View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5413-Insertion-11 (Length: 228)
Name: NF5413-Insertion-11
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5413-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 25657817 - 25657597
Alignment:
| Q |
8 |
ctctcgttagatctggatgttggcatgtccatttatgttgctcggtttaaaaagctgatgttgccttcctcttggaggattgtttaattaggtatctcaa |
107 |
Q |
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| T |
25657817 |
ctctcgttagatctggatgttggcatgtcgatttatgttgctcggtttaaaaagctgacgttgccttcctcttggaggattgtttaattgggtatctcaa |
25657718 |
T |
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| Q |
108 |
aatcggatctatcaaagatttggtggtttcgttttaaaatgtgttccatgtgttcacgtctatgttggttagattgagagagatgtttgagcggcctcct |
207 |
Q |
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|| ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
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| T |
25657717 |
aaccggatctatcaaagattcggtggttttgttttaaaacgtgttccatgtgttcacgtctgtgttggttagattgagagagatgtttgagcgacctcct |
25657618 |
T |
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| Q |
208 |
tccgcggtggttactagtagg |
228 |
Q |
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| T |
25657617 |
tccgcggtggttactagtagg |
25657597 |
T |
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