View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5413-Insertion-7 (Length: 252)
Name: NF5413-Insertion-7
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5413-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 41941275 - 41941524
Alignment:
| Q |
6 |
cacttgcatggttaaaaatggaaagagaaaattttccttccctcctaaccatactagcagcta--cataggttctactggatatgatgtaacaaaaaacc |
103 |
Q |
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| T |
41941275 |
cacttgcatggttaaaaatggaaagagaaaattttccttccctcctaaccatactagcagctatacataggttctactggatatgatgtaacaaaaaacc |
41941374 |
T |
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| Q |
104 |
gatatgaaaagatcatgttcctattaattaaggtatactagtgctagtgagattgtacttatacttaattccaattgcagagaaactcacgtgcatgttt |
203 |
Q |
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| T |
41941375 |
gatatgaaaagatcatgttcctattaattaaggtatactagtgctagtgagattgtacttatacttaattccaattgcagagaaactcacgtgcatgttt |
41941474 |
T |
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| Q |
204 |
aaactttaaaataaaa-gctctatgatttttggtaagaagtttcaaaagt |
252 |
Q |
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| T |
41941475 |
aaactttaaaataaaaggctctatgatttttggtaagaagtttcaaaagt |
41941524 |
T |
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