View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5413_high_62 (Length: 244)
Name: NF5413_high_62
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5413_high_62 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 41 - 234
Target Start/End: Complemental strand, 36636470 - 36636276
Alignment:
| Q |
41 |
atatcaaatgttccggtcgtctaaattatacttaag-aactatgtgttgttaccttactaacatgttctatcctaagctttaatatcaatagaatgtaag |
139 |
Q |
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| T |
36636470 |
atatcaaatgtttcggtcgtctaaattatagttagggaactatgtgttgttaccttactaacatgttctatcctaagctttaatatcaatagaatgtaag |
36636371 |
T |
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| Q |
140 |
aatttcaatatcaagtgggatagtatatacttacttgagaacaaattgtgttccacacttcctctggccatgtactcatatattagcaccctatg |
234 |
Q |
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| T |
36636370 |
aatttcaatatcaagtgggatagtatatacttacttgagaacaaattgtgttccacacttcctctggccatgtactcatatattagcaccctatg |
36636276 |
T |
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