |||||||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 741 - 820
Target Start/End: Complemental strand, 14209279 - 14209200
Alignment:
Q  741 atagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    |||||||| || ||||| |||||| ||||||||| ||||||| || ||||||||||| ||| |||  |||||||||||||    
T  14209279 atagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataaa 14209200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 629 - 683
Target Start/End: Original strand, 13869040 - 13869094
Alignment:
Q  629 tcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||| || ||||||| |||||||||||||| ||||||||||||||||| ||||    
T  13869040 tcattttaatttatctactgacataagcacttatgagactatttgagagaactta 13869094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 725 - 862
Target Start/End: Original strand, 13869147 - 13869285
Alignment:
Q  725 cttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagtt 824  Q
    |||||||  |||| |||||||||| || ||||   ||||| | | ||||| || |||||||||||||||||||  ||||||  ||| ||||||||  |||    
T  13869147 cttatgaaaacagcttatagcttagatgaaaataatttgaatgtcttttatctcttgtcatagaaatagcttatgcataaatacttctatgataagtgtt 13869246  T
Q  825 aatgctataagcgttttattaagctgttt-tccaaacag 862  Q
     |||||||||||| || ||| |||||||| |||||||||    
T  13869247 tatgctataagcgcttaattgagctgtttatccaaacag 13869285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 762 - 820
Target Start/End: Original strand, 40672885 - 40672943
Alignment:
Q  762 tgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    ||||||||||||| ||||| ||||||||||| |||| |||||||| |||| ||||||||    
T  40672885 tgactttattttatcttttttcatagaaataacttatacataaaaacttaaatgataaa 40672943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 742 - 819
Target Start/End: Original strand, 17952770 - 17952847
Alignment:
Q  742 tagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||| || ||||  |||||||||||||||| ||||||| |||||||||||||| | ||||   ||||||||||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataa 17952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 853
Target Start/End: Complemental strand, 31461421 - 31461328
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt 853  Q
    ||||||||||||||| ||||||| |||||||||||||| | ||||   ||||||||||| | ||| |||||| ||| | || |||||| |||||    
T  31461421 tttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaagttgttt 31461328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 668
Target Start/End: Complemental strand, 40759296 - 40759259
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagact 668  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40759296 atttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 704 - 804
Target Start/End: Complemental strand, 5133811 - 5133711
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    |||||||||||||  ||||  ||| |||  |||| ||||| |||| || ||||| ||||  |||||||||| ||||||| |||||||||||||| |||||    
T  5133811 tccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatacata 5133712  T
Q  804 a 804  Q
    |    
T  5133711 a 5133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 736 - 804
Target Start/End: Original strand, 18962101 - 18962169
Alignment:
Q  736 agtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    ||||||||||||| || ||||| |||| ||||||||||| ||||||| ||| |||||||| | ||||||    
T  18962101 agtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataa 18962169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 632 - 684
Target Start/End: Complemental strand, 35486052 - 35486000
Alignment:
Q  632 tttgaacttatctattgacataagcacttgtgagactatttgagagagcttac 684  Q
    ||||||||||||||  |||||||| |||||||||||| ||||||||| |||||    
T  35486052 tttgaacttatctaccgacataagaacttgtgagactgtttgagagaacttac 35486000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 8017575 - 8017512
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||| ||||||  ||||||||||||||||||||||||| || |||||| |||| |||| |||||    
T  8017575 gacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaa 8017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 835
Target Start/End: Original strand, 17221627 - 17221702
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataag 835  Q
    ||||||||||||||||||||||||||  || ||| ||| |||||||  |||| |||||||| | | ||||||||||    
T  17221627 tttgactttattttaccttttgtcattaaactagtttatacataaacacttaaatgataaaggcttatgctataag 17221702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 35810008 - 35809945
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||| |||||| ||||||||  | |||||||| ||||||||||||||| ||||||| |||||||    
T  35810008 gacttatttgagcttatctaccggcataagcagttgtgagactatttgggagagctaacgaaaa 35809945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 689
Target Start/End: Complemental strand, 36677773 - 36677730
Alignment:
Q  646 ttgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||||||||||||||||||||  |||||||||| |||||    
T  36677773 ttgacataagcacttgtgagactattcaagagagcttatgaaaa 36677730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 689
Target Start/End: Complemental strand, 13867014 - 13866956
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||| |||||||| || ||||| ||||||||||||| ||||||||| |||| |||||    
T  13867014 atttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaa 13866956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 805
Target Start/End: Original strand, 30537593 - 30537659
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||||| || ||||| |||||||||||| | | |||| || |||||||||||||||| |||||    
T  30537593 ttatagcttatatgaaaactgtttgactttatatgatctttagttatagaaatagcttacatataaa 30537659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 862
Target Start/End: Original strand, 33197327 - 33197429
Alignment:
Q  761 ttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt-tccaaa 859  Q
    ||||||||||| || ||||||| |||||||||||||| | ||||   ||||||||||||  ||| ||| |||||| |||| ||| || ||||| ||||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaatttagttgtttatccaaa 33197426  T
Q  860 cag 862  Q
    |||    
T  33197427 cag 33197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 781
Target Start/End: Complemental strand, 33942154 - 33942112
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttg 781  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||    
T  33942154 ttatagcttacatgaaaacagtttgactttattttatcttttg 33942112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 706 - 780
Target Start/End: Original strand, 36863658 - 36863732
Alignment:
Q  706 cataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttacctttt 780  Q
    |||||||||||| |||| ||||||||  ||| |||||| |||| || ||||  |||||||||||||||| |||||    
T  36863658 cataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttattttatctttt 36863732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 745 - 794
Target Start/End: Complemental strand, 10769739 - 10769690
Alignment:
Q  745 cttacattaaaacggtttgactttattttaccttttgtcatagaaatagc 794  Q
    |||| |||| ||| |||||||||||| ||||||||||| |||||||||||    
T  10769739 cttatattagaacagtttgactttatgttaccttttgttatagaaatagc 10769690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 664 - 717
Target Start/End: Complemental strand, 12785966 - 12785913
Alignment:
Q  664 agactatttgagagagcttacgaaaagaactaacaagatgtccataagctctcc 717  Q
    |||||||||||||||||||||| ||| |||| || | ||||||||||| |||||    
T  12785966 agactatttgagagagcttacggaaacaacttacgacatgtccataagttctcc 12785913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 689
Target Start/End: Complemental strand, 13234641 - 13234584
Alignment:
Q  632 tttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||| |||||| |||| ||||||||||||| ||||| |||||||| |||||| ||||    
T  13234641 tttgagcttatcaattggcataagcacttgtaagactgtttgagagtgcttacaaaaa 13234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 22878239 - 22878182
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| |||||| |||||| | |||||||||||||||||||||| |||| |||| ||||    
T  22878239 gacttatttgagcttatccactgacataagcacttgtgagactgtttgggagacctta 22878182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 739 - 796
Target Start/End: Original strand, 31740025 - 31740082
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctt 796  Q
    |||||||||| || ||||  |||||||||||||||| |||| || |||||||||||||    
T  31740025 ttatagcttatatgaaaatagtttgactttattttatctttagttatagaaatagctt 31740082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 797
Target Start/End: Original strand, 32098395 - 32098432
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  32098395 tttgactttattttatcttttgttatagaaatagctta 32098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 820
Target Start/End: Original strand, 35329849 - 35329966
Alignment:
Q  704 tccataagctctccgagattgctt-atgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacat 802  Q
    |||||||||||||| |||| |||| |||  ||||| ||||||||||  | ||| | | |||||||||||||| ||| ||| || ||||||| |||  |||    
T  35329849 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 35329948  T
Q  803 aaaaccttatatgataaa 820  Q
    |||  |||||||||||||    
T  35329949 aaacacttatatgataaa 35329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 805
Target Start/End: Original strand, 38239638 - 38239683
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||| |||||| ||||||| |||||||||||||| |||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaa 38239683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 835
Target Start/End: Original strand, 1160 - 1236
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataag 835  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||   ||||||||||| | ||| ||||||||||    
T  1160 gtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataag 1236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 835
Target Start/End: Complemental strand, 2815 - 2739
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataag 835  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||   ||||||||||| | ||| ||||||||||    
T  2815 gtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataag 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 820
Target Start/End: Original strand, 44032062 - 44032146
Alignment:
Q  736 agtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaa 820  Q
    ||||||||||||| || |||||  ||||||||||||||| ||||||| |||||||  ||||| |||||||  |||||||||||||    
T  44032062 agtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataaa 44032146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 631 - 688
Target Start/End: Complemental strand, 4868535 - 4868478
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaa 688  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||| ||| ||||    
T  4868535 atttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatgaaa 4868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 724 - 805
Target Start/End: Original strand, 48830127 - 48830208
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||||||  ||||||||||||||| || ||||  |||||||||||||||| |||| || ||||||||| |||| |||||||    
T  48830127 gcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataaa 48830208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 694
Target Start/End: Original strand, 4033946 - 4034014
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    ||||||||||||||| |||| || ||||| ||||||||||| | |||||||||||||| ||||| ||||    
T  4033946 gactcatttgaacttgtctactggcataaacacttgtgagattgtttgagagagcttatgaaaataact 4034014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 683
Target Start/End: Complemental strand, 16980951 - 16980887
Alignment:
Q  619 ttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||| |||| |||||||||||| ||   ||||||| |||||||||||||||||||||||||||    
T  16980951 ttggactgacttatttgaacttatataccaacataagtacttgtgagactatttgagagagctta 16980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 701 - 804
Target Start/End: Original strand, 23544667 - 23544771
Alignment:
Q  701 atgtccataagctctccgagattgcttatgaggacagttta-tagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttaca 799  Q
    |||| |||||| | |||||||| ||||||||  |||||||| ||||||| || |||||  |||||||| |||||| |||||  ||||||||||||||| |    
T  23544667 atgttcataagttttccgagatagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttata 23544766  T
Q  800 cataa 804  Q
    |||||    
T  23544767 cataa 23544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 819
Target Start/End: Complemental strand, 23895320 - 23895260
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    |||||| ||||||||| ||||||| |||||||||||||| |||||| | ||||||||||||    
T  23895320 gtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataa 23895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 34536299 - 34536236
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||| |||||||| ||||||||||||||| ||||||||||||| |||||||  ||||| |||||    
T  34536299 gacttatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaa 34536236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 720 - 835
Target Start/End: Complemental strand, 36602813 - 36602698
Alignment:
Q  720 gattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 819  Q
    ||||||||||||| |||  ||||| |||| || |||| | ||||||||||||||| || ||||  |||| |||||||| ||||||   ||||||||||||    
T  36602813 gattgcttatgagaacaagttataacttagatgaaaatgatttgactttattttatctattgttgtagatatagcttatacataatcacttatatgataa 36602714  T
Q  820 aagttaatgctataag 835  Q
    || || ||| ||||||    
T  36602713 aaatttatgatataag 36602698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 631 - 689
Target Start/End: Original strand, 1393022 - 1393080
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||||||||||| ||||||||| |||||||||||   |||||||||||||| |||||    
T  1393022 atttgaacttatcttttgacataaacacttgtgagagggtttgagagagcttatgaaaa 1393080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 739 - 805
Target Start/End: Complemental strand, 15360898 - 15360832
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||||||||| || ||||| |||||||||||||||| ||||||| ||||||||| || | |||||||    
T  15360898 ttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaa 15360832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 626 - 688
Target Start/End: Complemental strand, 27807256 - 27807194
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaa 688  Q
    |||| |||||||||| |||| ||||||||||| |||| ||||| |||||||||||||| ||||    
T  27807256 gacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttatgaaa 27807194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 734 - 788
Target Start/End: Original strand, 34179933 - 34179987
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcataga 788  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||||||| |||||    
T  34179933 acagtttatagcttagattaaaacaatttgactttattttatcttttgttataga 34179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 675
Target Start/End: Original strand, 24460330 - 24460379
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgag 675  Q
    |||| ||||||||||||||| |||||| ||||||||||||||| ||||||    
T  24460330 gacttatttgaacttatctactgacatgagcacttgtgagactgtttgag 24460379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 797
Target Start/End: Complemental strand, 49517089 - 49517016
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||  |||| |||||||||| || |||||  ||||||||||||||| ||||||| ||||||||| ||||    
T  49517089 gcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataactta 49517016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 626 - 694
Target Start/End: Complemental strand, 4757479 - 4757411
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaagaact 694  Q
    |||| |||||| ||||||||||||||||| |||||||||||| |||||  ||| |||| ||||| ||||    
T  4757479 gacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaact 4757411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 803
Target Start/End: Original strand, 42351992 - 42352036
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||    
T  42351992 gtttgactttattttaacttttgttatagaaatagattacacata 42352036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 653 - 689
Target Start/End: Complemental strand, 49173499 - 49173463
Alignment:
Q  653 aagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||||||||||||||||||||||| ||||||||||    
T  49173499 aagcacttgtgagactatttgagagaacttacgaaaa 49173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 795
Target Start/End: Original strand, 17631152 - 17631223
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagct 795  Q
    ||||||||| |||| | | || |||||| ||||| ||| |||||||||||| ||||||| ||||||||||||    
T  17631152 gcttatgagaacagctcaaagtttacatgaaaacagttagactttattttatcttttgttatagaaatagct 17631223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 689
Target Start/End: Original strand, 43371844 - 43371883
Alignment:
Q  650 cataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  43371844 cataagcacttgtgagactgtttgagagagcttatgaaaa 43371883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 802
Target Start/End: Original strand, 45999354 - 45999417
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacat 802  Q
    |||||||||| || ||| | |||||||||||| ||| ||||||| |||||||||||||| ||||    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacat 45999417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 804
Target Start/End: Complemental strand, 50319274 - 50319231
Alignment:
Q  761 ttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||    
T  50319274 ttgactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 617 - 683
Target Start/End: Complemental strand, 5157222 - 5157156
Alignment:
Q  617 atttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||  |||| |||||||||||||||  ||||||| ||||||||| ||| |||| |||||||||    
T  5157222 atttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagctta 5157156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 863
Target Start/End: Complemental strand, 26679239 - 26679153
Alignment:
Q  778 tttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaagctgttt-tccaaacagg 863  Q
    ||||| ||||||||| ||||||||||||  ||||||| ||||  ||| ||||||| ||||||  || ||||||||| ||||||||||    
T  26679239 tttgttatagaaataacttacacataaacacttatatcataagcgtttatgctatgagcgttcaatcaagctgtttatccaaacagg 26679153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 689
Target Start/End: Original strand, 28837287 - 28837344
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||| |||||||| ||||||||||||||| |||||| ||| ||||| ||||||||||    
T  28837287 atttgagcttatctactgacataagcacttgagagactgtttaagaga-cttacgaaaa 28837344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 796
Target Start/End: Original strand, 30259548 - 30259610
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctt 796  Q
    |||| |||||||||| || ||| | ||||||||||||||||  |||||| |||||||||||||    
T  30259548 acagcttatagcttatatcaaagcagtttgactttattttatattttgttatagaaatagctt 30259610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 689
Target Start/End: Original strand, 49691987 - 49692044
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    ||||||||||||||| || |||||| |||||||||||| ||||||||| |||| |||||    
T  49691987 atttgaacttatctaatg-cataagaacttgtgagactgtttgagagaacttatgaaaa 49692044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 707 - 804
Target Start/End: Original strand, 4549576 - 4549673
Alignment:
Q  707 ataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||  ||||||||||||  |||  |||||||||  || ||||| |||| |||||||| || ||  |||||||||||||||| | ||||||    
T  4549576 ataagctctccaggattgcttatgaaaacatcttatagcttgtatgaaaacagttttactttattatatctgctgtcatagaaatagctaatacataa 4549673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 667
Target Start/End: Original strand, 11217935 - 11217984
Alignment:
Q  618 tttggaccgactcatttgaacttatctattgacataagcacttgtgagac 667  Q
    |||||||||||| |||||| || ||||| |||||| ||||||||||||||    
T  11217935 tttggaccgacttatttgagctaatctactgacatgagcacttgtgagac 11217984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 23373242 - 23373299
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||| |||||||||| |||| ||| |||||||||||||||| | |||| |||||||||    
T  23373242 gacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagctta 23373299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 797
Target Start/End: Original strand, 26293193 - 26293230
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagctta 797  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  26293193 tttgactttattttactttttgttatagaaatagctta 26293230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 626 - 671
Target Start/End: Original strand, 29793627 - 29793672
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatt 671  Q
    |||| |||||| |||||||| |||||||| ||||||||||||||||    
T  29793627 gacttatttgagcttatctactgacataaacacttgtgagactatt 29793672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 795
Target Start/End: Original strand, 31517773 - 31517862
Alignment:
Q  706 cataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagct 795  Q
    |||||||||||| |||  | |||||| ||||| |||||||||| || ||| |  ||| ||||||||||| |||||||  |||||||||||    
T  31517773 cataagctctccaagacagattatgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgttgtagaaatagct 31517862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 668
Target Start/End: Original strand, 33339433 - 33339470
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagact 668  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  33339433 atttgaatttatctattgacaaaagcacttgtgagact 33339470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 679
Target Start/End: Original strand, 34422095 - 34422156
Alignment:
Q  618 tttggaccgactcatttgaacttatctattgacataagcacttgtgagactatttgagagag 679  Q
    |||||||||  | ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||    
T  34422095 tttggaccggtttatttgaatttatctagtgacataagcacttgtgatactctttgatagag 34422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 805
Target Start/End: Original strand, 36151592 - 36151637
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    ||||||||||||||| ||||||| || ||||||||||| |||||||    
T  36151592 tttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 668
Target Start/End: Original strand, 44815237 - 44815274
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagact 668  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  44815237 atttgaacttatctactgacataagcatttgtgagact 44815274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 626 - 681
Target Start/End: Original strand, 3180998 - 3181053
Alignment:
Q  626 gactcatttgaacttatctattgacataagcacttgtgagactatttgagagagct 681  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  3180998 gacttatttgaacttatctacagacataagcacttgtgagactatttgaaagagct 3181053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 725 - 804
Target Start/End: Original strand, 29274281 - 29274360
Alignment:
Q  725 cttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||  ||||||||||||||| || |||||  ||||||||||||||| ||||||  |||||||||||||| ||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataa 29274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 853
Target Start/End: Original strand, 3181105 - 3181251
Alignment:
Q  710 agctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttg---tcatagaaatagcttacacataaaa 806  Q
    |||||||| ||||  |||||||  ||||||||| | ||| || |||||||||||||||||||||| ||||||   | ||| | |||| ||| |||| |      
T  3181105 agctctccaagataacttatgaaaacagtttatggtttatatgaaaacggtttgactttattttatcttttgtaataataaagatagtttatacattacc 3181204  T
Q  807 ccttatatgataaaagttaatgctataagcgttttattaagctgttt 853  Q
    |||||||||||||| |||  ||||||||||| || |||||| |||||    
T  3181205 ccttatatgataaatgtttgtgctataagcgcttaattaagttgttt 3181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 707 - 797
Target Start/End: Complemental strand, 1403032 - 1402942
Alignment:
Q  707 ataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||| |||||  ||| ||||||||  ||| ||||||||||| || ||||  |||| ||||||||||| ||||||| ||||||||||||||    
T  1403032 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaatagctta 1402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 797
Target Start/End: Original strand, 2027457 - 2027530
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||| |||| |||||| ||| || ||||  |||||||||||||||| ||||||| ||| ||||||||||    
T  2027457 gcttatgagaacagcttataggttatatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 846
Target Start/End: Original strand, 31672548 - 31672641
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttattaa 846  Q
    ||||| ||||||||||||||||  ||||||||| ||||||| ||| |||||||  ||| ||||||||  | | | ||||||||||||| |||||    
T  31672548 aaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgataatcgcttaagctataagcgtttaattaa 31672641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 689
Target Start/End: Original strand, 32171330 - 32171375
Alignment:
Q  644 tattgacataagcacttgtgagactatttgagagagcttacgaaaa 689  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||    
T  32171330 tattgacataagcacttgcgagactgtttgagagagcttatgaaaa 32171375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 753 - 840
Target Start/End: Complemental strand, 1497971 - 1497883
Alignment:
Q  753 aaaacggtttgactttattttacctttt-gtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttt 840  Q
    ||||| |||||||||||||||||||||| || | | |||||||||| ||||||   |||| |||||||  ||| |||||||||||||||    
T  1497971 aaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcacttaaatgataagtgtttatgctataagcgttt 1497883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 683
Target Start/End: Original strand, 8420131 - 8420183
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||| ||||||||||||||||| ||||||||||||| || | |||||||||    
T  8420131 atttgagcttatctattgacataaacacttgtgagactgttagtgagagctta 8420183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 805
Target Start/End: Complemental strand, 4420606 - 4420555
Alignment:
Q  754 aaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||| |||||||||||||||| ||||||| |||||| ||||||| |||||||    
T  4420606 aaacagtttgactttattttatcttttgttatagaagtagcttatacataaa 4420555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 863
Target Start/End: Complemental strand, 9027575 - 9027456
Alignment:
Q  745 cttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgttttatt 844  Q
    |||| |||||||| |||||||||||||||| ||| | |  ||||||||||||| | ||||   ||||||| ||||  ||| |||||||||||| ||  ||    
T  9027575 cttatattaaaacagtttgactttattttatcttctattgtagaaatagcttatagataagcacttatataataagtgttcatgctataagcgcttactt 9027476  T
Q  845 aagctgttt-tccaaacagg 863  Q
    || |||||| ||||||||||    
T  9027475 aaactgtttatccaaacagg 9027456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 683
Target Start/End: Original strand, 19752761 - 19752792
Alignment:
Q  652 taagcacttgtgagactatttgagagagctta 683  Q
    ||||||||||||||||||||||||||||||||    
T  19752761 taagcacttgtgagactatttgagagagctta 19752792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 849
Target Start/End: Original strand, 29957990 - 29958087
Alignment:
Q  753 aaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatg--ataaaagttaatgctataagcgttttattaagct 849  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||| || |||||  | |||| |||  ||||||||| ||| ||||||||||| ||||||||    
T  29957990 aaaacagttcgactttattttaccttttgttataaaaatagcatatacatagca-cttagatgatataaaagtttatgatataagcgtttaattaagct 29958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 805
Target Start/End: Original strand, 33500542 - 33500613
Alignment:
Q  734 acagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaa 805  Q
    |||| ||||| |||| ||| |||| |||||| |||| |||| ||||||| |||||||||||||| |||||||    
T  33500542 acagcttataacttatattgaaacagtttgattttactttatcttttgttatagaaatagcttatacataaa 33500613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 680
Target Start/End: Complemental strand, 10031865 - 10031819
Alignment:
Q  634 tgaacttatctattgacataagcacttgtgagactatttgagagagc 680  Q
    |||| ||||||| |||||||||||||||||||||| ||||| |||||    
T  10031865 tgaatttatctactgacataagcacttgtgagactgtttgaaagagc 10031819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 760 - 814
Target Start/End: Original strand, 24836286 - 24836340
Alignment:
Q  760 tttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatat 814  Q
    ||||||||||||||| ||||||| ||||||||| |||| |||||||  |||||||    
T  24836286 tttgactttattttatcttttgttatagaaataacttatacataaatacttatat 24836340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 704 - 806
Target Start/End: Original strand, 33787776 - 33787878
Alignment:
Q  704 tccataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacata 803  Q
    |||||||||||||| ||||  |||||||  |||| ||||| |||| || ||| |  ||||||||| |||||  |||||| |||||||||| ||| |||||    
T  33787776 tccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacata 33787875  T
Q  804 aaa 806  Q
    |||    
T  33787876 aaa 33787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 797
Target Start/End: Original strand, 281899 - 281972
Alignment:
Q  724 gcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagctta 797  Q
    ||||||||  |||| |||||||||| || |||||   |||||||||||||| ||||||| |||| |||||||||    
T  281899 gcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaatagctta 281972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 707 - 836
Target Start/End: Complemental strand, 2206626 - 2206497
Alignment:
Q  707 ataagctctccgagattgcttatgaggacagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaa 806  Q
    |||| |||||| |||| |||||||   |||||| |||||||| || |||||  ||  ||||||||||| ||||||| ||| ||||| |||| ||| |||     
T  2206626 ataaactctccaagatagcttatgtaaacagttcatagcttatataaaaacaattatactttattttatcttttgttataaaaataacttatacagaaat 2206527  T
Q  807 ccttatatgataaaagttaatgctataagc 836  Q
     |||||| ||||| || | |||||||||||    
T  2206526 gcttatacgataagagcttatgctataagc 2206497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 804
Target Start/End: Complemental strand, 2514686 - 2514641
Alignment:
Q  759 gtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||||||||| ||||| | |||||||||||||| ||||||    
T  2514686 gtttgactttattttatcttttattatagaaatagcttatacataa 2514641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 739 - 804
Target Start/End: Original strand, 10452426 - 10452491
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||| || ||||  |||||| |||||||||  |||||| |||||||||||||| ||||||    
T  10452426 ttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataa 10452491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 739 - 804
Target Start/End: Original strand, 32206086 - 32206151
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataa 804  Q
    |||||||||| | |||||   ||| ||||||||| | ||||||||||||| |||||||||||||||    
T  32206086 ttatagcttatactaaaataatttaactttatttcatcttttgtcatagagatagcttacacataa 32206151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 638 - 683
Target Start/End: Original strand, 34538159 - 34538204
Alignment:
Q  638 cttatctattgacataagcacttgtgagactatttgagagagctta 683  Q
    |||||||| | | |||||||||||||||||||||||||||| ||||    
T  34538159 cttatctactcatataagcacttgtgagactatttgagagatctta 34538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 739 - 863
Target Start/End: Complemental strand, 27580 - 27455
Alignment:
Q  739 ttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataaaagttaatgctataagcgt 838  Q
    |||||| ||| || |||||  ||||||||||||||| ||| ||| ||||||||| |||| ||||||   |||| ||||||| || | |||||||||||||    
T  27580 ttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcgt 27481  T
Q  839 tttattaagctgttt-tccaaacagg 863  Q
    ||  ||||| ||||| ||||||||||    
T  27480 ttatttaagttgtttatccaaacagg 27455  T

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Target: scaffold0428 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 631 - 673
Target Start/End: Complemental strand, 4042 - 4000
Alignment:
Q  631 atttgaacttatctattgacataagcacttgtgagactatttg 673  Q
    |||||||||||| |||||| |||||||||||||||||| ||||    
T  4042 atttgaacttatatattgatataagcacttgtgagactgtttg 4000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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