View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5413_high_81 (Length: 211)

Name: NF5413_high_81
Description: NF5413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5413_high_81
NF5413_high_81
[»] chr3 (26 HSPs)
chr3 (1-196)||(47867087-47867282)
chr3 (1-58)||(37074853-37074910)
chr3 (5-43)||(23910640-23910678)
chr3 (1-43)||(31836862-31836904)
chr3 (1-46)||(7866655-7866700)
chr3 (5-46)||(11054453-11054494)
chr3 (5-46)||(14752384-14752425)
chr3 (5-58)||(22479211-22479264)
chr3 (6-58)||(3972161-3972213)
chr3 (6-58)||(3997665-3997717)
chr3 (9-85)||(37042566-37042644)
chr3 (94-145)||(47866749-47866800)
chr3 (1-43)||(8764833-8764875)
chr3 (1-43)||(9263916-9263958)
chr3 (8-46)||(36546480-36546518)
chr3 (8-46)||(36561797-36561835)
chr3 (1-43)||(50730016-50730058)
chr3 (1-43)||(50782794-50782836)
chr3 (1-42)||(6074993-6075034)
chr3 (1-46)||(6752574-6752619)
chr3 (1-46)||(8769734-8769778)
chr3 (5-46)||(23311738-23311779)
chr3 (1-58)||(51260172-51260228)
chr3 (5-46)||(54465067-54465108)
chr3 (6-46)||(1335030-1335070)
chr3 (1-37)||(51311587-51311623)
[»] chr8 (21 HSPs)
chr8 (1-58)||(374204-374261)
chr8 (1-86)||(29920485-29920570)
chr8 (1-46)||(30576041-30576086)
chr8 (1-84)||(41755787-41755870)
chr8 (1-84)||(35344248-35344333)
chr8 (1-46)||(4047108-4047153)
chr8 (5-46)||(7022590-7022631)
chr8 (5-46)||(7858460-7858501)
chr8 (1-46)||(13144175-13144220)
chr8 (1-46)||(24892739-24892784)
chr8 (5-46)||(34890392-34890433)
chr8 (1-46)||(35525499-35525544)
chr8 (1-46)||(36190672-36190717)
chr8 (2-46)||(13143665-13143709)
chr8 (5-46)||(8107836-8107878)
chr8 (8-46)||(15958105-15958143)
chr8 (1-46)||(16879612-16879657)
chr8 (1-46)||(28348513-28348557)
chr8 (1-46)||(36537980-36538025)
chr8 (2-58)||(8711765-8711821)
chr8 (1-70)||(33563724-33563795)
[»] chr1 (24 HSPs)
chr1 (1-70)||(298880-298949)
chr1 (1-85)||(28016957-28017043)
chr1 (13-84)||(2246238-2246311)
chr1 (1-46)||(4672802-4672847)
chr1 (1-46)||(7468166-7468211)
chr1 (5-46)||(15959857-15959898)
chr1 (3-46)||(6786740-6786783)
chr1 (1-46)||(6787204-6787249)
chr1 (4-84)||(10558973-10559054)
chr1 (5-46)||(12449153-12449194)
chr1 (5-46)||(32624192-32624233)
chr1 (5-46)||(39555772-39555813)
chr1 (1-46)||(44149045-44149090)
chr1 (1-41)||(3875236-3875276)
chr1 (1-84)||(25990628-25990712)
chr1 (1-87)||(37735603-37735690)
chr1 (5-39)||(32983356-32983390)
chr1 (13-43)||(39932799-39932829)
chr1 (1-84)||(40219936-40220021)
chr1 (1-46)||(6785359-6785404)
chr1 (5-46)||(43667486-43667527)
chr1 (1-58)||(47026385-47026442)
chr1 (1-46)||(47600253-47600298)
chr1 (6-46)||(15285723-15285763)
[»] scaffold0132 (2 HSPs)
scaffold0132 (1-58)||(903-960)
scaffold0132 (1-58)||(8863-8920)
[»] chr2 (24 HSPs)
chr2 (1-46)||(5280693-5280738)
chr2 (13-73)||(35022771-35022832)
chr2 (3-69)||(24204732-24204799)
chr2 (1-46)||(33198847-33198892)
chr2 (1-46)||(40808925-40808970)
chr2 (1-85)||(35832290-35832376)
chr2 (1-84)||(33635215-33635300)
chr2 (5-46)||(6110386-6110427)
chr2 (5-46)||(19264002-19264043)
chr2 (1-46)||(45660265-45660310)
chr2 (1-40)||(9864930-9864969)
chr2 (5-43)||(41528193-41528231)
chr2 (2-46)||(14873863-14873908)
chr2 (1-46)||(25571947-25571992)
chr2 (5-46)||(28599334-28599375)
chr2 (1-46)||(28858212-28858257)
chr2 (1-46)||(29524253-29524298)
chr2 (1-58)||(30752036-30752093)
chr2 (1-46)||(35116009-35116054)
chr2 (5-46)||(38070918-38070959)
chr2 (5-46)||(45085191-45085232)
chr2 (6-58)||(15068653-15068705)
chr2 (6-46)||(18454968-18455008)
chr2 (1-84)||(28424154-28424238)
[»] chr7 (25 HSPs)
chr7 (1-90)||(4237923-4238013)
chr7 (5-58)||(25944467-25944520)
chr7 (1-46)||(47778675-47778720)
chr7 (1-84)||(36576296-36576381)
chr7 (5-46)||(16562682-16562723)
chr7 (5-46)||(16602939-16602980)
chr7 (5-46)||(18102463-18102504)
chr7 (1-84)||(31280611-31280696)
chr7 (6-46)||(30082282-30082322)
chr7 (6-46)||(47557933-47557973)
chr7 (1-84)||(15995580-15995662)
chr7 (1-85)||(19933206-19933292)
chr7 (1-85)||(19964345-19964431)
chr7 (1-84)||(3157314-3157399)
chr7 (5-43)||(44682778-44682816)
chr7 (1-84)||(45598782-45598867)
chr7 (5-46)||(14805804-14805845)
chr7 (5-46)||(15252798-15252839)
chr7 (13-46)||(31550103-31550136)
chr7 (13-77)||(34751761-34751826)
chr7 (1-46)||(41890411-41890456)
chr7 (5-46)||(45485887-45485928)
chr7 (6-46)||(18800919-18800959)
chr7 (1-41)||(27810941-27810981)
chr7 (6-46)||(46760444-46760484)
[»] chr4 (26 HSPs)
chr4 (1-84)||(12002841-12002926)
chr4 (1-46)||(17186988-17187033)
chr4 (1-58)||(19351728-19351785)
chr4 (1-51)||(4058610-4058660)
chr4 (1-84)||(50768321-50768406)
chr4 (5-46)||(2229179-2229220)
chr4 (5-46)||(14332691-14332732)
chr4 (1-46)||(16605041-16605086)
chr4 (5-46)||(28669179-28669220)
chr4 (1-46)||(35529572-35529617)
chr4 (1-46)||(39078058-39078103)
chr4 (13-58)||(50080678-50080723)
chr4 (6-46)||(42915430-42915470)
chr4 (7-46)||(55580568-55580607)
chr4 (5-43)||(5483488-5483526)
chr4 (1-43)||(10069600-10069642)
chr4 (1-59)||(21181122-21181180)
chr4 (1-43)||(30245038-30245080)
chr4 (1-84)||(39970148-39970233)
chr4 (1-58)||(24940274-24940330)
chr4 (6-84)||(29180576-29180656)
chr4 (1-46)||(32012486-32012531)
chr4 (5-46)||(41414788-41414829)
chr4 (1-58)||(47806802-47806859)
chr4 (5-46)||(47867811-47867852)
chr4 (1-46)||(48793832-48793877)
[»] chr5 (18 HSPs)
chr5 (5-58)||(8225354-8225407)
chr5 (1-46)||(42273552-42273597)
chr5 (6-58)||(39505450-39505502)
chr5 (1-46)||(17351283-17351329)
chr5 (5-46)||(9957633-9957674)
chr5 (1-46)||(12730200-12730245)
chr5 (1-46)||(32433576-32433621)
chr5 (4-46)||(34425233-34425275)
chr5 (1-46)||(104433-104478)
chr5 (5-46)||(842752-842793)
chr5 (5-58)||(7071129-7071182)
chr5 (5-46)||(11262070-11262111)
chr5 (1-46)||(12793020-12793065)
chr5 (5-46)||(20643917-20643958)
chr5 (1-46)||(25840766-25840811)
chr5 (5-46)||(37522776-37522817)
chr5 (5-46)||(37562948-37562989)
chr5 (1-46)||(38130329-38130374)
[»] scaffold0045 (1 HSPs)
scaffold0045 (5-46)||(77891-77932)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-46)||(157697-157742)
[»] chr6 (6 HSPs)
chr6 (1-58)||(2851468-2851525)
chr6 (5-46)||(3095907-3095948)
chr6 (5-46)||(21542352-21542393)
chr6 (13-69)||(12461607-12461663)
chr6 (1-84)||(10227791-10227876)
chr6 (5-46)||(35129241-35129282)
[»] scaffold0774 (1 HSPs)
scaffold0774 (5-47)||(3614-3656)
[»] scaffold0495 (1 HSPs)
scaffold0495 (1-84)||(4510-4595)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 47867087 - 47867282
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaattttttccttacattttagaatggagggagtacataaatttgagatga 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |||  |||||||| ||||||||||||    
T  47867087 ataggataaaaatttgtcttttttacttacattttgggataaagaaggtgaatttttttcttacattttagaacggacagagtacatgaatttgagatga 47867186  T
Q  101 ttttgatgagtttccatgaaaatgaattaataatacaaatggattaaagaaatacataatattgagatgattttgatgagtttcaatagttatatg 196  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47867187 ttttgatgagtttccataaaaatgaattaataatacaaatggattaaagaaatacataatcttgagatgattttgatgagtttcaatagttatatg 47867282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37074910 - 37074853
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||  ||||||||||    
T  37074910 ataggataaaagtttgtcttttttgcttatatttcgggacaaagaaaatgaatttttt 37074853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23910640 - 23910678
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  23910640 gataaaaatttgtcttttttgcttatattttgggacaaa 23910678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31836904 - 31836862
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  31836904 ataggataaaagtttgtattttttgcttacattttgggacaaa 31836862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7866655 - 7866700
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  7866655 ataggataaaagtttgtcttttttgtttatattttgggacaaagaa 7866700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 11054453 - 11054494
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  11054453 gataaaagtttgtcttttttgcttatattttgggacaaagaa 11054494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 14752384 - 14752425
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  14752384 gataaaagtttgtcttttttgcttatattttgggacaaagaa 14752425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 22479211 - 22479264
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||| ||||||||||||||||| | ||||||||||||||  ||||||||||    
T  22479211 gataaaagtttgtcttttttgcttataatttgggacaaagaaaatgaatttttt 22479264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 3972213 - 3972161
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||| ||| |||||||||||||||||||||||||||||  |||| ||||||    
T  3972213 ataaaagtttatcttttttgcttacattttgggacaaagatagtgattttttt 3972161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 3997665 - 3997717
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||| ||| |||||||||||||||||||||||||||||  |||| ||||||    
T  3997665 ataaaagtttatcttttttgcttacattttgggacaaagatagtgattttttt 3997717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 37042566 - 37042644
Alignment:
Q  9 aaaatttgtcttttttgcttacattttgggacaaagaaggtgaatt--ttttccttacattttagaatggagggagtac 85  Q
    |||||||||||||||| |||| ||||||||||||||||  ||||||  |||| |||| ||| | ||| |||||||||||    
T  37042566 aaaatttgtcttttttccttatattttgggacaaagaaaatgaatttcttttgcttatattatggaacggagggagtac 37042644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 47866749 - 47866800
Alignment:
Q  94 gagatgattttgatgagtttccatgaaaatgaattaataatacaaatggatt 145  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||| |||||||    
T  47866749 gagatgattttgatgactttcggtgaaaatgaattaataacacagatggatt 47866800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8764833 - 8764875
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||    
T  8764833 ataggataaaagtttgtcttttttgcttaaattttgcgacaaa 8764875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9263958 - 9263916
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||||||| | ||||||||||| |||||||||||||    
T  9263958 ataggataaaaatttattttttttgcttatattttgggacaaa 9263916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 36546518 - 36546480
Alignment:
Q  8 aaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  36546518 aaaagtttgtcttttttgcttatattttgggacaaagaa 36546480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 36561797 - 36561835
Alignment:
Q  8 aaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  36561797 aaaagtttgtcttttttgcttatattttgggacaaagaa 36561835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 50730058 - 50730016
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  50730058 ataggataaaaatttatcttttttacttatattttgggacaaa 50730016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50782794 - 50782836
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  50782794 ataggataaaaatttatcttttttacttatattttgggacaaa 50782836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6075034 - 6074993
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaa 42  Q
    ||||||||||  ||||||||||||||||| ||||||||||||    
T  6075034 ataggataaatgtttgtcttttttgcttatattttgggacaa 6074993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6752619 - 6752574
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| |||| ||||| ||||||||||    
T  6752619 ataggataaaagtttgtcttttttacttaaattttaggacaaagaa 6752574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8769734 - 8769778
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||    
T  8769734 ataggataaaagtttgtctttttt-cttacattttgcgacaaagaa 8769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 23311738 - 23311779
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| |||| |||||||||||| ||||||||||||||||    
T  23311738 gataaaagtttgacttttttgcttatattttgggacaaagaa 23311779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51260172 - 51260228
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||||||||||| ||||| ||||||| || ||| |||||| |||||||||||    
T  51260172 ataggataaaaatttgtc-tttttacttacatattaggataaagaaagtgaatttttt 51260228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 54465067 - 54465108
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||    
T  54465067 gataaaaatttatcttttttgcttatattttaggacaaagaa 54465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 1335070 - 1335030
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||| |||||||||||||| |||||| |||||||||    
T  1335070 ataaaaattggtcttttttgcttatattttgagacaaagaa 1335030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51311623 - 51311587
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgg 37  Q
    |||||||||||||||||||||||| |||| |||||||    
T  51311623 ataggataaaaatttgtcttttttacttatattttgg 51311587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 8e-20; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 374204 - 374261
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  374204 ataggataaacatttgtcttttttgcttacattttgggagaaagaaggtgaatttttt 374261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29920485 - 29920570
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaattttttccttacattttagaatggagggagtaca 86  Q
    ||||||||||| ||||| ||||||||||| |||| |||||||||||  |||||||||| |||||||||| ||| || |||||||||    
T  29920485 ataggataaaagtttgtgttttttgcttatatttagggacaaagaaaatgaattttttgcttacattttggaacggtgggagtaca 29920570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30576041 - 30576086
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  30576041 ataggataaaaatttgtcttttttgcttatattttgggacaaagaa 30576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41755870 - 41755787
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaattttttccttacattttagaatggagggagta 84  Q
    |||||||||||||||| |||||||||| | ||||| ||| ||||||  ||  ||||||||||||||||||| | | ||||||||    
T  41755870 ataggataaaaatttgccttttttgctcatattttaggataaagaaattgtgttttttccttacattttaggacgaagggagta 41755787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 35344333 - 35344248
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| ||||||||| |||||||||||||| |||||| ||||||||  | | ||| ||||| |||| ||||||| ||||||||||||    
T  35344333 atagcataaaaattggtcttttttgcttatattttgagacaaagaatatgagaaatttttgcttatattttaggatggagggagta 35344248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4047108 - 4047153
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  4047108 atagaataaaagtttgtcttttttgcttatattttgggacaaagaa 4047153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 7022590 - 7022631
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  7022590 gataaaagtttgtcttttttgcttatattttgggacaaagaa 7022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 7858501 - 7858460
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  7858501 gataaaagtttgtcttttttgcttatattttgggacaaagaa 7858460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13144175 - 13144220
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||    
T  13144175 ataggataaaagtttgtcttttttgcttatattttgagacaaagaa 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24892784 - 24892739
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  24892784 ataggataaaagtttgtcttttttgcttatattttggaacaaagaa 24892739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 34890392 - 34890433
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  34890392 gataaaagtttgtcttttttgcttatattttgggacaaagaa 34890433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35525544 - 35525499
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  35525544 ataggataaaagtttgtcttttttacttatattttgggacaaagaa 35525499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36190717 - 36190672
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||    
T  36190717 ataggataaaagtgtgtcttttttgcttatattttgggacaaagaa 36190672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 13143709 - 13143665
Alignment:
Q  2 taggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||    
T  13143709 taggataaaagtttatcttttttgcttatattttgggacaaagaa 13143665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 8107836 - 8107878
Alignment:
Q  5 gataaaaatttgtctttt-ttgcttacattttgggacaaagaa 46  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  8107836 gataaaaatttgtctttttttgcttatattttgggacaaagaa 8107878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 15958105 - 15958143
Alignment:
Q  8 aaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  15958105 aaaaatttgtattttttgcttatattttgggacaaagaa 15958143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16879612 - 16879657
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  16879612 ataggataaaaatttgtcttctttacttccattttgagacaaagaa 16879657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28348557 - 28348513
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  28348557 ataggataaaagtttgtctttttt-cttatattttgggacaaagaa 28348513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36538025 - 36537980
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| |||||| |||||||||    
T  36538025 atagcataaaagtttgtcttttttgcttatattttgagacaaagaa 36537980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8711821 - 8711765
Alignment:
Q  2 taggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||||||||||||||||  ||| |||||| |||||| ||  ||||||||||    
T  8711821 taggataaaaatttgtcttttttatttatattttgagacaaataaaatgaatttttt 8711765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33563724 - 33563795
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggt--gaattttttccttacatttta 70  Q
    ||||||||||| ||| || |||||||||| | |||||||||||||| ||  | |||||||||||| ||||||    
T  33563724 ataggataaaagtttatcatttttgcttataatttgggacaaagaaagtaagtattttttccttatatttta 33563795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 298880 - 298949
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaattttttccttacatttta 70  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||  ||| |||||| |||||||||||    
T  298880 ataggataaaactttgtcttttttgcttacattttgagacaaagaaaatgagtttttttcttacatttta 298949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28016957 - 28017043
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtga--attttttccttacattttagaatggagggagtac 85  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  |||  ||||||| |||| ||| | ||| |||||||||||    
T  28016957 ataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaggattttttgcttagattatggaacggagggagtac 28017043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2246238 - 2246311
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaagaaggtga--attttttccttacattttagaatggagggagta 84  Q
    ||||||||||||||||||||||||||| ||| ||  |||   ||||||||||||||||||||| ||||||||||    
T  2246238 tttgtcttttttgcttacattttgggataaaaaaattgagttttttttccttacattttagaacggagggagta 2246311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4672847 - 4672802
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4672847 ataggataaaaatttatcttttttgcttatattttgggacaaagaa 4672802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7468166 - 7468211
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  7468166 ataggataaaagtttgtcttttttgcttatattttgggacaaagaa 7468211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 15959857 - 15959898
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  15959857 gataaaaatttgtcttttttgcttatattttgggacaaagaa 15959898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 6786783 - 6786740
Alignment:
Q  3 aggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  6786783 aggataaaagtttgtcttttttgcttatattttgggacaaagaa 6786740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6787204 - 6787249
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  6787204 ataggataaaagtttgtcttttttgcttatattttgggataaagaa 6787249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 10558973 - 10559054
Alignment:
Q  4 ggataaaaatttgtcttttttgcttacattttgggacaaagaaggtga-attttttccttacattttagaatggagggagta 84  Q
    ||||||||||||||||||||||||||||||||  |||||| ||  |||  |||||| |||||||||| ||| ||| ||||||    
T  10558973 ggataaaaatttgtcttttttgcttacattttaagacaaataaattgagtttttttgcttacattttggaacggaaggagta 10559054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 12449153 - 12449194
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  12449153 gataaaagtttgtcttttttgcttatattttgggacaaagaa 12449194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 32624192 - 32624233
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  32624192 gataaaagtttgtcttttttgcttatattttgggacaaagaa 32624233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 39555772 - 39555813
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  39555772 gataaaagtttgtcttttttgcttatattttgggacaaagaa 39555813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44149045 - 44149090
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  44149045 atagaataaaagtttgtcttttttgcttatattttgggacaaagaa 44149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3875236 - 3875276
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggaca 41  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  3875236 ataggataaaaatttgtcttttttgcttatattatgggaca 3875276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25990712 - 25990628
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtga-attttttccttacattttagaatggagggagta 84  Q
    |||| ||||||||| |||||||||||||| |||||| |||||||||  |||  |||||| |||| ||||||| | ||||||||||    
T  25990712 atagcataaaaattggtcttttttgcttatattttgagacaaagaatatgagtttttttgcttatattttaggacggagggagta 25990628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37735603 - 37735690
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtga-attttttccttacattttagaatggagggagtacat 87  Q
    |||||||| || ||| ||||||||||||||| ||||||||| ||||  | |  ||||||||||||||||| | | |||||||||||||    
T  37735603 ataggatacaagtttatcttttttgcttacagtttgggacagagaaaataagtttttttccttacattttgggacggagggagtacat 37735690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 32983356 - 32983390
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttggga 39  Q
    ||||||||||||||||||||||||| |||||||||    
T  32983356 gataaaaatttgtcttttttgcttatattttggga 32983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 39932799 - 39932829
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaa 43  Q
    |||||||||||||||||||||||||||||||    
T  39932799 tttgtcttttttgcttacattttgggacaaa 39932829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 40220021 - 40219936
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| ||||||||| |||||||||||||| |||||| ||||||||  | | || |||||| |||| ||||||| | ||||||||||    
T  40220021 atagcataaaaattagtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 40219936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6785404 - 6785359
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||| ||||||||||||| |||||| |||||||||    
T  6785404 ataggataaaagtttatcttttttgcttatattttgtgacaaagaa 6785359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 43667486 - 43667527
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| |||||| |||||||||    
T  43667486 gataaaagtttgtcttttttgcttatattttgagacaaagaa 43667527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47026442 - 47026385
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||||||| |||||||||||| |||| ||||| | ||||||||  ||||||||||    
T  47026442 ataggataaaagtttgtcttttttacttatattttagaacaaagaaaatgaatttttt 47026385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47600253 - 47600298
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||||||||||||||||| |||| | ||| ||||||||||    
T  47600253 ataggataaaaatttgtcttttttacttatactttcggacaaagaa 47600298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 15285763 - 15285723
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||| |||||||||||||| |||||| |||||||||    
T  15285763 ataaaaattggtcttttttgcttatattttgagacaaagaa 15285723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 960 - 903
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  960 ataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaatttttt 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8920 - 8863
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  8920 ataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaatttttt 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5280693 - 5280738
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  5280693 ataggataaaaatttgtcttttttgcttatattttgggacaaagaa 5280738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 35022832 - 35022771
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaagaaggtga-attttttccttacattttagaa 73  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  35022832 tttgtcttttttgcttacattttaggacaaagaaagtgagtttttttccttacattttagaa 35022771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 24204732 - 24204799
Alignment:
Q  3 aggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa-ttttttccttacatttt 69  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||  |||| |||||||||||||||||    
T  24204732 aggatacaaatttgtctttttcgcttacattttggaacaaagaaaatgaatttttttccttacatttt 24204799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33198847 - 33198892
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  33198847 ataggataaaattttgtcttttttgcttatattttgggacaaagaa 33198892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40808925 - 40808970
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  40808925 atagaataaaaatttgtcttttttgcttatattttgggacaaagaa 40808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35832376 - 35832290
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa--ttttttccttacattttagaatggagggagtac 85  Q
    |||| |||||||| ||||||||||||||| |||||| |||||||||  | ||  |||||| |||| ||||||||| |||||||||||    
T  35832376 atagcataaaaatatgtcttttttgcttatattttgagacaaagaatataaaatttttttgcttatattttagaacggagggagtac 35832290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33635300 - 33635215
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaag--aaggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| |||||| || |||||||||||||| |||||| |||||||  || | || |||||| |||| ||||||||||||||||||||    
T  33635300 atagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttagaatggagggagta 33635215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 6110386 - 6110427
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  6110386 gataaaagtttgtcttttttgcttatattttgggacaaagaa 6110427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 19264043 - 19264002
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  19264043 gataaaagtttgtcttttttgcttatattttgggacaaagaa 19264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45660310 - 45660265
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  45660310 ataggataaaagtttgttttttttgcttatattttgggacaaagaa 45660265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9864930 - 9864969
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggac 40  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  9864930 ataggataaaagtttgtcttttttgcttactttttgggac 9864969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 41528231 - 41528193
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  41528231 gataaaagtttgtcttttttgcttatattttgggacaaa 41528193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 14873908 - 14873863
Alignment:
Q  2 taggataaaaatttgtctttttt-gcttacattttgggacaaagaa 46  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||    
T  14873908 taggataaaaatttgtttttttttgcttatattttgggacaaagaa 14873863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25571992 - 25571947
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||    
T  25571992 atagaataaaagtttgttttttttgcttatattttgggacaaagaa 25571947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 28599334 - 28599375
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||    
T  28599334 gataaaagtttgtcttttttgattatattttgggacaaagaa 28599375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28858257 - 28858212
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||| ||||||||||| ||||| ||||||||||    
T  28858257 ataggataaaagtttgtattttttgcttatattttaggacaaagaa 28858212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29524253 - 29524298
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| |||||||||||| |||| ||||||||||||||||    
T  29524253 atagaataaaagtttgtcttttttacttatattttgggacaaagaa 29524298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30752093 - 30752036
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||||| |||||| ||||||||| | ||||||| |||||| |||| ||||||    
T  30752093 ataggataaaaacttgtctattttgcttataatttgggataaagaaagtgagtttttt 30752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35116009 - 35116054
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| |||||||||||||||| |||||||||| | ||||||||    
T  35116009 ataggattaaaatttgtctttttttcttacattttagaacaaagaa 35116054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 38070959 - 38070918
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| | ||||||||||||||    
T  38070959 gataaaagtttgtcttttttgcttataatttgggacaaagaa 38070918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 45085232 - 45085191
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  45085232 gataaaagtttatcttttttgcttatattttgggacaaagaa 45085191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 15068705 - 15068653
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||  ||||||||||||| |||||| |||||||||  ||||||||||    
T  15068705 ataaaaattgatcttttttgcttatattttgagacaaagaaaatgaatttttt 15068653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 18455008 - 18454968
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||| ||||||||||||| ||||| ||||||||||    
T  18455008 ataaaaatttatcttttttgcttatattttaggacaaagaa 18454968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28424238 - 28424154
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa-ttttttccttacattttagaatggagggagta 84  Q
    |||| |||||| || |||||||||||||| |||||| |||||||||  | || |||||| |||| ||||||| | ||||||||||    
T  28424238 atagcataaaagttggtcttttttgcttaaattttgagacaaagaatataaatttttttgcttatattttaggacggagggagta 28424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4237923 - 4238013
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa-ttttttccttacattttagaatggagggagtacataaa 90  Q
    |||||||| || |||||| ||||| |||||||||||||| ||||||  |||| |||||| |||||||||||||| ||| |||||| |||||    
T  4237923 ataggatataagtttgtcctttttacttacattttgggataaagaaactgaatttttttgcttacattttagaacggacggagtatataaa 4238013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 25944520 - 25944467
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  25944520 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaatttttt 25944467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47778720 - 47778675
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  47778720 atagaataaaaatttgtcttttttgcttatattttgggacaaagaa 47778675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36576381 - 36576296
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaag--aaggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| |||||| |||||||||||| |||| |||||| |||||||  || | || ||||||||||| ||||||| ||||||||||||    
T  36576381 atagcataaaagtttgtcttttttacttatattttgagacaaagaaaatgagatttttttccttatattttaggatggagggagta 36576296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 16562723 - 16562682
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  16562723 gataaaaatttgtcttttttacttatattttgggacaaagaa 16562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 16602939 - 16602980
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  16602939 gataaaaatttgtcttttttacttatattttgggacaaagaa 16602980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 18102504 - 18102463
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  18102504 gataaaagtttgtcttttttgcttatattttgggacaaagaa 18102463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31280611 - 31280696
Alignment:
Q  1 ataggataaaaatttgt-cttttttgcttacattttgggacaaagaaggtg-aattttttccttacattttagaatggagggagta 84  Q
    |||||||||||||||||  |||||| |||| |||||||||||||||| |||   |||||| |||||||||||||| ||||| ||||    
T  31280611 ataggataaaaatttgtatttttttacttatattttgggacaaagaaagtgtgtttttttgcttacattttagaacggaggaagta 31280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 30082322 - 30082282
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  30082322 ataaaaattggtcttttttgcttatattttgggacaaagaa 30082282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 47557933 - 47557973
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  47557933 ataaaagtttgtcttttttgcttatattttgggacaaagaa 47557973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15995662 - 15995580
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| ||||||||||||||||||| |||| || |||||||||| || ||| | ||||| |||||||||| | |||||| |||||    
T  15995662 atagaataaaaatttgtctttttttcttatatattgggacaaacaaagtg-agtttttgcttacattttgggatggagcgagta 15995580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19933206 - 19933292
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa--ttttttccttacattttagaatggagggagtac 85  Q
    |||| |||||| ||| ||||||||||||| |||||| || ||||||  ||||  |||||| |||| ||||||||| |||||||||||    
T  19933206 atagcataaaagtttatcttttttgcttatattttgagataaagaaaatgaaatttttttgcttatattttagaacggagggagtac 19933292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19964345 - 19964431
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa--ttttttccttacattttagaatggagggagtac 85  Q
    |||| |||||| ||| ||||||||||||| |||||| || ||||||  ||||  |||||| |||| ||||||||| |||||||||||    
T  19964345 atagcataaaagtttatcttttttgcttatattttgagataaagaaaatgaaatttttttgcttatattttagaacggagggagtac 19964431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3157399 - 3157314
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaa--ttttttccttacattttagaatggagggagta 84  Q
    |||| |||||| || |||||||||||||| |||||| ||||| |||  ||||  |||||| |||| ||||||||| ||||||||||    
T  3157399 atagcataaaagttagtcttttttgcttatattttgagacaaggaaaatgaaatttttttgcttatattttagaacggagggagta 3157314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 44682816 - 44682778
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  44682816 gataaaagtttgtcttttttgcttacattttggaacaaa 44682778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45598867 - 45598782
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| ||||||||| |||||||||||||| |||||| ||||||||  | | || |||||| |||| ||||||| | ||||||||||    
T  45598867 atagcataaaaattagtcttttttgcttatattttgagacaaagaacatgagatttttttgcttatattttaggacggagggagta 45598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 14805845 - 14805804
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||    
T  14805845 gataaaagtttgtctgttttgcttatattttgggacaaagaa 14805804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 15252839 - 15252798
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||    
T  15252839 gataaaagtttgtctgttttgcttatattttgggacaaagaa 15252798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 31550103 - 31550136
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||||| |||||||||||||||||||||    
T  31550103 tttgtcttttttacttacattttgggacaaagaa 31550136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 34751761 - 34751826
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaagaaggtga-attttttccttacattttagaatgga 77  Q
    ||||||||||||||| || |||| ||| |||||| ||||  ||||||||||||||||||| |||||    
T  34751761 tttgtcttttttgctgactttttaggataaagaaagtgagtttttttccttacattttaggatgga 34751826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41890411 - 41890456
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| ||||||||| |||||||||||||| |||||| |||||||||    
T  41890411 atagcataaaaattggtcttttttgcttatattttgagacaaagaa 41890456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 45485928 - 45485887
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||    
T  45485928 gataaaattttgtcttttttgcttatatttttggacaaagaa 45485887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 18800919 - 18800959
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||| | ||||||||||||||| ||||||||||||||||    
T  18800919 ataaaagtatgtcttttttgcttatattttgggacaaagaa 18800959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27810941 - 27810981
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggaca 41  Q
    |||||||||||  |||||||||||||| |||||||||||||    
T  27810941 ataggataaaagattgtcttttttgctgacattttgggaca 27810981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 46760444 - 46760484
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||| |||||||||||| |||| ||||||||||||||||    
T  46760444 ataaaagtttgtcttttttacttatattttgggacaaagaa 46760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12002841 - 12002926
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtga--attttttccttacattttagaatggagggagta 84  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||| ||||   |||||| |||||||||| | | ||||||||||    
T  12002841 atagaataaaagtttgtcttttttgcttacatttagggacaaagaaagtgagttttttttgcttacattttgggacggagggagta 12002926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17186988 - 17187033
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  17186988 ataggataaaagtttgtcttttttgcttatattttgggacaaagaa 17187033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19351785 - 19351728
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||| |||||| |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  19351785 atagaataaaagtttgtctttttttcttacattttgggataaagaaggtgagtttttt 19351728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4058660 - 4058610
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtga 51  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  4058660 ataggataaaagtttgtcttttttgcttatattttaggacaaagaaagtga 4058610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 50768406 - 50768321
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaag--aaggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| |||||| || |||||||||||||| |||||| |||||||  || | || |||||| |||| ||||||||||||||||||||    
T  50768406 atagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttagaatggagggagta 50768321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 2229220 - 2229179
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  2229220 gataaaagtttgtcttttttgcttatattttgggacaaagaa 2229179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 14332732 - 14332691
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  14332732 gataaaagtttgtcttttttgcttatattttgggacaaagaa 14332691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16605041 - 16605086
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  16605041 atagcataaaagtttgtcttttttgcttatattttgggacaaagaa 16605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 28669179 - 28669220
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  28669179 gataaaaatttgtcctttttgcttatattttgggacaaagaa 28669220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35529617 - 35529572
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  35529617 atagaataaaagtttgtcttttttgcttatattttgggacaaagaa 35529572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39078103 - 39078058
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  39078103 ataggataaaagtttgtcttttttacttatattttgggacaaagaa 39078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 50080678 - 50080723
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||    
T  50080678 tttgtcttttttgcttacattttgggataaagaaagtgagtttttt 50080723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 42915470 - 42915430
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  42915470 ataaaagtttgtcttttttgcttatattttgggacaaagaa 42915430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 55580607 - 55580568
Alignment:
Q  7 taaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  55580607 taaaagtttgtcttttttgcttatattttgggacaaagaa 55580568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 5483488 - 5483526
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  5483488 gataaaaatttgtcttttttacttacattttgagacaaa 5483526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10069642 - 10069600
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||    
T  10069642 ataggataaaagtttttcttttttgcttatattttgggacaaa 10069600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21181122 - 21181180
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaattttttc 59  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||  ||||| ||||||    
T  21181122 ataggataaaaatttgtcttttttatttataatttgggacaaagatagtgaactttttc 21181180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30245080 - 30245038
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaa 43  Q
    ||||||||||  ||||||||||||||||||||||||| |||||    
T  30245080 ataggataaacgtttgtcttttttgcttacattttggaacaaa 30245038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39970148 - 39970233
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| ||||||||| |||||||||||||| |||||| ||||||||  | | || |||||| |||| ||||||| | ||||||||||    
T  39970148 atagcataaaaattagtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 39970233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24940330 - 24940274
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||| |||||| |||||| ||||||||||| |||||||||  ||||||||||    
T  24940330 ataggataaacatttgt-ttttttacttacattttgagacaaagaaaatgaatttttt 24940274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 29180576 - 29180656
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||||| ||||||||||||||||| |||||| ||||||||  | | || |||||| |||| ||||||| | ||||||||||    
T  29180576 ataaaagtttgtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 29180656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32012486 - 32012531
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| |||||| |||||||||    
T  32012486 atagcataaaagtttgtcttttttgcttatattttgagacaaagaa 32012531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 41414788 - 41414829
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| |||||||||||| |||| ||||||||||||||||    
T  41414788 gataaaagtttgtcttttttacttatattttgggacaaagaa 41414829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47806859 - 47806802
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||| |||||||||  ||||||||||||| |||||| |||||||||  ||||||||||    
T  47806859 atagcataaaaattgatcttttttgcttatattttgagacaaagaatatgaatttttt 47806802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 47867852 - 47867811
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  47867852 gataaaagtttttcttttttgcttatattttgggacaaagaa 47867811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48793832 - 48793877
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| |||||||||| |||||| ||||||||||||||||    
T  48793832 atagaataaaagtttgtcttttatgcttatattttgggacaaagaa 48793877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 8225407 - 8225354
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  8225407 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaatttttt 8225354  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42273597 - 42273552
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  42273597 ataggataaaagtttgtcttttttgcttatattttgggacaaagaa 42273552  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 39505450 - 39505502
Alignment:
Q  6 ataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  39505450 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaatttttt 39505502  T

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Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17351329 - 17351283
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttac-attttgggacaaagaa 46  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  17351329 ataggataaaagtttgtcttttttgcttacaattttgggacaaagaa 17351283  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 9957633 - 9957674
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  9957633 gataaaagtttgtcttttttgcttatattttgggacaaagaa 9957674  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12730200 - 12730245
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  12730200 ataggataaaagtttgtcttttttacttatattttgggacaaagaa 12730245  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32433621 - 32433576
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||    
T  32433621 atagtataaaaatttgtcttttttgcttatattttgagacaaagaa 32433576  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 34425275 - 34425233
Alignment:
Q  4 ggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||    
T  34425275 ggataaaagtttgtcttttttgcttatattttaggacaaagaa 34425233  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 104433 - 104478
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| |||||||||||| |||| ||||||||||| ||||    
T  104433 ataggataaaagtttgtcttttttacttatattttgggacagagaa 104478  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 842752 - 842793
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  842752 gataaaagtttatcttttttgcttatattttgggacaaagaa 842793  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 7071182 - 7071129
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    ||||||| ||||||||||| ||||| ||||||| |||||||| |||| ||||||    
T  7071182 gataaaagtttgtctttttcgcttatattttggtacaaagaaagtgagtttttt 7071129  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 11262070 - 11262111
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| |||||||||||| |||| ||||||||||||||||    
T  11262070 gataaaagtttgtcttttttacttatattttgggacaaagaa 11262111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12793020 - 12793065
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||||||| ||||| ||||||||||| ||||||| ||||||||    
T  12793020 ataggataaaagtttgtattttttgcttatattttggaacaaagaa 12793065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 20643958 - 20643917
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||    
T  20643958 gataaaagtttgtcttttttgcttatattttgggataaagaa 20643917  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25840811 - 25840766
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| |||||| |||||||||| ||||||||||||||||    
T  25840811 atagaataaaagtttgtcatttttgcttatattttgggacaaagaa 25840766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 37522776 - 37522817
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| |||||||||| |||||    
T  37522776 gataaaagtttgtcttttttgcttatattttgggacgaagaa 37522817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 37562948 - 37562989
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| |||||||||| |||||    
T  37562948 gataaaagtttgtcttttttgcttatattttgggacgaagaa 37562989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38130329 - 38130374
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||||||| |||||||| |||| ||||||||||||||||    
T  38130329 atagaataaaaatttatcttttttacttatattttgggacaaagaa 38130374  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 77932 - 77891
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  77932 gataaaagtttgtcttttttgcttatattttgggacaaagaa 77891  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 157742 - 157697
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  157742 atagaataaaagtttgtcttttttgcttatattttgggacaaagaa 157697  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2851525 - 2851468
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaagaaggtgaatttttt 58  Q
    |||||||||||||||||||||||   ||| | |||||||||||||| |||||||||||    
T  2851525 ataggataaaaatttgtctttttcatttataatttgggacaaagaaagtgaatttttt 2851468  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 3095907 - 3095948
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  3095907 gataaaagtttgtcttttttgcttatattttgggacaaagaa 3095948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 21542393 - 21542352
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  21542393 gataaaagtttgtcttttttgcttatattttgggacaaagaa 21542352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12461607 - 12461663
Alignment:
Q  13 tttgtcttttttgcttacattttgggacaaagaaggtgaattttttccttacatttt 69  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||||  |||||||||    
T  12461607 tttgtcttttttgcttacatttttggataaagaaagtgagttttttgtttacatttt 12461663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10227876 - 10227791
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| |||||| || |||||||||||||| |||||| ||||||||  | | ||||||||| |||| ||||||| | ||||||||||    
T  10227876 atagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagaattttttgcttatattttaggacggagggagta 10227791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 35129241 - 35129282
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaa 46  Q
    ||||||| ||||||||||||||||  ||||||||||||||||    
T  35129241 gataaaagtttgtcttttttgcttgtattttgggacaaagaa 35129282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 3614 - 3656
Alignment:
Q  5 gataaaaatttgtcttttttgcttacattttgggacaaagaag 47  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||    
T  3614 gataaaagtttatcttttttgcttatattttgggacaaagaag 3656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4595 - 4510
Alignment:
Q  1 ataggataaaaatttgtcttttttgcttacattttgggacaaaga--aggtgaattttttccttacattttagaatggagggagta 84  Q
    |||| |||||| || |||||||||||||| |||||| ||||||||  | | ||||||||| |||| ||||||| | ||||||||||    
T  4595 atagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagaattttttgcttatattttaggacggagggagta 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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