View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5413_high_45 (Length: 270)
Name: NF5413_high_45
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5413_high_45 |
 |  |
|
| [»] scaffold0089 (1 HSPs) |
 |  |  |
|
| [»] scaffold0311 (1 HSPs) |
 |  |  |
|
| [»] scaffold0147 (2 HSPs) |
 |  |  |
|
| [»] scaffold0254 (1 HSPs) |
 |  |  |
|
| [»] scaffold0159 (1 HSPs) |
 |  |  |
|
| [»] scaffold0153 (2 HSPs) |
 |  |  |
|
| [»] scaffold0286 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6537018 - 6536936
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaattttatgaaaacataacgaaagtaatttgactt |
83 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6537018 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaattttatgaaaacataacgaaagtaatttgactt |
6536936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4420714 - 4420671
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4420714 |
atgacatgttcataagctgttttcagcttatttccataagctct |
4420671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27909637 - 27909680
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
27909637 |
atgacatgtccataagttgttttcagcttatttccataagctct |
27909680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9027649 - 9027604
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttc |
46 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9027649 |
atgacatgtccataagttgttttcagcttattttcataagctcttc |
9027604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34403926 - 34403882
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
34403926 |
atgacatgttcataaggtgttttcaccttatttccataagctctt |
34403882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 821496 - 821449
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||| |||||||| |
|
|
| T |
821496 |
atgacatgttcataagtcgttttcagcttatttctataacctcttcag |
821449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7785743 - 7785786
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
7785743 |
atgacatgtctataagttgttttcagcttatttccataagctct |
7785786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7931725 - 7931768
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
7931725 |
atgacatgttcttaagttgttttcagcttatttccgtaagctct |
7931768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 20512654 - 20512689
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
20512654 |
ataagttgttttcagcttatttccataagctcttca |
20512689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13908534 - 13908488
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| ||||||||||||| |
|
|
| T |
13908534 |
atgacatgttcgtaagctgttttcagcttattttcataagctcttca |
13908488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30863317 - 30863271
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
30863317 |
atgacatgtacataagttgttttcagcttacttctataagctcttca |
30863271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31583750 - 31583709
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
31583750 |
atgacatgtccataagttgttttcaacttatttccataagct |
31583709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8473633 - 8473574
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctcttcaga-attttatgaaaa |
61 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| || |||||||| ||| |||||||||||| |
|
|
| T |
8473633 |
tgacatgttcataagttgtttt-agcttattttcaaaagctcttaagatattttatgaaaa |
8473574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17241254 - 17241294
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
17241254 |
acatgttcataagttgttttcaacttatttccataaactct |
17241294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33887901 - 33887861
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagc |
41 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
33887901 |
atgacatgttcacaagttgttttcaacttatttccataagc |
33887861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 281847 - 281890
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
281847 |
atgacatgtctataagttgttttcagcttatttccatgagctct |
281890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2167157 - 2167200
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
2167157 |
atgatatgtccataagttgttttcagcttatttccataatctct |
2167200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2178790 - 2178833
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
2178790 |
atgatatgtccataagttgttttcagcttatttccataatctct |
2178833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6647458 - 6647415
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
6647458 |
atgacatgttcataagatgttttcaacttattttcataagctct |
6647415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 7931800 - 7931831
Alignment:
| Q |
13 |
taagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
7931800 |
taagttgttttcagcttatttccataagctct |
7931831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9667984 - 9668027
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
9667984 |
atgacatgtccataagctgttttcaacttatttccataagctct |
9668027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 28641751 - 28641798
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||||||||| |||||| ||||||||| |||||||||| |||||| |
|
|
| T |
28641751 |
acatgttcataagctgtttttagcttattttcataagctctgcagaat |
28641798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 34939572 - 34939537
Alignment:
| Q |
13 |
taagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
34939572 |
taagttgttttcagcttatttccataacctcttcag |
34939537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34939815 - 34939772
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| |||| |
|
|
| T |
34939815 |
atgacatgtccataaattgttttcagcttatttccataaactct |
34939772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 821870 - 821833
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccata |
38 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
821870 |
atgacatgttcataagctgttttcagcttattttcata |
821833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29296294 - 29296335
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| |||||||| |
|
|
| T |
29296294 |
atgacatgtccataagttattttcagcttattttcataagct |
29296335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 31421008 - 31420975
Alignment:
| Q |
9 |
ttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
31421008 |
ttcataagttgttttcagcttattttcataagct |
31420975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1408277 - 1408309
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
1408277 |
ataacttgttttcagcttatttccataagctct |
1408309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2112271 - 2112231
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagc |
41 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| |||||| |
|
|
| T |
2112271 |
atgacatgttcataagttgttttcggtttatttctataagc |
2112231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 2160938 - 2160974
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
2160938 |
gacatgtccataagttgttttcaacttatttccataa |
2160974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 3217200 - 3217228
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3217200 |
ataagttgttttcagcttatttccataag |
3217228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30524008 - 30523964
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||| ||| ||||| ||| ||||||||||||||||||||| |
|
|
| T |
30524008 |
atgacatgtccattagttgcttttagcttatttccataagctctt |
30523964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 41)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45432938 - 45432981
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45432938 |
atgacatgttcataagttgttttcagcttatttccataagctct |
45432981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42745109 - 42745068
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
42745109 |
atgacatgttcataagttgttttcatcttatttccataagct |
42745068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21862177 - 21862217
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21862177 |
acatgtccataagttgttttcagcttatttccataagctct |
21862217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 13371177 - 13371142
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
13371177 |
ataagttgttttcagcttatttccataagctcttca |
13371142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24785276 - 24785233
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
24785276 |
atgacatgttcataagttgtttttagcttatttacataagctct |
24785233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33883749 - 33883788
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
33883749 |
atgacatgttcataagttgttttcagcttattttcataag |
33883788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36101639 - 36101592
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| |||||||||||||| |
|
|
| T |
36101639 |
atgacatgttcacaagctgttttcagcttattttcataagctcttcag |
36101592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36200167 - 36200124
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
36200167 |
atgacatgtccataagttgttttcagcttatttccatgagctct |
36200124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37825193 - 37825150
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
37825193 |
atgacatgtccataagttgttttcaggttatttccataagctct |
37825150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43115127 - 43115084
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
43115127 |
atgacatgtccataacttgttttcagcttatttccataagctct |
43115084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36139949 - 36139903
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
36139949 |
atgacatgttcacaagctgttttcagcttattttcataagctcttca |
36139903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11039338 - 11039379
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
11039338 |
atgacatgtccataagttgttttcagcttatctccataagct |
11039379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36887574 - 36887529
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |||||| |
|
|
| T |
36887574 |
tgacatgttcataagatgttttcagcttattttcataagttcttca |
36887529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5292530 - 5292562
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
5292530 |
ataagttgttttcagcttatttccataagctct |
5292562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3044258 - 3044301
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
3044258 |
atgacatgttcataagctgttttcaacttattttcataagctct |
3044301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20669243 - 20669200
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
20669243 |
atgacatgttcataagctgttttccgcttatttacataagctct |
20669200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21574561 - 21574518
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| || ||| |||||||||||||||||||| |
|
|
| T |
21574561 |
atgacatgttcataagctgcttttagcttatttccataagctct |
21574518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25925813 - 25925770
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
25925813 |
atgacatgttcataagctgttttcaacttattttcataagctct |
25925770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 29771907 - 29771868
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
29771907 |
gacatgtccataagttgttttcaacttatttccataagct |
29771868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31010473 - 31010430
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| ||||||||||||| ||||||||||||| |
|
|
| T |
31010473 |
atgacatgtccataagctgttttcagcttaattccataagctct |
31010430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37273205 - 37273166
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
37273205 |
atgacatgtccataagttgttttcaacttatttccataag |
37273166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 42
Target Start/End: Complemental strand, 38462342 - 38462311
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
38462342 |
cataagttgttttcagcttatttccataagct |
38462311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40665500 - 40665457
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
40665500 |
atgacatgttcataagctgttttcagcttatttttataagctct |
40665457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50952404 - 50952361
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
50952404 |
atgacatgttcataaactgttttaagcttatttccataagctct |
50952361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52412903 - 52412946
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
52412903 |
atgacatgtttataagctgttttcagcttatttccatatgctct |
52412946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14548720 - 14548770
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||| || ||| | ||||||||||||||||||||||||||| |||||| |
|
|
| T |
14548720 |
atgacattttaataggctgttttcagcttatttccataagctctccagaat |
14548770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48048981 - 48049019
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
48048981 |
atgacatgtccataagctgttttcagcttatttccataa |
48049019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52440661 - 52440707
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||||||||| || |||| |||||| |||||| |
|
|
| T |
52440661 |
atgacatgttcataagttgttttcaactaattttcataagttcttca |
52440707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 23785316 - 23785283
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
23785316 |
cataagttgttttcagcttgtttccataagctct |
23785283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34954153 - 34954112
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||| || |||||||||||||||| |||||||| |
|
|
| T |
34954153 |
atgacatgttcatgagctgttttcagcttattttcataagct |
34954112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50004723 - 50004682
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
50004723 |
atgacatgttcttaagctgttttcagcttatttcaataagct |
50004682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2318713 - 2318673
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||| ||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
2318713 |
acatggtcagaagttgttttcagcttatttctataagctct |
2318673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5166394 - 5166350
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| |||| |||||| |
|
|
| T |
5166394 |
atgacatgttcataagctgttttcatcttattttcatacgctctt |
5166350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12923324 - 12923356
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
12923324 |
atgacatgtccataagttgttttcagcttattt |
12923356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 26330323 - 26330363
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
26330323 |
tgacatgttcataggttcttttcaggttatttccataagct |
26330363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 27792932 - 27792900
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
27792932 |
ataagttgttttcagcttatttctataagctct |
27792900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36445896 - 36445856
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagc |
41 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
36445896 |
atgacatgttcattagttgttttcatcttattttcataagc |
36445856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41724283 - 41724251
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
41724283 |
atgacatgtccataagttgttttcagcttattt |
41724251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 44747173 - 44747201
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagctt |
29 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
44747173 |
atgacatgttcataagttgttttcagctt |
44747201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 53736122 - 53736166
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||| | |||||| |
|
|
| T |
53736122 |
acatgttcataagttgctttcagcttattttcataaacacttcag |
53736166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 55113598 - 55113570
Alignment:
| Q |
82 |
ttatcatgataaacacttatgctataagc |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
55113598 |
ttatcatgataaacacttatgctataagc |
55113570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 40)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17258882 - 17258946
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca |
63 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| |
|
|
| T |
17258882 |
atgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaaca |
17258946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12521599 - 12521553
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12521599 |
atgatatgttcataagctgttttcagcttatttccataagctcttca |
12521553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35963312 - 35963266
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
35963312 |
atgacatgtccataagttgttttcagcttatttccataagcttttca |
35963266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37526198 - 37526247
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaa |
50 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
37526198 |
atgacatgttaataagctgttttcagcttatttccataagctctccagaa |
37526247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19138716 - 19138759
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
19138716 |
atgacatgtacataaattgttttcagcttatttccataagctct |
19138759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33533538 - 33533581
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33533538 |
atgacatattcataagttgttttcaacttatttccataagctct |
33533581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36638818 - 36638775
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
36638818 |
atgacatgttcataagcttttttcagcttatttccataagctct |
36638775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37690635 - 37690678
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
37690635 |
atgacatgttaataagctgttttcagcttatttccataagctct |
37690678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1899225 - 1899187
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1899225 |
atgacatgtgcataagttgttttcagcttatttccataa |
1899187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2880546 - 2880596
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||| |||||| |||| |
|
|
| T |
2880546 |
atgatatgttcataaggtgttttcagcttatttccataaactcttctgaat |
2880596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 5951978 - 5952031
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
5951978 |
ataagttgttttcagcttatttccataagctattcagtataatttatgaaaaca |
5952031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 11615568 - 11615530
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagctc |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11615568 |
catgttcataagctgttttcagcttatttccataagctc |
11615530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37588359 - 37588409
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
37588359 |
atgaaatgttaataagctgttttcagcttatttccataagctctccagaat |
37588409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37611215 - 37611257
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
37611215 |
tgacatgttcataagctgttttcaggttatttccataagctct |
37611257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37787945 - 37787987
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
37787945 |
tgacatgttcataagctgttttcaggttatttccataagctct |
37787987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 1084125 - 1084166
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
1084125 |
atgttcatgagttgtttttagcttatttccataagctcttca |
1084166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 16457613 - 16457645
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttc |
34 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
16457613 |
tgacatgttcataagttgttttcagcttatttc |
16457645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 38104867 - 38104899
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
38104867 |
ataagttgttttcagcttatttccataagctct |
38104899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 499730 - 499773
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||| |||| |
|
|
| T |
499730 |
atgacatgttaacaagttgttttcagcttatttccataaactct |
499773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6109554 - 6109511
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
6109554 |
atgatatgtccataagttgttttcagcttatttccaaaagctct |
6109511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 8651355 - 8651394
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctc |
43 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
8651355 |
acatgtccataagttgttttcagcatatttccataagctc |
8651394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10125717 - 10125760
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||| |||||||||| |
|
|
| T |
10125717 |
atgacatgttgataaggtgttttcagcttattttcataagctct |
10125760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11707126 - 11707083
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| || ||||||| |
|
|
| T |
11707126 |
atgacatgtttataagttgttttcagcttattttcaaaagctct |
11707083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 15074750 - 15074789
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
15074750 |
gacatgtccataagctgttttcagcttatttccataagct |
15074789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 20028500 - 20028535
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
20028500 |
ataagttgttttcagcttatttctataagctcttca |
20028535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32408591 - 32408638
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||| | ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
32408591 |
atgacatgtccgtaagttggtttctgcttatttccataagctcttcag |
32408638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 39607546 - 39607511
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
39607546 |
ataagttgttttcagcttatttcgataagctcttca |
39607511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3504815 - 3504765
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| |||||||||| |||||| |
|
|
| T |
3504815 |
atgacatgtttgtaagctgttttcagcttatttacataagctctccagaat |
3504765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13604848 - 13604894
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
13604848 |
atgacatgtccatacgttgttttcaacttattttcataagctcttca |
13604894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 19460633 - 19460595
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
19460633 |
atgttcataagatgttttcagctcatttccataagctct |
19460595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28413288 - 28413326
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
28413288 |
atgttcataagctgttttcagcttatttccataaactct |
28413326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 9106884 - 9106851
Alignment:
| Q |
9 |
ttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
9106884 |
ttcataagctgttttcagcttatttccataagct |
9106851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10303867 - 10303826
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
10303867 |
atgacatgtccataagttgttgtcagcttattttcataagct |
10303826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12467204 - 12467163
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
12467204 |
atgacatgtttataagctgttttcagcttattttcataagct |
12467163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 18704046 - 18704079
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
18704046 |
ataagttgttttcagcttatttccataagatctt |
18704079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 8089734 - 8089698
Alignment:
| Q |
81 |
cttatcatgataaacacttatgctataagccacaaat |
117 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
8089734 |
cttatcatgataaacacttatgctatgagctacaaat |
8089698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17369438 - 17369482
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
17369438 |
atgacatgtctataagttgttttcagattatttctataagctctt |
17369482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 18906403 - 18906367
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
18906403 |
cataagttgttttcagcttatttcgataagcttttca |
18906367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30653373 - 30653416
Alignment:
| Q |
1 |
atgacatgttcataa--gttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
30653373 |
atgacatgttcataaaagctgttttcagcttatttccataagct |
30653416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 40590818 - 40590786
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
40590818 |
ataagttgttttgagcttatttccataagctct |
40590786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 68)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 48748321 - 48748361
Alignment:
| Q |
8 |
gttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48748321 |
gttcataagttgttttcagcttatttccataagctcttcag |
48748361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10199407 - 10199450
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10199407 |
atgacatgttcataagttgttttcagcttattttcataagctct |
10199450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37593683 - 37593729
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
37593683 |
atgacatgttcataagctgttttcagcttattttcataagctcttca |
37593729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6292564 - 6292521
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
6292564 |
atgacatgttcataagctgttttcagcttattttcataagctct |
6292521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25479652 - 25479609
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
25479652 |
atgacatgttcattagttgttttcagcttattttcataagctct |
25479609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27140549 - 27140506
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
27140549 |
atgacatgtccataagttgttttcagcttatttgcataagctct |
27140506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28935875 - 28935922
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||| |||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
28935875 |
atgacatgtccataagttttttttagcttatttccataagctcttcag |
28935922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31118114 - 31118075
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31118114 |
atgacatgttcatcagttgttttcagcttatttccataag |
31118075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31517739 - 31517782
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
31517739 |
atgacatgttcataagctgttttcagcttattttcataagctct |
31517782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46252681 - 46252724
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
46252681 |
atgacatgttcataagttgttttcaggttattttcataagctct |
46252724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 7262518 - 7262564
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
7262518 |
tgacatgttcataagctgttttcaccttatttccacaagctcttcag |
7262564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14629965 - 14630003
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14629965 |
atgatatgttcataagttgttttcagcttatttccataa |
14630003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 15361106 - 15361068
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15361106 |
atgttcataagttgttttcagcttattttcataagctct |
15361068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28077073 - 28077111
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28077073 |
atgttcataagttgttttcagcttatttcaataagctct |
28077111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29007715 - 29007761
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
29007715 |
atgatatgttcataagttgttttcagcttatttcgataagcttttca |
29007761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34290307 - 34290261
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
34290307 |
atgacatattcataagttgttttcagcttattttcataagttcttca |
34290261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38170689 - 38170735
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| | ||||||||||| |
|
|
| T |
38170689 |
atgacatgttcataagttgttttcagcttgttttcctaagctcttca |
38170735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 43954053 - 43954091
Alignment:
| Q |
10 |
tcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43954053 |
tcataagttgttttcagcttatctccataagctcttcag |
43954091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 219556 - 219597
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
219556 |
tgttcataagctgttttcagctcatttccataagctcttcag |
219597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4549301 - 4549260
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4549301 |
atgacatgtctataagttgttttcagcttatttccataagct |
4549260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12477286 - 12477323
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccata |
38 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12477286 |
atgacatgtccataagttgttttcagcttatttccata |
12477323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28689451 - 28689492
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
28689451 |
atgacatgtccataagttgttttcagcttattttcataagct |
28689492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30257754 - 30257690
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca |
63 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||| || ||| || |||||||||||| |
|
|
| T |
30257754 |
atgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaaca |
30257690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 32182337 - 32182296
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
32182337 |
atgttcataagtttttttcagcttatttccttaagctcttca |
32182296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33723381 - 33723422
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
33723381 |
atgacatgttcatgagatgttttcagcttatttccataagct |
33723422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 39347970 - 39348007
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
39347970 |
catgtccataagttgttttcagcttatttccataagct |
39348007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47877180 - 47877139
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
47877180 |
atgacatgctcataagttgttttcagcttattttcataagct |
47877139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 5047215 - 5047171
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||| |||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
5047215 |
gacatattcatacgctgttttcagcttatttccataagctcttca |
5047171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5886993 - 5887025
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
5886993 |
atgacatgttcataagttgttttcagcttattt |
5887025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 6279467 - 6279427
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
6279467 |
acatgtccataagttgttttcagcgtatttccataagctct |
6279427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 11893602 - 11893638
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11893602 |
cataagttgttttcagcttatttccataaactcttca |
11893638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 16322910 - 16322874
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16322910 |
cataagttgtttttagcttatttccataagctcttca |
16322874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 26916262 - 26916222
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
26916262 |
cataagttgtttccagcttatttccataagctctccagaat |
26916222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 32859948 - 32859988
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
32859948 |
acatgttcataaattgttttcagcttgtttccataagctct |
32859988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 35590898 - 35590934
Alignment:
| Q |
8 |
gttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35590898 |
gttcatcagttgttttcagcttatttccataagctct |
35590934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 47885039 - 47885071
Alignment:
| Q |
8 |
gttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
47885039 |
gttcataagttgttttcagcttatttccataag |
47885071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 625632 - 625593
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
625632 |
ataagttgttttcaacttatttctataagctcttcagaat |
625593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3924695 - 3924648
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||| ||||| ||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
3924695 |
atgaaatgtttataagttgttttcggcttatttccataaactcttcag |
3924648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4549919 - 4549888
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatt |
32 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
4549919 |
atgacatgttcataagttgttttcagcttatt |
4549888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4699614 - 4699657
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| ||||||||| |
|
|
| T |
4699614 |
atgacatgttcataagctgtttttagcttatttctataagctct |
4699657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6932960 - 6933007
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||| ||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
6932960 |
atgatatgttcataagttagtttcagtttatttccataagctcttcag |
6933007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8016328 - 8016285
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
8016328 |
atgacatgttcataacttgttttcagcttattttcctaagctct |
8016285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 23902070 - 23902109
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
23902070 |
catgtgcataagttgttttcagcttacttccataagctct |
23902109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26184819 - 26184776
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
26184819 |
atgacatgtccataagctgttttcagattatttccataagctct |
26184776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30371219 - 30371176
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
30371219 |
atgacatgtccataagttgttttcagcttatttcaatacgctct |
30371176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35017647 - 35017604
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||||| |||||| |||||||||||||||||| |
|
|
| T |
35017647 |
atgacatgtccataagttattttcaacttatttccataagctct |
35017604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35925761 - 35925718
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||| |||| |
|
|
| T |
35925761 |
atgacatgttcataagctgttttcaacttatttccataaactct |
35925718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 42397792 - 42397749
Alignment:
| Q |
5 |
catgttcataagttgttttcagctt-atttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
42397792 |
catgttcataagttgttttcagcttaatttccataagcacttca |
42397749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3223738 - 3223697
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctc |
43 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
3223738 |
atgacatgtttataagttgttttcagcttattt-cataagctc |
3223697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 6659580 - 6659542
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
6659580 |
atgtccataagttgttttcagcttatttcgataagctct |
6659542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15579553 - 15579515
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
15579553 |
atgacatgtccataagttgttctcagcttatttccataa |
15579515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30815652 - 30815698
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |||||| |
|
|
| T |
30815652 |
atgacatgttcataaaatgttttcagcttattttcataagttcttca |
30815698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44031998 - 44032044
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| |||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
44031998 |
atgacatgtccataagctattttcagctaatttccataagctcttca |
44032044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 4025148 - 4025119
Alignment:
| Q |
8 |
gttcataagttgttttcagcttatttccat |
37 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
4025148 |
gttcataagttgttttcagcttatttccat |
4025119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 33108631 - 33108664
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
33108631 |
cataagttgttttcaacttatttccataagctct |
33108664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34278692 - 34278725
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttc |
34 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |
|
|
| T |
34278692 |
atgacatgttcataggttgttttcagcttatttc |
34278725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 38266461 - 38266502
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
38266461 |
gacatgttcataatttgttttcaacttatttctataagctct |
38266502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 38503470 - 38503503
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
38503470 |
tgttcataagttgttttcagcttattttcataag |
38503503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47917307 - 47917274
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttc |
34 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
47917307 |
atgacatgttcataagttgttttcaacttatttc |
47917274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 4768830 - 4768866
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
4768830 |
gacatgtccataacttgttttcagcttatttccataa |
4768866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 6102219 - 6102187
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
6102219 |
tgttcataaattgttttcagcttatttccataa |
6102187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 12564509 - 12564537
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
12564509 |
ataagttgttttcagcttatttccataag |
12564537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 15558285 - 15558249
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
15558285 |
acatgctcataagttgttttcagcttatttctataag |
15558249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 23402087 - 23402059
Alignment:
| Q |
16 |
gttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
23402087 |
gttgttttcagcttatttccataagctct |
23402059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29635418 - 29635386
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
29635418 |
atgacatgtttataagttgttttcagcttattt |
29635386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 33722411 - 33722443
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
33722411 |
ataagttgttttcagcttatttccataacctct |
33722443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 44815313 - 44815345
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
44815313 |
ataaattgttttcagcttatttccataagctct |
44815345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 49125904 - 49125872
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
49125904 |
ataagttgttttcagcttgtttccataagctct |
49125872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 36)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11000575 - 11000622
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
11000575 |
atgacttgttcataagttgtcttcagcttatttccataagctcttcag |
11000622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41606902 - 41606945
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
41606902 |
atgacatgttcaaaagttgttttcagcttatttccataagctct |
41606945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6950393 - 6950349
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6950393 |
atgacatgtcgataagttgttttcagcttatttccataagctctt |
6950349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 42215084 - 42215124
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42215084 |
acatgttcataagttgttttcagcttatttacataagctct |
42215124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20672821 - 20672778
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
20672821 |
atgacatgttcataagctgttttcagcttattttcataagctct |
20672778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25869265 - 25869308
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
25869265 |
atgacatgtccataagttgttttcagcttatttccataaactct |
25869308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30389170 - 30389131
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30389170 |
atgacatgttcataagttgttttcagcttattttcataag |
30389131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 30918176 - 30918141
Alignment:
| Q |
9 |
ttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
30918176 |
ttcataagttgttttcagcttatttccataagctct |
30918141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13000423 - 13000464
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
13000423 |
atgacatgtccacaagttgttttcagcttatttccataagct |
13000464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2235655 - 2235699
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||||||||||| ||||| |||| |||||||||||||||| |
|
|
| T |
2235655 |
atgacatgttcataagtcgtttttagctcatttccataagctctt |
2235699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 8060733 - 8060697
Alignment:
| Q |
8 |
gttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8060733 |
gttcataagttattttcagcttatttccataagctct |
8060697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11185289 - 11185249
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
11185289 |
acatgttcataagttgttttcaacttatttccatcagctct |
11185249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 2458569 - 2458608
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
2458569 |
catgttcataagctgttttcagtttatttccataagctct |
2458608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2594996 - 2595027
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatt |
32 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
2594996 |
atgacatgttcataagttgttttcagcttatt |
2595027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9835899 - 9835938
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
9835899 |
atgacatgttcataagctgttttcatcttatttccataag |
9835938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10383956 - 10383913
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
10383956 |
atgacattttcataagctgtttacagcttatttccataagctct |
10383913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11795163 - 11795120
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
11795163 |
atgacatgtccataacctgttttcagcttatttccataagctct |
11795120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28769338 - 28769381
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
28769338 |
atgatatgtccataagttgttttcagcttatttccataaactct |
28769381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42215305 - 42215348
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||| |||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
42215305 |
atgacttgttcataagctgttttcagcttatttacataagctct |
42215348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4281617 - 4281579
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
4281617 |
atgacatgttcataagttgttttcatcttattttcataa |
4281579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30191140 - 30191178
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
30191140 |
atgacatgttcaaaacttgttttcagcttatttccataa |
30191178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 926546 - 926505
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
926546 |
atgacatgttcataagccgttttcagcttatttccacaagct |
926505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3254296 - 3254263
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttc |
34 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
3254296 |
atgacatgttcataagctgttttcagcttatttc |
3254263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 3536950 - 3536983
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
3536950 |
tgttcataaattgttttcagcttatttccataag |
3536983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5231872 - 5231811
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcaga-attttatgaaaa |
61 |
Q |
| |
|
||||||||| ||| || |||||||| |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
5231872 |
atgacatgtccatgagctgttttcatcttatttcgataagctcttcggatattttatgaaaa |
5231811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 30277254 - 30277287
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
30277254 |
cataagttgttttcagcttatttccataaactct |
30277287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43704375 - 43704416
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
43704375 |
atgacatgttcataaactgttttaagcttatttccataagct |
43704416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 44401630 - 44401593
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44401630 |
gacatgttcatacattgttttcagcttatttccataag |
44401593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 779060 - 779092
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
779060 |
atgacatgttcataagttgttttcatcttattt |
779092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3600737 - 3600777
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagc |
41 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| ||||||| |
|
|
| T |
3600737 |
atgacatgtccataagttgttttcaacttattttcataagc |
3600777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 7039867 - 7039835
Alignment:
| Q |
15 |
agttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
7039867 |
agttgttttcaacttatttccataagctcttca |
7039835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 11183605 - 11183573
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
11183605 |
ataagctgttttcagcttatttccataagctct |
11183573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11569456 - 11569488
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
11569456 |
atgacatgtacataagttgttttcagcttattt |
11569488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12851244 - 12851204
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
12851244 |
acatgttcataagatgttttcggcttattttcataagctct |
12851204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14339604 - 14339644
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagc |
41 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| ||||||| |
|
|
| T |
14339604 |
atgacatgtccataagttgttttcaacttattttcataagc |
14339644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14949937 - 14949893
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
14949937 |
atgacatgtccataagctgttttcagcttatttctataatctctt |
14949893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1137783 - 1137740
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1137783 |
atgacatgttcataagttgttttcagtttatttccataagctct |
1137740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7694009 - 7694052
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7694009 |
atgacatgttcataagttgttttcagcttatttccataaactct |
7694052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8469376 - 8469413
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccata |
38 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8469376 |
atgacatgttcataagttgttttcagcttatttccata |
8469413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 43824350 - 43824313
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43824350 |
catgttcataagttgttttcagcttatttccataagct |
43824313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 24929560 - 24929521
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24929560 |
catgttcataaattgttttcagcttatttccataagctct |
24929521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29263441 - 29263398
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29263441 |
atgatatgttcataagttgttttcagcttatttccacaagctct |
29263398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 5131254 - 5131292
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5131254 |
atgtccataagttgttttcagcttatttccataagctct |
5131292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23819160 - 23819114
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
23819160 |
atgacatgtccataagttgttttcatcttatttctataagctcttca |
23819114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28300298 - 28300344
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
28300298 |
atgacatgttcttaagttgttttcaacttattttcataagctcttca |
28300344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24747390 - 24747353
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccata |
38 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24747390 |
atgacatgttcataagttgttttcagcttattttcata |
24747353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 45732742 - 45732701
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
45732742 |
gacatgttcatatgatgttttcagcttatttccataagctct |
45732701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 47146028 - 47145987
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
47146028 |
atgttcataagttgttttcaccttattttcataagctcttca |
47145987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49486531 - 49486490
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
49486531 |
atgacatgttcataagttgtttttagcgtatttccataagct |
49486490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 2592320 - 2592351
Alignment:
| Q |
13 |
taagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
2592320 |
taagttgttttcagcttatttccataagctct |
2592351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29467623 - 29467666
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| |||| |
|
|
| T |
29467623 |
atgacatgtccataagctgttttcagcttatttccataaactct |
29467666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6428089 - 6428043
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| ||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
6428089 |
atgacatgtccataagttgatttaagcatatttccataagctcttca |
6428043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 17884134 - 17884096
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
17884134 |
atgttcataagttgttttcagctaattttcataagctct |
17884096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 18628555 - 18628585
Alignment:
| Q |
14 |
aagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
18628555 |
aagttgttttcagcttatttccataagctct |
18628585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20105430 - 20105479
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||| |||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
20105430 |
atgacatattcataagct-ttttcagcttatttacataagctcttcagaat |
20105479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 33534169 - 33534211
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||| | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
33534169 |
tgacatatccataagttgttttcagcttattttcataagctct |
33534211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 35406013 - 35405975
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
35406013 |
atgttcataagctgttttcagcttacttccataagctct |
35405975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35743353 - 35743307
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
35743353 |
atgacatgtttataagttgtttccaacttatttccataaactcttca |
35743307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43932506 - 43932456
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| || ||| |||||||||| |
|
|
| T |
43932506 |
atgacatgtccataagttgttttcatcttattttcacaagttcttcagaat |
43932456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 45738139 - 45738105
Alignment:
| Q |
10 |
tcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
45738139 |
tcataagatgttttcagcttatttccataagctct |
45738105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 46110265 - 46110231
Alignment:
| Q |
10 |
tcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
46110265 |
tcataagttgttttcagcttatttctataagctct |
46110231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 49219200 - 49219166
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctctt |
45 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
49219200 |
cataagttgttttcagcttatttccataatctctt |
49219166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 53673662 - 53673700
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
53673662 |
atgtccataagttgttttcagcttatttacataagctct |
53673700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 19429770 - 19429737
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
19429770 |
cataagctgttttcagcttatttccataagctct |
19429737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 37575944 - 37575981
Alignment:
| Q |
10 |
tcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
37575944 |
tcataagttgttttcagctcatttccataaactcttca |
37575981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42461322 - 42461281
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
42461322 |
atgacgtgttcataagttgatttcagcttattttcataagct |
42461281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46019628 - 46019673
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttc |
46 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| | |||||||||||| |
|
|
| T |
46019628 |
atgacatgttgataagttgttttcaacttatattcataagctcttc |
46019673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46201419 - 46201386
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttc |
34 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |
|
|
| T |
46201419 |
atgacatgttcataggttgttttcagcttatttc |
46201386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50569328 - 50569389
Alignment:
| Q |
1 |
atgacatgttcataagtt-gttttcagcttatttccataagctcttcagaattttatgaaaa |
61 |
Q |
| |
|
||||||| |||||||||| |||||||||||||| ||||||||| ||| |||| |||||||| |
|
|
| T |
50569328 |
atgacattttcataagtttgttttcagcttattgtcataagctcctcataattatatgaaaa |
50569389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17223035 - 17223071
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccat |
37 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
17223035 |
atgacatgttcataagctgttttcaacttatttccat |
17223071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19304997 - 19304961
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccat |
37 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
19304997 |
atgacatgtccataagttgttttcagcttgtttccat |
19304961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 30631534 - 30631502
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttcca |
36 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
30631534 |
acatgttcataagttgtgttcagcttatttcca |
30631502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 35064923 - 35064883
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||| |||| |
|
|
| T |
35064923 |
acatgtttataaattgttttcagcttatttccataaactct |
35064883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46401335 - 46401303
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
46401335 |
atgacatgttcataagttgtattcagcttattt |
46401303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 55084483 - 55084523
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||| || ||||||||||||| |||||||||| |
|
|
| T |
55084483 |
acatgttcataagctggtttcagcttattttcataagctct |
55084523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 44)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41809244 - 41809285
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41809244 |
atgacatgttcataagttgtttttagcttatttccataagct |
41809285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1647307 - 1647264
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1647307 |
atgacatgctcataagctgttttcagcttatttccataagctct |
1647264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16867810 - 16867767
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16867810 |
atgacatattcataagttgttttcaacttatttccataagctct |
16867767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28677658 - 28677701
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28677658 |
atgacattttcataagttgttttcggcttatttccataagctct |
28677701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29316774 - 29316813
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29316774 |
atgacatgttcataagttcttttcagcttatttccataag |
29316813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35379015 - 35379058
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
35379015 |
atgacttgttcataagttgttttcagcttattttcataagctct |
35379058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41817239 - 41817196
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
41817239 |
atgacatgttgataatttgttttcagcttatttccataagctct |
41817196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7871714 - 7871668
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||| ||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7871714 |
atgatatgatcataaggtgttttcagcttatttccataagctcttca |
7871668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 8820292 - 8820334
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
8820292 |
tgacatgttcacaagctgttttcagcttatttccataagctct |
8820334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40158789 - 40158739
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||||| ||||||||||||||||||| || |||||||||| |||||| |
|
|
| T |
40158789 |
atgacatgtttataagttgttttcagcttaattacataagctctccagaat |
40158739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 42817379 - 42817425
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||| ||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
42817379 |
catgttcttaagttgtttttagcttacttccataagctcttcagaat |
42817425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1056128 - 1056171
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| |||||||||| |
|
|
| T |
1056128 |
atgacatgttcattagttgttttcagcttgttttcataagctct |
1056171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1160670 - 1160717
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
||||||||| ||||||||||||| || ||||||||||||||| ||||| |
|
|
| T |
1160670 |
atgacatgtccataagttgtttttagtttatttccataagctgttcag |
1160717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1939331 - 1939374
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
1939331 |
atgacatgtccataagctgttttcaacttatttccataagctct |
1939374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5781740 - 5781697
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
5781740 |
atgacatgtgcataaactgttttcagcttatttccataagctct |
5781697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10198479 - 10198522
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
10198479 |
atgacatgttcataagctgttgtcagcttatttccataatctct |
10198522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 11063252 - 11063217
Alignment:
| Q |
13 |
taagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11063252 |
taagctgttttcagcttatttccataagctcttcag |
11063217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31739971 - 31740014
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||| ||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
31739971 |
atgacatgatcataagctgttttcagattatttccataagctct |
31740014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34652035 - 34652078
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
34652035 |
atgacatgtccataagctgttttcaacttatttccataagctct |
34652078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35485988 - 35485941
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||||| ||||||||| |
|
|
| T |
35485988 |
atgatatgttcataagctgttttcagctcatttccataggctcttcag |
35485941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38388758 - 38388707
Alignment:
| Q |
1 |
atgacatgttcataagttgtttt-cagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||| |||||||||| |
|
|
| T |
38388758 |
atgacatgttcataaactgtttttcagcttatttccataagttcttcagaat |
38388707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43065449 - 43065492
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
43065449 |
atgacatgtccataaattgttttcagcttatttcaataagctct |
43065492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43910998 - 43911029
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatt |
32 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
43910998 |
atgacatgttcataagttgttttcagcttatt |
43911029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44443392 - 44443349
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
44443392 |
atgaaatgttcataagttgttttcagcttattttcatatgctct |
44443349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10567128 - 10567078
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||| || ||||||| |||||| |
|
|
| T |
10567128 |
atgacatgatcataagttgttttcagctaattttcacaagctctccagaat |
10567078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12147528 - 12147478
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
||||||||||||||| |||||||||| |||||| |||||||| | |||||| |
|
|
| T |
12147528 |
atgacatgttcataaattgttttcagtttattttcataagctatccagaat |
12147478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 19333325 - 19333367
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
19333325 |
tgacatgttcataagctgttctcagcttattttcataagctct |
19333367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28039331 - 28039369
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
28039331 |
atgacttgttcataagctgttttcagcttatttccataa |
28039369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 1160741 - 1160782
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
1160741 |
gacatgtctataagttgttttcagtttatttccataagctct |
1160782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 7928304 - 7928337
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
7928304 |
tgttcataagttgttttcagcttattttcataag |
7928337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11063559 - 11063518
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||| |||||||| |
|
|
| T |
11063559 |
atgacatgtccataagttgtttttagcttattttcataagct |
11063518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16551839 - 16551880
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||| | |||||||||| ||||||||||||||||||||| |
|
|
| T |
16551839 |
atgacatatacataagttgtattcagcttatttccataagct |
16551880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 25796209 - 25796242
Alignment:
| Q |
11 |
cataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
25796209 |
cataagttgttttcagcttatttcaataagctct |
25796242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35378531 - 35378572
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||| |||||||||||| |||||||||||||| |||||||| |
|
|
| T |
35378531 |
atgacttgttcataagttattttcagcttattttcataagct |
35378572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 42420064 - 42420027
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
42420064 |
catgttcataaattgttttcagctcatttccataagct |
42420027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 3235385 - 3235421
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
3235385 |
gacaggttcataagctgttttcagcttatttccataa |
3235421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 9395195 - 9395151
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||| ||||| |||||||||||||||| |||||||||| |||||| |
|
|
| T |
9395195 |
tgtttataagctgttttcagcttattttcataagctctacagaat |
9395151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14666619 - 14666579
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagc |
41 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
14666619 |
atgacatgttcataggttgttttcaccttattttcataagc |
14666579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 18840856 - 18840824
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
18840856 |
ataagttgttttcatcttatttccataagctct |
18840824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 22681187 - 22681223
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
22681187 |
acatgttcataagctgtttttagcttatttccataag |
22681223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 29628748 - 29628780
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
29628748 |
tgttcataaattgttttcagcttatttccataa |
29628780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30538172 - 30538204
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
30538172 |
atgacatgtccataagttgttttcagcttattt |
30538204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41032965 - 41032997
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
41032965 |
ataagttgttttcagcttatttccataaactct |
41032997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 43717137 - 43717177
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagctc |
43 |
Q |
| |
|
||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
43717137 |
gacattttcataggttgttttcagcttattttcataagctc |
43717177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 37)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 20553172 - 20553132
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataagctc |
43 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20553172 |
gacatgttcataagttgttttcagattatttccataagctc |
20553132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4966227 - 4966180
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcag |
48 |
Q |
| |
|
|||| |||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4966227 |
atgatatgtccataagttgttttcagtttatttccataagctcttcag |
4966180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7244751 - 7244708
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
7244751 |
atgacatgctcataagttgttttcagcttattttcataagctct |
7244708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9423593 - 9423636
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
9423593 |
atgacatgttcataagttgttttcagcttatttcaagaagctct |
9423636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35267433 - 35267390
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
35267433 |
atgacatgttcataggttgttttcagcttatttctataagctct |
35267390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 24363601 - 24363643
Alignment:
| Q |
2 |
tgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
24363601 |
tgacatgtccataagttgttttcagcttatttccataacctct |
24363643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 26935564 - 26935606
Alignment:
| Q |
9 |
ttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
26935564 |
ttcataagctgttttcagcttatttccataagctctttagaat |
26935606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29286862 - 29286816
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||||| |||| |
|
|
| T |
29286862 |
atgacatgttcatcagttgttttcagcttatttacataagcttttca |
29286816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44151479 - 44151525
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
44151479 |
atgacatgtccataagatgttttcagcttatttccataagcttttca |
44151525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45859526 - 45859571
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
45859526 |
atgacatgttcata-gttgttttcagcttatttctataagctcttca |
45859571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46082107 - 46082057
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
46082107 |
atgacatgaccataagttgttttcagcttattttcataagctctccagaat |
46082057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12234888 - 12234931
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
12234888 |
atgacatgtctataagctgttttcagcttatttccataagctct |
12234931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 20888397 - 20888428
Alignment:
| Q |
5 |
catgttcataagttgttttcagcttatttcca |
36 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
20888397 |
catgttcataagttgttttcagcttatttcca |
20888428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22551404 - 22551447
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
22551404 |
atgacatgttcaaatgttgttttcagcttatttacataagctct |
22551447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27496406 - 27496449
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| |||| |
|
|
| T |
27496406 |
atgacatgtccataagctgttttcagcttatttccataaactct |
27496449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27503064 - 27503107
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| |||| |
|
|
| T |
27503064 |
atgacatgtccataagctgttttcagcttatttccataaactct |
27503107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39345542 - 39345503
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
39345542 |
atgacatgtccataagttgctttcagcttatttccataag |
39345503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 2825235 - 2825269
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2825235 |
atgttcataagttattttcagcttatttccataag |
2825269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33894698 - 33894660
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
33894698 |
atgacatgtccataagttgttttcagcttatttcaataa |
33894660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39334264 - 39334222
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctc |
43 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
39334264 |
atgacatgtccataagttgcattcagcttatttccataagctc |
39334222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 12792709 - 12792742
Alignment:
| Q |
18 |
tgttttcagcttatttccataagctcttcagaat |
51 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |
|
|
| T |
12792709 |
tgttttcagcttatttccgtaagctcttcagaat |
12792742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 18749818 - 18749855
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18749818 |
gacatgttcataagcagttttcagcttatttccataag |
18749855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25511697 - 25511656
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
25511697 |
atgacatgttcataaattgtcttcaacttatttccataagct |
25511656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 28165156 - 28165119
Alignment:
| Q |
7 |
tgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
28165156 |
tgttcataagctgttttcaacttatttccataagctct |
28165119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 35007665 - 35007636
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
35007665 |
acatgttcataagttgttttcagcttattt |
35007636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36598355 - 36598388
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttc |
34 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
36598355 |
atgacatgttcataagctgttttcagcttatttc |
36598388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39551547 - 39551588
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
||||||||| |||||| |||| |||||||||||||||||||| |
|
|
| T |
39551547 |
atgacatgtccataaggtgttgtcagcttatttccataagct |
39551588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 44777117 - 44777146
Alignment:
| Q |
81 |
cttatcatgataaacacttatgctataagc |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
44777117 |
cttatcatgataaacacttatgctataagc |
44777146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47134756 - 47134797
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagct |
42 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
47134756 |
atgacacgtccataagttgttttcagcttattttcataagct |
47134797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21247997 - 21247965
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
21247997 |
atgacatgttcataagttgttttaagcttattt |
21247965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 27378836 - 27378891
Alignment:
| Q |
10 |
tcataagttgttttcagcttatttccataagctcttcagaat--tttatgaaaaca |
63 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||| ||| || |||||||||||| |
|
|
| T |
27378836 |
tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaaca |
27378891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33645960 - 33646008
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctcttcaga |
49 |
Q |
| |
|
||||||||| |||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
33645960 |
atgacatgtctataagttgtttttaggttatttccataagctctccaga |
33646008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33871320 - 33871288
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttattt |
33 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
33871320 |
atgacatgttcataagttgttttgagcttattt |
33871288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 34754820 - 34754852
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
34754820 |
ataagttgttttcagcttatttccatcagctct |
34754852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 38010782 - 38010746
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataag |
40 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
38010782 |
acatgttcataagctgtttttagcttatttccataag |
38010746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 39281035 - 39281003
Alignment:
| Q |
6 |
atgttcataagttgttttcagcttatttccata |
38 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
39281035 |
atgtccataagttgttttcagcttatttccata |
39281003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47395100 - 47395140
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||| ||||| |
|
|
| T |
47395100 |
acatgtttataagttgttttcaacttatttccataggctct |
47395140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0089 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0089
Description:
Target: scaffold0089; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 33637 - 33672
Alignment:
| Q |
12 |
ataagttgttttcagcttatttccataagctcttca |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
33637 |
ataagttgttttcagcttatttccataagctcttca |
33672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0311 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0311
Description:
Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10616 - 10654
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10616 |
atgacatgtccataagttgttttcagcttatttccataa |
10654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0147
Description:
Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 4937 - 4977
Alignment:
| Q |
4 |
acatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4937 |
acatgttcataagttgttttcagcttaactccataagctct |
4977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0147; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12703 - 12746
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
12703 |
atgacatgtccataagttgttttcagcttagctccataagctct |
12746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3544 - 3501
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
3544 |
atgatatgtccataagttgttttcagcttatttccataatctct |
3501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0159 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0159
Description:
Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27072 - 27029
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
27072 |
atgacatgtgcataaactgttttcagcttatttccataagctct |
27029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0153 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0153
Description:
Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6493 - 6536
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
6493 |
atgacatgtctataagttgttttcagtttatttccataagctct |
6536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13513 - 13556
Alignment:
| Q |
1 |
atgacatgttcataagttgttttcagcttatttccataagctct |
44 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
13513 |
atgacatgtctataagttgttttcagtttatttccataagctct |
13556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 16179 - 16143
Alignment:
| Q |
3 |
gacatgttcataagttgttttcagcttatttccataa |
39 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
16179 |
gacatgtccataagttgttttcaacttatttccataa |
16143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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